##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138908_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 8734686 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.699910105526406 33.0 33.0 33.0 33.0 33.0 2 32.702788972608744 33.0 33.0 33.0 33.0 33.0 3 32.708413444971 33.0 33.0 33.0 33.0 33.0 4 36.64222629182091 37.0 37.0 37.0 37.0 37.0 5 36.65465890817369 37.0 37.0 37.0 37.0 37.0 6 36.601140098224484 37.0 37.0 37.0 37.0 37.0 7 36.57836423656214 37.0 37.0 37.0 37.0 37.0 8 36.58069322698034 37.0 37.0 37.0 37.0 37.0 9 36.61622226603223 37.0 37.0 37.0 37.0 37.0 10-11 36.60009312298118 37.0 37.0 37.0 37.0 37.0 12-13 36.59149304279512 37.0 37.0 37.0 37.0 37.0 14-15 38.69721401547806 40.0 37.0 40.0 37.0 40.0 16-17 38.6375345948326 40.0 37.0 40.0 37.0 40.0 18-19 38.675376023820434 40.0 37.0 40.0 37.0 40.0 20-21 38.692508918964045 40.0 37.0 40.0 37.0 40.0 22-23 38.69161010279957 40.0 37.0 40.0 37.0 40.0 24-25 38.69231898939876 40.0 37.0 40.0 37.0 40.0 26-27 38.61076847818589 40.0 37.0 40.0 37.0 40.0 28-29 38.50031208032884 40.0 37.0 40.0 37.0 40.0 30-31 38.35903182696889 40.0 37.0 40.0 37.0 40.0 32-33 38.247892674800894 40.0 37.0 40.0 37.0 40.0 34-35 38.225495748609646 40.0 37.0 40.0 37.0 40.0 36-37 38.218343440149106 40.0 37.0 40.0 37.0 40.0 38-39 38.17437363809702 40.0 37.0 40.0 37.0 40.0 40-41 38.15549743328599 40.0 37.0 40.0 37.0 40.0 42-43 38.106045558221766 40.0 37.0 40.0 37.0 40.0 44-45 38.00449004577328 40.0 37.0 40.0 33.0 40.0 46-47 37.90671298833343 40.0 37.0 40.0 33.0 40.0 48-49 37.83953462517793 40.0 37.0 40.0 33.0 40.0 50-51 37.82633602420562 40.0 37.0 40.0 33.0 40.0 52-53 37.770514044477096 40.0 37.0 40.0 33.0 40.0 54-55 37.66905676832849 40.0 37.0 40.0 33.0 40.0 56-57 37.50336966007066 40.0 37.0 40.0 33.0 40.0 58-59 37.32040676920269 38.5 37.0 40.0 33.0 40.0 60-61 37.16606979738033 37.0 37.0 40.0 33.0 40.0 62-63 37.03463388157415 37.0 37.0 40.0 33.0 40.0 64-65 36.86677179099035 37.0 37.0 40.0 33.0 40.0 66-67 36.66119668853713 37.0 37.0 40.0 33.0 40.0 68-69 36.45610860245378 37.0 37.0 40.0 33.0 40.0 70-71 36.24524960323267 37.0 37.0 40.0 33.0 40.0 72-73 35.96197712887286 37.0 37.0 37.0 33.0 40.0 74-75 35.6061837970473 37.0 33.0 37.0 33.0 40.0 76-77 33.50892562074063 35.0 33.0 37.0 27.0 37.0 78-79 35.136534642024785 37.0 33.0 37.0 33.0 37.0 80-81 35.33657171442702 37.0 33.0 37.0 33.0 37.0 82-83 35.128234087710965 37.0 33.0 37.0 33.0 37.0 84-85 34.97612046922183 37.0 33.0 37.0 33.0 37.0 86-87 34.87499701111638 37.0 33.0 37.0 33.0 37.0 88-89 34.76824806362859 37.0 33.0 37.0 33.0 37.0 90-91 34.69561547022549 37.0 33.0 37.0 33.0 37.0 92-93 34.657879101042376 37.0 33.0 37.0 33.0 37.0 94-95 34.60979497815123 37.0 33.0 37.0 33.0 37.0 96-97 34.619463182212606 37.0 33.0 37.0 33.0 37.0 98-99 34.64562020208486 37.0 33.0 37.0 33.0 37.0 100 34.59337845652628 37.0 33.0 37.0 33.