##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138936_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7350101 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.428882813991265 34.0 31.0 34.0 31.0 34.0 2 32.55735070851407 34.0 31.0 34.0 31.0 34.0 3 32.60889571449427 34.0 31.0 34.0 31.0 34.0 4 36.138838500314485 37.0 35.0 37.0 35.0 37.0 5 36.04900300009483 37.0 35.0 37.0 35.0 37.0 6 36.06734900649665 37.0 35.0 37.0 35.0 37.0 7 36.02286621639621 37.0 35.0 37.0 35.0 37.0 8 36.01580304814859 37.0 35.0 37.0 35.0 37.0 9 37.74087689407261 39.0 38.0 39.0 35.0 39.0 10-11 37.67108717281572 39.0 37.0 39.0 35.0 39.0 12-13 37.6537061191404 39.0 37.0 39.0 35.0 39.0 14-15 39.07499237085314 41.0 38.0 41.0 36.0 41.0 16-17 39.04651663970332 41.0 38.0 41.0 35.0 41.0 18-19 39.049584964886876 41.0 38.5 41.0 35.0 41.0 20-21 39.03790895673316 41.0 39.0 41.0 35.0 41.0 22-23 39.025581498201106 41.0 39.0 41.0 35.0 41.0 24-25 38.98507352222873 41.0 39.0 41.0 35.0 41.0 26-27 38.920498315310105 41.0 38.0 41.0 35.0 41.0 28-29 38.85709765919924 40.0 38.0 41.0 35.0 41.0 30-31 38.779640938988834 40.0 38.0 41.0 34.5 41.0 32-33 38.68839449048997 40.0 38.0 41.0 34.0 41.0 34-35 38.61249697445474 40.0 38.0 41.0 34.0 41.0 36-37 38.586984718243684 40.0 38.0 41.0 34.0 41.0 38-39 38.527454961636444 40.0 38.0 41.0 34.0 41.0 40-41 38.52466672629795 40.0 38.0 41.0 34.0 41.0 42-43 38.4852005304911 40.0 38.0 41.0 34.0 41.0 44-45 38.40460020737571 40.0 38.0 41.0 33.5 41.0 46-47 38.36005452187837 40.0 38.0 41.0 33.0 41.0 48-49 38.30845096027501 40.0 38.0 41.0 33.0 41.0 50-51 38.238725589510715 40.0 38.0 41.0 33.0 41.0 52-53 38.12475804593944 40.0 37.0 41.0 33.0 41.0 54-55 38.00041189610087 40.0 37.0 41.0 33.0 41.0 56-57 37.88626863861072 40.0 37.0 41.0 33.0 41.0 58-59 37.77706236442082 40.0 36.0 41.0 33.0 41.0 60-61 37.638358495282475 39.5 36.0 41.0 32.0 41.0 62-63 37.43727068267929 39.0 35.5 41.0 32.0 41.0 64-65 37.23782984009824 39.0 35.0 41.0 32.0 41.0 66-67 37.0135573448548 39.0 35.0 41.0 32.0 41.0 68-69 36.693896639293214 38.0 35.0 40.0 31.0 41.0 70-71 36.378188643857825 37.0 35.0 40.0 31.0 41.0 72-73 36.07697114436127 37.0 35.0 39.0 31.0 41.0 74-75 35.81657295043057 36.0 35.0 39.0 31.0 41.0 76-77 35.527038025893305 36.0 35.0 39.0 31.0 40.5 78-79 35.24890698644096 35.5 34.0 37.5 31.0 39.5 80-81 34.968883182517956 35.0 34.0 37.0 31.0 39.0 82-83 34.669360876125594 35.0 34.0 37.0 31.0 39.0 84-85 34.43305047921003 35.0 34.0 36.0 31.0 37.5 86-87 34.26362721723689 35.0 34.0 36.0 31.0 37.0 88-89 34.11733640962145 35.0 34.0 36.0 31.0 37.0 90-91 33.97675431210543 35.0 34.0 35.0 31.0 36.0 92-93 33.91611270046298 35.0 34.0 35.0 31.0 36.0 94-95 33.86121809860836 35.0 34.0 35.0 31.0 36.0 96-97 33.8521829437368 35.0 34.0 35.0 31.0 36.0 98-99 33.98537719807999 35.0 34.0 35.0 31.0 36.0 100 31.207991426249134 33.0 29.0 35.0 25.