##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138897_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 30710335 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.606480066075477 31.0 31.0 34.0 28.0 34.0 2 31.65063878332815 33.0 31.0 34.0 28.0 34.0 3 31.745792190153576 33.0 31.0 34.0 28.0 34.0 4 35.26599814036545 37.0 35.0 37.0 32.0 37.0 5 35.08820252204999 37.0 35.0 37.0 32.0 37.0 6 35.1335812520443 37.0 35.0 37.0 32.0 37.0 7 35.0127144493865 37.0 35.0 37.0 32.0 37.0 8 35.03512638334945 37.0 35.0 37.0 32.0 37.0 9 36.56100833807251 39.0 37.0 39.0 32.0 39.0 10-11 36.507869305235516 39.0 37.0 39.0 32.0 39.0 12-13 36.47620377635086 39.0 37.0 39.0 32.0 39.0 14-15 37.676254817799936 40.0 37.0 41.0 32.0 41.0 16-17 37.69505558959223 40.0 37.0 41.0 32.0 41.0 18-19 37.747440706849986 40.0 37.0 41.0 32.0 41.0 20-21 37.771606451398284 40.0 37.0 41.0 32.0 41.0 22-23 37.73567347492537 40.0 37.0 41.0 32.0 41.0 24-25 37.728250884974315 40.0 37.0 41.0 31.5 41.0 26-27 37.66161331260285 40.0 37.0 41.0 31.0 41.0 28-29 37.60811055251527 40.0 37.0 41.0 31.0 41.0 30-31 37.51787273874229 40.0 37.0 41.0 31.0 41.0 32-33 37.44414767438859 40.0 36.0 41.0 31.0 41.0 34-35 37.35640591484806 40.0 36.0 41.0 30.5 41.0 36-37 37.32257965714467 40.0 36.0 41.0 30.0 41.0 38-39 37.26755221636081 40.0 36.0 41.0 30.0 41.0 40-41 37.247636104033134 40.0 36.0 41.0 30.0 41.0 42-43 37.209200620522275 40.0 36.0 41.0 30.0 41.0 44-45 37.13473819786779 40.0 36.0 41.0 30.0 41.0 46-47 37.05829836113327 40.0 36.0 41.0 30.0 41.0 48-49 36.998467119172155 39.0 35.0 41.0 30.0 41.0 50-51 36.922312867580686 39.0 35.0 41.0 30.0 41.0 52-53 37.1329187799729 39.0 36.0 41.0 30.0 41.0 54-55 37.119702266057374 39.0 35.0 41.0 30.0 41.0 56-57 37.03219531381923 39.0 35.0 41.0 30.0 41.0 58-59 36.89499243262644 39.0 35.0 41.0 30.0 41.0 60-61 36.76476603364162 39.0 35.0 41.0 30.0 41.0 62-63 36.5982347951287 38.5 35.0 41.0 30.0 41.0 64-65 36.39246811439389 38.0 35.0 40.0 30.0 41.0 66-67 36.16233766411984 37.5 34.5 40.0 29.5 41.0 68-69 35.902516564389195 37.0 34.0 40.0 29.0 41.0 70-71 35.64629913881119 36.5 34.0 39.0 29.0 41.0 72-73 35.365438578204994 36.0 34.0 39.0 29.0 41.0 74-75 35.09451101349818 36.0 34.0 39.0 29.0 40.5 76-77 34.7967026985808 35.0 34.0 37.5 29.0 40.0 78-79 34.52223872256993 35.0 34.0 37.0 29.0 39.0 80-81 34.2631938710045 35.0 33.5 37.0 29.0 39.0 82-83 34.00652881018618 35.0 33.0 36.0 29.0 38.5 84-85 33.798320886286575 35.0 33.0 36.0 29.0 37.0 86-87 33.579909853981775 35.0 33.0 35.5 29.0 37.0 88-89 33.443551087869494 35.0 33.0 35.0 29.0 36.5 90-91 33.348148291817964 35.0 33.0 35.0 29.0 36.0 92-93 33.281811720259284 35.0 33.0 35.0 29.0 36.0 94-95 33.34064970447529 35.0 33.0 35.0 29.0 36.0 96-97 33.52933182412234 35.0 33.0 35.0 30.0 36.0 98-99 33.62792333022224 35.0 34.0 35.0 30.0 35.0 100 32.82984283803759 34.0 32.0 35.0 29.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 8.0 14 11.0 15 35.0 16 76.0 17 381.0 18 3345.0 19 16420.0 20 50322.0 21 110748.0 22 183736.0 23 252851.0 24 315550.0 25 373720.0 26 428331.0 27 479232.0 28 539459.0 29 612033.0 30 701501.0 31 820892.0 32 984695.0 33 1214392.0 34 1562502.0 35 2091188.0 36 3097137.0 37 5341902.0 38 7446726.0 39 3922863.0 40 160277.