##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2139010_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 11101271 Sequences flagged as poor quality 0 Sequence length 19-101 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.49990483071713 34.0 31.0 34.0 31.0 34.0 2 32.65232989988264 34.0 31.0 34.0 31.0 34.0 3 32.6450764961958 34.0 31.0 34.0 31.0 34.0 4 36.20044164312357 37.0 35.0 37.0 35.0 37.0 5 36.13945223028967 37.0 35.0 37.0 35.0 37.0 6 36.164435225480034 37.0 36.0 37.0 35.0 37.0 7 36.11646143941536 37.0 36.0 37.0 35.0 37.0 8 36.102429262379054 37.0 36.0 37.0 35.0 37.0 9 37.812510297244344 39.0 38.0 39.0 35.0 39.0 10-11 37.755779135560246 39.0 38.0 39.0 35.0 39.0 12-13 37.72739076453498 39.0 38.0 39.0 35.0 39.0 14-15 39.077778121081806 40.0 38.0 41.0 36.0 41.0 16-17 39.05599642599482 40.0 38.0 41.0 36.0 41.0 18-19 38.97746703958492 40.0 38.5 41.0 35.0 41.0 20-21 39.03816124791097 40.0 39.0 41.0 35.0 41.0 22-23 38.967565769095316 40.0 38.0 41.0 35.0 41.0 24-25 38.89809684111435 40.0 38.0 41.0 35.0 41.0 26-27 38.822112164072934 40.0 38.0 41.0 35.0 41.0 28-29 38.607989634791615 40.0 38.0 41.0 34.5 41.0 30-31 38.54074945568412 40.0 38.0 41.0 34.0 41.0 32-33 38.479559295192715 40.0 38.0 41.0 34.0 41.0 34-35 38.293497481587245 40.0 38.0 41.0 34.0 41.0 36-37 38.41072557123069 40.0 38.0 41.0 34.0 41.0 38-39 38.53421623626056 40.0 38.0 41.0 34.0 41.0 40-41 38.53355096290829 40.0 38.0 41.0 34.0 41.0 42-43 38.40858597809184 40.0 38.0 41.0 34.0 41.0 44-45 38.35063046722317 40.0 38.0 41.0 34.0 41.0 46-47 38.37436453045923 40.0 38.0 41.0 34.0 41.0 48-49 38.25545219962447 40.0 38.0 41.0 33.0 41.0 50-51 38.200420130403266 40.0 38.0 41.0 33.0 41.0 52-53 38.13559458557599 40.0 37.0 41.0 33.0 41.0 54-55 38.03916119628798 40.0 37.0 41.0 33.0 41.0 56-57 37.89468926981506 40.0 37.0 41.0 33.0 41.0 58-59 37.74797799391763 40.0 36.5 41.0 33.0 41.0 60-61 37.57830364326237 39.0 36.0 41.0 33.0 41.0 62-63 37.372970744416286 39.0 36.0 41.0 32.0 41.0 64-65 37.13964345093379 39.0 35.0 40.0 32.0 41.0 66-67 36.873347731429625 38.0 35.0 40.0 32.0 41.0 68-69 36.56914239923684 37.5 35.0 40.0 31.0 41.0 70-71 36.27674017674694 37.0 35.0 40.0 31.0 41.0 72-73 35.94937211238151 36.5 35.0 39.0 31.0 41.0 74-75 35.6184586837503 36.0 34.0 39.0 31.0 40.0 76-77 34.59598587440857 35.0 33.5 37.0 29.5 39.0 78-79 34.8982076321895 35.0 34.0 37.0 30.0 39.0 80-81 34.73222838828701 35.0 34.0 37.0 30.0 39.0 82-83 34.45827635396181 35.0 34.0 36.5 30.0 39.0 84-85 34.178371175662946 35.0 34.0 36.0 30.0 37.5 86-87 33.91655669848031 35.0 34.0 36.0 30.0 37.0 88-89 33.66445944403049 35.0 33.5 35.0 30.0 37.0 90-91 33.53233027110579 35.0 33.0 35.0 30.0 36.0 92-93 33.45274764270792 35.0 33.0 35.0 30.0 36.0 94-95 33.359174831719336 35.0 33.0 35.0 30.0 36.0 96-97 33.34341157267018 35.0 33.0 35.0 30.0 35.5 98-99 33.375075413866696 34.5 33.0 35.0 30.0 35.0 100-101 32.16818646745347 33.0 31.0 34.5 27.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 0.0 18 0.0 19 9.0 20 49.0 21 337.0 22 1447.0 23 5138.0 24 13371.0 25 27047.0 26 47451.0 27 74767.0 28 106717.0 29 142743.0 30 183840.0 31 230652.0 32 290474.0 33 374302.0 34 513143.0 35 734472.0 36 1209324.0 37 2349868.0 38 3235106.0 39 1497429.0 40 63584.