##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138933_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7379326 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.73813394339808 33.0 33.0 33.0 33.0 33.0 2 32.731810466159104 33.0 33.0 33.0 33.0 33.0 3 32.73091079049767 33.0 33.0 33.0 33.0 33.0 4 36.66316015852939 37.0 37.0 37.0 37.0 37.0 5 36.68162458197402 37.0 37.0 37.0 37.0 37.0 6 36.6005503754679 37.0 37.0 37.0 37.0 37.0 7 36.65073924095507 37.0 37.0 37.0 37.0 37.0 8 36.65658936873096 37.0 37.0 37.0 37.0 37.0 9 36.66519706542305 37.0 37.0 37.0 37.0 37.0 10-11 36.62792055805639 37.0 37.0 37.0 37.0 37.0 12-13 36.60233610766078 37.0 37.0 37.0 37.0 37.0 14-15 38.74481151801669 40.0 37.0 40.0 37.0 40.0 16-17 38.69355344919035 40.0 37.0 40.0 37.0 40.0 18-19 38.72103001005783 40.0 37.0 40.0 37.0 40.0 20-21 38.745323068813136 40.0 37.0 40.0 37.0 40.0 22-23 38.57729326721569 40.0 37.0 40.0 37.0 40.0 24-25 38.74399077474068 40.0 37.0 40.0 37.0 40.0 26-27 38.559327027338114 40.0 37.0 40.0 37.0 40.0 28-29 38.5417198743201 40.0 37.0 40.0 37.0 40.0 30-31 38.52291505754974 40.0 37.0 40.0 37.0 40.0 32-33 38.51242949657002 40.0 37.0 40.0 37.0 40.0 34-35 38.42269894210909 40.0 37.0 40.0 37.0 40.0 36-37 33.431441784917304 40.0 37.0 40.0 8.5 40.0 38-39 37.361287133179644 40.0 37.0 40.0 33.0 40.0 40-41 37.941120873387845 40.0 37.0 40.0 35.0 40.0 42-43 38.14975036027717 40.0 37.0 40.0 37.0 40.0 44-45 38.15235500217215 40.0 37.0 40.0 37.0 40.0 46-47 38.05047185524995 40.0 37.0 40.0 33.0 40.0 48-49 38.03246442322087 40.0 37.0 40.0 33.0 40.0 50-51 37.97997210901062 40.0 37.0 40.0 33.0 40.0 52-53 37.905317852268496 40.0 37.0 40.0 33.0 40.0 54-55 37.82377708807412 40.0 37.0 40.0 33.0 40.0 56-57 37.74419955158386 40.0 37.0 40.0 33.0 40.0 58-59 37.59798359562933 40.0 37.0 40.0 33.0 40.0 60-61 37.404740270305524 38.5 37.0 40.0 33.0 40.0 62-63 37.184228390175356 37.0 37.0 40.0 33.0 40.0 64-65 36.97976490593193 37.0 37.0 40.0 33.0 40.0 66-67 36.71199441510456 37.0 37.0 40.0 33.0 40.0 68-69 36.43808143103482 37.0 37.0 40.0 33.0 40.0 70-71 36.1722273244364 37.0 37.0 38.5 33.0 40.0 72-73 35.90871723741828 37.0 37.0 37.0 33.0 40.0 74-75 35.625809294408555 37.0 35.0 37.0 33.0 40.0 76-77 33.78855574656099 35.0 33.0 37.0 27.0 37.0 78-79 35.24173456282439 37.0 33.0 37.0 33.0 37.0 80-81 35.28046391432545 37.0 33.0 37.0 33.0 37.0 82-83 35.34480931078335 37.0 33.0 37.0 33.0 37.0 84-85 35.20924050935869 37.0 33.0 37.0 33.0 37.0 86-87 35.12908897765428 37.0 33.0 37.0 33.0 37.0 88-89 35.04427362900236 37.0 33.0 37.0 33.0 37.0 90-91 34.90241627113159 37.0 33.0 37.0 33.0 37.0 92-93 34.89240657279279 37.0 33.0 37.0 33.0 37.0 94-95 34.85840424664639 37.0 33.0 37.0 33.0 37.0 96-97 34.83675194172267 37.0 33.0 37.0 33.0 37.0 98-99 34.79891361163435 37.0 33.0 37.0 33.0 37.0 100 34.741382115573074 37.0 33.0 37.0 33.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 4.0 20 33.0 21 173.0 22 784.0 23 2249.0 24 5413.0 25 11107.0 26 19518.0 27 31866.0 28 47184.0 29 66854.0 30 91548.0 31 123085.0 32 164790.0 33 223529.0 34 317470.0 35 498107.0 36 985146.0 37 2353101.0 38 2361661.0 39 75704.