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 12.0 19 38.0 20 74.0 21 267.0 22 963.0 23 3077.0 24 8245.0 25 17151.0 26 31044.0 27 49675.0 28 72244.0 29 98441.0 30 127376.0 31 160192.0 32 200373.0 33 251709.0 34 329138.0 35 452745.0 36 662289.0 37 1227788.0 38 2019838.0 39 1500692.0 40 136729.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.27067111050583 20.708477339290983 14.740668189457532 24.280183360745657 2 14.57406159421325 21.016803728193256 41.783145493664364 22.625989183929125 3 18.324433666644534 25.994164967820794 30.48046499579325 25.200936369741424 4 12.62744552761928 18.419583622048187 38.174128491567664 30.77884235876487 5 12.961408790983311 37.86195161124849 35.744402871855826 13.432236725912366 6 29.751771037564108 38.12317302114795 18.574412560348215 13.550643380939725 7 26.17904162133282 32.71610825483895 22.897345220154115 18.207504903674113 8 23.915821020690736 37.667332734611406 20.96289561191064 17.453950632787222 9 24.95621488738726 17.286551572556622 21.3182376677545 36.43899587230162 10-11 24.06495942807818 27.083947412656066 28.688395953494755 20.162697205771 12-13 24.75166997773363 24.399082842160745 29.009585994635717 21.839661185469907 14-15 21.858692826125793 25.940187760685195 26.5913556834117 25.609763729777317 16-17 21.540437550309825 29.210326335881625 27.28212976715017 21.96710634665838 18-19 21.53880858045419 28.118964948512797 29.064532453300707 21.27769401773231 20-21 22.271585755410023 27.181284051285314 29.119922772016558 21.427207421288106 22-23 21.9121713351544 27.330655322850316 28.963235178549645 21.793938163445638 24-25 21.816217678900525 27.453698955433165 29.045264290729637 21.68481907493668 26-27 21.79761416960092 27.609427953306348 29.023438473445477 21.569519403647256 28-29 21.47828515667507 27.428727797843578 29.20432794401536 21.88865910146599 30-31 21.919759607772484 27.241658886541202 29.283491392724354 21.55509011296196 32-33 21.62049488466323 27.585660288252097 29.03107530727098 21.762769519813695 34-35 21.646734005512837 27.65100684049255 29.242796545902962 21.459462608091652 36-37 21.92364285605303 27.47807652974116 28.902673192498153 21.69560742170766 38-39 21.701055658851555 27.404839815485687 29.074800056183136 21.819304469479626 40-41 21.841015977113702 27.34619686585331 29.00458862599037 21.80819853104262 42-43 21.928588987564602 27.375532975991 28.912990344975686 21.782887691468712 44-45 21.848355977599116 27.605466856095656 28.65146228780784 21.894714878497393 46-47 22.109278304586404 27.46434589083387 28.187127690273776 22.23924811430596 48-49 22.00957345623538 27.541797360823107 28.24342974103616 22.205199441905354 50-51 21.844210084715325 27.734890442575676 28.28487114713613 22.13602832557287 52-53 21.940622087110476 27.821754382632864 28.291155261815444 21.946468268441215 54-55 21.94602269538404 27.816564927413594 28.10108412282465 22.136328254377716 56-57 22.117341715449093 28.00117943365584 27.833169048960016 22.048309801935055 58-59 21.82138044440465 28.219448943969056 28.199733996935144 21.759436614691154 60-61 22.094768039226988 28.295427186318644 27.841381132338377 