##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138986_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 22328808 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 26.516932296609834 30.0 18.0 33.0 18.0 33.0 2 30.670855381084383 32.0 29.0 33.0 27.0 33.0 3 31.807325317141874 33.0 31.0 33.0 29.0 33.0 4 32.347397138261925 33.0 33.0 33.0 31.0 34.0 5 32.77845024239539 33.0 33.0 34.0 32.0 34.0 6 36.25532885588877 38.0 37.0 38.0 33.0 38.0 7 36.68244592366955 38.0 37.0 38.0 34.0 38.0 8 36.54303194330839 38.0 37.0 38.0 34.0 38.0 9 36.895217380166464 38.0 38.0 38.0 35.0 38.0 10-11 37.05226716535876 38.0 38.0 38.0 35.5 38.0 12-13 37.11163999439648 38.0 38.0 38.0 36.0 38.0 14-15 37.10159848210437 38.0 38.0 38.0 36.0 38.0 16-17 37.07486172123474 38.0 38.0 38.0 36.0 38.0 18-19 37.111723989027986 38.0 38.0 38.0 36.0 38.0 20-21 37.0908481840813 38.0 38.0 38.0 36.0 38.0 22-23 37.13226625553742 38.0 38.0 38.0 36.0 38.0 24-25 37.142192268587024 38.0 38.0 38.0 36.0 38.0 26-27 37.07549564987005 38.0 38.0 38.0 36.0 38.0 28-29 37.0646630896571 38.0 38.0 38.0 36.0 38.0 30-31 36.93527724711264 38.0 38.0 38.0 36.0 38.0 32-33 37.03382765842645 38.0 38.0 38.0 36.0 38.0 34-35 37.047554649279405 38.0 38.0 38.0 36.0 38.0 36-37 36.97032025371752 38.0 38.0 38.0 36.0 38.0 38-39 37.00888960362773 38.0 38.0 38.0 36.0 38.0 40-41 36.92707715324667 38.0 38.0 38.0 35.5 38.0 42-43 36.91186956435425 38.0 38.0 38.0 35.5 38.0 44-45 36.91058577254738 38.0 38.0 38.0 35.5 38.0 46-47 36.86961835419126 38.0 38.0 38.0 35.0 38.0 48-49 36.832377867254166 38.0 38.0 38.0 35.0 38.0 50-51 36.845082248500205 38.0 38.0 38.0 35.0 38.0 52-53 36.75644330532464 38.0 38.0 38.0 35.0 38.0 54-55 36.742091473391284 38.0 38.0 38.0 35.0 38.0 56-57 36.74366878991731 38.0 38.0 38.0 35.0 38.0 58-59 36.763749695799106 38.0 38.0 38.0 35.0 38.0 60-61 36.7610951997394 38.0 38.0 38.0 35.0 38.0 62-63 36.7682524808597 38.0 38.0 38.0 35.0 38.0 64-65 36.7229496533468 38.0 38.0 38.0 35.0 38.0 66-67 36.72911371953881 38.0 38.0 38.0 35.0 38.0 68-69 36.74270982786727 38.0 38.0 38.0 35.0 38.0 70-71 36.65424801059524 38.0 38.0 38.0 34.0 38.0 72-73 36.61295173358789 38.0 38.0 38.0 34.0 38.0 74-75 36.66380703198564 38.0 38.0 38.0 34.0 38.0 76-77 36.641331676235104 38.0 38.0 38.0 34.0 38.0 78-79 36.658981742639156 38.0 38.0 38.0 34.0 38.0 80-81 36.68128440513535 38.0 38.0 38.0 34.0 38.0 82-83 36.54886702362198 38.0 38.0 38.0 34.0 38.0 84-85 36.56646294561969 38.0 38.0 38.0 34.0 38.0 86-87 36.56480826330137 38.0 38.0 38.0 34.0 38.0 88-89 36.511359584159266 38.0 38.0 38.0 34.0 38.0 90-91 36.509311474099675 38.0 38.0 38.0 34.0 38.0 92-93 36.557362530739326 38.0 38.0 38.0 34.0 38.0 94-95 36.45523082725513 38.0 38.0 38.0 34.0 38.0 96-97 36.41316859393212 38.0 38.0 38.0 34.0 38.0 98-99 36.48349335671374 38.0 38.0 38.0 34.0 38.0 100 34.88278116234614 38.0 35.0 38.0 28.