##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138984_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 16916004 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 26.39952449762958 30.0 18.0 33.0 18.0 33.0 2 30.643929441019285 32.0 29.0 33.0 27.0 33.0 3 31.7677617006948 33.0 31.0 33.0 29.0 33.0 4 32.3069549404221 33.0 33.0 33.0 31.0 34.0 5 32.75217480440416 33.0 33.0 34.0 32.0 34.0 6 36.242163929495405 38.0 37.0 38.0 33.0 38.0 7 36.66150605071978 38.0 37.0 38.0 34.0 38.0 8 36.51793006196972 38.0 37.0 38.0 34.0 38.0 9 36.867525510161855 38.0 38.0 38.0 35.0 38.0 10-11 37.03089857983008 38.0 38.0 38.0 35.5 38.0 12-13 37.09634512382475 38.0 38.0 38.0 36.0 38.0 14-15 37.08331426854711 38.0 38.0 38.0 36.0 38.0 16-17 37.05297433129006 38.0 38.0 38.0 36.0 38.0 18-19 37.09099220477839 38.0 38.0 38.0 36.0 38.0 20-21 37.06861045127109 38.0 38.0 38.0 36.0 38.0 22-23 37.10845663250609 38.0 38.0 38.0 36.0 38.0 24-25 37.118669324750584 38.0 38.0 38.0 36.0 38.0 26-27 37.05294727187938 38.0 38.0 38.0 36.0 38.0 28-29 37.042124634862816 38.0 38.0 38.0 36.0 38.0 30-31 36.91005829120736 38.0 38.0 38.0 35.5 38.0 32-33 37.009503360107956 38.0 38.0 38.0 36.0 38.0 34-35 37.02162091952544 38.0 38.0 38.0 36.0 38.0 36-37 36.94409875401399 38.0 38.0 38.0 36.0 38.0 38-39 36.97918183213084 38.0 38.0 38.0 36.0 38.0 40-41 36.90027105292914 38.0 38.0 38.0 35.5 38.0 42-43 36.88728522878688 38.0 38.0 38.0 35.0 38.0 44-45 36.885383884599676 38.0 38.0 38.0 35.0 38.0 46-47 36.84346366273297 38.0 38.0 38.0 35.0 38.0 48-49 36.808137473558816 38.0 38.0 38.0 35.0 38.0 50-51 36.82078866176112 38.0 38.0 38.0 35.0 38.0 52-53 36.72691472727627 38.0 38.0 38.0 35.0 38.0 54-55 36.71156158877835 38.0 38.0 38.0 35.0 38.0 56-57 36.711162808955834 38.0 38.0 38.0 35.0 38.0 58-59 36.72903197878296 38.0 38.0 38.0 35.0 38.0 60-61 36.723937329934635 38.0 38.0 38.0 35.0 38.0 62-63 36.727212362255486 38.0 38.0 38.0 35.0 38.0 64-65 36.68112086928876 38.0 38.0 38.0 34.5 38.0 66-67 36.68597980094697 38.0 38.0 38.0 34.0 38.0 68-69 36.695002480531926 38.0 38.0 38.0 34.5 38.0 70-71 36.604649886473794 38.0 38.0 38.0 34.0 38.0 72-73 36.55751810542867 38.0 38.0 38.0 34.0 38.0 74-75 36.60735601034774 38.0 38.0 38.0 34.0 38.0 76-77 36.582313098411376 38.0 38.0 38.0 34.0 38.0 78-79 36.59641419602917 38.0 38.0 38.0 34.0 38.0 80-81 36.61382643388705 38.0 38.0 38.0 34.0 38.0 82-83 36.479134304956304 38.0 38.0 38.0 34.0 38.0 84-85 36.49709547917745 38.0 38.0 38.0 34.0 38.0 86-87 36.4928903389128 38.0 38.0 38.0 34.0 38.0 88-89 36.435879409592985 38.0 38.0 38.0 34.0 38.0 90-91 36.43062942145622 38.0 38.0 38.0 34.0 38.0 92-93 36.4776116081846 38.0 38.0 38.0 34.0 38.0 94-95 36.37361441771444 38.0 38.0 38.0 34.0 38.0 96-97 36.3310268967207 38.0 37.0 38.0 34.0 38.0 98-99 36.40179540291495 38.0 37.0 38.0 34.0 38.0 100 34.757538925408966 38.0 34.0 38.0 27.