##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138914_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7684965 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.781669272403974 33.0 33.0 33.0 33.0 33.0 2 32.82877007247268 33.0 33.0 33.0 33.0 33.0 3 33.512260628382826 33.0 33.0 33.0 33.0 37.0 4 36.6496503237165 37.0 37.0 37.0 37.0 37.0 5 36.65156353997708 37.0 37.0 37.0 37.0 37.0 6 36.5977671986795 37.0 37.0 37.0 37.0 37.0 7 36.585026477023646 37.0 37.0 37.0 37.0 37.0 8 36.575324676169636 37.0 37.0 37.0 37.0 37.0 9 36.61616142689004 37.0 37.0 37.0 37.0 37.0 10-11 36.61323877206988 37.0 37.0 37.0 37.0 37.0 12-13 36.84654471425699 37.0 37.0 37.0 37.0 38.5 14-15 38.710548258840475 40.0 37.0 40.0 37.0 40.0 16-17 38.64826385025826 40.0 37.0 40.0 37.0 40.0 18-19 38.6772570206891 40.0 37.0 40.0 37.0 40.0 20-21 38.6937589652187 40.0 37.0 40.0 37.0 40.0 22-23 38.6924866123084 40.0 37.0 40.0 37.0 40.0 24-25 38.67950258179359 40.0 37.0 40.0 37.0 40.0 26-27 38.59238763557873 40.0 37.0 40.0 37.0 40.0 28-29 38.483373986051234 40.0 37.0 40.0 37.0 40.0 30-31 38.35575810916294 40.0 37.0 40.0 37.0 40.0 32-33 38.251657283432706 40.0 37.0 40.0 37.0 40.0 34-35 38.23555086249554 40.0 37.0 40.0 37.0 40.0 36-37 38.21044161963526 40.0 37.0 40.0 37.0 40.0 38-39 38.16710837701224 40.0 37.0 40.0 37.0 40.0 40-41 38.13548872481363 40.0 37.0 40.0 37.0 40.0 42-43 38.07356157491117 40.0 37.0 40.0 37.0 40.0 44-45 37.97273599484397 40.0 37.0 40.0 33.0 40.0 46-47 37.8704809215112 40.0 37.0 40.0 33.0 40.0 48-49 37.80565382719586 40.0 37.0 40.0 33.0 40.0 50-51 37.77068849853693 40.0 37.0 40.0 33.0 40.0 52-53 37.70697739964913 40.0 37.0 40.0 33.0 40.0 54-55 37.59094254312498 40.0 37.0 40.0 33.0 40.0 56-57 37.41614960371169 40.0 37.0 40.0 33.0 40.0 58-59 37.237033742962026 38.5 37.0 40.0 33.0 40.0 60-61 37.065799920329184 37.0 37.0 40.0 33.0 40.0 62-63 36.92172026738522 37.0 37.0 40.0 33.0 40.0 64-65 36.74410540300596 37.0 37.0 40.0 33.0 40.0 66-67 36.532678039830074 37.0 37.0 40.0 33.0 40.0 68-69 36.322459305742925 37.0 37.0 40.0 33.0 40.0 70-71 36.084212106186435 37.0 37.0 38.5 33.0 40.0 72-73 35.78154383459088 37.0 35.0 37.0 33.0 40.0 74-75 35.16964182988805 37.0 33.0 37.0 30.0 40.0 76-77 33.614672470685846 35.0 33.0 37.0 27.0 37.0 78-79 35.0446882213316 37.0 33.0 37.0 33.0 37.0 80-81 35.18302178229982 37.0 33.0 37.0 33.0 37.0 82-83 34.99304002963337 37.0 33.0 37.0 33.0 37.0 84-85 34.85063820833625 37.0 33.0 37.0 33.0 37.0 86-87 34.750243640008904 37.0 33.0 37.0 33.0 37.0 88-89 34.64564358976196 37.0 33.0 37.0 33.0 37.0 90-91 34.58526529052081 37.0 33.0 37.0 33.0 37.0 92-93 34.548198340177876 37.0 33.0 37.0 33.0 37.0 94-95 34.50468068111867 37.0 33.0 37.0 33.0 37.0 96-97 34.51649022086396 37.0 33.0 37.0 33.0 37.0 98-99 34.53445636888728 37.0 33.0 37.0 33.0 37.0 100 34.45964467968954 37.0 33.0 37.0 33.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 1.0 18 3.0 19 10.0 20 58.0 21 236.0 22 792.0 23 2399.0 24 5894.0 25 11933.0 26 21380.0 27 34625.0 28 52107.0 29 74678.0 30 101705.0 31 137888.0 32 183065.0 33 247983.0 34 347991.0 35 522720.0 36 948585.0 37 2308498.0 38 2603903.0 39 78510.