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.5923622292876 20.199581913036504 14.07022809400208 24.137827763673812 2 14.47987255204608 20.941018190550196 41.9552137959483 22.623895461455422 3 17.691158933217693 26.730526344319166 30.799422701647877 24.778892020815267 4 12.13438338224011 18.3606220546322 39.41952663227132 30.085467930856375 5 13.083816778209323 37.952674760477606 35.74783815233209 13.215670308980975 6 29.207166074516834 38.430528750186674 19.128454278886718 13.233850896409779 7 25.882417987767447 32.986129085501844 23.5466491113145 17.584803815416205 8 24.29171715682435 36.38095132265467 21.544515041075567 17.78281647944541 9 25.716454321167 16.661033812573127 21.241208207904084 36.38130365835579 10-11 23.92558615786862 26.653308174757424 29.24605851537119 20.17504715200277 12-13 25.09368064237845 24.284765302413795 28.996042456994044 21.625511598213713 14-15 22.202617149587915 25.517540490825315 26.77384763865968 25.505994720927088 16-17 21.76276668085947 28.58086903871709 27.382216207821692 22.27414807260175 18-19 21.679242792634447 27.80850175205703 29.087548103986734 21.424707351321786 20-21 22.597043302914415 27.020617466981427 28.947444024945863 21.4348952051583 22-23 22.427229228708836 27.064152607539683 28.607300075704206 21.901318088047272 24-25 22.066511884054275 27.22280875274935 28.80466554499198 21.906013818204393 26-27 22.052644280958916 27.487636586819814 28.65572984332545 21.803989288895817 28-29 21.95501051307512 27.489894641212683 28.737476084204772 21.817618761507422 30-31 22.397148559286894 27.233309913177894 28.601986513658 21.767555013877207 32-33 22.057744551409012 27.42447096997737 28.613572108902684 21.904212369710933 34-35 22.21636972445492 27.376584403785582 28.625555990124507 21.78148988163499 36-37 22.29531945591194 27.407748822578203 28.376721920659293 21.920209800850564 38-39 21.98622319239058 27.379136926463644 28.670848731682298 21.963791149463482 40-41 22.33759678021676 27.253520744359733 28.560317012883136 21.848565462540375 42-43 22.252927982313924 27.2793675360714 28.401485412723094 22.066219068891577 44-45 22.20059164426616 27.567955924273146 28.151412039360075 22.08004039210062 46-47 22.360010974869954 27.387097144100547 27.751317949310312 22.501573931719193 48-49 22.330054040244622 27.43053539500544 27.890889167353738 22.3485213973962 50-51 22.179113208658386 27.617977124049766 27.784247669140232 22.41866199815162 52-53 22.35729740755869 27.65137207237853 27.679120100080734 22.31221041998205 54-55 22.348045502923853 27.582775531887048 27.64860747384566 22.420571491343438 56-57 22.45639349773155 27.708313156630265 27.443916200569834 22.391377145068347 58-59 22.279543820928506 27.801026878049107 27.744966359343 22.174462941679387 60-61 22.422491022074716 27.930656143984645 27.425731951538424 22.221120882402214 62-63 22.34874013574534 28.004935552960692 27.36171785691378 22.28460645438019 64-65 22.251450992004738 27.948119632810187 27.37634734971868 22.42408202546639 66-67 22.37924140254677 27.870864699227038 27.239008669817398 22.510885228408792 68-69 22.431716653172735 27.784300409318856 27.39681620482095 22.387166732687454 70-71 22.40636815219862 27.51734833502414 27.383854084320173 22.692429428457064 72-73 22.392478958939467 27.614254884024565 27.422288737244223 22.570977419791745 74-75 22.348963048527693 27.78841511489789 27.284283978196516 22.5783378583779 76-77 22.416645576018688 27.664560865512016 27.25428203613739 22.664511522331907 78-79 22.41809074112993 27.69379158856139 27.21604667494461 22.67207099536407 80-81 22.51963402069967 27.700814049085864 27.136711805336727 22.642840124877743 82-83 22.5332341075055 27.669942587578443 27.332134194950658 22.4646891099654 84-85 22.69909159568868 27.63694643860446 27.1777237381993 22.486238227507556 86-87 22.453575645398264 27.74791666785326 27.249431999731165 22.549075687017307 88-89 22.549288980682043 27.636842010528667 27.267111472051912 22.546757536737374 90-91 22.604077897870678 27.734508386978362 27.228054524918548 