##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138902_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 81243089 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.2311576803782 33.0 31.0 34.0 30.0 34.0 2 32.26563907485103 34.0 31.0 34.0 30.0 34.0 3 32.367278120111855 34.0 31.0 34.0 30.0 34.0 4 35.964162748661614 37.0 35.0 37.0 35.0 37.0 5 35.899287679718825 37.0 35.0 37.0 35.0 37.0 6 35.971612686957286 37.0 35.0 37.0 35.0 37.0 7 35.90604952256308 37.0 35.0 37.0 35.0 37.0 8 35.91011049567552 37.0 35.0 37.0 35.0 37.0 9 37.5983929660774 39.0 37.0 39.0 35.0 39.0 10-11 37.54826430221037 39.0 37.0 39.0 35.0 39.0 12-13 37.51592925645651 39.0 37.0 39.0 35.0 39.0 14-15 38.84635669749091 40.0 38.0 41.0 35.0 41.0 16-17 38.8522255659186 40.0 38.0 41.0 35.0 41.0 18-19 38.90823162816963 40.0 38.0 41.0 35.0 41.0 20-21 38.92477564985366 40.0 38.0 41.0 35.0 41.0 22-23 38.89249507883429 40.0 38.0 41.0 35.0 41.0 24-25 38.86617665402158 40.0 38.0 41.0 34.0 41.0 26-27 38.77360456508303 40.0 38.0 41.0 34.0 41.0 28-29 38.68821779734326 40.0 38.0 41.0 34.0 41.0 30-31 38.58908189422368 40.0 38.0 41.0 34.0 41.0 32-33 38.50139867072331 40.0 38.0 41.0 34.0 41.0 34-35 38.28750055325336 40.0 38.0 41.0 33.5 41.0 36-37 38.304572544847865 40.0 38.0 41.0 33.5 41.0 38-39 38.33939897200334 40.0 38.0 41.0 34.0 41.0 40-41 38.32048325446252 40.0 38.0 41.0 33.0 41.0 42-43 38.23821042001217 40.0 38.0 41.0 33.0 41.0 44-45 38.21820736376115 40.0 38.0 41.0 33.0 41.0 46-47 38.1521316018101 40.0 37.0 41.0 33.0 41.0 48-49 38.08822577122298 40.0 37.0 41.0 33.0 41.0 50-51 37.994792681612175 40.0 37.0 41.0 33.0 41.0 52-53 37.91476842702005 40.0 37.0 41.0 33.0 41.0 54-55 37.77305777986503 40.0 36.5 41.0 33.0 41.0 56-57 37.61792724741083 39.5 36.0 41.0 32.0 41.0 58-59 37.4480108596192 39.0 36.0 41.0 32.0 41.0 60-61 37.250994087067966 39.0 35.0 41.0 32.0 41.0 62-63 37.025724998884996 39.0 35.0 41.0 31.5 41.0 64-65 36.763582709530596 38.0 35.0 40.0 31.0 41.0 66-67 36.374159596978515 37.5 35.0 40.0 31.0 41.0 68-69 36.13804972904862 37.0 35.0 40.0 31.0 41.0 70-71 35.885008209878315 36.5 35.0 39.0 31.0 41.0 72-73 35.49466338848047 36.0 34.0 39.0 30.0 41.0 74-75 35.25954694736521 35.5 34.0 38.5 30.0 40.0 76-77 34.96761563026675 35.0 34.0 37.0 30.0 39.5 78-79 34.66013994621793 35.0 34.0 37.0 30.0 39.0 80-81 34.23823456063609 35.0 34.0 36.5 29.5 39.0 82-83 33.88378341789222 35.0 33.5 36.0 29.5 37.5 84-85 33.83793221324595 35.0 34.0 36.0 29.5 37.0 86-87 33.890306843483614 35.0 34.0 35.0 30.0 37.0 88-89 33.850511298178326 35.0 34.0 35.0 30.0 36.0 90-91 33.56827717132688 35.0 34.0 35.0 29.5 36.0 92-93 33.515193531200545 35.0 34.0 35.0 30.0 36.0 94-95 33.51008943163827 35.0 34.0 35.0 30.0 36.0 96-97 33.52683108941902 35.0 34.0 35.0 30.0 35.5 98-99 33.647343713717646 35.0 34.0 35.0 30.0 35.0 100 33.3729503485198 35.0 33.0 35.0 30.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 3.0 18 13.0 19 109.0 20 505.0 21 2827.0 22 12588.0 23 43663.0 24 112118.0 25 235526.0 26 415992.0 27 651162.0 28 922316.0 29 1217002.0 30 1542965.0 31 1915389.0 32 2380944.0 33 3008185.0 34 3980152.0 35 5546244.0 36 8655993.0 37 1.627342E7 38 2.2013461E7 39 1.160584E7 40 706672.