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 1.0 18 3.0 19 14.0 20 45.0 21 197.0 22 755.0 23 2254.0 24 5672.0 25 11773.0 26 21170.0 27 34956.0 28 53529.0 29 77135.0 30 106200.0 31 145296.0 32 196306.0 33 269628.0 34 380617.0 35 576302.0 36 1054457.0 37 2644123.0 38 3058779.0 39 95473.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.187582472913164 21.00018249081879 14.782672210540825 23.029562825727222 2 14.103198924635777 20.905946960620312 43.51768710138806 21.47316701335584 3 17.31995355981681 27.323219851174805 31.274653888174687 24.082172700833702 4 11.732304973527382 18.031146168276685 40.559134008938614 29.677414849257318 5 12.308891241196307 38.41983558424425 36.36682532148265 12.904447853076803 6 28.260798384738727 39.39921824322019 19.072534490650263 13.267448881390814 7 25.205073198967888 33.61896466570178 24.243241256754967 16.93272087857537 8 23.5849348219272 37.3375986268997 21.590793303846297 17.486673247326806 9 25.370414002289266 17.055873559736433 22.222458826796977 35.35125361117733 10-11 23.60226029967317 27.46969337465901 29.49258888345398 19.435457442213842 12-13 24.42604015998595 24.93195284598141 29.81251925660323 20.82948773742941 14-15 21.610771125601996 26.1455763836273 28.042026925753255 24.201625565017448 16-17 20.3835856702331 29.25497599512747 28.833232108541978 21.52820622609745 18-19 20.300022267545998 28.24954191250171 31.05158915290019 20.398846667052105 20-21 21.454535504404767 27.48458876987051 30.92977086100987 20.131104864714853 22-23 21.029131327125597 27.1421300762275 30.940360499099757 20.888378097547154 24-25 20.58305424104332 27.33076918276017 31.336116440446883 20.75006013574962 26-27 20.517627428691085 27.687331827244687 31.079771398172657 20.715269345891567 28-29 20.412080446296795 27.984440175376402 30.994201914845505 20.609277463481302 30-31 20.998004120307375 27.64080179742226 30.80049415224294 20.560699930027425 32-33 20.721644923695514 27.948599039752796 30.652345513412733 20.677410523138953 34-35 20.685453878011145 27.93697458211115 30.76501127395423 20.61256026592347 36-37 20.89366218163397 27.660862438517725 30.80176480066586 20.643710579182446 38-39 20.68483976580638 28.015841336045305 30.752638458131425 20.54668044001689 40-41 21.001637796525532 27.92354429077798 30.49028458725332 20.584533325443168 42-43 21.026902360989403 27.981922738075514 30.182128236684306 20.809046664250776 44-45 20.95371534805598 28.457341911732286 29.818182078162188 20.770760662049543 46-47 21.09542872958507 28.072561574964283 29.48874829062496 21.343261404825686 48-49 21.265396381830513 28.17912655131017 29.431719008630218 21.123758058229104 50-51 20.985461144886415 28.38867274654856 29.191554773367645 21.434311335197375 52-53 21.197525115830434 28.444633089028038 28.85872056837952 21.499121226762007 54-55 21.332649840311177 28.268444991238862 28.93070002112615 