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.145740249021934 22.12596197318307 15.666413332311228 24.061884445483763 2 13.441821211282926 22.367781130647113 41.69735159154298 22.49304606652698 3 16.63032072318714 27.39701039338745 31.670163738257678 24.30250514516773 4 11.725765395512976 19.429399597558977 39.893979545013565 28.950855461914482 5 12.511705912174762 38.44357579179529 36.29540803954301 12.74931025648694 6 28.400380894077777 39.56661993618916 19.289126836088442 12.743872333644621 7 25.129984323869824 33.51703826535989 24.2383042034045 17.114673207365783 8 23.548865916826756 37.550667881909135 21.717876981742716 17.182589219521397 9 24.907508071846753 17.214294728723523 22.154653187810837 35.723544011618884 10-11 23.299337498745636 27.515822075003726 29.74077631894464 19.444064107305998 12-13 24.26583161491102 25.155639878255347 29.81543639879697 20.76309210803667 14-15 21.406988289074985 26.525534313318367 27.527853149616018 24.53962424799063 16-17 20.81260692000746 29.645443774275027 28.19164695478577 21.350302350931745 18-19 20.91230835467136 28.832038428761543 29.937709370780464 20.317943845786633 20-21 21.648696500671946 27.94066505416138 29.88448146151154 20.52615698365513 22-23 21.36847950360552 27.90299989986234 29.70169383994849 21.026826756583645 24-25 21.175077631320818 28.062495792782972 29.716676655850232 21.04574992004598 26-27 21.154500781582165 28.16174670425716 29.664386319358936 21.019366194801744 28-29 21.11846245815151 28.17988746157599 29.596713722814787 21.104936357457714 30-31 21.299511511684553 28.13522544021986 29.586218334750143 20.979044713345445 32-33 21.150700181854933 28.236794296431434 29.51030936015593 21.1021961615577 34-35 21.3191928585895 28.271183238864705 29.45725116727259 20.952372735273205 36-37 21.324053983711053 28.24453038728371 29.410714490614744 21.020701138390496 38-39 21.201380986483777 28.338836336369322 29.441935812211028 21.017846864935873 40-41 21.345691869921957 28.23476947413473 29.32998433454117 21.089554321402147 42-43 21.34008772610297 28.3627636641881 29.02630735795807 21.27084125175086 44-45 21.464486379559432 28.461988801615302 28.843416173086787 21.230108645738476 46-47 21.415366349307973 28.493042256166063 28.63668155768612 21.454909836839846 48-49 21.42484246505849 28.63559597729342 28.496597077748966 21.442964479899125 50-51 21.479506971741216 28.62729886587764 28.398852779988704 21.494341382392438 52-53 21.534923621947833 28.610747353928318 28.307234332817554 21.5470946913063 54-55 21.540060012533942 28.545066186971596 28.337707745622133 21.577166054872333 56-57 21.55499855194994 28.616965372207794 28.29062133967169 21.537414736170582 58-59 21.50308975294754 28.690689020800846 28.303859499468643 21.502361726782972 60-61 21.59432013093525 28.65688855326678 28.297298196522974 21.451493119274993 62-63 21.575936453458564 28.716156185313213 28.227421507298274 21.480485853929952 64-65 21.542646795030432 28.663065190911922 28.203518781724856 21.59076923233279 66-67 21.59123855892583 28.64921713269502 28.109734590265557 21.649809718113598 68-69 21.526110180647027 28.62580096034945 28.184655648567432 21.663433210436096 70-71 21.51798503941045 28.49056880165657 28.224175509123572 21.767270649809408 72-73 21.602878488137538 28.547612048457065 28.192117516603936 21.657391946801457 74-75 21.510413837752193 28.59876069669808 28.161480991882286 21.729344473667446 76-77 21.58213153733857 