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 2.0 18 21.0 19 57.0 20 231.0 21 628.0 22 2050.0 23 5775.0 24 13465.0 25 26704.0 26 46495.0 27 73169.0 28 109155.0 29 152689.0 30 205292.0 31 270235.0 32 353099.0 33 477515.0 34 694301.0 35 1188170.0 36 3109864.0 37 1.0187087E7 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.14776090145167 19.070449498593167 14.602248852625005 22.17954074733016 2 13.878372220767979 21.190211352515643 43.115176610268 21.816239816448377 3 16.647406798910666 27.81912915130547 31.278994731852748 24.254469317931115 4 11.712452893721235 19.68006746747045 40.26897250674568 28.33850713206263 5 13.075948418971153 37.701390296613205 36.4768460165082 12.745815267907451 6 27.888727614909975 39.36649810241817 20.135962378346704 12.608811904325155 7 24.8581461673809 33.40948607011443 25.03334711909503 16.699020643409636 8 23.228370009843932 37.3057608640906 22.50296228352748 16.96290684253799 9 25.10977769927224 17.23813732841397 22.49295992126746 35.15912505104634 10-11 23.14450564093033 27.397504753486697 30.135914486660088 19.322075118922886 12-13 24.09004809882996 25.056889913244284 30.099652967686698 20.753409020239058 14-15 21.471625331845512 26.39269002301016 27.60551487218849 24.530169772955833 16-17 21.009790491891582 29.339718765732144 28.325593325705057 21.324897416671217 18-19 21.00569673547015 28.70922707277676 29.775380166616184 20.509696025136908 20-21 21.868407522010827 27.82731670304533 29.551220462380705 20.753055312563134 22-23 21.622268486830055 27.805487802787283 29.32712584106018 21.245117869322478 24-25 21.403593180996054 27.87740081411051 29.459087209018577 21.25991879587486 26-27 21.37923392855675 28.078008803859845 29.315890104358182 21.226867163225222 28-29 21.283788239069175 28.064567654894358 29.392016460073044 21.259627645963423 30-31 21.590634072733955 27.93947298613687 29.302581258400927 21.167311682728243 32-33 21.476324135230445 27.946459991301197 29.31289208685333 21.264323786615023 34-35 21.46498963299365 27.9717167318242 29.365211671489554 21.198081963692598 36-37 21.490630416858995 28.0162533415235 29.219921175597968 21.27319506601954 38-39 21.323884875218248 28.085268799594786 29.37253993013141 21.218306395055563 40-41 21.600539923425995 27.96458032843445 29.203406297469414 21.231473450670144 42-43 21.48817410344284 27.98954570418989 29.131648558260526 21.390631634106743 44-45 21.555661505938517 28.092490452222663 28.997471438891715 21.354376602947102 46-47 21.57740156762599 28.050013763724223 28.78817882373093 21.58440584491885 48-49 21.540930819993402 28.151189995551366 28.80126018284989 21.50661900160534 50-51 21.509851318385696 28.248407987345338 28.736001151297113 21.505739542971856 52-53 21.636786308526336 28.208298854886653 28.656671257744044 21.498243578842967 54-55 21.632962546037533 28.1115029242984 28.67816365314554 21.577370876518533 56-57 21.631364862932287 28.154745577408345 28.642620521825567 21.571269037833797 58-59 21.52152617052069 28.262497415618533 28.669507664967696 21.54646874889308 60-61 21.752217656487225 28.218679596171768 28.681366573118368 21.34773617422264 62-63 21.503831067770353 28.297289944272087 28.675623092017215 21.523255895940345 64-65 21.54303699882851 28.26396948778292 28.595171733520967 21.59782177986761 66-67 21.55872873085902 28.28561282202934 28.64794120478421 21.50771724232743 68-69 21.50404484565423 28.380207834492392 28.607818815001814 21.507928504851556 70-71 21.597522705453677 28.158186709871387 28.468447019081882 21.77584356559305 72-73 21.59887134087742 28.128174650478567 28.455585617850936 21.817368390793078 74-75 21.549155776726025 