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.742679459536994 21.162823525044583 14.526139164551607 24.568357850866818 2 14.365776055466938 22.507801414374665 40.16325188867649 22.963170641481902 3 17.098559817077867 27.645335031350193 31.336701471996314 23.91940367957562 4 12.365163529827525 19.64353303838104 39.387623773884535 28.6036796579069 5 12.57778202111704 38.70626405802934 36.03638713365245 12.679566787201171 6 28.138583017881295 39.77111217674701 19.428130829550653 12.662173975821037 7 24.926133450268487 33.502605347959694 24.488323493903597 17.082937707868222 8 24.060767888367394 36.61563286191182 21.943928211136072 17.379671038584714 9 25.633257040253326 16.359513998025598 21.375775596293607 36.63145336542746 10-11 23.47107695836619 27.01591802333908 29.857114749831954 19.65589026846278 12-13 24.651142503599523 24.778865045328903 29.556677675669864 21.013314775401714 14-15 21.950965962729043 25.88395813062257 27.110452982735882 25.0546229239125 16-17 21.440971682340994 28.916136042222583 27.673905488277335 21.968986787159096 18-19 21.5333466719511 28.196770998395536 29.21641492698458 21.05346740266878 20-21 22.433480368199014 27.362952324175115 28.967809897946 21.23575740967987 22-23 22.124459319612715 27.311457818786256 28.842653643445388 21.721429218155645 24-25 21.853807293660008 27.49401946798951 28.89063397641306 21.761539261937422 26-27 21.82960582798865 27.635488082403352 28.762142242776417 21.772763846831577 28-29 21.79859604782762 27.573280251965038 28.8551995555948 21.772924144612546 30-31 22.065967091809597 27.43982887898596 28.767200426587653 21.72700360261679 32-33 21.889105124678437 27.63093594822943 28.671672454756653 21.808286472335475 34-35 21.98098726997884 27.638579827107396 28.663101971888388 21.717330931025376 36-37 22.051122387429213 27.546997632603688 28.59545463557801 21.80642534438909 38-39 21.905053540221363 27.653563079223463 28.6422680574205 21.799115323134664 40-41 22.088313359061992 27.55832663614612 28.509736282137098 21.843623722654794 42-43 22.021331581862707 27.634587858420208 28.355389632135736 21.98869092758135 44-45 22.071619300784047 27.745138192972707 28.1797488477366 22.003493658506645 46-47 22.19272459678842 27.741364244197026 27.882837799180393 22.183073359834157 48-49 22.140218453532974 27.825361630986407 27.889365305217478 22.14505461026314 50-51 22.12142690381493 27.93484685273891 27.771363069710752 22.172363173735405 52-53 22.254681645700742 27.85481263543025 27.729752684785637 22.160753034083374 54-55 22.234660157874423 27.79918039454956 27.793431864704644 22.172727582871378 56-57 22.231821321282737 27.890003407137286 27.745310184391087 22.13286508718889 58-59 22.188287763768496 27.911643162535015 27.760148169322456 22.13992090437403 60-61 22.279020565970704 27.899889146777852 27.720112091765177 22.10097819548627 62-63 22.205483728923696 27.99095438952466 27.6894918201098 22.114070061441847 64-65 22.173835212617725 27.9033887782065 27.70304832278036 22.219727686395412 66-67 22.27275596589858 27.92225611594778 27.606497829803317 22.198490088350326 68-69 22.22839256856481 27.899445694487074 27.654746883975616 22.2174148529725 70-71 22.248565931275223 27.690480446477554 27.730452753856007 22.330500868391216 72-73 22.254734940180896 27.75647077031761 27.658949724396546 22.32984456510495 74-75 22.10815418812849 27.863224719485313 27.67586609997683 22.352754992409363 76-77 22.22777691613874 27.811572841391907 27.644677526823475 22.31597271564587 