28.559787874124776 28.109966321055712 21.748114267480943 78-79 21.54443702053165 28.534683393602844 28.117221755156063 21.80365783070944 80-81 21.568817977791007 28.571313681354727 28.09936807862554 21.760500262228724 82-83 21.568023876157145 28.589038364348628 28.191375413492864 21.651562346001366 84-85 21.644589066875564 28.583616165510794 28.136966080594927 21.63482868701871 86-87 21.570469435825704 28.59441957289675 28.15877019739234 21.676340793885203 88-89 21.58527270464291 28.532425179382642 28.110679963232588 21.77162215274186 90-91 21.57092935550088 28.59977953931375 28.15513424786381 21.67415685732156 92-93 21.615335496061356 28.53781994329627 28.181260367098908 21.66558419354346 94-95 21.45606607049745 28.667540786277755 28.185883411056555 21.690509732168238 96-97 21.408291848643167 28.709580900994524 28.22098708731301 21.6611401630493 98-99 21.658327349214627 29.25575933243765 28.263474327842385 20.82243899050534 100-101 22.071211143694804 32.018340204169185 25.55372751406231 20.356721138073702 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 3626.0 1 3024.0 2 3532.0 3 4911.5 4 6568.0 5 9573.5 6 11907.0 7 14069.5 8 15739.5 9 15784.5 10 14556.5 11 13522.0 12 15231.5 13 20693.0 14 33554.5 15 51081.5 16 64674.5 17 71412.0 18 72211.5 19 69091.0 20 64086.0 21 59390.0 22 58133.0 23 63880.0 24 76357.0 25 94721.0 26 117957.5 27 142862.0 28 170015.0 29 199270.5 30 227128.5 31 254999.5 32 284574.0 33 313904.5 34 339314.0 35 360272.0 36 383944.5 37 407116.0 38 422277.0 39 431908.5 40 440996.0 41 449278.5 42 452892.0 43 455875.5 44 457902.0 45 456533.0 46 452901.0 47 446236.0 48 437142.0 49 424868.5 50 408665.0 51 386618.5 52 360441.5 53 334392.5 54 309129.5 55 281744.0 56 253752.5 57 226358.0 58 198066.5 59 168434.5 60 137649.5 61 110272.5 62 86422.5 63 65432.5 64 48350.0 65 36043.0 66 27374.0 67 20613.0 68 15618.5 69 11241.5 70 7841.0 71 5606.5 72 3902.5 73 2609.5 74 1712.0 75 1140.0 76 731.5 77 472.0 78 310.5 79 215.0 80 165.0 81 116.5 82 82.0 83 52.5 84 32.5 85 25.0 86 21.0 87 21.5 88 22.0 89 17.5 90 11.0 91 7.0 92 4.5 93 2.0 94 1.0 95 1.0 96 1.0 97 1.0 98 0.5 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 7.026222492901939E-4 4 1.5313561843504226E-4 5 3.873430348651069E-4 6 1.9817550621005467E-4 7 0.0028555288849357882 8 5.134547206351417E-4 9 2.882552817600795E-4 10-11 8.107179799502237E-5 12-13 2.7023932665007456E-5 14-15 1.1710370821503231E-4 16-17 8.827818003902437E-4 18-19 2.2519943887506213E-5 20-21 0.0 22-23 0.0029684550970491123 24-25 0.007208633997197463 26-27 0.03586732030102949 28-29 0.2793088117068706 30-31 0.24356124432425513 32-33 0.2504611538255742 34-35 0.13118614414548668 36-37 0.02262499673371526 38-39 0.014336690565574435 40-41 0.007770207707134612 42-43 0.004582856493061977 44-45 0.005601354714967194 46-47 0.0012214237537775713 48-49 0.0017940853526826786 50-51 0.0024323619861257497 52-53 0.0012953948904985298 54-55 1.2175481414882499E-4 56-57 0.001365047210010451 58-59 0.0026842148948768344 60-61 0.011388894688788962 62-63 0.006856294683041709 64-65 0.0017581911891653144 66-67 0.001631224802578197 68-69 0.0024399263960717494 70-71 0.004148571596576994 72-73 0.003576690396977237 74-75 0.003830725878804796 76-77 0.0015576639654222315 78-79 8.170776194868436E-5 80-81 3.5253816184288887E-4 82-83 2.7857291774265455E-5 84-85 