##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2139006_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 10706359 Sequences flagged as poor quality 0 Sequence length 19-101 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.48478245498773 34.0 31.0 34.0 31.0 34.0 2 32.6287609074196 34.0 31.0 34.0 31.0 34.0 3 32.62417830375387 34.0 31.0 34.0 31.0 34.0 4 36.188386453321804 37.0 35.0 37.0 35.0 37.0 5 36.12329681827408 37.0 35.0 37.0 35.0 37.0 6 36.1474932794613 37.0 36.0 37.0 35.0 37.0 7 36.09694556291266 37.0 36.0 37.0 35.0 37.0 8 36.083996155929384 37.0 36.0 37.0 35.0 37.0 9 37.78870641270296 39.0 38.0 39.0 35.0 39.0 10-11 37.728671904239334 39.0 37.5 39.0 35.0 39.0 12-13 37.69959483891769 39.0 37.0 39.0 35.0 39.0 14-15 39.03663304210143 40.0 38.0 41.0 36.0 41.0 16-17 39.01298546032316 40.0 38.0 41.0 36.0 41.0 18-19 38.932629197283596 40.0 38.5 41.0 35.0 41.0 20-21 38.99046596732508 40.0 38.0 41.0 35.0 41.0 22-23 38.920933807941765 40.0 38.0 41.0 35.0 41.0 24-25 38.84742040373492 40.0 38.0 41.0 35.0 41.0 26-27 38.76621675779322 40.0 38.0 41.0 35.0 41.0 28-29 38.55081071243602 40.0 38.0 41.0 34.5 41.0 30-31 38.48346209800456 40.0 38.0 41.0 34.0 41.0 32-33 38.416601652552586 40.0 38.0 41.0 34.0 41.0 34-35 38.22929420347129 40.0 38.0 41.0 34.0 41.0 36-37 38.36184620850883 40.0 38.0 41.0 34.0 41.0 38-39 38.48301677774995 40.0 38.0 41.0 34.0 41.0 40-41 38.48021895144133 40.0 38.0 41.0 34.0 41.0 42-43 38.353038513118214 40.0 38.0 41.0 34.0 41.0 44-45 38.291645766408266 40.0 38.0 41.0 33.0 41.0 46-47 38.306111313129904 40.0 38.0 41.0 33.0 41.0 48-49 38.18076340880406 40.0 38.0 41.0 33.0 41.0 50-51 38.1235199439499 40.0 37.5 41.0 33.0 41.0 52-53 38.04918300813989 40.0 37.0 41.0 33.0 41.0 54-55 37.941020634496525 40.0 37.0 41.0 33.0 41.0 56-57 37.789477207542376 40.0 36.5 41.0 33.0 41.0 58-59 37.63511499960757 39.5 36.0 41.0 33.0 41.0 60-61 37.45718980474564 39.0 36.0 41.0 32.5 41.0 62-63 37.24158742163083 39.0 35.0 40.5 32.0 41.0 64-65 36.999816959976215 38.5 35.0 40.0 32.0 41.0 66-67 36.72312465528782 38.0 35.0 40.0 31.5 41.0 68-69 36.41133105299481 37.0 35.0 40.0 31.0 41.0 70-71 36.115524214364065 37.0 35.0 39.5 31.0 41.0 72-73 35.78842523658508 36.5 34.5 39.0 31.0 40.5 74-75 35.462895778083855 36.0 34.0 39.0 31.0 40.0 76-77 34.442695401525555 35.0 33.5 37.0 29.5 39.0 78-79 34.75620083646973 35.0 34.0 37.0 30.0 39.0 80-81 34.603246972836885 35.0 34.0 37.0 30.0 39.0 82-83 34.340602637320046 35.0 34.0 36.0 30.0 38.5 84-85 34.074580032552255 35.0 34.0 36.0 30.0 37.0 86-87 33.826543072153385 35.0 34.0 35.5 30.0 37.0 88-89 33.584637433764556 35.0 33.0 35.0 29.0 36.5 90-91 33.462185507388114 35.0 33.0 35.0 29.0 36.0 92-93 33.39084058244582 35.0 33.0 35.0 29.0 36.0 94-95 33.30578348511384 35.0 33.0 35.0 29.0 36.0 96-97 33.29443015822131 35.0 33.0 35.0 29.5 35.0 98-99 33.32994402033273 34.0 33.0 35.0 30.0 35.0 100-101 32.13098438125578 33.0 31.0 34.5 27.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 1.0 19 12.0 20 59.0 21 329.0 22 1509.0 23 5201.0 24 13072.0 25 27091.0 26 47686.0 27 73990.0 28 106328.0 29 141702.0 30 182299.0 31 228951.0 32 288115.0 33 373370.0 34 517025.0 35 737402.0 36 1213511.0 37 2318809.0 38 3025141.0 39 1350412.0 40 54343.