22.43335919023241 92-93 22.584706701583826 27.65544693212189 27.28945286166673 22.470393504627555 94-95 22.395843549766788 27.772125276856464 27.314161831717325 22.517869341659424 96-97 22.45567207858262 27.85511459965327 27.443291386202834 22.245921935561277 98-99 23.629375774509896 29.71890350439368 27.602414574400974 19.049306146695454 100 22.61169735457978 30.708822686880882 21.407910856813437 25.2715691017259 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1520.0 1 1377.0 2 1912.5 3 2812.0 4 3940.0 5 6537.0 6 8650.5 7 9797.0 8 10192.5 9 9702.5 10 8866.0 11 8214.0 12 9273.0 13 12522.5 14 19513.0 15 28871.5 16 36918.5 17 42088.5 18 43382.5 19 41025.0 20 36817.5 21 32310.0 22 29805.0 23 30891.0 24 34994.5 25 42453.5 26 53750.0 27 66844.0 28 79920.5 29 96097.5 30 112305.0 31 125908.5 32 142022.0 33 159443.5 34 177523.5 35 195792.5 36 215313.5 37 232767.5 38 241512.5 39 248025.5 40 258938.5 41 268034.5 42 273312.0 43 280963.5 44 290007.0 45 298299.5 46 305537.5 47 312204.0 48 311294.0 49 305746.5 50 301626.5 51 292994.0 52 279544.0 53 262630.0 54 246008.5 55 226955.0 56 205055.0 57 183970.5 58 163628.5 59 142088.0 60 116294.0 61 91427.5 62 70112.5 63 52232.5 64 38403.0 65 27416.5 66 19627.5 67 14640.0 68 10753.5 69 7597.5 70 5438.5 71 3879.5 72 2696.5 73 1789.5 74 1114.0 75 721.0 76 483.5 77 307.0 78 216.5 79 155.5 80 113.0 81 77.5 82 60.0 83 40.0 84 22.5 85 18.0 86 17.0 87 13.5 88 9.0 89 5.0 90 2.5 91 2.0 92 2.0 93 2.0 94 2.0 95 2.0 96 2.0 97 2.0 98 1.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content warn #Base N-Count 1 0.0 2 0.0 3 0.0017074730131180003 4 0.013592027239344079 5 0.009269139214069144 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0015993977589726554 26-27 0.03364989588122969 28-29 0.07884777408807297 30-31 0.07647071238902228 32-33 0.03452856581344436 34-35 0.0014500549999734496 36-37 7.35877415907272 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 3.5758782410598216E-5 56-57 5.756203208363763E-5 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.011737916713248737 74-75 0.034598563785793505 76-77 0.004576661883834842 78-79 0.0 80-81 0.0 82-83 0.0032962448587958142 84-85 0.03721714966256451 86-87 0.04105702314622213 88-89 0.012088648996913327 90-91 4.9873976773024024E-5 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 80.0 20-21 375.0 22-23 758.0 24-25 1575.0 26-27 2582.0 28-29 4338.0 30-31 9175.0 32-33 12147.0 34-35 19133.0 36-37 20981.0 38-39 26262.0 40-41 31984.0 42-43 38855.0 44-45 47800.0 46-47 48014.0 48-49 41987.0 50-51 37018.0 52-53 35469.0 54-55 40064.0 56-57 46061.0 58-59 46731.0 60-61 50304.0 62-63 51061.0 64-65 52364.0 66-67 58045.0 68-69 52393.0 70-71 52418.0 72-73 51348.0 74-75 52351.0 76-77 52726.0 78-79 57107.0 80-81 58775.0 82-83 57706.0 84-85 58665.0 86-87 61824.0 88-89 67956.0 90-91 71716.0 92-93 76784.0 94-95 94491.0 96-97 261594.0 98-99 470020.0 100-101 5058289.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 83.73028223883621 #Duplication Level Percentage of deduplicated Percentage of total 1 88.8725384167002 74.4132272491212 2 7.522676809283063 12.597517048656373 3 2.002980482517886 5.031303633603088 4 0.7359192234592536 2.4647489714091386 5 0.3438624439324132 1.4395849740898474 6 0.1796234206382677 0.902395182404841 7 0.10867437914992148 0.6369535506847255 8 0.06207450598781473 0.41580127249568444 9 0.04141173630589576 0.3120674732003621 >10 0.12716662887253125 1.5580734095688968 >50 0.002399362546459474 0.13262599069525463 >100 6.458589012052002E-4 0.08401756231130932 >500 2.6731705074174283E-5 0.011683681759258619 