78-79 22.211988918543888 27.87900305900456 27.600070989968767 22.30893703248279 80-81 22.236596314951143 27.84149948022113 27.571643303362354 22.350260901465372 82-83 22.22351920053117 27.824071685455788 27.662274801205932 22.290134312807112 84-85 22.275332681176714 27.83145612466804 27.628799091664806 22.264412102490432 86-87 22.182103484327385 27.833152894295488 27.678040803245953 22.306702818131175 88-89 22.2323065173429 27.8330744559786 27.653154899279542 22.28146412739896 90-91 22.219348978683136 27.84313267201351 27.693273682311002 22.24424466699235 92-93 22.245840989363415 27.810928384535906 27.664701251825424 22.27852937427525 94-95 22.078874595585056 27.886810249439286 27.72775078914226 22.3065643658334 96-97 22.137207569943172 28.027434288693758 27.797801595741895 22.037556545621175 98-99 23.21908680635703 29.969785192065668 27.972445375935774 18.83868262564153 100 22.280731239967942 31.00719129387927 21.6476345654497 25.06444290070309 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 6443.0 1 6526.0 2 8548.5 3 10523.5 4 12854.0 5 21677.0 6 29683.0 7 34526.0 8 36843.0 9 34380.0 10 29252.0 11 23752.0 12 24809.5 13 34427.5 14 60030.0 15 98511.0 16 131257.5 17 150350.0 18 156477.5 19 151158.0 20 138423.0 21 125926.0 22 121168.5 23 131038.5 24 157336.0 25 200015.0 26 257506.0 27 322548.0 28 391507.0 29 467384.5 30 543014.0 31 616676.0 32 693720.5 33 767299.5 34 842039.5 35 916076.5 36 989829.0 37 1054302.5 38 1099482.0 39 1140268.5 40 1185661.5 41 1222198.5 42 1249235.5 43 1273352.5 44 1291199.0 45 1309249.5 46 1315924.0 47 1311663.0 48 1299408.0 49 1271330.5 50 1235672.0 51 1188415.0 52 1126333.5 53 1054171.0 54 978224.0 55 901605.5 56 824563.5 57 746480.5 58 665774.0 59 580581.0 60 487152.5 61 396438.0 62 316717.0 63 248076.0 64 189659.5 65 144095.0 66 109884.0 67 84921.0 68 66216.5 69 50220.0 70 37699.5 71 28454.0 72 21581.0 73 16179.5 74 11834.5 75 8664.0 76 6255.5 77 4392.5 78 3204.5 79 2391.5 80 1782.5 81 1366.5 82 1088.0 83 754.5 84 497.5 85 344.5 86 259.0 87 203.5 88 142.5 89 101.5 90 81.0 91 69.5 92 57.0 93 33.0 94 12.0 95 6.5 96 6.0 97 5.5 98 4.5 99 5.0 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.01316820542660964 3 0.0 4 0.1282499848992204 5 0.03660656909148012 6 0.0048615555642750235 7 0.005135079119130416 8 5.470471097107863E-4 9 8.270831301579745E-4 10-11 0.004874580495458613 12-13 5.2099724734360595E-5 14-15 4.721537554051429E-5 16-17 4.3633519465027E-4 18-19 2.116551317333399E-5 20-21 8.587751444921772E-4 22-23 0.02990346462040326 24-25 0.0010666427442493052 26-27 0.004519216606967919 28-29 5.815501653773044E-4 30-31 0.002677593260975493 32-33 0.0034758617210330026 34-35 0.019888586576572043 36-37 0.00449948482391958 38-39 0.0016314859846262306 40-41 0.0010173264117980855 42-43 9.362510702245425E-4 44-45 0.030167104123744334 46-47 0.003935968428101914 48-49 0.005747589245102685 50-51 0.019052707554090286 52-53 0.004318774590616305 54-55 9.737174711310916E-4 56-57 0.0012339508597615026 58-59 0.004150178614884175 60-61 0.0028934714700997025 62-63 8.356708549407315E-4 64-65 1.2867891170288378E-4 66-67 1.8528023394519907E-6 68-69 3.1572976132997183E-4 70-71 0.012924116140653131 72-73 0.0041000384285938395 74-75 0.0028116227154966504 76-77 3.8657781716748015E-6 78-79 0.0 80-81 7.285050212602378E-5 82-83 9.941069340946867E-6 84-85 2.6096964314790175E-5 