21.76842364211599 62-63 21.868890717354432 28.506744780375254 27.770412019713177 21.85395248255714 64-65 21.898633687019878 28.367382011499124 27.824485771379486 21.909498530101512 66-67 22.004031667371308 28.263759211484015 27.73122969988075 22.000979421263935 68-69 21.926716523988564 28.122731744630453 27.905051604242082 22.045500127138908 70-71 21.968636832237216 27.812358384542406 28.00968931485969 22.209315468360693 72-73 22.056982028919332 27.735668837477984 27.977526814670895 22.229822318931785 74-75 21.87578989184232 27.907457974017312 27.969237688149956 22.24751444599041 76-77 22.044712706557277 27.848800313787503 27.858092503073422 22.248394476581794 78-79 21.974711951079883 27.890686541840875 27.888440711563778 22.246160795515458 80-81 21.97326621699681 27.854838988820283 27.958234611419066 22.213660182763846 82-83 21.97166415792911 27.857780090796176 28.060789033982864 22.109766717291855 84-85 22.142295136971704 27.850314854634856 27.943250339336227 22.064139669057212 86-87 21.96897635865658 27.91309669089186 27.978487716119727 22.139439234331828 88-89 22.006985309204133 27.87797265834362 27.969737494509967 22.14530453794228 90-91 22.01247363279238 27.932171002284743 27.940222196625413 22.115133168297465 92-93 22.025649281307217 27.89174155934991 28.02261876050098 22.059990398841897 94-95 21.897529738437065 28.037000564613056 27.982688563660634 22.082781133289238 96-97 22.000504038664754 28.116574566996476 28.072860633500333 21.810060760838432 98-99 22.968870288966794 29.989823829935634 28.32739680036228 18.713909080735284 100 22.058840429940435 31.070134715240737 21.747217215284117 25.123807639534707 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1515.0 1 1243.0 2 1504.0 3 2081.5 4 2690.0 5 4620.0 6 6362.5 7 7767.5 8 8853.5 9 8675.5 10 7358.5 11 5846.0 12 5967.0 13 8130.0 14 14459.0 15 23787.0 16 31689.5 17 36483.0 18 37790.0 19 36558.5 20 34065.5 21 31304.5 22 30607.5 23 33488.5 24 40356.5 25 51121.0 26 65321.0 27 81255.5 28 97348.0 29 115339.5 30 131670.0 31 147189.0 32 164993.0 33 181834.0 34 198735.5 35 214675.0 36 230159.5 37 246081.5 38 257626.5 39 265211.5 40 274112.5 41 283071.0 42 289599.5 43 296843.0 44 308947.0 45 324267.5 46 329233.5 47 326858.0 48 321380.5 49 311558.5 50 303523.5 51 293552.0 52 280519.5 53 265163.0 54 247325.0 55 226656.5 56 205252.5 57 184447.5 58 164448.5 59 143411.5 60 120532.0 61 98034.0 62 77183.5 63 60387.0 64 46771.0 65 35880.0 66 27545.0 67 21549.5 68 17018.5 69 12916.0 70 9895.0 71 7577.5 72 5777.0 73 4372.0 74 3251.5 75 2472.0 76 1849.5 77 1362.0 78 1055.0 79 800.5 80 578.0 81 407.5 82 281.0 83 183.5 84 120.0 85 85.0 86 62.5 87 52.0 88 32.5 89 17.0 90 12.0 91 8.5 92 8.5 93 7.5 94 6.0 95 5.5 96 5.0 97 4.5 98 2.5 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.006557733016185764 3 1.7686831786393139E-4 4 0.0 5 0.009618915440753807 6 0.01194541408342552 7 0.0 8 0.0 9 0.0 10-11 7.482890371166328E-5 12-13 4.081576566090724E-5 14-15 0.0 16-17 2.789077320161995E-4 18-19 