##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138915_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7056534 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.6953903998762 33.0 33.0 33.0 33.0 33.0 2 32.69886051707538 33.0 33.0 33.0 33.0 33.0 3 32.71064732345936 33.0 33.0 33.0 33.0 33.0 4 36.6346499570469 37.0 37.0 37.0 37.0 37.0 5 36.64743796317002 37.0 37.0 37.0 37.0 37.0 6 36.5877043885851 37.0 37.0 37.0 37.0 37.0 7 36.56211703932837 37.0 37.0 37.0 37.0 37.0 8 36.560486493794265 37.0 37.0 37.0 37.0 37.0 9 36.60282158351394 37.0 37.0 37.0 37.0 37.0 10-11 36.58188857305868 37.0 37.0 37.0 37.0 37.0 12-13 36.57032163382193 37.0 37.0 37.0 37.0 37.0 14-15 38.66803709866629 40.0 37.0 40.0 37.0 40.0 16-17 38.60427732651752 40.0 37.0 40.0 37.0 40.0 18-19 38.63168887161884 40.0 37.0 40.0 37.0 40.0 20-21 38.64760089057366 40.0 37.0 40.0 37.0 40.0 22-23 38.6410805628709 40.0 37.0 40.0 37.0 40.0 24-25 38.64112106079946 40.0 37.0 40.0 37.0 40.0 26-27 38.55130770652798 40.0 37.0 40.0 37.0 40.0 28-29 38.42459002173632 40.0 37.0 40.0 37.0 40.0 30-31 38.28693192195614 40.0 37.0 40.0 37.0 40.0 32-33 38.166814711809415 40.0 37.0 40.0 37.0 40.0 34-35 38.13060516002696 40.0 37.0 40.0 37.0 40.0 36-37 38.11106319955095 40.0 37.0 40.0 37.0 40.0 38-39 38.05185694428251 40.0 37.0 40.0 37.0 40.0 40-41 38.03091108535567 40.0 37.0 40.0 37.0 40.0 42-43 37.96740809632472 40.0 37.0 40.0 33.0 40.0 44-45 37.8595191475836 40.0 37.0 40.0 33.0 40.0 46-47 37.74911185842043 40.0 37.0 40.0 33.0 40.0 48-49 37.68161816474786 40.0 37.0 40.0 33.0 40.0 50-51 37.634975258431794 40.0 37.0 40.0 33.0 40.0 52-53 37.574202237338724 40.0 37.0 40.0 33.0 40.0 54-55 37.454983184017976 40.0 37.0 40.0 33.0 40.0 56-57 37.27012158711368 38.5 37.0 40.0 33.0 40.0 58-59 37.079467900565064 37.0 37.0 40.0 33.0 40.0 60-61 36.89925118469844 37.0 37.0 40.0 33.0 40.0 62-63 36.75540817823253 37.0 37.0 40.0 33.0 40.0 64-65 36.59060326277595 37.0 37.0 40.0 33.0 40.0 66-67 36.386765922552854 37.0 37.0 40.0 33.0 40.0 68-69 36.18461735379252 37.0 37.0 40.0 33.0 40.0 70-71 35.96056728260521 37.0 37.0 37.0 33.0 40.0 72-73 35.67148266858257 37.0 33.0 37.0 33.0 40.0 74-75 35.31407854634011 37.0 33.0 37.0 33.0 40.0 76-77 33.21833172286885 35.0 33.0 37.0 27.0 37.0 78-79 34.891195297421305 37.0 33.0 37.0 33.0 37.0 80-81 35.11360355931323 37.0 33.0 37.0 33.0 37.0 82-83 34.923334092678544 37.0 33.0 37.0 33.0 37.0 84-85 34.776747338573884 37.0 33.0 37.0 33.0 37.0 86-87 34.67544438440571 37.0 33.0 37.0 33.0 37.0 88-89 34.56924024164722 37.0 33.0 37.0 33.0 37.0 90-91 34.49618622125656 37.0 33.0 37.0 33.0 37.0 92-93 34.45097261109023 37.0 33.0 37.0 33.0 37.0 94-95 34.407794059766445 37.0 33.0 37.0 33.0 37.0 96-97 34.42450054257481 37.0 33.0 37.0 33.0 37.0 98-99 34.477028304788476 37.0 33.0 37.0 33.0 37.0 100 34.46068456392064 37.0 33.0 37.0 33.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 15 1.0 16 0.0 17 2.0 18 2.0 19 8.0 20 43.0 21 187.0 22 851.0 23 2484.0 24 5793.0 25 11608.0 26 21031.0 27 33823.0 28 51196.0 29 72424.0 30 98443.0 31 133359.0 32 178848.0 33 242046.0 34 339011.0 35 516273.0 36 951578.0 37 2227257.0 38 2122351.0 39 47915.