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.35324544343704 20.20151892550516 13.360992465463738 25.08424316559406 2 14.69116363474515 22.20815141837051 39.622915367274075 23.477769579610268 3 17.193750473963394 27.577602323811195 31.136713671731513 24.091933530493897 4 12.425907390104284 18.93700767581597 38.909339106985456 29.72774582709429 5 12.739798169191749 38.50423685081078 35.570780816589846 13.185184163407628 6 28.577506451041025 39.20681917941353 18.916727796994522 13.298946572550928 7 25.10038607714682 33.50199055085166 23.89071764614957 17.506905725851954 8 24.70998363934685 35.868185661921345 21.569065400750578 17.852765297981225 9 25.860972617621663 15.939973675791672 20.85349068891263 37.34556301767403 10-11 23.74250697938775 26.584708943756652 29.43922874186481 20.233555334990793 12-13 25.118733739497628 24.41716430341447 29.18149619066958 21.28260576641832 14-15 22.476291456274677 25.35341198496002 26.74473681293601 25.425559745829297 16-17 21.80869701611591 28.49707834514838 27.19132115336412 22.502903485371586 18-19 21.955770908710768 27.51014981717399 29.022713550441193 21.511365723674047 20-21 22.757683902087706 26.6278909873374 28.84807007289006 21.766355037684836 22-23 22.486251074037934 26.578381698940834 28.78945339053788 22.14591383648336 24-25 22.249118374921586 26.874368344741534 28.77823173976384 22.09828154057304 26-27 22.207254777956795 26.889174522624398 28.78212081410189 22.121449885316917 28-29 22.149012982660622 26.700307659784194 28.84389734355276 22.306782014002422 30-31 22.419998683629323 26.612183615680024 28.738626081946173 22.229191618744476 32-33 22.241533828807533 26.883998874547327 28.69714128760541 22.177326009039728 34-35 22.49691939557675 26.947060867342227 28.65342422904008 21.902595508040946 36-37 22.472260734215705 26.80922347649784 28.50693421021331 22.211581579073144 38-39 22.365469170338017 26.875695505482515 28.564667515304553 22.19416780887492 40-41 22.50694106734621 26.705563829857148 28.529855333358196 22.257639769438445 42-43 22.502734308245202 26.810256527885702 28.2957812796721 22.391227884197 44-45 22.41798353195988 26.976091262629392 28.12286940209438 22.483055803316343 46-47 22.729766885670006 26.919109461308544 27.681991741062827 22.669131911958626 48-49 22.59220047764013 27.094083374510607 27.588625858647315 22.725090289201948 50-51 22.557840979146484 27.243007050388933 27.49369121981957 22.705460750645006 52-53 22.71830195555509 27.150781116794743 27.456015487238965 22.674901440411197 54-55 22.66108021478603 27.063395222134684 27.475061842439573 22.800462720639715 56-57 22.699846364638997 27.186388830810422 27.40606169440616 22.70770311014443 58-59 22.571079462478533 27.288512255329106 27.485814572236773 22.654593709955588 60-61 22.813818468267748 27.33985909651541 27.313973358174138 22.532349077042703 62-63 22.631049429866035 27.540272414869253 27.238783558722286 22.589894596542422 64-65 22.636275749870347 27.41627567282734 27.203042205674084 22.744406371628234 66-67 22.76744195603864 27.481266171195003 27.11518953259607 22.636102340170297 68-69 22.635936778768972 27.324757291314977 27.21035097827783 22.828954951638224 70-71 22.730887366065474 27.03423096862275 27.30258685986204 22.932294805449736 72-73 22.83276365030769 27.100164179410758 27.133868877827044 22.933203292454508 74-75 22.5754665250394 27.226244629240874 27.241860211837515 22.956428633882208 76-77 22.75763179015502 27.1151590077202 