28.20721638402242 28.555793669372363 21.68783416987919 76-77 21.69112884840463 28.041004229995494 28.41679190189647 21.851075019703405 78-79 21.590602274544253 28.024373393890695 28.314135920784278 22.070888410780775 80-81 21.7568639909225 28.237238083997475 28.31001997607497 21.69587794900506 82-83 21.810475741219463 28.084548306738032 28.322983786414817 21.78199216562769 84-85 21.77700232780208 28.07880228591091 28.22806637945836 21.916129006828648 86-87 21.658643149671654 28.203507050622274 28.31952302058885 21.81832677911722 88-89 21.886754194651495 28.214308208098558 28.234447894600972 21.664489702648975 90-91 21.892397923399088 28.284398063369455 28.203070454388733 21.62013355884272 92-93 21.773666252188477 28.090173471194074 28.23989138985496 21.896268886762492 94-95 21.858083086784877 28.284535351346157 28.231396430709815 21.625985131159148 96-97 22.02084336701222 28.207304818130524 28.391229840912292 21.380621973944965 98-99 22.815048054133673 30.236142880321186 28.71984487788428 18.228964187660857 100 21.688241479643438 31.110619438153993 22.705424468764136 24.495714613438434 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1432.0 1 1600.0 2 3034.0 3 4805.5 4 6546.0 5 9744.5 6 12319.0 7 14125.5 8 16079.5 9 17218.5 10 17182.0 11 17080.0 12 18741.0 13 22759.5 14 30272.5 15 39361.5 16 47161.0 17 52955.5 18 55137.0 19 53395.0 20 50804.5 21 50306.5 22 54494.0 23 66242.5 24 86107.5 25 113115.0 26 148151.0 27 189627.5 28 233991.5 29 281829.0 30 329898.0 31 375520.0 32 419775.0 33 462038.5 34 504986.0 35 544163.5 36 579585.0 37 611086.5 38 631611.0 39 646490.0 40 664112.0 41 678506.5 42 687069.5 43 693913.5 44 696098.5 45 697290.5 46 698585.0 47 689614.0 48 670306.0 49 646188.5 50 616618.5 51 582831.0 52 545653.5 53 505499.5 54 464407.5 55 423926.0 56 383734.5 57 340959.5 58 297553.0 59 254286.0 60 207724.0 61 163151.0 62 125406.5 63 94404.0 64 69003.0 65 49596.0 66 35632.0 67 26092.5 68 19241.5 69 13559.5 70 9535.0 71 6819.0 72 4716.5 73 3150.5 74 2106.0 75 1402.0 76 864.5 77 483.5 78 280.5 79 161.5 80 96.5 81 61.5 82 43.5 83 36.5 84 33.5 85 29.0 86 25.5 87 17.5 88 10.0 89 8.0 90 6.5 91 4.5 92 2.0 93 1.0 94 1.0 95 1.0 96 1.0 97 1.0 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.002394182455856596 6 5.911561619399002E-6 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 5.912160838916704E-6 26-27 0.0 28-29 2.6611832099564446E-5 30-31 0.0 32-33 2.9613941698855294E-5 34-35 0.0 36-37 4.934526854676103E-4 38-39 4.1762441866680924E-5 40-41 1.766997217937753E-4 42-43 6.616714681458273E-5 44-45 6.499260036572999E-4 46-47 0.0 48-49 7.956002571380032E-5 50-51 6.155352037047587E-6 52-53 9.89810886731981E-5 54-55 0.001955400759385636 56-57 0.0012128425143063057 58-59 1.3816844164964577E-4 60-61 3.439805409261263E-4 62-63 1.0798617472061435E-4 64-65 6.553542925226632E-4 66-67 0.0013232418807922618 68-69 3.309372825182381E-4 70-71 6.017577409020198E-4 72-73 1.4834793313253178E-4 74-75 1.328367144206906E-4 76-77 1.0038671640136912E-5 78-79 0.0015651836236996325 80-81 0.0 82-83 0.0010323260380578484 84-85 1.8324760745181583E-4 86-87 3.4861614207781145E-6 88-89 4.92326649588793E-5 90-91 0.0 92-93 0.0 94-95 1.0852797645029734E-5 96-97 2.9377974634689475E-4 