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.66102532220851 20.38719297422686 14.518319406994909 23.43346229656972 2 14.62189215900514 20.67365263945232 42.15896262498891 22.545492576553627 3 17.96016762367745 26.38447472911935 30.77430082047513 24.88105682672807 4 12.12351731367231 18.012499906115366 38.89512030908096 30.968862471131363 5 13.059090065900634 37.93901339368781 35.59848724579054 13.403409294621028 6 29.661063065805394 37.952853341314594 18.630123513895064 13.755960078984952 7 26.052265885773384 33.0947034337254 22.94608089467152 17.906949785829703 8 24.590826034424264 36.291003486981005 21.165943507109862 17.952226971484865 9 25.64508298266543 16.53174207054058 21.166538700160732 36.65663624663326 10-11 24.11409032085449 26.574498634740124 28.88759662678494 20.423814417620438 12-13 25.04265508430606 24.285407759079945 28.955797583821013 21.71613957279298 14-15 22.161077945631664 25.632031249335725 26.92461341502783 25.282277390004783 16-17 21.489523043465812 28.664284760762154 27.63846245196296 22.20772974380907 18-19 21.336494658709217 27.406549731071937 29.886414491873776 21.37054111834507 20-21 22.218143152803687 26.717028411864042 29.811270645948866 21.253557789383404 22-23 21.94000915989141 26.744119220033046 29.69506263711757 21.620808982957968 24-25 21.642221323047302 26.849294621372348 30.007602823995157 21.500881231585193 26-27 21.710219078031344 27.088044615471112 29.788421499136152 21.413314807361395 28-29 21.47811440121018 27.037574449992547 29.85236333993913 21.631947808858143 30-31 21.99077205100017 26.894423745946895 29.756233920973752 21.358570282079185 32-33 21.884212826391057 27.035406904328212 29.788732098927923 21.29164817035281 34-35 21.517498999459896 27.14185561068488 29.987791238367006 21.352854151488216 36-37 21.773606301353198 27.04276966667057 29.671600819109667 21.512023212866566 38-39 21.61224541831026 27.160422382647692 29.7276469032788 21.499685295763253 40-41 21.776030726346065 27.07033783063561 29.641856371915665 21.511775071102658 42-43 21.87435786760151 27.095612249226704 29.39776380734555 21.632266075826234 44-45 21.719656501101518 27.51089488129972 29.047570775575753 21.72187784202301 46-47 22.06781883057241 27.210634266477523 28.458118101239236 22.263428801710823 48-49 22.056253395848167 27.35306662654101 28.496911241896804 22.09376873571402 50-51 21.939229256636526 27.61772330835599 28.34488724773839 22.098160187269094 52-53 22.04276950100724 27.7508096584118 28.277006468413727 21.929414372167226 54-55 22.037918432776127 27.66668848093328 28.166247538761517 22.129145547529074 56-57 22.234006536160912 27.86020343097061 27.859883191556644 22.045906841311837 58-59 22.019873446096376 27.948447675081546 28.1525796663198 21.87909921250228 60-61 22.14271349706503 28.125579547358516 27.853671444036593 21.878035511539863 62-63 21.93663982334522 28.163596553619907 27.819719047274937 22.08004457575993 64-65 21.940233500058785 