27.169356629259507 22.95785257286527 78-79 22.698547164120146 27.182180893660025 27.110008147252884 23.009263794966945 80-81 22.877587333391183 27.231996853272733 26.991915939473206 22.898499873862878 82-83 22.895068013227633 27.163451927660848 27.08921453981421 22.85226551929731 84-85 22.770521341242365 27.173926159104372 27.162853395129005 22.892699104524258 86-87 22.670740689193167 27.20190883583068 27.214175997505713 22.913174477470438 88-89 22.68366470927709 27.172503446575334 27.162716848253588 22.981114995893986 90-91 22.901765125161877 27.147295733371568 27.184478054058204 22.76646108740835 92-93 22.839338463970773 27.13072353260646 27.16209174746166 22.867846255961112 94-95 22.633588229757084 27.17829294226971 27.249386999532817 22.93873182844039 96-97 22.721359281782405 27.31500129204762 27.293795391881908 22.66984403428807 98-99 23.786858831613785 29.24437605519078 27.411608923043175 19.557156190152263 100 22.798184953623295 30.163115367861437 21.23275375438181 25.80594592413346 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 27793.0 1 25830.5 2 36428.0 3 49747.5 4 60187.5 5 97073.0 6 132366.0 7 161053.0 8 182440.5 9 174274.0 10 138080.0 11 100635.0 12 100164.5 13 135707.5 14 230301.5 15 363803.0 16 467590.0 17 516917.5 18 514100.5 19 470098.0 20 405844.0 21 346443.5 22 315991.0 23 331550.5 24 391258.5 25 491446.5 26 623031.5 27 761994.5 28 897628.0 29 1052706.5 30 1209141.5 31 1363333.0 32 1540894.0 33 1714035.5 34 1879326.5 35 2031785.5 36 2204247.0 37 2375333.5 38 2506976.0 39 2618136.5 40 2731190.0 41 2838284.5 42 2938278.5 43 3059114.0 44 3203845.0 45 3350803.0 46 3405817.0 47 3438217.5 48 3457759.0 49 3408647.0 50 3359596.5 51 3293101.5 52 3189857.0 53 3052566.0 54 2901205.5 55 2733030.5 56 2539119.5 57 2320410.0 58 2083020.5 59 1819313.5 60 1516651.0 61 1229056.5 62 979891.5 63 755897.5 64 562086.0 65 411353.0 66 300157.0 67 224873.0 68 170142.5 69 123439.0 70 88289.0 71 62605.5 72 42883.5 73 28349.5 74 18599.0 75 12178.5 76 7856.5 77 4956.5 78 3218.5 79 2181.0 80 1551.0 81 1090.0 82 810.0 83 589.0 84 426.0 85 316.0 86 235.0 87 169.0 88 104.5 89 68.0 90 55.0 91 39.5 92 26.5 93 14.5 94 8.0 95 11.0 96 15.5 97 20.0 98 28.0 99 54.0 100 97.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 1.23087392701181E-6 3 0.0 4 0.0 5 0.05951152349709401 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.003883407239722261 12-13 7.336008604990389E-4 14-15 0.002677766228214193 16-17 0.009801449080795045 18-19 0.0 20-21 7.878043649851832E-5 22-23 9.972358530444436E-5 24-25 1.354607835243827E-5 26-27 2.2174145116795596E-4 28-29 0.03303555722191001 30-31 0.04737121537490717 32-33 0.03703838686269464 34-35 0.006662334061474389 36-37 0.010074122207674379 38-39 8.039873467783126E-4 40-41 1.0701516579271053E-5 42-43 3.801830449564676E-6 44-45 6.099989209087152E-4 46-47 4.3917631778659055E-4 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.004899347020182807 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 3.5913369425503455E-6 74-75 7.245201356426312E-7 76-77 1.8272717709783515E-5 78-79 0.01010750164325296 80-81 0.0 82-83 0.0 84-85 0.0 86-87 8.530061920872195E-5 88-89 1.0254243957739184E-4 90-91 0.0 92-93 1.0360962215228555E-5 94-95 0.0 96-97 0.003248886190155494 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 2708.0 