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.45550724169987 0.016994285964125142 24.427789639367198 29.099708832968812 2 15.31551144224433 23.411850527843335 39.06627528219136 22.206362747720974 3 17.245932314546856 24.351005080052467 32.61856925735462 25.784493348046055 4 13.085903850688174 22.751414320223233 37.427540324196706 26.735141504891892 5 17.49106436933211 36.4508539012024 32.03118453124829 14.026897198217195 6 28.05379439643439 36.867329502129095 20.25853341668224 14.820342684754282 7 26.607824498875406 33.00402799492255 21.97613131614783 18.412016190054217 8 23.925710507649807 32.34563393473723 22.097595004686426 21.63106055292654 9 23.857832814050106 20.749043064940416 23.590882545525332 31.802241575484143 10-11 24.87143053540318 26.03451061233633 28.287429291918187 20.8066295603423 12-13 25.195398038898137 24.184806142073015 28.53161748252799 22.088178336500857 14-15 22.383706366912538 26.60233325721067 26.92405886038518 24.08990151549161 16-17 21.116563315512824 28.945577501003584 28.00714121664835 21.930717966835243 18-19 21.24081892370362 28.000693562039647 29.868691659623693 20.88979585463304 20-21 22.020354781383812 27.06579870578889 29.91423699241314 20.999609520414158 22-23 21.86469357295155 26.800870726006565 29.777165915321525 21.55726978572036 24-25 21.59949916091747 27.051475250889872 29.98456978687063 21.364455801322027 26-27 21.425665124142178 27.235659797157812 29.949282941016346 21.38939213768366 28-29 21.35769752128996 27.156530908513677 30.066357503985085 21.419414066211274 30-31 21.55510467174871 27.21892750002789 29.940743273757832 21.28522455446557 32-33 21.3191780620521 27.586286658945415 29.71057055065399 21.383964728348495 34-35 21.57043803987667 27.291761305760502 29.637496772420814 21.500303881942013 36-37 21.496742554497086 27.332336958074787 29.742090513188003 21.428829974240124 38-39 21.506365793660425 27.471639950312348 29.65549942769271 21.366494828334513 40-41 21.683807847140756 27.280086966161626 29.574464775891705 21.46164041080591 42-43 21.47444437017635 27.510079679331916 29.344527499209665 21.670948451282072 44-45 21.60705337332848 27.758603686680623 28.948342277416682 21.686000662574216 46-47 21.825688892632996 27.54394507392275 28.66377658902321 21.966589444421043 48-49 21.73325502205051 27.74553812412791 28.648437791757626 21.872769062063956 50-51 21.783182492745798 27.969973792239212 28.362366081785375 21.884477633229615 52-53 21.886046545873462 27.72859164812555 28.308588066040496 22.076773739960487 54-55 21.87401245912104 27.57441229868574 28.47085757003642 22.080717672156805 56-57 21.83113609106921 27.671315382684252 28.305414257933265 22.192134268313275 58-59 21.834172745164153 27.279354792999438 28.496523177702176 22.389949284134232 60-61 21.788813683645973 27.502871788561055 28.722356720815778 21.98595780697719 62-63 21.534206484685022 27.763801533005633 28.611626382831528 