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 6.0 18 16.0 19 79.0 20 217.0 21 765.0 22 2548.0 23 7538.0 24 17267.0 25 33937.0 26 59196.0 27 93510.0 28 138833.0 29 194528.0 30 262653.0 31 344049.0 32 451761.0 33 605260.0 34 878557.0 35 1518562.0 36 4066427.0 37 1.3653099E7 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.36108277701165 19.08868131249998 14.43871970236835 22.111516208120022 2 14.041510858976439 21.184749315771807 42.91391192937841 21.859827895873348 3 16.68365369078367 27.841754920370132 31.242012560634674 24.23257882821152 4 11.746466716897741 19.50772293800905 40.15503201066532 28.590778334427885 5 13.0057797772825 37.85325066118194 36.317654144562326 12.82331541697323 6 28.096070161566182 39.27540057448661 19.947282447614977 12.681246816332232 7 24.977938813392996 33.4849312153161 24.890061305556483 16.64706866573442 8 23.48299112070828 37.10655311291136 22.315530681261624 17.09492508511874 9 25.251518128509144 17.052186574402 22.341085113007374 35.35521018408148 10-11 23.22896278207059 27.35011425598715 30.045576100614056 19.3753468613282 12-13 24.17305258749146 25.137311405069184 29.977207023321622 20.712428984117736 14-15 21.573590045648654 26.380985048552525 27.558725929301737 24.486698976497088 16-17 21.049910053416195 29.28358065508916 28.30067328269382 21.36583600880083 18-19 21.065934195860343 28.633709421479193 29.761850699777614 20.53850568288285 20-21 21.978254223759823 27.77196036682338 29.54134851293182 20.708436896484976 22-23 21.749680723777864 27.71817432448138 29.29618151684589 21.23596343489486 24-25 21.463377327621604 27.842014263497006 29.40442156985807 21.29018683902332 26-27 21.383901347328283 27.966132556935108 29.388254925300878 21.26171117043573 28-29 21.380767651131517 27.980667033361346 29.417740851043185 21.220824464463956 30-31 21.6153227638953 27.858300269004843 29.316650421958222 21.20972654514163 32-33 21.459055555751295 27.937361611399798 29.27676050406882 21.326822328780086 34-35 21.603671024087586 27.96021670956647 29.25002529027617 21.186086976069777 36-37 21.533361056552643 27.92983760954111 29.222826227956677 21.313975105949574 38-39 21.397714155154585 28.005973869334362 29.34381671528343 21.252495260227626 40-41 21.629236330207743 27.871918575350513 29.211224850030494 21.28762024441125 42-43 21.554238532434457 27.93274650694837 29.052442019092112 21.460572941525058 44-45 21.584500358417934 28.01610850186449 28.94766206949651 21.451729070221067 46-47 21.64672477422736 28.009254543346845 28.75316716930606 21.590853513119733 48-49 21.58709136596387 28.069267090423526 28.789060538347265 21.554581005265334 50-51 21.593081639821516 28.206034263976044 28.666804837937566 21.534079258264878 52-53 21.7589890380039 28.096568702358237 28.583009370181518 21.56143288945634 54-55 21.732806156073806 28.036560703115082 28.596450606297047 21.634182534514064 56-57 21.70310002744184 28.084598108073962 28.581971706893448 21.630330157590745 58-59 21.641076016379603 28.091343421818525 28.67013173270702 21.597448829094848 60-61 21.72007452834873 28.125784266164505 28.62583816861498 21.528303036871787 62-63 21.67408853655131 28.148113320935565 28.63096110962222 21.546837032890906 64-65 21.683893784875778 28.108454439870705 28.553073851930883 21.65457792332263 66-67 21.697193657012598 28.17641541936461 28.44007795913828 21.686312964484518 68-69 21.634841916253766 28.177077928293464 28.50428435400754 21.68379580144523 70-71 21.683594642009794 28.011988686897382 28.519712591301055 21.78470407979177 72-73 21.75241974634479 27.97970588418971 28.45100205015918 21.81687231930632 74-75 21.67696033032141 