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.76914644838642 21.532166070650163 15.399492955541655 24.29919452542176 2 13.714485008395478 22.00604332434584 41.34425157983214 22.935220087426547 3 16.915582553589505 27.004731982887826 31.302101362058615 24.777584101464054 4 11.956876770504508 19.00688573248321 39.28680209233014 29.74943540468214 5 12.760178392028326 38.27010207440324 35.93364771497327 13.036071818595168 6 29.15188063889277 38.940160194875276 18.94344796795542 12.964511198276535 7 25.756110573877088 33.129607840335105 23.755404993035263 17.35887659275254 8 24.085314595961407 37.13913783879105 21.32250307856007 17.453044486687467 9 25.3733987838019 16.882307311152342 21.57588301857362 36.16841088647214 10-11 23.73613497416719 27.144884645506938 29.323256442791635 19.795723937534238 12-13 24.730100733157983 24.782060524704228 29.37770467270585 21.110134069431936 14-15 21.806874503565364 26.156034216722347 27.13146056207422 24.905630717638065 16-17 21.261021644012406 29.221651419283674 27.732850027462895 21.784476909241025 18-19 21.32572632662416 28.456741706971766 29.520114567442757 20.697417398961317 20-21 22.133801370101324 27.532626224938518 29.408000460302787 20.92557194465737 22-23 21.838569676481516 27.444380620334847 29.25512531006046 21.461924393123173 24-25 21.645221925932347 27.588597008088506 29.30436471535388 21.46181635062526 26-27 21.558613006594534 27.747391388328328 29.239899600461982 21.45409600461515 28-29 21.504699812560926 27.797033946100186 29.196933906680055 21.50133233465883 30-31 21.79448595815632 27.69223302820966 29.137519115796266 21.37576189783775 32-33 21.59397590253765 27.823729830249217 29.064047171534472 21.51824709567866 34-35 21.736727420065346 27.848740762727235 29.096406856959785 21.31812496024763 36-37 21.735666069831552 27.854740416416174 28.985929840144486 21.423663673607788 38-39 21.57978888706922 27.945973607581642 29.039033889881154 21.435203615467984 40-41 21.75454817374993 27.83973269594068 28.91052290754173 21.495196222767664 42-43 21.722114840811706 27.94024395017274 28.620730810592626 21.716910398422932 44-45 21.85339894757206 28.00500089735293 28.46266545672933 21.678934698345685 46-47 21.810190977874182 28.078258175100313 28.23563645563265 21.875914391392858 48-49 21.845167437585925 28.208860171598715 28.12490520115517 21.82106718966019 50-51 21.883313744039505 28.27278017638648 28.002269277556756 21.84163680201726 52-53 21.96314205715757 28.19216758657312 27.90884880278064 21.93584155348867 54-55 21.951848439767776 28.11989429754707 27.9448756700795 21.983381592605653 56-57 21.939080239077104 28.192222261800502 27.934559150415968 21.934138348706426 58-59 21.86718867516219 28.29504202244682 27.956842747621284 21.880926554769704 60-61 22.00733720733721 28.234301834301835 27.94957554957555 21.808785408785408 62-63 22.000977430111885 28.313766288688214 27.850527976406585 21.834728304793313 64-65 21.943889561871917 28.25543702484405 27.847536837158227 21.953136576125807 66-67 22.03163239145179 28.239710426682542 27.715554868227915 22.01310231363775 68-69 21.941310433398748 28.24159835066632 27.771133597667326 22.045957618267604 70-71 21.887424865307654 28.097668019581317 27.875412028958035 22.139495086152994 72-73 21.979457645717194 28.11863119108942 27.86450730953402 22.037403853659367 74-75 21.894647274614954 28.23277528740077 27.78039630327903 22.09218113470525 76-77 21.912967798866877 28.156417017903212 27.754813522551864 