28.032305284187913 27.88674825255652 22.140712963196783 66-67 22.10502455423837 27.960689179816477 27.762199648016622 22.172086617928528 68-69 22.065820531957968 27.85485676992684 27.868414942303872 22.210907755811327 70-71 22.098826068197713 27.52517087504649 27.860343803547188 22.51565925320861 72-73 22.20454320487142 27.56258790502618 27.85541652833145 22.37745236177095 74-75 22.094793635963185 27.722819082242 27.88216273473882 22.300224547056 76-77 22.129711859181818 27.66123136977006 27.738239408526923 22.4708173625212 78-79 22.195302131676744 27.6310616678063 27.64809956338372 22.525536637133236 80-81 22.23140237131567 27.62296263467344 27.72379752276204 22.42183747124885 82-83 22.445029102336743 27.389307771199416 27.825431400506346 22.340231725957494 84-85 22.56650143822246 27.420023661012195 27.605292127128315 22.40818277363703 86-87 22.21537869164601 27.596614911336044 27.733847328264776 22.45415906875317 88-89 22.524185051346045 27.436009805841387 27.661081384222463 22.378723758590105 90-91 22.559484103378384 27.455149000234556 27.687585429606003 22.29778146678105 92-93 22.55403943303735 27.315721990087244 27.62693647178123 22.503302105094175 94-95 22.39721367842474 27.429859978279662 27.71045627455339 22.462470068742206 96-97 22.55894413871232 27.460170932938823 27.852554249761567 22.128330678587293 98-99 22.592467531101708 28.250223295274857 26.958077955404047 22.199231218219392 100 20.79713440467053 27.884273976659436 28.053250575657394 23.26534104301264 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1943.0 1 1808.0 2 2840.5 3 4167.0 4 5468.0 5 9222.0 6 12716.0 7 15484.0 8 17345.0 9 16628.0 10 13982.0 11 11599.5 12 12461.0 13 16809.0 14 27331.5 15 42123.0 16 53768.5 17 59730.0 18 60047.5 19 55486.5 20 48346.0 21 40632.0 22 34899.5 23 33535.5 24 35939.0 25 41829.0 26 51800.0 27 62712.0 28 72863.0 29 84681.5 30 96041.5 31 106725.0 32 121773.5 33 139610.0 34 158014.0 35 174317.5 36 192677.5 37 213067.0 38 224387.0 39 230199.0 40 241058.0 41 251467.5 42 257518.5 43 263896.0 44 271205.0 45 281065.0 46 288704.5 47 294006.5 48 297467.0 49 298388.5 50 294113.0 51 282071.0 52 266167.5 53 249966.5 54 230495.5 55 205093.0 56 180592.0 57 155633.5 58 133262.5 59 115980.5 60 96329.5 61 76080.0 62 58293.5 63 43275.0 64 32037.0 65 23533.5 66 17220.0 67 13026.5 68 9816.0 69 7217.5 70 5248.0 71 3647.5 72 2498.0 73 1731.0 74 1276.0 75 876.0 76 567.5 77 358.0 78 228.0 79 153.5 80 105.5 81 78.0 82 56.5 83 38.0 84 25.5 85 16.5 86 12.0 87 7.0 88 3.5 89 2.0 90 2.5 91 3.0 92 2.5 93 1.5 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 1.4171263115858295E-5 2 0.001530496416512696 3 1.8422642050615784E-4 4 1.4171263115858295E-5 5 1.4171263115858295E-5 6 0.0 7 0.0 8 0.0 9 0.0 10-11 2.834252623171659E-5 12-13 0.007326543030898739 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 2.7641401716743674E-4 26-27 7.089742815325528E-6 28-29 1.418669118126903E-5 30-31 1.4200556590815576E-5 32-33 1.4221094647428844E-5 34-35 6.481477788331745E-4 36-37 0.024952001655853658 38-39 0.1212081326193232 