28.09775450264541 28.38217234357325 21.843112823459933 76-77 21.80532126046582 28.042937218872655 28.268065176918988 21.883676343742536 78-79 21.78644129208259 28.010011177460303 28.27503564656981 21.9285118838873 80-81 21.75974107460314 28.071858072072448 28.25726789785205 21.91113295547236 82-83 21.85267994965791 28.045884443140444 28.27144372632302 21.82999188087862 84-85 21.92660554363583 28.047731593965686 28.20545165706754 21.82021120533094 86-87 21.824584866928475 28.065784733895466 28.305234496985758 21.8043959021903 88-89 21.891549218600545 28.08789979057897 28.230888641635982 21.789662349184503 90-91 21.945802904606644 28.115623846761356 28.2032720349361 21.735301213695905 92-93 21.93362863692724 28.110219486419208 28.244460779108227 21.71169109754533 94-95 21.855717274851948 28.140061764720905 28.233687550750947 21.770533409676204 96-97 21.97044347261422 28.19949329594347 28.303753868073745 21.526309363368572 98-99 22.951970493253484 30.13303524285001 28.587727370609578 18.32726689328693 100 21.821335284831918 31.014686760478067 22.56853645821508 24.59544149647494 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 2391.0 1 2622.5 2 4628.5 3 6989.5 4 9021.0 5 13047.5 6 16482.0 7 19497.0 8 23219.5 9 25183.0 10 24597.5 11 24234.0 12 26971.0 13 32428.5 14 42412.5 15 54867.5 16 65243.5 17 72940.5 18 75900.0 19 73269.0 20 69512.0 21 68942.5 22 74664.0 23 89242.5 24 113114.5 25 148046.5 26 192361.0 27 243017.0 28 299766.0 29 361398.5 30 423108.5 31 482187.5 32 541778.5 33 598963.5 34 655380.0 35 709107.0 36 760319.5 37 805504.5 38 839200.0 39 867975.5 40 893391.5 41 915525.0 42 926114.0 43 931010.0 44 933824.5 45 935008.0 46 927100.5 47 908611.5 48 889820.5 49 863103.5 50 829571.0 51 786633.5 52 739676.0 53 690639.5 54 633542.5 55 576413.0 56 519655.5 57 459826.0 58 400932.0 59 341696.5 60 280167.5 61 221968.0 62 171545.5 63 128818.0 64 93379.0 65 67075.0 66 48578.5 67 35815.5 68 26852.0 69 19551.5 70 13970.5 71 9936.0 72 6789.5 73 4534.0 74 2963.5 75 1849.5 76 1122.5 77 638.0 78 384.0 79 233.5 80 157.5 81 110.0 82 78.0 83 50.0 84 28.0 85 17.5 86 14.0 87 11.5 88 9.5 89 7.0 90 5.5 91 3.5 92 2.5 93 1.5 94 1.0 95 2.5 96 3.0 97 3.0 98 1.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0027408538780932684 6 8.957038817298264E-6 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 1.1197418323231396E-5 26-27 0.0 28-29 5.1523010097905145E-5 30-31 0.0 32-33 3.815022742697048E-5 34-35 0.0 36-37 5.86047599642574E-4 38-39 4.75244330465264E-5 40-41 1.9776908740500295E-4 42-43 6.166713960033481E-5 44-45 6.477390576315491E-4 46-47 0.0 48-49 9.545427644703911E-5 50-51 4.685889591538033E-6 52-53 9.895232109632386E-5 54-55 0.0022056974183058005 56-57 0.0013323883148734388 58-59 1.4633534202179835E-4 60-61 3.863960014196189E-4 62-63 1.0453555206720147E-4 64-65 7.711419772995876E-4 66-67 0.0014306758964337666 68-69 3.4318582535109213E-4 70-71 6.921305508682101E-4 72-73 2.073238673132306E-4 74-75 1.5034787823340633E-4 76-77 1.7983720262923018E-5 78-79 0.0016662386618678303 80-81 0.0 82-83 0.0010339026980983284 84-85 1.8621302195111027E-4 86-87 2.6836320877809615E-6 88-89 5.6879151467067704E-5 90-91 0.0 92-93 0.0 94-95 5.581434964045373E-6 96-97 2.7774778290666453E-4 