21.46820514732381 56-57 21.387364578946215 28.33877271137692 28.777812768721745 21.496049940955128 58-59 21.169769546200126 28.364951340842104 29.150229379984317 21.315049732973453 60-61 21.22889906718352 28.5108616000374 28.807836044646724 21.452403288132356 62-63 21.367794901228763 28.4281222895402 28.7090748596166 21.495007949614433 64-65 21.16455661162509 28.51008089500104 28.74097016568354 21.584392327690335 66-67 21.470085373943206 28.600418122586813 28.27331145907936 21.656185044390618 68-69 21.284550953178623 28.480538880109208 28.66507409793154 21.569836068780624 70-71 21.475361127034482 27.825541219520083 28.728714788926133 21.970382864519298 72-73 21.59336707133504 28.071728695720566 28.63192479398356 21.702979438960835 74-75 21.211766076636902 28.42742802665887 28.58095173538006 21.779854161324167 76-77 21.419773177190006 28.275759984566623 28.39454227121742 21.90992456702595 78-79 21.52284605814199 28.386334855200452 28.26148204307884 21.829337043578718 80-81 21.48048359477609 28.13156429820326 28.396383459605275 21.99156864741538 82-83 21.765453494761562 27.94730558571834 28.51584751914555 21.771393400374546 84-85 22.10123565381031 27.99010214250303 28.22122672880688 21.687435474879774 86-87 21.3974464596056 28.247939541581868 28.383298653992185 21.971315344820347 88-89 21.80704229180677 28.080583689269723 28.354341812527473 21.758032206396035 90-91 21.94486719435431 27.930651825501606 28.514530461333692 21.609950518810393 92-93 22.04728777008647 27.93979882132759 28.23456190416055 21.778351504425398 94-95 21.6987555267636 27.998177584536826 28.33531826963782 21.96774861906175 96-97 21.6301662346786 28.14298686866539 28.58611132769583 21.64073556896018 98-99 22.781114324685966 30.092580469143638 28.684787885151668 18.441517321018726 100 22.135903499254226 30.780976687861255 22.447452498260823 24.635667314623692 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2591.0 1 2371.0 2 3678.0 3 5527.0 4 7674.0 5 13173.0 6 17777.5 7 20770.0 8 22451.5 9 21276.5 10 18402.0 11 15877.0 12 17368.5 13 23505.5 14 37645.5 15 57761.5 16 74276.0 17 83012.0 18 83389.0 19 76738.5 20 67111.0 21 57226.5 22 50940.0 23 51043.0 24 56620.5 25 69049.5 26 90216.5 27 113155.5 28 126637.5 29 141265.0 30 155478.5 31 168203.5 32 192310.0 33 220907.5 34 253617.5 35 283778.0 36 315360.0 37 343098.5 38 344139.5 39 341071.5 40 354066.0 41 358917.5 42 356865.0 43 365667.0 44 372169.5 45 376820.5 46 380656.0 47 381682.0 48 379966.0 49 367404.5 50 346944.5 51 319526.5 52 286910.0 53 255578.0 54 225733.5 55 197331.5 56 170216.5 57 145341.5 58 123957.5 59 107241.5 60 87686.0 61 65088.0 62 48675.5 63 36493.5 64 27035.5 65 19530.0 66 14386.0 67 11335.5 68 9036.0 69 7092.0 70 5584.5 71 4233.5 72 3201.5 73 2423.0 74 1781.0 75 1311.5 76 967.0 77 657.0 78 426.0 79 284.0 80 212.0 81 152.5 82 96.5 83 63.5 84 38.5 85 26.0 86 23.0 87 18.0 88 13.0 89 9.5 90 6.5 91 4.