86-87 0.005418655280719792 88-89 0.0 90-91 8.495400362318465E-5 92-93 1.3216310664360652E-4 94-95 2.763914384817929E-4 96-97 0.0 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 18563.0 20-21 35679.0 22-23 36620.0 24-25 39323.0 26-27 44948.0 28-29 57836.0 30-31 86761.0 32-33 99070.0 34-35 119567.0 36-37 153361.0 38-39 187324.0 40-41 193082.0 42-43 221211.0 44-45 261130.0 46-47 251548.0 48-49 224616.0 50-51 198501.0 52-53 190533.0 54-55 198890.0 56-57 208586.0 58-59 214682.0 60-61 214431.0 62-63 203052.0 64-65 209935.0 66-67 221186.0 68-69 229303.0 70-71 231143.0 72-73 217845.0 74-75 217577.0 76-77 227300.0 78-79 240527.0 80-81 247262.0 82-83 242174.0 84-85 240658.0 86-87 250659.0 88-89 271919.0 90-91 294195.0 92-93 308706.0 94-95 360697.0 96-97 1017474.0 98-99 2010382.0 100-101 2.0212079E7 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 81.93106273118312 #Duplication Level Percentage of deduplicated Percentage of total 1 88.05594924062198 72.14517501087276 2 7.947975242924931 13.02372116427946 3 2.1173398010119238 5.204277001798161 4 0.8186493088143898 2.6829123150124583 5 0.40125905765463304 1.6437790512078583 6 0.2181515389355047 1.0724032452857384 7 0.1327277683778035 0.7612168981992232 8 0.08311047273456632 0.5447463484187229 9 0.05028609914844686 0.37079941894541035 >10 0.16974025967885373 2.138157123955322 >50 0.003621601978309543 0.19967142404559826 >100 0.0011180700611061315 0.14741699527754637 >500 5.5867714628242804E-5 0.030031920677519926 >1k 1.5670342928232514E-5 0.03569208202419207 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 3.2562327958975376E-6 0.0 2 0.0 3.581856075487291E-5 0.0 3.2562327958975376E-6 0.0 3 0.0 3.581856075487291E-5 0.0 3.2562327958975376E-6 0.0 4 0.0 1.1396814785641382E-4 0.0 3.2562327958975376E-6 0.0 5 0.0 1.1722438065231135E-4 0.0 3.2562327958975376E-6 0.0 6 3.907479355077045E-5 1.2373684624410641E-4 0.0 3.2562327958975376E-6 3.2562327958975376E-6 7 3.907479355077045E-5 1.2699307904000395E-4 0.0 3.2562327958975376E-6 3.2562327958975376E-6 8 4.558725914256552E-5 1.3676177742769657E-4 0.0 6.512465591795075E-6 3.2562327958975376E-6 9 4.558725914256552E-5 2.2468006291693007E-4 0.0 5.5355957530258135E-5 6.512465591795075E-6 10-11 5.047160833641183E-5 2.2468006291693007E-4 0.0 6.349653952000197E-5 6.512465591795075E-6 12-13 5.535595753025814E-5 2.2468006291693007E-4 0.0 9.605886747897736E-5 6.512465591795075E-6 14-15 6.512465591795074E-5 2.800360204471882E-4 0.0 1.0419944946872119E-4 1.628116397948769E-5 16-17 8.791828548923351E-5 2.898047188348808E-4 0.0 1.253649626420552E-4 1.628116397948769E-5 18-19 9.443075108102859E-5 3.3864821077334386E-4 0.0 1.416461266215429E-4 1.628116397948769E-5 20-21 9.605886747897736E-5 3.907479355077045E-4 0.0 1.725803381825695E-4 1.628116397948769E-5 22-23 1.1234003145846504E-4 4.884349193846306E-4 0.0 1.9374585135590347E-4 2.442174596923153E-5 24-25 1.1885249705026012E-4 5.617001572923253E-4 0.0 2.1328324813128872E-4 3.581856075487292E-5 26-27 1.2048061344820888E-4 5.828656704656592E-4 0.0 2.523580416820591E-4 3.907479355077045E-5 28-29 1.2048061344820888E-4 5.893781360574543E-4 0.0 4.233102634666799E-4 3.907479355077045E-5 30-31 1.2373684624410641E-4 6.561309083733537E-4 0.0 9.443075108102859E-4 4.0702909948719216E-5 32-33 1.2699307904000395E-4 6.626433739651489E-4 0.0 0.00219470090443494 