20-21 11164.0 22-23 19988.0 24-25 24914.0 26-27 42742.0 28-29 84951.0 30-31 160667.0 32-33 212492.0 34-35 278506.0 36-37 378544.0 38-39 473820.0 40-41 506626.0 42-43 590483.0 44-45 736641.0 46-47 719583.0 48-49 640132.0 50-51 544958.0 52-53 484831.0 54-55 512704.0 56-57 550099.0 58-59 609045.0 60-61 618472.0 62-63 588211.0 64-65 624247.0 66-67 666750.0 68-69 702888.0 70-71 691912.0 72-73 606532.0 74-75 596502.0 76-77 628879.0 78-79 675492.0 80-81 703283.0 82-83 672794.0 84-85 651736.0 86-87 681161.0 88-89 767080.0 90-91 829130.0 92-93 872511.0 94-95 1036469.0 96-97 2783607.0 98-99 5128851.0 100-101 5.3130984E7 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 72.81144545159154 #Duplication Level Percentage of deduplicated Percentage of total 1 83.82055846037014 61.030960200591785 2 10.127007419942663 14.74724096690036 3 2.7675889122310826 6.045364473460291 4 1.2114835511561939 3.5283947400203846 5 0.633124551834947 2.304935688499679 6 0.38065821758491647 1.662976502723052 7 0.258371834567383 1.3168698717181448 8 0.17274719609155584 1.0062378436108566 9 0.12222771159167549 0.8009618719707129 >10 0.48692313130971226 5.772413730357 >50 0.01308881564520403 0.6511726234434366 >100 0.005752986123081435 0.8044165214162199 >500 3.7102409903725953E-4 0.18286814547652558 >1k 8.933548336418507E-5 0.09649899667544554 >5k 6.851968955903299E-6 0.04868782313595148 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.2308739270118103E-6 2 0.0 3.3233596029318875E-5 0.0 0.0 2.4617478540236206E-6 3 2.4617478540236206E-6 3.446446995633069E-5 0.0 0.0 2.4617478540236206E-6 4 2.4617478540236206E-6 7.754505740174405E-5 0.0 1.2308739270118103E-6 2.4617478540236206E-6 5 6.154369635059051E-6 8.862292274485033E-5 0.0 1.2308739270118103E-6 2.4617478540236206E-6 6 2.7079226394259824E-5 8.862292274485033E-5 0.0 1.2308739270118103E-6 3.6926217810354307E-6 7 2.7079226394259824E-5 8.985379667186214E-5 0.0 1.2308739270118103E-6 3.6926217810354307E-6 8 2.8310100321271633E-5 1.0093166201496844E-4 0.0 1.2308739270118103E-6 6.154369635059051E-6 9 2.8310100321271633E-5 1.673988540736062E-4 0.0 2.4617478540236206E-6 9.846991416094482E-6 10-11 3.015641121178935E-5 1.698606019276298E-4 0.0 2.4617478540236206E-6 9.846991416094482E-6 12-13 3.3233596029318875E-5 1.7909215638021837E-4 0.0 4.923495708047241E-6 1.1693302306612197E-5 14-15 4.246515048190745E-5 2.4740565932937383E-4 0.0 4.923495708047241E-6 2.707922639425982E-5 16-17 6.09282593870846E-5 2.5786808770897427E-4 0.0 6.769806598564957E-6 3.815709173736612E-5 18-19 6.831350294915546E-5 2.7756207054116316E-4 0.0 1.4155050160635817E-5 4.861952011696651E-5 20-21 7.077525080317909E-5 3.095647926434703E-4 0.0 2.2771167649718492E-5 5.846651153306098E-5 22-23 7.692962043823813E-5 3.520299431253777E-4 0.0 3.938796566437792E-5 7.077525080317909E-5 24-25 8.185311614628538E-5 3.9326421968027337E-4 0.0 7.446787258421451E-5 7.754505740174405E-5 26-27 8.36994270368031E-5 4.228051939285568E-4 0.0 1.5139749302245264E-4 7.754505740174405E-5 28-29 8.49303009638149E-5 4.2772868963660406E-4 0.0 5.680483173159505E-4 8.000680525576767E-5 30-31 8.739204881783852E-5 4.837334533156414E-4 0.0 0.0018173853532329378 8.36994270368031E-5 32-33 9.046923363536805E-5 4.948113186587478E-4 0.0 0.004202819023781826 8.862292274485033E-5 34-35 9.78544771974389E-5 