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.001797431527590116 3 1.0303747610389201E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 4.0070129595957996E-5 12-13 0.007659119057055973 14-15 0.0 16-17 1.1448608455988E-5 18-19 1.1448608455988E-5 20-21 1.144890533867608E-5 22-23 0.0 24-25 2.920175457883512E-4 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 7.386836691641292E-4 36-37 0.02642908727051501 38-39 0.1252508775251606 40-41 0.14766353956831832 42-43 0.032866608983779924 44-45 0.002567781844590813 46-47 1.2036261645459276E-5 48-49 6.0791585471905314E-6 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.007551883650517784 64-65 0.07884333467496255 66-67 0.19033426480216242 68-69 0.1981259458124648 70-71 0.07446921027381864 72-73 0.0023028975568815694 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86-87 0.0 88-89 0.0 90-91 0.0 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 122.0 20-21 578.0 22-23 1195.0 24-25 2224.0 26-27 3957.0 28-29 8988.0 30-31 20606.0 32-33 25476.0 34-35 32600.0 36-37 44869.0 38-39 49898.0 40-41 60150.0 42-43 71289.0 44-45 82527.0 46-47 86749.0 48-49 70717.0 50-51 58369.0 52-53 53895.0 54-55 54372.0 56-57 55990.0 58-59 62492.0 60-61 64376.0 62-63 69096.0 64-65 72404.0 66-67 81616.0 68-69 77671.0 70-71 77979.0 72-73 79081.0 74-75 75530.0 76-77 69684.0 78-79 74582.0 80-81 81147.0 82-83 76072.0 84-85 82448.0 86-87 93378.0 88-89 102564.0 90-91 104535.0 92-93 102543.0 94-95 111366.0 96-97 275987.0 98-99 526716.0 100-101 5588848.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 78.0764377235304 #Duplication Level Percentage of deduplicated Percentage of total 1 86.38210142512732 67.4440676234664 2 8.629183858340701 13.474718722412632 3 2.4925410800598273 5.838261852318969 4 1.052855542962803 3.2881284092803624 5 0.5231646976680411 2.042341796831421 6 0.30708385598662 1.438560813470455 7 0.17623310857739696 0.9631757328667112 8 0.10768907542475512 0.6726383512724368 9 0.07726825750031331 0.5429547265256032 >10 0.2415233652268848 2.8611918490972426 >50 0.006129484127231149 0.32565569516152104 >100 0.003648827152758328 0.5521800781872455 >500 2.56631936718576E-4 0.14917477480443092 >1k 3.2078990868095815E-4 0.4069495743045536 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 1.1448608455988E-5 0.0 3 0.0 0.0 0.0 1.1448608455988E-5 0.0 4 0.0 0.0 0.0 3.4345825367964E-5 0.0 5 0.0 0.0 0.0 4.5794433823952E-5 0.0 6 0.0 0.0 0.0 4.5794433823952E-5 0.0 7 0.0 0.0 0.0 4.5794433823952E-5 0.0 8 0.0 0.0 0.0 4.5794433823952E-5 0.0 9 0.0 0.0 0.0 6.8691650735928E-5 0.0 10-11 0.0 0.0 0.0 1.0876178033188599E-4 0.0 12-13 0.0 0.0 0.0 1.31658997243862E-4 0.0 14-15 0.0 0.0 0.0 2.23247864891766E-4 0.0 16-17 0.0 0.0 0.0 2.69042298715718E-4 0.0 18-19 0.0 0.0 0.0 3.3200964522365204E-4 0.0 20-21 0.0 0.0 0.0 4.92290163607484E-4 