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 1.355137311998413E-5 0.0 0.0 0.0 3 0.0 1.355137311998413E-5 0.0 0.0 0.0 4 0.0 2.710274623996826E-5 0.0 0.0 0.0 5 0.0 2.710274623996826E-5 0.0 0.0 0.0 6 0.0 2.710274623996826E-5 0.0 0.0 0.0 7 0.0 2.710274623996826E-5 0.0 2.710274623996826E-5 0.0 8 0.0 2.710274623996826E-5 0.0 4.065411935995238E-5 0.0 9 0.0 4.065411935995238E-5 0.0 1.2196235807985716E-4 0.0 10-11 0.0 4.065411935995238E-5 0.0 1.2196235807985716E-4 0.0 12-13 0.0 5.420549247993652E-5 0.0 1.2196235807985716E-4 0.0 14-15 0.0 6.0981179039928585E-5 0.0 1.5584079087981747E-4 0.0 16-17 0.0 6.775686559992065E-5 0.0 1.6261647743980953E-4 0.0 18-19 0.0 6.775686559992065E-5 0.0 1.6261647743980953E-4 0.0 20-21 0.0 6.775686559992065E-5 0.0 1.6939216399980162E-4 0.0 22-23 0.0 8.130823871990478E-5 0.0 1.9649491023976986E-4 0.0 24-25 0.0 1.0163529839988096E-4 0.0 2.1682196991974607E-4 0.0 26-27 0.0 1.0841098495987304E-4 0.0 2.642517758396905E-4 0.0 28-29 0.0 1.0841098495987304E-4 0.0 3.794384473595556E-4 0.0 30-31 0.0 1.2196235807985716E-4 0.0 0.00105023141679877 0.0 32-33 0.0 1.2196235807985716E-4 0.0 0.0027034989374368334 0.0 34-35 0.0 1.2196235807985716E-4 0.0 0.00485816726351431 0.0 36-37 0.0 1.2196235807985716E-4 0.0 0.008767738408629731 0.0 38-39 0.0 1.355137311998413E-4 0.0 0.020076359277256487 0.0 40-41 0.0 1.355137311998413E-4 0.0 0.03202189468252249 0.0 42-43 0.0 1.355137311998413E-4 0.0 0.039719074614673486 0.0 44-45 0.0 1.6939216399980162E-4 0.0 0.04938120364922216 0.0 46-47 0.0 2.0327059679976192E-4 0.0 0.059761555459130006 0.0 48-49 0.0 2.0327059679976192E-4 0.0 0.07088723279063697 0.0 50-51 0.0 2.303733430397302E-4 0.0 0.08185029364470414 0.0 52-53 0.0 2.303733430397302E-4 0.0 0.11194789334418889 0.0 54-55 0.0 2.3714902959972225E-4 0.0 0.1489160392155056 0.0 56-57 0.0 2.5747608927969846E-4 0.0 0.18700217336922098 0.0 58-59 0.0 2.642517758396905E-4 0.0 0.2124177736557512 0.0 60-61 0.0 2.710274623996826E-4 0.0 0.23059016500964993 0.0 62-63 0.0 2.710274623996826E-4 0.0 0.24393826753283432 0.0 64-65 0.0 3.2523295487961907E-4 0.0 0.2488912944081885 0.0 66-67 0.0 3.2523295487961907E-4 0.0 0.25344455577650316 0.0 68-69 0.0 3.2523295487961907E-4 0.0 0.2579707143985779 0.0 70-71 0.0 3.2523295487961907E-4 0.0 0.2620564533942531 0.0 72-73 0.0 3.2523295487961907E-4 0.0 0.2657898566888087 0.0 74-75 0.0 3.2523295487961907E-4 0.0 0.26830363640256577 0.0 76-77 0.0 3.2523295487961907E-4 0.0 0.2708309674894428 0.0 78-79 0.0 3.2523295487961907E-4 1.355137311998413E-5 0.27255876756224073 0.0 80-81 0.0 3.3878432799960324E-4 1.355137311998413E-5 0.273209233472 0.0 82-83 0.0 3.3878432799960324E-4 1.355137311998413E-5 0.2736428774118395 0.0 84-85 0.0 3.3878432799960324E-4 1.355137311998413E-5 0.2738325966355193 0.0 86-87 0.0 3.3878432799960324E-4 1.355137311998413E-5 0.27390712918767923 0.0 88 0.0 3.658870742395715E-4 1.355137311998413E-5 0.2739274562473592 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 9030 0.0 51.76339 1 GTATCAA 16730 0.0 39.60843 1 ATCAACG 20455 0.0 31.701714 3 TCAACGC 20850 0.0 31.16258 4 CAACGCA 20945 0.0 30.996298 5 TATCAAC 21570 0.0 30.282278 2 AACGCAG 22060 0.0 29.544357 6 ACGCAGA 24745 0.0 26.338594 7 CGCAGAG 25225 0.0 25.87149 8 GCAGAGT 29330 0.0 22.133278 9 CTTATAC 6625 0.0 22.00365 1 GTACATG 22675 0.0 21.713964 1 TACATGG 22520 0.0 21.443333 2 ACATGGG 22230 0.0 20.678507 3 CATGGGG 16770 0.0 19.846453 4 TATACAC 8865 0.0 19.499712 3 GAGTACT 18310 0.0 19.147694 12-13 CAGAGTA 28925 0.0 19.10643 10-11 AGAGTAC 27140 0.0 18.95325 10-11 GTACTTT 20055 0.0 17.535646 14-15 >>END_MODULE