22.090365599477813 64-65 21.56167618893129 27.774672331356427 28.43484026962681 22.22881121008547 66-67 21.538553968507713 28.13394182787123 28.13194625337611 22.195557950244947 68-69 21.561027800282538 28.299757433790212 27.929821486853655 22.209393279073588 70-71 21.71984384333441 27.627157630967382 27.898045310160462 22.754953215537746 72-73 21.770226791884575 27.53010706360065 27.878845979104362 22.820820165410417 74-75 21.849360990243003 27.64656102625014 27.89867673775348 22.605401245753377 76-77 22.216281854332735 27.338837544974776 27.52841205200629 22.916468548686197 78-79 22.140652668333015 27.483958540642746 27.38349935168693 22.99188943933731 80-81 22.13724393922288 27.780104758325198 27.247697768853097 22.83495353359883 82-83 22.244885973557484 27.4495653218301 27.383209223973786 22.92233948063863 84-85 22.273434172534134 27.7401093646349 27.384009714111574 22.602446748719395 86-87 22.493284314167838 27.739814327840236 27.38556763655292 22.381333721439006 88-89 22.464699804038048 27.59695636519653 27.501320813372836 22.437023017392587 90-91 22.33678174170003 27.431371423484062 27.542341321742807 22.6895055130731 92-93 22.328907486696657 27.324603111265382 27.661813908036365 22.6846754940016 94-95 22.034317131682606 27.348532015946383 27.99351808125311 22.6236327711179 96-97 22.0924893790356 27.51826347492536 28.13343973397063 22.255807412068414 98-99 23.209068826090906 29.57606777670008 27.815293507603894 19.39956988960512 100 22.33253423844675 29.93161804846787 22.101041988084784 25.634805725000593 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2273.0 1 1956.5 2 2482.5 3 3550.5 4 4752.5 5 7771.5 6 10434.5 7 12670.5 8 14703.5 9 15087.5 10 13963.0 11 12432.5 12 13014.0 13 16290.5 14 24870.0 15 38257.0 16 50260.0 17 57154.5 18 57980.0 19 53688.5 20 46769.5 21 39293.0 22 33669.5 23 32252.5 24 35203.5 25 42299.5 26 52485.5 27 64071.0 28 76603.5 29 91649.0 30 107884.5 31 124642.5 32 144003.5 33 164341.5 34 183825.5 35 202738.5 36 223758.5 37 243502.5 38 257742.0 39 269974.0 40 282683.5 41 293891.5 42 301456.5 43 310462.0 44 320956.5 45 333597.5 46 342886.5 47 341803.0 48 336819.5 49 327255.5 50 312978.0 51 296310.0 52 275763.0 53 252615.0 54 229316.0 55 206623.5 56 184518.5 57 161446.0 58 139678.5 59 119954.0 60 99666.0 61 80656.5 62 63374.0 63 48410.0 64 36182.5 65 26289.5 66 19549.5 67 14790.0 68 11134.5 69 8195.0 70 5885.0 71 4207.0 72 2965.5 73 2047.5 74 1360.5 75 923.0 76 659.5 77 453.5 78 300.0 79 208.0 80 151.5 81 113.0 82 84.5 83 64.0 84 46.5 85 31.0 86 21.5 87 19.0 88 15.0 89 11.5 90 8.5 91 4.