5.724304227994E-6 22-23 0.0 0.0 0.0 8.586456341991E-4 1.1448608455988E-5 24-25 0.0 0.0 0.0 0.00194626343751796 1.1448608455988E-5 26-27 0.0 0.0 0.0 0.00417874208643562 1.1448608455988E-5 28-29 0.0 0.0 0.0 0.01199241735764743 1.1448608455988E-5 30-31 0.0 0.0 0.0 0.01485456947164443 1.1448608455988E-5 32-33 0.0 0.0 0.0 0.020424317485482592 1.1448608455988E-5 34-35 0.0 0.0 0.0 0.02753962764087913 1.1448608455988E-5 36-37 0.0 0.0 0.0 0.03895389027149917 1.1448608455988E-5 38-39 0.0 0.0 0.0 0.06753534128187322 1.1448608455988E-5 40-41 0.0 0.0 0.0 0.09778256482259351 1.1448608455988E-5 42-43 0.0 0.0 0.0 0.11719368045972116 1.1448608455988E-5 44-45 0.0 0.0 0.0 0.13876858309503054 1.1448608455988E-5 46-47 0.0 0.0 0.0 0.15890668536911345 1.1448608455988E-5 48-49 0.0 0.0 0.0 0.18085939208347043 1.1448608455988E-5 50-51 0.0 0.0 0.0 0.20069983053769763 1.1448608455988E-5 52-53 0.0 0.0 0.0 0.2668727874133083 1.1448608455988E-5 54-55 0.0 0.0 0.0 0.34966339946278546 1.1448608455988E-5 56-57 0.0 0.0 0.0 0.41870423275662116 1.1448608455988E-5 58-59 0.0 2.2897216911976E-5 0.0 0.44359923184416705 1.1448608455988E-5 60-61 0.0 2.2897216911976E-5 0.0 0.4614189909059123 1.1448608455988E-5 62-63 0.0 2.2897216911976E-5 0.0 0.4755751952617415 1.1448608455988E-5 64-65 0.0 2.2897216911976E-5 0.0 0.48134529392355946 1.1448608455988E-5 66-67 0.0 2.2897216911976E-5 0.0 0.4867833829401538 1.1448608455988E-5 68-69 0.0 2.2897216911976E-5 0.0 0.49237602817090387 1.1448608455988E-5 70-71 0.0 2.2897216911976E-5 0.0 0.497081406246315 1.1448608455988E-5 72-73 0.0 2.2897216911976E-5 0.0 0.500910965774843 1.1448608455988E-5 74-75 0.0 2.2897216911976E-5 0.0 0.5042081650101675 1.1448608455988E-5 76-77 0.0 2.2897216911976E-5 0.0 0.507516812853948 1.1448608455988E-5 78-79 0.0 2.2897216911976E-5 0.0 0.509503146421062 1.1448608455988E-5 80-81 0.0 2.2897216911976E-5 0.0 0.5102015115368772 1.1448608455988E-5 82-83 0.0 2.2897216911976E-5 0.0 0.5106995260047127 1.1448608455988E-5 84-85 0.0 2.2897216911976E-5 0.0 0.5109571196949725 1.1448608455988E-5 86-87 0.0 2.2897216911976E-5 0.0 0.5110773300837603 1.1448608455988E-5 88 0.0 2.2897216911976E-5 0.0 0.5111002273006723 1.1448608455988E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 14540 0.0 53.20516 1 GTATCAA 27820 0.0 40.38482 1 ATCAACG 35405 0.0 31.277401 3 TCAACGC 35930 0.0 30.820381 4 TATCAAC 36510 0.0 30.563448 2 CAACGCA 36275 0.0 30.503874 5 AACGCAG 37330 0.0 29.713701 6 ACGCAGA 41265 0.0 26.80827 7 CGCAGAG 41680 0.0 26.541346 8 GCAGAGT 46625 0.0 23.535347 9 GTGGTAT 6410 0.0 22.496462 1 TACATGG 28795 0.0 22.005276 2 TGGTATC 6470 0.0 21.238998 2 ACATGGG 29175 0.0 21.166002 3 GAGTACT 32375 0.0 20.555538 12-13 GTACATG 31440 0.0 20.464273 1 CAGAGTA 46370 0.0 20.088074 10-11 AGAGTAC 44770 0.0 19.981705 10-11 CATGGGG 19030 0.0 19.411884 4 AGTACTT 35135 0.0 18.693342 12-13 >>END_MODULE