22.175801660678047 78-79 21.908093369748467 28.16953018587615 27.74544148471722 22.17693495965816 80-81 21.93136406711768 28.181569540474648 27.751758005657955 22.135308386749713 82-83 21.9555415942725 28.17298308312725 27.81605908966011 22.05541623294014 84-85 22.035174387828636 28.17828797122417 27.74835099322077 22.03818664772642 86-87 21.900432062786027 28.206733818326345 27.783585179790034 22.109248939097593 88-89 21.93939133449358 28.157192187091695 27.7343243731492 22.169092105265534 90-91 21.95953073655773 28.23577395591191 27.76867585292122 22.03601945460914 92-93 21.99035040108387 28.16001385433512 27.788192685012636 22.061443059568376 94-95 21.82928963909973 28.254067082286905 27.831571524233684 22.085071754379683 96-97 21.784416188390164 28.335613173443086 27.847440925741097 22.032529712425656 98-99 22.01143437250747 28.85880669607631 27.89902827346268 21.230730657953544 100-101 22.4757078471478 31.614498019881125 25.089747775894534 20.820046357076542 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 3520.0 1 2994.5 2 3547.5 3 4863.0 4 6194.0 5 8826.5 6 11019.5 7 13226.0 8 15170.0 9 15718.5 10 14863.5 11 13565.0 12 14514.0 13 18870.0 14 30105.5 15 46276.5 16 59218.0 17 66146.0 18 67326.0 19 64044.0 20 58972.0 21 54153.5 22 51848.5 23 55029.5 24 63726.0 25 77700.5 26 96665.5 27 118013.0 28 142498.0 29 170484.0 30 197834.0 31 224930.0 32 252455.5 33 278540.0 34 302835.0 35 324917.0 36 348791.5 37 371926.5 38 388367.0 39 399599.0 40 410228.0 41 420864.5 42 427507.5 43 431868.5 44 436258.5 45 439515.5 46 440094.5 47 437934.5 48 433318.0 49 425063.0 50 413751.0 51 397283.0 52 376144.5 53 353598.0 54 331054.0 55 306112.5 56 279433.0 57 250959.5 58 220369.5 59 188952.5 60 155961.0 61 126255.0 62 100145.0 63 76946.5 64 57865.0 65 44335.0 66 34817.0 67 26908.5 68 20563.5 69 14493.5 70 9757.5 71 6962.0 72 4951.0 73 3456.0 74 2325.0 75 1511.0 76 989.5 77 671.5 78 443.0 79 295.5 80 198.5 81 131.0 82 97.0 83 72.0 84 50.5 85 35.5 86 27.0 87 18.5 88 11.5 89 11.0 90 9.5 91 8.0 92 6.5 93 3.5 94 1.5 95 1.0 96 1.0 97 1.0 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 6.071158271453442E-4 4 1.681243829017876E-4 5 4.763524182217316E-4 6 2.2416584386905015E-4 7 0.0026713096394395145 8 5.137133921999066E-4 9 4.1097071375992527E-4 10-11 1.307634089236126E-4 12-13 3.269085223090315E-5 14-15 1.4010365241815635E-4 16-17 8.919932537289287E-4 18-19 1.4010365241815634E-5 20-21 0.0 22-23 0.0028631284035555665 24-25 0.006909820719352049 26-27 0.03509319866419618 28-29 0.2789175235046102 30-31 0.2436543194200017 32-33 0.25109014686659786 34-35 0.12983735182619244 36-37 0.02113117998436491 38-39 0.012455814991528194 40-41 0.005899664962138398 42-43 0.003090794396264587 44-45 0.0042777819724750706 46-47 6.520818349955455E-4 48-49 0.0012223179622148361 50-51 0.0019011749310973785 52-53 8.096049927183322E-4 54-55 4.5612061410255E-5 56-57 0.0010783119175135332 58-59 0.002098011142140255 60-61 0.009546298142121917 62-63 0.005112917873533785 64-65 8.4640146334349E-4 66-67 0.0014738403746502233 68-69 0.002453535034404223 70-71 0.0040683821514683185 72-73 0.0036249446357090164 74-75 0.0037498693795499456 76-77 0.001537869877349826 78-79 7.942473346335918E-5 80-81 3.7293454505313224E-4 82-83 1.741290543556032E-5 84-85 0.0 86-87 5.942764639480697E-6 88-89 0.0 90-91 4.5161889199943095E-4 