0.0 86-87 0.0 88-89 0.0 90-91 4.976910939115574E-4 92-93 0.008008728801450364 94-95 9.841597971205899E-4 96-97 0.0 98-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 197.0 20-21 710.0 22-23 1559.0 24-25 3917.0 26-27 5617.0 28-29 8883.0 30-31 19876.0 32-33 26741.0 34-35 38083.0 36-37 53403.0 38-39 63653.0 40-41 69212.0 42-43 82626.0 44-45 99156.0 46-47 98427.0 48-49 87236.0 50-51 78821.0 52-53 76550.0 54-55 82226.0 56-57 86586.0 58-59 86472.0 60-61 85206.0 62-63 84605.0 64-65 90459.0 66-67 95374.0 68-69 94509.0 70-71 94128.0 72-73 92002.0 74-75 94717.0 76-77 96082.0 78-79 101500.0 80-81 103039.0 82-83 101585.0 84-85 103676.0 86-87 108847.0 88-89 115896.0 90-91 122294.0 92-93 131017.0 94-95 148845.0 96-97 228592.0 98-99 946534.0 100-101 6992413.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 84.25228082506794 #Duplication Level Percentage of deduplicated Percentage of total 1 88.95701414727486 74.94831337295744 2 7.5507188153713045 12.72330564127575 3 1.9546012866071039 4.940388495007826 4 0.7179261875140819 2.4194767504842734 5 0.34855425594456757 1.468324552730716 6 0.16606768613532322 0.8394948796945497 7 0.09792685189375896 0.5775392438247472 8 0.05975870414927407 0.4027845698981434 9 0.03807467423079155 0.2887090331054065 >10 0.10849034792487824 1.3197916648712156 >50 7.392257843442076E-4 0.042526122336384135 >100 1.1073638606379322E-4 0.02171847036964044 >500 1.7080783752349644E-5 0.007627203443900666 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 9.007977555002485E-6 9.007977555002485E-6 2 0.0 9.007977555002485E-6 0.0 9.007977555002485E-6 1.801595511000497E-5 3 0.0 9.007977555002485E-6 0.0 2.702393266500746E-5 1.801595511000497E-5 4 0.0 3.603191022000994E-5 0.0 2.702393266500746E-5 2.702393266500746E-5 5 0.0 3.603191022000994E-5 0.0 2.702393266500746E-5 2.702393266500746E-5 6 6.30558428850174E-5 3.603191022000994E-5 0.0 2.702393266500746E-5 2.702393266500746E-5 7 6.30558428850174E-5 3.603191022000994E-5 0.0 2.702393266500746E-5 2.702393266500746E-5 8 6.30558428850174E-5 5.404786533001492E-5 0.0 2.702393266500746E-5 2.702393266500746E-5 9 6.30558428850174E-5 1.0809573066002984E-4 0.0 2.702393266500746E-5 5.404786533001492E-5 10-11 6.755983166251863E-5 1.0809573066002984E-4 0.0 4.5039887775012426E-5 5.404786533001492E-5 12-13 7.206382044001988E-5 1.0809573066002984E-4 0.0 6.755983166251863E-5 5.404786533001492E-5 14-15 7.206382044001988E-5 1.7565556232254848E-4 0.0 1.0809573066002984E-4 6.30558428850174E-5 16-17 1.5313561843504226E-4 1.801595511000497E-4 0.0 1.1710370821503232E-4 6.30558428850174E-5 18-19 1.5313561843504226E-4 1.9367151743255342E-4 0.0 1.48631629657541E-4 6.30558428850174E-5 20-21 1.5313561843504226E-4 2.1619146132005964E-4 0.0 1.6214359599004473E-4 6.30558428850174E-5 22-23 1.6214359599004476E-4 2.3871140520756586E-4 0.0 1.981755062100547E-4 8.557578677252362E-5 24-25 1.7115157354504723E-4 2.6573533787257336E-4 0.0 2.432153939850671E-4 1.1710370821503232E-4 26-27 1.7115157354504723E-4 2.792473042050771E-4 0.0 2.882552817600795E-4 1.261116857700348E-4 28-29 1.7115157354504723E-4 2.792473042050771E-4 0.0 5.224626981901442E-4 1.261116857700348E-4 30-31 1.7115157354504723E-4 3.468071358675957E-4 0.0 0.0013106607342528616 1.261116857700348E-4 32-33 1.7115157354504723E-4 3.5131112464509696E-4 0.0 0.002963624615595818 