40-41 0.14228987283138486 42-43 0.031140360729938695 44-45 0.0020910557081841316 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.006831937961761749 64-65 0.07116004675186101 66-67 0.17466903640222703 68-69 0.18247228713300562 70-71 0.06916317490759388 72-73 0.0020522920866300905 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86-87 0.0 88-89 0.0 90-91 0.0 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 99.0 20-21 453.0 22-23 988.0 24-25 1878.0 26-27 3053.0 28-29 5721.0 30-31 9864.0 32-33 11124.0 34-35 14220.0 36-37 15543.0 38-39 17227.0 40-41 24103.0 42-43 32492.0 44-45 38923.0 46-47 39520.0 48-49 31613.0 50-51 25488.0 52-53 29487.0 54-55 32702.0 56-57 34646.0 58-59 29415.0 60-61 46399.0 62-63 41088.0 64-65 51371.0 66-67 65845.0 68-69 53385.0 70-71 52824.0 72-73 52107.0 74-75 50584.0 76-77 45679.0 78-79 51322.0 80-81 57805.0 82-83 53804.0 84-85 62092.0 86-87 65776.0 88-89 71686.0 90-91 73943.0 92-93 79775.0 94-95 90943.0 96-97 255920.0 98-99 40811.0 100-101 5294816.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 77.45230902947637 #Duplication Level Percentage of deduplicated Percentage of total 1 84.85474377087235 65.72195837158641 2 9.647816842404529 14.94491383075405 3 2.7927807421148425 6.489219512695474 4 1.2186888605227266 3.775610649439466 5 0.5719171876025266 2.2148153376729955 6 0.31484725506859373 1.4631388137993055 7 0.181516303546394 0.9841199785314484 8 0.11194835083339898 0.6936526611270926 9 0.07285668319611108 0.5078626507591069 >10 0.2280219830137952 2.5576246370570614 >50 0.003224977766889473 0.17094907942292856 >100 0.0011587381529306014 0.1724727482441467 >500 4.415122206821327E-4 0.2572404686648557 >1k 3.679268418278428E-5 0.046421260245734154 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.4171263115858295E-5 2 0.0 0.0 0.0 0.0 1.4171263115858295E-5 3 0.0 0.0 0.0 0.0 1.4171263115858295E-5 4 0.0 0.0 0.0 0.0 1.4171263115858295E-5 5 0.0 0.0 0.0 0.0 1.4171263115858295E-5 6 0.0 0.0 0.0 0.0 2.834252623171659E-5 7 0.0 0.0 0.0 0.0 4.2513789347574884E-5 8 0.0 0.0 0.0 0.0 4.2513789347574884E-5 9 0.0 0.0 0.0 1.4171263115858295E-5 4.2513789347574884E-5 10-11 0.0 0.0 0.0 1.4171263115858295E-5 4.2513789347574884E-5 12-13 0.0 0.0 0.0 1.4171263115858295E-5 4.2513789347574884E-5 14-15 0.0 0.0 0.0 4.2513789347574884E-5 4.959942090550403E-5 16-17 0.0 0.0 0.0 8.502757869514977E-5 5.668505246343318E-5 18-19 0.0 0.0 0.0 9.211321025307892E-5 7.085631557929147E-5 20-21 0.0 0.0 0.0 1.1337010492686636E-4 7.085631557929147E-5 22-23 0.0 0.0 0.0 3.4011031478059907E-4 8.502757869514977E-5 24-25 0.0 0.0 0.0 9.56560260320435E-4 9.919884181100806E-5 26-27 0.0 0.0 0.0 0.0020831756780311694 9.919884181100806E-5 28-29 0.0 0.0 0.0 0.006695921822243045 9.919884181100806E-5 30-31 0.0 0.0 0.0 0.007383228083362172 9.919884181100806E-5 32-33 0.0 7.085631557929147E-6 0.0 0.008502757869514977 1.1337010492686636E-4 34-35 0.0 2.1256894673787442E-5 0.0 0.009735657760594648 1.4171263115858295E-4 36-37 0.0 3.5428157789645736E-5 0.0 0.01115278407218048 1.487982627165121E-4 38-39 