92-93 0.008138016297213732 94-95 0.0011518181985261259 96-97 0.0 98-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 226.0 20-21 712.0 22-23 1637.0 24-25 5172.0 26-27 6063.0 28-29 9053.0 30-31 21196.0 32-33 27339.0 34-35 38321.0 36-37 54861.0 38-39 66494.0 40-41 70442.0 42-43 83444.0 44-45 98367.0 46-47 96969.0 48-49 86146.0 50-51 77927.0 52-53 76394.0 54-55 80757.0 56-57 84257.0 58-59 83507.0 60-61 82082.0 62-63 81758.0 64-65 87357.0 66-67 90791.0 68-69 91346.0 70-71 91772.0 72-73 89235.0 74-75 91397.0 76-77 93663.0 78-79 97943.0 80-81 100700.0 82-83 99214.0 84-85 100263.0 86-87 105982.0 88-89 111833.0 90-91 118183.0 92-93 125728.0 94-95 143133.0 96-97 219424.0 98-99 917493.0 100-101 6697778.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 83.9278947900279 #Duplication Level Percentage of deduplicated Percentage of total 1 89.17199532059695 74.8401784148392 2 7.293440259481669 12.242461735102626 3 1.9229073032617092 4.84156685517375 4 0.7464545704554215 2.5059344261887233 5 0.33023538904723637 1.3857980493950195 6 0.18236968040095 0.9183542009749168 7 0.10650125080602334 0.6256898040858012 8 0.06297387750237449 0.4228211972431512 9 0.043113336482056716 0.32565704114818145 >10 0.13746579775261655 1.7146905225602562 >50 0.0021929629634466056 0.1195036364130703 >100 3.316731290602268E-4 0.04875280065783155 >500 1.857812051535628E-5 0.008591316217491138 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 1.8680486989087515E-5 0.0 9.340243494543757E-6 0.0 3 0.0 1.8680486989087515E-5 0.0 1.8680486989087515E-5 0.0 4 0.0 5.604146096726254E-5 0.0 3.736097397817503E-5 0.0 5 0.0 5.604146096726254E-5 0.0 3.736097397817503E-5 0.0 6 9.340243494543757E-6 5.604146096726254E-5 0.0 3.736097397817503E-5 9.340243494543757E-6 7 9.340243494543757E-6 7.472194795635006E-5 0.0 3.736097397817503E-5 9.340243494543757E-6 8 9.340243494543757E-6 7.472194795635006E-5 0.0 3.736097397817503E-5 9.340243494543757E-6 9 9.340243494543757E-6 1.7746462639633138E-4 0.0 5.604146096726254E-5 9.340243494543757E-6 10-11 9.340243494543757E-6 1.7746462639633138E-4 0.0 7.472194795635006E-5 9.340243494543757E-6 12-13 9.340243494543757E-6 1.8213474814360325E-4 0.0 8.873231319816568E-5 9.340243494543757E-6 14-15 1.4010365241815636E-5 2.3350608736359392E-4 0.0 1.307634089236126E-4 1.4010365241815636E-5 16-17 1.8680486989087515E-5 2.3350608736359392E-4 0.0 1.307634089236126E-4 1.8680486989087515E-5 18-19 1.8680486989087515E-5 2.4284633085813767E-4 0.0 1.5878413940724386E-4 1.8680486989087515E-5 20-21 1.8680486989087515E-5 2.568566960999533E-4 0.0 1.8680486989087515E-4 2.3350608736359394E-5 22-23 1.8680486989087515E-5 3.0355791357267214E-4 0.0 2.148256003745064E-4 3.736097397817502E-5 24-25 1.8680486989087515E-5 3.222384005617596E-4 0.0 2.4751645260540957E-4 4.670121747271878E-5 26-27 1.8680486989087515E-5 3.362487658035752E-4 0.0 3.0822803531994393E-4 4.670121747271878E-5 28-29 1.8680486989087515E-5 3.362487658035752E-4 0.0 4.8102253996900343E-4 4.670121747271878E-5 30-31 1.8680486989087515E-5 3.7360973978175024E-4 0.0 0.0011068188541034352 4.670121747271878E-5 32-33 1.8680486989087515E-5 3.7360973978175024E-4 0.0 0.00253587610876863 6.0711582714534416E-5 34-35 1.8680486989087515E-5 4.2965120074901276E-4 0.0 0.004520677851359178 6.53817044618063E-5 36-37 1.8680486989087515E-5 4.8569266171627533E-4 