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 138.0 20-21 544.0 22-23 1238.0 24-25 1602.0 26-27 3558.0 28-29 8096.0 30-31 25460.0 32-33 35412.0 34-35 51282.0 36-37 84243.0 38-39 97017.0 40-41 101025.0 42-43 117091.0 44-45 142137.0 46-47 148562.0 48-49 138297.0 50-51 122536.0 52-53 115339.0 54-55 126518.0 56-57 131763.0 58-59 137956.0 60-61 137085.0 62-63 141189.0 64-65 150654.0 66-67 162825.0 68-69 166279.0 70-71 166456.0 72-73 154458.0 74-75 157316.0 76-77 165454.0 78-79 169342.0 80-81 169520.0 82-83 162602.0 84-85 162519.0 86-87 169424.0 88-89 175835.0 90-91 179198.0 92-93 182065.0 94-95 220184.0 96-97 708461.0 98-99 1579239.0 100-101 1.5458889E7 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 82.45265418298659 #Duplication Level Percentage of deduplicated Percentage of total 1 88.68344227061398 73.12185197295791 2 7.317827355299834 12.067485765946733 3 2.1232336384253743 5.251987468163153 4 0.8444437306948271 2.7850650761588662 5 0.3893259840881838 1.605048036523698 6 0.2165480834497928 1.0712978543204572 7 0.12663739501091162 0.7309112536228277 8 0.07802610863647255 0.5146767802117772 9 0.05120195416003891 0.37995633178657384 >10 0.16470474012932626 2.0822680642969735 >50 0.0033748519113421115 0.18198790957156571 >100 0.0011600907381434412 0.15408657602919343 >500 5.277971695643462E-5 0.027825463434991284 >1k 2.1017124780297808E-5 0.02555144697530195 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 1.7914077634596527E-5 0.0 8.957038817298264E-6 0.0 3 0.0 2.2392597043245658E-5 0.0 1.3435558225947395E-5 0.0 4 0.0 4.030667467784218E-5 0.0 2.2392597043245658E-5 0.0 5 0.0 4.926371349514045E-5 0.0 2.687111645189479E-5 0.0 6 4.030667467784218E-5 5.374223290378958E-5 0.0 2.687111645189479E-5 0.0 7 4.030667467784218E-5 5.374223290378958E-5 0.0 5.822075231243871E-5 4.478519408649132E-6 8 4.4785194086491317E-5 6.269927172108784E-5 0.0 7.165631053838611E-5 8.957038817298264E-6 9 4.4785194086491317E-5 1.1644150462487743E-4 0.0 8.957038817298263E-5 8.957038817298264E-6 10-11 4.4785194086491317E-5 1.1644150462487743E-4 0.0 9.404890758163176E-5 8.957038817298264E-6 12-13 4.4785194086491317E-5 1.231592837378511E-4 0.0 9.404890758163176E-5 8.957038817298264E-6 14-15 4.4785194086491317E-5 1.70183737528667E-4 0.0 1.052452061032546E-4 1.3435558225947395E-5 16-17 7.165631053838611E-5 1.836192957546144E-4 0.0 1.1644150462487743E-4 2.2392597043245658E-5 18-19 7.83740896513598E-5 2.0153337338921093E-4 0.0 1.2539854344217568E-4 3.3588895564868484E-5 20-21 9.852742699028089E-5 2.2392597043245657E-4 0.0 1.567481793027196E-4 3.5828155269193055E-5 22-23 1.1420224492055285E-4 2.463185674757022E-4 0.0 1.6794447782434243E-4 4.926371349514045E-5 24-25 1.3435558225947394E-4 2.6871116451894787E-4 0.0 1.8585855545893894E-4 5.374223290378958E-5 26-27 1.5003040018974592E-4 2.8662524215354444E-4 0.0 2.2616523013678115E-4 5.598149260811415E-5 28-29 1.567481793027196E-4 2.8886450185786896E-4 0.0 3.806741497351762E-4 5.822075231243871E-5 30-31 1.567481793027196E-4 3.3141043624003577E-4 0.0 0.0010121453863547038 6.046001201676328E-5 32-33 1.70183737528667E-4 3.3141043624003577E-4 0.0 0.002727418319867321 6.269927172108784E-5 34-35 1.8809781516326352E-4 3.784348900308516E-4 0.0 