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 106.0 20-21 441.0 22-23 909.0 24-25 1268.0 26-27 2466.0 28-29 5230.0 30-31 16584.0 32-33 22775.0 34-35 33544.0 36-37 55383.0 38-39 65573.0 40-41 68479.0 42-43 79607.0 44-45 97882.0 46-47 101656.0 48-49 95860.0 50-51 84089.0 52-53 79462.0 54-55 86783.0 56-57 93137.0 58-59 55009.0 60-61 102137.0 62-63 101005.0 64-65 108132.0 66-67 117429.0 68-69 120324.0 70-71 125692.0 72-73 111342.0 74-75 112355.0 76-77 118213.0 78-79 122354.0 80-81 122535.0 82-83 117583.0 84-85 118072.0 86-87 122533.0 88-89 128627.0 90-91 129970.0 92-93 133000.0 94-95 163719.0 96-97 583665.0 98-99 1215181.0 100-101 1.1895893E7 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 81.95034512271474 #Duplication Level Percentage of deduplicated Percentage of total 1 88.41365413863116 72.4552947022116 2 7.619927082309235 12.48911308410325 3 2.0357961688977193 5.005025959220057 4 0.84112387689558 2.757215680101944 5 0.3934044216761189 1.6119814064579974 6 0.22105122088758722 1.0869134304921133 7 0.13503342694169523 0.7746225158682367 8 0.08242146825626867 0.5403574215297676 9 0.0595912345017523 0.4395170010336504 >10 0.19325493061158625 2.4563432676341717 >50 0.003622482398168144 0.19625347697784182 >100 0.0010502651491471793 0.13559256832323968 >500 4.158632687162563E-5 0.022875707506840457 >1k 2.7696517176044232E-5 0.02889377853926632 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.9115616193990026E-6 0.0 0.0 0.0 0.0 2 5.9115616193990026E-6 2.364624647759601E-5 0.0 0.0 0.0 3 5.9115616193990026E-6 2.364624647759601E-5 0.0 0.0 0.0 4 5.9115616193990026E-6 7.685030105218703E-5 0.0 1.1823123238798005E-5 0.0 5 1.1823123238798005E-5 8.276186267158604E-5 0.0 2.364624647759601E-5 0.0 6 9.458498591038404E-5 8.276186267158604E-5 0.0 2.9557808096995012E-5 0.0 7 9.458498591038404E-5 8.276186267158604E-5 0.0 2.9557808096995012E-5 0.0 8 1.0049654752978304E-4 1.0640810914918204E-4 0.0 3.546936971639401E-5 0.0 9 1.0049654752978304E-4 1.5370060210437406E-4 0.0 4.138093133579302E-5 0.0 10-11 1.1231967076858104E-4 1.5370060210437406E-4 0.0 7.389452024248754E-5 0.0 12-13 1.3005435562677805E-4 1.5961216372377307E-4 0.0 9.162920510068454E-5 0.0 14-15 1.4483325967527556E-4 2.0986043748866457E-4 0.0 1.1231967076858104E-4 2.6602027287295508E-5 16-17 1.7439106777227057E-4 2.128162182983641E-4 0.0 1.4483325967527556E-4 4.138093133579302E-5 18-19 1.7734684858197007E-4 2.275951223468616E-4 0.0 1.7143528696257106E-4 5.320405457459102E-5 20-21 1.7734684858197007E-4 2.423740263953591E-4 0.0 1.7734684858197007E-4 5.320405457459102E-5 22-23 1.8325841020136907E-4 2.807991769214526E-4 0.0 1.9803731424986658E-4 6.502717781338903E-5 24-25 2.0690465667896508E-4 3.251358890669451E-4 0.0 2.128162182983641E-4 7.980608186188653E-5 26-27 2.1577199910806358E-4 3.4878213554454115E-4 0.0 2.601087112535561E-4 9.162920510068454E-5 28-29 2.216835607274626E-4 3.5469369716394013E-4 0.0 3.9311884769003365E-4 9.754076672008355E-5 30-31 2.394182455856596E-4 3.872072860706346E-4 0.0 8.098839418576632E-4 1.0049654752978304E-4 32-33 2.482855880147581E-4 3.9607462849973316E-4 0.0 0.0019271690879240748 1.0640810914918204E-4 34-35 2.541971496341571E-4 4.699691487422207E-4 0.0 0.0035853621221654947 