4.884349193846306E-5 34-35 1.3024931183590148E-4 7.424210774646385E-4 0.0 0.003803279905608324 5.5355957530258135E-5 36-37 1.416461266215429E-4 8.270831301579745E-4 0.0 0.006308951042051479 5.5355957530258135E-5 38-39 1.4653047581538917E-4 8.563892253210523E-4 0.0 0.0105127475815552 5.8612190326155675E-5 40-41 1.4653047581538917E-4 9.231419976369519E-4 0.0 0.01515287931570919 5.8612190326155675E-5 42-43 1.514148250092355E-4 9.443075108102858E-4 0.0 0.019760448721904206 6.024030672410444E-5 44-45 1.562991742030818E-4 0.0010371101454933656 0.0 0.024457564529986403 6.186842312205321E-5 46-47 1.6281163979487686E-4 0.001113631616196958 0.0 0.029665908887024514 6.349653952000199E-5 48-49 1.6932410538667193E-4 0.0011250284309825991 0.0 0.034903559339225704 6.838088871384829E-5 50-51 1.9374585135590347E-4 0.00129598065276722 0.0 0.040375658552731515 6.838088871384829E-5 52-53 2.0514266614154485E-4 0.0013057493511549126 0.0 0.04566703684606502 8.466205269333597E-5 54-55 2.1165513173333994E-4 0.00130900558395081 0.0 0.05073210696008364 1.0419944946872119E-4 56-57 2.2305194651898132E-4 0.0013448241447056829 0.0 0.05543085088456378 1.1396814785641382E-4 58-59 2.3119252850872517E-4 0.0013692458906749145 0.0 0.06007749508430957 1.2048061344820888E-4 60-61 2.523580416820591E-4 0.0013969238694400436 0.0 0.06485438859589125 1.2373684624410641E-4 62-63 2.865484860389833E-4 0.0014278580810010702 0.0 0.06956452933515703 1.302493118359015E-4 64-65 2.8817660243693206E-4 0.0015792729060103057 0.0 0.07365110149400844 1.3350554463179904E-4 66-67 3.077139992123173E-4 0.0015922978371938957 0.0 0.0779363038534096 1.3513366102974782E-4 68-69 3.125983484061636E-4 0.0016590506095097953 0.0 0.08221824998001487 1.3838989382564533E-4 70-71 3.1911081399795866E-4 0.0016981254030605658 0.0 0.08601013307083755 1.4327424301949164E-4 72-73 3.3864821077334386E-4 0.001709522217846207 0.0 0.08896190810031868 1.6932410538667196E-4 74-75 3.435325599671902E-4 0.001751853244192875 0.0 0.09106055013727463 1.725803381825695E-4 76-77 3.467887927630877E-4 0.001821862249304672 0.0 0.09328618525327059 1.7420845458051827E-4 78-79 3.598137239466779E-4 0.0018462839952739037 0.0 0.09464891867835372 1.7583657097846702E-4 80-81 3.630699567425754E-4 0.001849540228069801 0.0 0.09516340346010553 1.8072092017231334E-4 82-83 3.679543059364217E-4 0.001857680810059545 0.0 0.09555415139561324 1.9211773495795472E-4 84-85 3.72838655130268E-4 0.0018690776248451865 0.0 0.09568602882384708 1.9211773495795472E-4 86-87 3.760948879261656E-4 0.0018967556036103156 0.0 0.09572347550099991 1.9537396775385225E-4 88 3.8749170271180694E-4 0.0019993269366810878 0.0 0.0957299879665917 1.9863020054974978E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 37240 0.0 49.07157 1 GTATCAA 65970 0.0 35.63017 1 TCAACGC 79695 0.0 28.942677 4 ATCAACG 80185 0.0 28.771084 3 CAACGCA 81870 0.0 28.11642 5 TATCAAC 84940 0.0 27.30102 2 AACGCAG 84840 0.0 27.224218 6 ACGCAGA 97260 0.0 23.672873 7 CGCAGAG 99085 0.0 23.253971 8 GTACATG 87975 0.0 19.913668 1 TACATGG 87250 0.0 19.565668 2 GCAGAGT 118550 0.0 19.166355 9 ACATGGG 89210 0.0 18.576277 3 GAGTACT 65700 0.0 18.57407 12-13 AGAGTAC 105160 0.0 18.26492 10-11 CAGAGTA 114850 0.0 17.59736 10-11 CATGGGG 60545 0.0 16.631348 4 GTACTTT 74960 0.0 16.225277 14-15 AGTACTT 72225 0.0 16.064507 12-13 GTGGTAT 17865 0.0 13.876012 1 >>END_MODULE