0.005338395135109765 7.613482994703524E-5 36-37 1.9257633457191265E-4 4.366556423432903E-4 0.0 0.009796761206419976 7.613482994703524E-5 38-39 1.9481559427623723E-4 4.5904823938653597E-4 0.0 0.02364434321796309 7.83740896513598E-5 40-41 2.104904122065092E-4 4.859193558384308E-4 0.0 0.0393415537452783 8.285260906000893E-5 42-43 2.104904122065092E-4 5.217475111076238E-4 0.0 0.04880242599604959 8.50918687643335E-5 44-45 2.104904122065092E-4 5.598149260811415E-4 0.0 0.06040179126445083 8.50918687643335E-5 46-47 2.2392597043245657E-4 5.77729003715738E-4 0.0 0.07380152133512904 8.957038817298263E-5 48-49 2.2392597043245657E-4 5.822075231243871E-4 0.0 0.08706689582354776 9.18096478773072E-5 50-51 2.4407930777137768E-4 6.269927172108784E-4 0.0 0.10021358954763729 9.404890758163176E-5 52-53 2.5079708688435136E-4 6.44906794845475E-4 0.0 0.13783539183999433 9.628816728595634E-5 54-55 2.552756062930005E-4 6.874527292276417E-4 0.0 0.1851330353147378 1.0076668669460547E-4 56-57 2.575148659973251E-4 7.098453262708873E-4 0.0 0.2475367247548548 1.052452061032546E-4 58-59 2.642326451102987E-4 7.299986636098085E-4 0.0 0.2936296465086716 1.0748446580757916E-4 60-61 2.9110376156219354E-4 7.479127412444049E-4 0.0 0.3176501853569613 1.0748446580757916E-4 62-63 3.04539319788141E-4 7.523912606530541E-4 0.0 0.33587999860986756 1.1196298521622828E-4 64-65 3.112570989011146E-4 8.285260906000894E-4 0.0 0.34129452857492437 1.1196298521622828E-4 66-67 3.246926571270621E-4 8.486794279390105E-4 0.0 0.34667099112500765 1.1196298521622828E-4 68-69 3.336496959443603E-4 8.576364667563087E-4 0.0 0.351848159561406 1.1420224492055285E-4 70-71 3.3812821535300944E-4 8.710720249822561E-4 0.0 0.35648790566876654 1.2092002403352655E-4 72-73 3.448459944659831E-4 8.800290637995543E-4 0.0 0.3603595856975437 1.3211632255514936E-4 74-75 3.470852541703077E-4 9.113786996600983E-4 0.0 0.3630287832650986 1.3435558225947394E-4 76-77 3.515637735789568E-4 9.53924634042265E-4 0.0 0.36573156972821835 1.3435558225947394E-4 78-79 3.538030332832814E-4 9.763172310855107E-4 0.0 0.3673595115332623 1.3435558225947394E-4 80-81 3.627600721005797E-4 9.807957504941599E-4 0.0 0.3678319953308748 1.4107336137244764E-4 82-83 3.6499933180490426E-4 9.830350101984846E-4 0.0 0.36824401911647053 1.4779114048542135E-4 84-85 3.7171711091787794E-4 9.987098281287565E-4 0.0 0.36846346656749435 1.4779114048542135E-4 86-87 3.7171711091787794E-4 0.0010390165028065985 0.0 0.36856423325418897 1.5003040018974592E-4 88 3.7619563032652704E-4 0.0010793231774844406 0.0 0.3685776688124149 1.567481793027196E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 25395 0.0 50.65321 1 GTATCAA 46725 0.0 38.344326 1 TCAACGC 54300 0.0 31.97637 4 ATCAACG 54390 0.0 31.899433 3 CAACGCA 55715 0.0 31.140808 5 TATCAAC 57830 0.0 30.333334 2 AACGCAG 57635 0.0 30.193298 6 ACGCAGA 64920 0.0 26.751478 7 CGCAGAG 66695 0.0 26.052582 8 GCAGAGT 80220 0.0 21.703588 9 GTACATG 63830 0.0 21.633469 1 TACATGG 64420 0.0 20.65095 2 ACATGGG 63260 0.0 20.285946 3 GAGTACT 45360 0.0 19.714962 12-13 AGAGTAC 72370 0.0 19.206503 10-11 CAGAGTA 79320 0.0 18.866323 10-11 CATGGGG 43210 0.0 18.186285 4 GTGGTAT 12710 0.0 16.93063 1 GTACTTT 52615 0.0 16.84763 14-15 AGTACTT 51125 0.0 16.294767 12-13 >>END_MODULE