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.5 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 3.7736020918768007E-4 2 0.0014183538897054183 3 6.506210503235863E-5 4 1.3012421006471727E-5 5 1.3012421006471727E-5 6 1.3012421006471727E-5 7 0.0 8 2.6024842012943453E-5 9 1.6916147308413247E-4 10-11 0.0014508849422215976 12-13 0.005966195031467287 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 5.857423288255905E-5 24-25 1.8878426190235947E-4 26-27 0.0 28-29 1.3032739283699796E-5 30-31 1.3046824204024673E-5 32-33 7.841042722770722E-5 34-35 0.0023639432774102496 36-37 0.03674127301188999 38-39 0.12714280634706582 40-41 0.1305631446939463 42-43 0.026045370224542175 44-45 0.0017516791549578839 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 1.3770818465152772E-5 60-61 5.190890499341518E-4 62-63 0.013796721158027547 64-65 0.08529324838078126 66-67 0.18098606537268672 68-69 0.1713517656212725 70-71 0.058980393509139445 72-73 0.001869451424695888 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86-87 0.0 88-89 0.0 90-91 0.0 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 377.0 20-21 1559.0 22-23 1657.0 24-25 2573.0 26-27 4404.0 28-29 6863.0 30-31 11946.0 32-33 15057.0 34-35 20798.0 36-37 21976.0 38-39 24620.0 40-41 35255.0 42-43 45484.0 44-45 58485.0 46-47 57113.0 48-49 48565.0 50-51 24866.0 52-53 12677.0 54-55 12047.0 56-57 12470.0 58-59 30886.0 60-61 44466.0 62-63 46374.0 64-65 50064.0 66-67 60439.0 68-69 58754.0 70-71 60770.0 72-73 57700.0 74-75 55775.0 76-77 54374.0 78-79 57492.0 80-81 59454.0 82-83 60110.0 84-85 68935.0 86-87 74764.0 88-89 80924.0 90-91 82958.0 92-93 90753.0 94-95 117030.0 96-97 392204.0 98-99 1448847.0 100-101 4213100.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 83.53367396953743 #Duplication Level Percentage of deduplicated Percentage of total 1 88.12563044414917 73.61457681881498 2 8.383563716016974 14.006197563132108 3 2.0169024558563216 5.054378165275839 4 0.721406987951626 2.410471045235886 5 0.30198366676410454 1.261290258179907 6 0.15901433673600124 0.7969831056832419 7 0.08732667910222901 0.5106302838677609 8 0.05484660760598484 0.3665230910474791 9 0.034765523553508614 0.2613682718909156 >10 0.11099590669443968 1.4212831275063242 >50 0.0027292705818387566 0.14970182053518902 >100 8.085897138663554E-4 0.13214826951041214 >500 2.5815273914620772E-5 0.014448179319942179 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 5.204968402588691E-5 0.0 0.0 0.0 3 0.0 5.204968402588691E-5 0.0 0.0 0.0 4 0.0 5.204968402588691E-5 0.0 0.0 0.0 5 0.0 6.506210503235863E-5 0.0 0.0 0.0 6 0.0 6.506210503235863E-5 0.0 0.0 0.0 7 0.0 6.506210503235863E-5 0.0 2.6024842012943456E-5 0.0 8 0.0 7.807452603883036E-5 0.0 5.204968402588691E-5 0.0 9 0.0 1.43136631071189E-4 0.0 7.807452603883036E-5 0.0 10-11 0.0 1.43136631071189E-4 0.0 2.667546306326704E-4 0.0 12-13 0.0 1.43136631071189E-4 0.0 5.985713662976994E-4 0.0 14-15 0.0 2.1470494660678351E-4 0.0 0.001476909784234541 6.506210503235864E-6 16-17 0.0 2.342235781164911E-4 0.0 0.0028432139899140724 1.3012421006471728E-5 18-19 0.0 2.342235781164911E-4 0.0 0.005933663978951108 1.3012421006471728E-5 20-21 0.0 2.342235781164911E-4 0.0 0.013578461320253248 1.3012421006471728E-5 22-23 0.0 2.7326084113590626E-4 0.0 0.027827062322339786 2.6024842012943453E-5 24-25 0.0 3.2531052516179316E-4 0.0 0.03987656417433261 3.903726301941518E-5 26-27 0.0 3.5133536717473667E-4 0.0 0.051639792764183054 3.903726301941518E-5 