0.0 0.007738391735229503 6.53817044618063E-5 38-39 1.8680486989087515E-5 5.137133921999066E-4 0.0 0.012875525657228569 6.53817044618063E-5 40-41 1.8680486989087515E-5 6.071158271453442E-4 0.0 0.018367588832020297 6.53817044618063E-5 42-43 1.8680486989087515E-5 6.257963141344317E-4 0.0 0.023724218476141142 6.53817044618063E-5 44-45 1.8680486989087515E-5 6.91178018596238E-4 0.0 0.029561870660230992 6.53817044618063E-5 46-47 1.8680486989087515E-5 7.378792360689568E-4 0.0 0.03645030023745701 7.005182620907819E-5 48-49 1.8680486989087515E-5 7.378792360689568E-4 0.0 0.04300248104887945 7.472194795635006E-5 50-51 1.8680486989087515E-5 8.359517927616661E-4 0.0 0.04935851674691648 7.472194795635006E-5 52-53 1.8680486989087515E-5 8.499621580034818E-4 0.0 0.055901357314844385 7.939206970362193E-5 54-55 1.8680486989087515E-5 8.546322797507537E-4 0.0 0.06296258139671947 8.40621914508938E-5 56-57 1.8680486989087515E-5 8.593024014980256E-4 0.0 0.0700985274265509 8.40621914508938E-5 58-59 1.8680486989087515E-5 8.686426449925693E-4 0.0 0.0761089741152898 8.40621914508938E-5 60-61 1.8680486989087515E-5 8.966633754762006E-4 0.0 0.08228754518693049 8.40621914508938E-5 62-63 1.8680486989087515E-5 9.386944712016475E-4 0.0 0.08774224738774405 8.40621914508938E-5 64-65 1.8680486989087515E-5 0.001074128001872532 0.0 0.09358923981532843 8.40621914508938E-5 66-67 1.8680486989087515E-5 0.0010881383671143478 0.0 0.09942689199941829 8.40621914508938E-5 68-69 1.8680486989087515E-5 0.0011021487323561634 0.0 0.10547469966213538 8.40621914508938E-5 70-71 1.8680486989087515E-5 0.0011208292193452508 9.340243494543757E-6 0.11139174391592885 8.40621914508938E-5 72-73 1.8680486989087515E-5 0.0011254993410925226 9.340243494543757E-6 0.1158190193323426 1.307634089236126E-4 74-75 1.8680486989087515E-5 0.001195551167301601 9.340243494543757E-6 0.11957846733889643 1.307634089236126E-4 76-77 1.8680486989087515E-5 0.001265602993510679 9.340243494543757E-6 0.12266074769209588 1.307634089236126E-4 78-79 1.8680486989087515E-5 0.001298293845741582 9.340243494543757E-6 0.12566830609733898 1.307634089236126E-4 80-81 1.8680486989087515E-5 0.001298293845741582 9.340243494543757E-6 0.12707401274326782 1.3543353067088448E-4 82-83 1.8680486989087515E-5 0.001298293845741582 9.340243494543757E-6 0.12754569503974228 1.4010365241815635E-4 84-85 1.8680486989087515E-5 0.0013169743327306697 9.340243494543757E-6 0.1278772736837986 1.4010365241815635E-4 86-87 1.8680486989087515E-5 0.0013543353067088447 9.340243494543757E-6 0.12801270721446945 1.4010365241815635E-4 88-89 1.8680486989087515E-5 0.001419717011170651 9.340243494543757E-6 0.12807341879718398 1.4010365241815635E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 14540 0.0 45.624603 1 GTATCAA 25895 0.0 35.429344 1 ATCAACG 31510 0.0 28.58668 3 TCAACGC 31545 0.0 28.554964 4 CAACGCA 32270 0.0 27.979698 5 TATCAAC 32940 0.0 27.644184 2 AACGCAG 33395 0.0 27.06274 6 ACGCAGA 38385 0.0 23.533367 7 CGCAGAG 38730 0.0 23.30078 8 GTACATG 30955 0.0 20.242237 1 GCAGAGT 45290 0.0 19.793585 9 TACATGG 31080 0.0 19.582836 2 ACATGGG 31560 0.0 19.041145 3 AGAGTAC 40175 0.0 18.82183 10-11 GAGTACT 26490 0.0 18.79354 12-13 CAGAGTA 43830 0.0 17.652351 10-11 ACCGAAC 1440 0.0 17.226656 8 CATGGGG 23385 0.0 17.119545 4 AGTACTT 29305 0.0 17.046633 12-13 GTACTTT 29795 0.0 16.652151 14-15 >>END_MODULE