0.0 4.2513789347574884E-5 0.0 0.01421377690520587 1.7005515739029953E-4 40-41 0.0 4.959942090550403E-5 0.0 0.017303112264462978 1.7005515739029953E-4 42-43 0.0 7.085631557929147E-5 0.0 0.020555417149552457 1.771407889482287E-4 44-45 0.0 7.085631557929147E-5 0.0 0.02403446224449567 1.8422642050615784E-4 46-47 0.0 9.919884181100806E-5 0.0 0.028413382547295883 1.8422642050615784E-4 48-49 1.4171263115858295E-5 1.3462699960065382E-4 0.0 0.03373469184730067 1.9839768362201612E-4 50-51 1.4171263115858295E-5 1.4171263115858295E-4 0.0 0.038234067886585676 1.9839768362201612E-4 52-53 1.4171263115858295E-5 1.4171263115858295E-4 0.0 0.052291960897517115 2.267402098537327E-4 54-55 1.4171263115858295E-5 1.4171263115858295E-4 0.0 0.07104054199979763 2.5508273608544933E-4 56-57 1.4171263115858295E-5 1.4171263115858295E-4 0.0 0.08679898658463206 2.5508273608544933E-4 58-59 1.4171263115858295E-5 1.4171263115858295E-4 0.0 0.17634011258218268 2.7633963075923674E-4 60-61 1.4171263115858295E-5 1.4171263115858295E-4 0.0 0.2588310351795938 3.117677885488825E-4 62-63 1.4171263115858295E-5 1.4171263115858295E-4 0.0 0.26266436185243347 3.259390516647408E-4 64-65 1.4171263115858295E-5 1.4171263115858295E-4 0.0 0.2657466115801327 3.259390516647408E-4 66-67 1.4171263115858295E-5 1.4171263115858295E-4 0.0 0.27028850140876526 3.471959463385282E-4 68-69 1.4171263115858295E-5 1.4171263115858295E-4 0.0 0.2754822693407273 3.542815778964574E-4 70-71 1.4171263115858295E-5 1.4171263115858295E-4 0.0 0.2797832476963903 3.6136720945438653E-4 72-73 1.4171263115858295E-5 1.4171263115858295E-4 0.0 0.2829080112134371 3.9679536724403225E-4 74-75 1.4171263115858295E-5 1.4171263115858295E-4 0.0 0.2856997500472611 3.9679536724403225E-4 76-77 1.4171263115858295E-5 1.4171263115858295E-4 0.0 0.28832851935525283 3.9679536724403225E-4 78-79 1.4171263115858295E-5 1.4171263115858295E-4 0.0 0.29004324219227173 3.9679536724403225E-4 80-81 1.4171263115858295E-5 1.4171263115858295E-4 0.0 0.2908084904005281 4.1096663035989056E-4 82-83 1.4171263115858295E-5 1.4171263115858295E-4 0.0 0.29130448460958314 4.2513789347574886E-4 84-85 1.4171263115858295E-5 1.4171263115858295E-4 0.0 0.2914745397669734 4.2513789347574886E-4 86-87 1.4171263115858295E-5 1.4171263115858295E-4 0.0 0.2916020811350162 4.2513789347574886E-4 88 1.4171263115858295E-5 1.4171263115858295E-4 0.0 0.29163042366124786 4.2513789347574886E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 11440 0.0 54.73191 1 GTATCAA 21050 0.0 39.403324 1 ATCAACG 26000 0.0 31.22634 3 TCAACGC 26510 0.0 30.675188 4 CAACGCA 26620 0.0 30.499054 5 TATCAAC 27125 0.0 30.22306 2 AACGCAG 27645 0.0 29.419533 6 CTTATAC 6990 0.0 26.264626 1 ACGCAGA 31015 0.0 26.166376 7 CGCAGAG 31185 0.0 26.051838 8 GTACATG 22145 0.0 23.367302 1 TACATGG 21350 0.0 23.231804 2 GCAGAGT 35360 0.0 22.926294 9 TATACAC 9635 0.0 22.0551 3 ACATGGG 22210 0.0 21.956625 3 GAGTACT 25135 0.0 21.198315 12-13 TGGTATC 4880 0.0 21.010212 2 GTGGTAT 5380 0.0 20.767885 1 CAGAGTA 34580 0.0 20.630219 10-11 CATGGGG 16825 0.0 19.921652 4 >>END_MODULE