5.569704519728441E-4 0.0 0.007548334357399926 1.0462428379600386E-4 36-37 1.0154709897847435E-4 6.246685179584937E-4 0.0 0.013631313304692291 1.0708603165002749E-4 38-39 1.0339340986899206E-4 6.671336684404012E-4 0.0 0.03399673786406619 1.1016321646755702E-4 40-41 1.0954777950405111E-4 7.477559106596747E-4 0.0 0.05717224759880807 1.1385583824859245E-4 42-43 1.1077865343106292E-4 7.779123218714641E-4 0.0 0.06959053464843021 1.1693302306612197E-4 44-45 1.1631758610261607E-4 8.474566987476313E-4 0.0 0.08472536045496744 1.193947709201456E-4 46-47 1.218565187741692E-4 8.936144710105741E-4 0.0 0.10027929883365218 1.2985719929974596E-4 48-49 1.2247195573767512E-4 8.991534036821274E-4 0.0 0.11513963975446576 1.4278137553336997E-4 50-51 1.3354982108078141E-4 0.001017932737638767 0.0 0.12994459134856381 1.446276864238877E-4 52-53 1.4278137553337E-4 0.001030241476908885 0.0 0.17365415537068019 1.6062904747504123E-4 54-55 1.446276864238877E-4 0.0010560898293761332 0.0 0.22187979583100292 1.7663040852619475E-4 56-57 1.452431233873936E-4 0.001077014686135334 0.0 0.2683926752218887 1.803230303072302E-4 58-59 1.4647399731440542E-4 0.0010880925514784403 0.0 0.310057142214275 1.8770827386930107E-4 60-61 1.5447467783998218E-4 0.001102247601639076 0.0 0.3282556132251446 1.957089543948778E-4 62-63 1.673988540736062E-4 0.001115787214836206 0.0 0.350386726432817 2.0063245010292505E-4 64-65 1.673988540736062E-4 0.0012099490702526094 0.0 0.35840279288248134 2.0186332402993688E-4 66-67 1.710914758546416E-4 0.0012290276161212926 0.0 0.3637897126240486 2.1478750026356086E-4 68-69 1.7539953459918295E-4 0.001258568590369576 0.0 0.3692184820791341 2.2094186989861993E-4 70-71 1.81553904234242E-4 0.0012856478167638358 0.0 0.3738188733813408 2.2832711346069078E-4 72-73 2.0247876099344276E-4 0.0013071881104865426 0.0 0.3774154869960693 2.5294459200092697E-4 74-75 2.037096349204546E-4 0.0013533458827494852 0.0 0.3802089553734226 2.535600289644329E-4 76-77 2.0678681973798413E-4 0.0014210439487351348 0.0 0.38290518471054197 2.554063398549506E-4 78-79 2.0924856759200772E-4 0.0014450459903118651 0.0 0.38476934327300133 2.566372137819624E-4 80-81 2.1047944151901955E-4 0.0014512003599469242 0.0 0.3854204755803906 2.683305160885746E-4 82-83 2.1232575240953726E-4 0.001457970166545489 0.0 0.3858937466053266 2.806392553586927E-4 84-85 2.1355662633654909E-4 0.0014690480318885956 0.0 0.38603468166996946 2.8310100321271635E-4 86-87 2.1417206330005497E-4 0.001491819199538314 0.0 0.3860691461399258 2.8433187713972817E-4 88 2.2278818078913764E-4 0.001589058239772247 0.0 0.38607099245081633 2.8679362499375177E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 111990 0.0 54.02185 1 GTATCAA 215390 0.0 39.308334 1 TCAACGC 270630 0.0 30.6328 4 ATCAACG 274315 0.0 30.21818 3 CAACGCA 276310 0.0 30.006983 5 TATCAAC 281230 0.0 29.66204 2 AACGCAG 284190 0.0 29.213531 6 ACGCAGA 328225 0.0 25.27211 7 CGCAGAG 333345 0.0 24.864727 8 GCAGAGT 388120 0.0 21.265507 9 GTACATG 262215 0.0 20.808918 1 TACATGG 262750 0.0 20.293324 2 AGAGTAC 344845 0.0 19.82862 10-11 GAGTACT 225925 0.0 19.655071 12-13 ACATGGG 266085 0.0 19.562048 3 CAGAGTA 374780 0.0 18.793036 10-11 CTTATAC 79595 0.0 17.784914 1 AGTACTT 247865 0.0 17.741232 12-13 CATGGGG 193685 0.0 17.664036 4 GTACTTT 256995 0.0 17.27562 14-15 >>END_MODULE