28-29 0.0 3.5133536717473667E-4 0.0 0.06769061407566593 3.903726301941518E-5 30-31 0.0 4.2940989321356703E-4 0.0 0.06956440270059785 3.903726301941518E-5 32-33 0.0 4.359161037168029E-4 0.0 0.07247918500604753 3.903726301941518E-5 34-35 0.0 4.944719982459256E-4 0.0 0.07698148267428674 3.903726301941518E-5 36-37 0.0 5.465216822718125E-4 0.0 0.08618126432586226 3.903726301941518E-5 38-39 0.0 5.465216822718125E-4 0.0 0.14810086968515795 3.903726301941518E-5 40-41 0.0 6.376086293171146E-4 0.0 0.19726179624760815 3.903726301941518E-5 42-43 0.0 7.221893658591809E-4 0.0 0.21199836303743738 3.903726301941518E-5 44-45 0.0 8.067701024012472E-4 0.0 0.23241485159659153 4.554347352265104E-5 46-47 0.0 8.067701024012472E-4 0.0 0.25830956939947025 5.204968402588691E-5 48-49 0.0 8.262887339109547E-4 0.0 0.2847638213056273 6.506210503235863E-5 50-51 0.0 9.499067334724361E-4 0.0 0.3321550586111973 6.506210503235863E-5 52-53 0.0 9.499067334724361E-4 0.0 0.6210633360073858 6.506210503235863E-5 54-55 0.0 9.95450206995087E-4 0.0 1.0107202830461817 6.506210503235863E-5 56-57 0.0 0.0010409936805177381 0.0 1.4504295074863711 6.506210503235863E-5 58-59 0.0 0.0010409936805177381 0.0 1.910236416171056 6.506210503235863E-5 60-61 0.0 0.001047499891020974 0.0 2.0238738888205736 6.506210503235863E-5 62-63 0.0 0.00105400610152421 0.0 2.0286689659614585 6.506210503235863E-5 64-65 0.0 0.0011841303115889272 0.0 2.0331322263666785 6.506210503235863E-5 66-67 0.0 0.0011841303115889272 0.0 2.037426325298814 6.506210503235863E-5 68-69 0.0 0.001190636522092163 0.0 2.0416813869679302 6.506210503235863E-5 70-71 0.0 0.0012036489430986346 0.0 2.04525980274471 9.10869470453021E-5 72-73 0.0 0.0012101551536018707 0.0 2.0485389328383405 9.10869470453021E-5 74-75 0.0 0.0012296737851115783 0.0 2.0510503300925897 9.10869470453021E-5 76-77 0.0 0.0012752172586342292 0.0 2.0536463080833807 9.10869470453021E-5 78-79 0.0 0.0013012421006471727 0.0 2.0552208110251637 9.10869470453021E-5 80-81 0.0 0.0013012421006471727 0.0 2.055799863759952 9.759315754853796E-5 82-83 0.0 0.0013142545216536445 0.0 2.056489522073295 1.0409936805177383E-4 84-85 0.0 0.0013272669426601163 0.0 2.0568603760719792 1.0409936805177383E-4 86-87 0.0 0.0013272669426601163 0.0 2.0570230313345603 1.0409936805177383E-4 88 0.0 0.0013923290476924748 0.0 2.0570295375450636 1.0409936805177383E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCTCGT 4600 0.0 34.847775 94 TATCTCG 5355 0.0 32.168518 94 GGTATCA 23430 0.0 32.15833 1 GTATCAA 33820 0.0 27.159552 1 ATCAACG 34260 0.0 25.76815 3 TCAACGC 35270 0.0 25.017897 4 CAACGCA 35840 0.0 24.584356 5 AACGCAG 36045 0.0 24.482063 6 ACGCAGA 36435 0.0 24.243916 7 CGCTATC 8140 0.0 23.023972 94 GTACATG 29915 0.0 22.62464 1 TATCAAC 40170 0.0 22.606155 2 ACATGGG 28570 0.0 22.470053 3 TACATGG 29590 0.0 22.402277 2 CGCAGAG 41620 0.0 21.181759 8 GAGTACT 23950 0.0 21.122192 12-13 GCAGAGT 46305 0.0 18.98209 9 CAGAGTA 41195 0.0 18.978886 10-11 GTACTTT 26580 0.0 18.926947 14-15 AGAGTAC 37095 0.0 18.734072 10-11 >>END_MODULE