9.591704930313203E-4 20-21 0.0 22-23 6.803999036825896E-5 24-25 6.805748952254949E-6 26-27 6.8087985200940245E-6 28-29 0.0 30-31 0.0 32-33 0.0 34-35 1.0990496517661178E-4 36-37 0.0 38-39 0.0 40-41 0.0 42-43 2.11918838193115E-5 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0060232563886231496 52-53 1.0386605789286334E-4 54-55 2.9932838194301535E-5 56-57 0.0 58-59 7.6266713850340304E-6 60-61 9.248150061715988E-5 62-63 8.329222563599258E-4 64-65 0.0012264071882555473 66-67 0.0010253534130915216 68-69 0.00944003694962333 70-71 9.113757844036424E-4 72-73 6.168129897854947E-4 74-75 4.5670279019663384E-4 76-77 1.3418305873469233E-4 78-79 0.0 80-81 1.2851610422450429E-4 82-83 0.0 84-85 8.755933348784638E-6 86-87 1.9477386311824102E-4 88-89 0.0 90-91 0.0 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 249.0 20-21 891.0 22-23 1633.0 24-25 2916.0 26-27 4715.0 28-29 8528.0 30-31 20233.0 32-33 24458.0 34-35 33091.0 36-37 48461.0 38-39 56313.0 40-41 55705.0 42-43 63281.0 44-45 74756.0 46-47 74505.0 48-49 66439.0 50-51 60201.0 52-53 57206.0 54-55 60663.0 56-57 63613.0 58-59 67126.0 60-61 66400.0 62-63 62327.0 64-65 68043.0 66-67 71774.0 68-69 74521.0 70-71 67725.0 72-73 58510.0 74-75 58763.0 76-77 61393.0 78-79 63649.0 80-81 64259.0 82-83 61934.0 84-85 62099.0 86-87 65867.0 88-89 70768.0 90-91 74244.0 92-93 79247.0 94-95 100209.0 96-97 255817.0 98-99 579838.0 100-101 4437731.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 84.24381295479635 #Duplication Level Percentage of deduplicated Percentage of total 1 88.94108343597952 74.92735996977596 2 7.620361952993719 12.83936694031699 3 1.9530790606647956 4.936044812177231 4 0.7000472682689489 2.358986045102619 5 0.32638858239227414 1.3748109342817942 6 0.16017560445376472 0.809628219691464 7 0.09534123842046129 0.562233661946039 8 0.05653828040639233 0.3810400255473555 9 0.03596010871755604 0.272647500537234 >10 0.10923978769793645 1.3564474222272447 >50 0.0014383789014943216 0.07883456325155568 >100 2.685959298520559E-4 0.048855769685407044 >500 5.180345591496475E-5 0.02954509629853411 >1k 2.5901717418050166E-5 0.02419903916047998 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 2.721051044060483E-5 0.0 4 0.0 0.0 0.0 4.081576566090724E-5 0.0 5 0.0 0.0 0.0 4.081576566090724E-5 0.0 6 0.0 1.3605255220302414E-5 0.0 4.081576566090724E-5 0.0 7 0.0 1.3605255220302414E-5 0.0 4.081576566090724E-5 0.0 8 0.0 2.721051044060483E-5 0.0 5.442102088120966E-5 0.0 9 0.0 1.4965780742332656E-4 0.0 1.6326306264362897E-4 0.0 10-11 0.0 1.4965780742332656E-4 0.0 1.7686831786393139E-4 0.0 12-13 0.0 1.4965780742332656E-4 0.0 1.7686831786393139E-4 0.0 14-15 0.0 2.108814559146874E-4 0.0 1.904735730842338E-4 0.0 16-17 0.0 2.1768408352483863E-4 0.0 2.3128933874514107E-4 0.0 18-19 0.0 2.516972215755947E-4 0.0 2.789077320161995E-4 0.0 20-21 0.0 2.857103596263507E-4 0.0 2.9931561484665317E-4 0.0 22-23 0.0 3.3332875289740916E-4 0.0 3.3332875289740916E-4 0.0 24-25 0.0 3.809471461684676E-4 0.0 3.673418909481652E-4 