1.1231967076858104E-4 36-37 2.601087112535561E-4 5.438636689847082E-4 0.0 0.0066327721369656804 1.1527545157828054E-4 38-39 2.601087112535561E-4 5.911561619399003E-4 0.0 0.01860664019705836 1.2414279400737904E-4 40-41 2.660202728729551E-4 6.975642710890823E-4 0.0 0.03224461285301186 1.2414279400737904E-4 42-43 2.896665193505511E-4 7.300778599957768E-4 0.0 0.039305973207383965 1.2709857481707856E-4 44-45 2.985338617796496E-4 8.217070650964613E-4 0.0 0.048504363087168816 1.3005435562677805E-4 46-47 3.074012042087481E-4 9.044689277680474E-4 0.0 0.05825843975917717 1.4187747886557604E-4 48-49 3.074012042087481E-4 9.192478318165449E-4 0.0 0.06779970021288716 1.5370060210437406E-4 50-51 3.133127658281471E-4 0.0010049654752978304 0.0 0.07798827666392133 1.5370060210437406E-4 52-53 3.2809166987664463E-4 0.0010167885985366285 0.0 0.11266549712331589 1.6847950615287157E-4 54-55 3.4878213554454115E-4 0.001019744379346328 0.0 0.1558908356843614 1.862141910110686E-4 56-57 3.6356103959303863E-4 0.0010345232833948255 0.0 0.20696672807596878 1.9508153344016706E-4 58-59 3.7833994364153616E-4 0.0010433906258239239 0.0 0.3740451941250428 1.9508153344016706E-4 60-61 4.0198619011913214E-4 0.00106703687230152 0.0 0.5148319898718396 2.0099309505956607E-4 62-63 4.0198619011913214E-4 0.0010759042147306184 0.0 0.5210598200378765 2.128162182983641E-4 64-65 4.0198619011913214E-4 0.0011823123238798004 0.0 0.5260757800719367 2.128162182983641E-4 66-67 4.078977517385312E-4 0.001197091227928298 0.0 0.530615859395635 2.1577199910806358E-4 68-69 4.1380931335793016E-4 0.0012207374744058939 0.0 0.5355431460054041 2.1872777991776307E-4 70-71 4.1380931335793016E-4 0.0012532510633125884 0.0 0.5397728683440841 2.305509031565611E-4 72-73 4.1972087497732914E-4 0.0012768973097901843 0.0 0.5431897509600967 2.482855880147581E-4 74-75 4.3154399821612716E-4 0.0013123666795065783 0.0 0.5456371374705279 2.541971496341571E-4 76-77 4.3745555983552614E-4 0.00136261495327147 0.0 0.5482057109941567 2.541971496341571E-4 78-79 4.433671214549252E-4 0.0013833054189393665 0.0 0.5500767202466965 2.541971496341571E-4 80-81 4.433671214549252E-4 0.0013833054189393665 0.0 0.5506796995318752 2.571529304438566E-4 82-83 4.4632290226462464E-4 0.001386261199749066 0.0 0.5511880938311435 2.601087112535561E-4 84-85 4.551902446937232E-4 0.0013892169805587655 0.0 0.5514304678575389 2.601087112535561E-4 86-87 4.551902446937232E-4 0.0014128632270363616 0.0 0.5515457433091173 2.630644920632556E-4 88 4.551902446937232E-4 0.0014660672816109526 0.0 0.5515605222131658 2.660202728729551E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 17455 0.0 48.48343 1 GTATCAA 32610 0.0 37.59605 1 TCAACGC 36565 0.0 32.318344 4 ATCAACG 36970 0.0 31.952438 3 CAACGCA 37375 0.0 31.571003 5 AACGCAG 38990 0.0 30.397629 6 TATCAAC 40080 0.0 29.866945 2 ACGCAGA 44090 0.0 26.861568 7 CGCAGAG 44315 0.0 26.725185 8 GTACATG 41640 0.0 21.703167 1 GCAGAGT 54580 0.0 21.634644 9 TACATGG 41940 0.0 20.868343 2 ACATGGG 41600 0.0 20.174578 3 GAGTACT 31930 0.0 20.049374 12-13 AGAGTAC 48640 0.0 19.449306 10-11 CGAGACC 14455 0.0 18.782377 86-87 CAGAGTA 53930 0.0 18.59442 10-11 AGACCGA 14810 0.0 18.568863 88-89 CATGGGG 30535 0.0 18.208628 4 ACCGAGG 15600 0.0 17.755703 90-91 >>END_MODULE