1.261116857700348E-4 34-35 1.7115157354504723E-4 4.1887095630761557E-4 0.0 0.005283178836008958 1.4412764088003976E-4 36-37 1.7115157354504723E-4 4.954387655251367E-4 0.0 0.008688194351799898 1.5313561843504226E-4 38-39 1.7115157354504723E-4 5.359746645226479E-4 0.0 0.014183060660351413 1.5313561843504226E-4 40-41 1.7115157354504723E-4 5.855185410751616E-4 0.0 0.020281461465088097 1.5313561843504226E-4 42-43 1.7115157354504723E-4 6.170464625176702E-4 0.0 0.026289782494274754 1.6214359599004476E-4 44-45 1.7565556232254848E-4 7.251421931777001E-4 0.0 0.03337005285250671 1.7565556232254848E-4 46-47 1.801595511000497E-4 8.017100023952212E-4 0.0 0.04135112096623891 1.8466353987755095E-4 48-49 1.801595511000497E-4 8.017100023952212E-4 0.0 0.048917822112441 1.891675286550522E-4 50-51 2.432153939850671E-4 9.09805733055251E-4 0.0 0.0565340671351956 1.891675286550522E-4 52-53 2.432153939850671E-4 9.09805733055251E-4 0.0 0.06385755288741263 2.0718348376505717E-4 54-55 2.432153939850671E-4 9.143097218327523E-4 0.0 0.07190167684402984 2.297034276525634E-4 56-57 2.432153939850671E-4 9.27821688165256E-4 0.0 0.07841444461629664 2.3871140520756586E-4 58-59 2.432153939850671E-4 9.368296657202586E-4 0.0 0.0840714545208382 2.4771938276256836E-4 60-61 2.432153939850671E-4 9.63853598385266E-4 0.0 0.08927806554762963 2.522233715400696E-4 62-63 2.792473042050771E-4 0.0010133974749377797 0.0 0.09425046915799101 2.612313490950721E-4 64-65 2.837512929825783E-4 0.0010899652841553009 0.0 0.09952914400522246 2.612313490950721E-4 66-67 2.882552817600795E-4 0.0010899652841553009 0.0 0.10486637070656143 2.6573533787257336E-4 68-69 2.882552817600795E-4 0.0010989732617103032 0.0 0.11034772504878046 2.702393266500746E-4 70-71 2.97263259315082E-4 0.0011124852280428072 0.0 0.11550028821024187 2.792473042050771E-4 72-73 3.062712368700845E-4 0.0011169892168203083 0.0 0.11966197384065302 2.97263259315082E-4 74-75 3.062712368700845E-4 0.001153021127040318 0.0 0.12310752525544147 2.97263259315082E-4 76-77 3.062712368700845E-4 0.001184549048482827 0.0 0.12618374959047482 2.97263259315082E-4 78-79 3.107752256475858E-4 0.0011980610148153307 0.0 0.1289491986998606 2.97263259315082E-4 80-81 3.1978320320258824E-4 0.0011980610148153307 0.0 0.13002114802890588 3.0176724809258325E-4 82-83 3.287911807575907E-4 0.0012025650035928318 0.0 0.13035444319844097 3.15279214425087E-4 84-85 3.5131112464509696E-4 0.0012160769699253355 0.0 0.13065170645775606 3.15279214425087E-4 86-87 3.603191022000994E-4 0.0012521088801453455 0.0 0.1307958340986361 3.2428719198008947E-4 88-89 3.603191022000994E-4 0.0013016527566978593 0.0 0.1308318660088561 3.2428719198008947E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 14670 0.0 47.464275 1 GTATCAA 26370 0.0 35.45031 1 ATCAACG 31715 0.0 28.692781 3 TCAACGC 31815 0.0 28.683226 4 CAACGCA 32630 0.0 27.979803 5 TATCAAC 33365 0.0 27.568909 2 AACGCAG 33390 0.0 27.484018 6 ACGCAGA 38245 0.0 23.916689 7 CGCAGAG 38440 0.0 23.783583 8 GCAGAGT 44845 0.0 20.2721 9 GTACATG 28815 0.0 20.077662 1 TACATGG 28910 0.0 19.508064 2 GAGTACT 28235 0.0 19.010923 12-13 AGAGTAC 41220 0.0 18.829283 10-11 ACATGGG 29560 0.0 18.35484 3 CAGAGTA 44675 0.0 17.742123 10-11 AGTACTT 31460 0.0 17.170984 12-13 GTACTTT 32070 0.0 16.778143 14-15 GTGGTAT 7570 0.0 16.405088 1 CATGGGG 21100 0.0 16.215889 4 >>END_MODULE