0.0 26-27 0.0 3.9455240138877004E-4 0.0 4.1496028421922365E-4 0.0 28-29 0.0 3.9455240138877004E-4 0.0 7.074732714557256E-4 0.0 30-31 0.0 4.489734222699797E-4 0.0 0.0016870516473174995 0.0 32-33 0.0 4.625786774902821E-4 0.0 0.003857089854955735 0.0 34-35 0.0 5.306049535917941E-4 0.0 0.0067618118444903 0.0 36-37 0.0 5.986312296933062E-4 0.0 0.010659717465106942 0.0 38-39 0.0 5.986312296933062E-4 0.0 0.01638752991285426 0.0 40-41 0.0 6.394469953542136E-4 0.0 0.022176566009092936 0.0 42-43 0.0 6.734601334049695E-4 0.0 0.02772751013897632 0.0 44-45 1.3605255220302414E-5 7.686969199470864E-4 0.0 0.033931506519434225 0.0 46-47 1.3605255220302414E-5 8.163153132181449E-4 0.0 0.040353186983416965 0.0 48-49 1.3605255220302414E-5 8.163153132181449E-4 0.0 0.04593134162374095 0.0 50-51 1.3605255220302414E-5 9.659731206414714E-4 0.0 0.051938061803504465 0.0 52-53 1.3605255220302414E-5 9.795783758617738E-4 0.0 0.05754342695426906 0.0 54-55 1.3605255220302414E-5 9.863810034719252E-4 0.0 0.06348892348554122 0.0 56-57 1.3605255220302414E-5 0.0010067888863023787 0.0 0.06976774876971079 0.0 58-59 1.3605255220302414E-5 0.00101359151391253 0.0 0.07618262660608337 0.0 60-61 1.3605255220302414E-5 0.0010203941415226811 0.0 0.08238662298654129 0.0 62-63 1.3605255220302414E-5 0.001047604651963286 0.0 0.08835933002825402 0.0 64-65 1.3605255220302414E-5 0.0011972624593866125 0.0 0.09402591882750999 0.0 66-67 1.3605255220302414E-5 0.0012040650869967638 0.0 0.09974692864764716 0.0 68-69 1.3605255220302414E-5 0.0012448808526576709 0.0 0.10563120153042796 0.0 70-71 1.3605255220302414E-5 0.0012584861078779735 0.0 0.11081480376936317 0.0 72-73 1.3605255220302414E-5 0.0012652887354881247 0.0 0.1146991041347595 0.0 74-75 1.3605255220302414E-5 0.0012924992459287295 0.0 0.11769906291083619 0.0 76-77 1.3605255220302414E-5 0.0013401176391997878 0.0 0.12065820592125197 0.0 78-79 1.3605255220302414E-5 0.0013605255220302415 0.0 0.12255613902448415 0.0 80-81 1.3605255220302414E-5 0.0013605255220302415 0.0 0.1230799413504658 0.0 82-83 1.3605255220302414E-5 0.0013605255220302415 0.0 0.123943875056955 0.0 84-85 1.3605255220302414E-5 0.001374130777250544 0.0 0.12426359855463211 0.0 86-87 1.3605255220302414E-5 0.001374130777250544 0.0 0.12446767738293664 0.0 88 1.3605255220302414E-5 0.0014285517981317535 0.0 0.1245697167970889 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 9465 0.0 48.04407 1 CTTATAC 6390 0.0 37.84475 1 GTATCAA 17060 0.0 35.278175 1 TCAACGC 20225 0.0 29.029457 4 ATCAACG 20430 0.0 28.738365 3 CAACGCA 20705 0.0 28.255272 5 TATACAC 9835 0.0 28.250847 3 TATCAAC 21470 0.0 27.64152 2 AACGCAG 21440 0.0 27.303392 6 TTATACA 10420 0.0 25.098488 2 ACGCAGA 24850 0.0 23.537786 7 TGGTATC 4585 0.0 23.218012 2 CGCAGAG 25345 0.0 23.078081 8 GTGGTAT 5015 0.0 22.480816 1 ACATCTC 11175 0.0 21.971346 8 ACACATC 11290 0.0 21.74947 6 TACACAT 12875 0.0 20.864122 5 GCAGAGT 29660 0.0 19.77714 9 TACATGG 21740 0.0 19.760366 2 GTACATG 22415 0.0 19.632755 1 >>END_MODULE