##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138891_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7044145 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.90140038287117 33.0 33.0 33.0 33.0 33.0 2 32.95769522064069 33.0 33.0 33.0 33.0 33.0 3 33.62937475023583 33.0 33.0 33.0 33.0 37.0 4 36.78290168643604 37.0 37.0 37.0 37.0 37.0 5 36.796997364477875 37.0 37.0 37.0 37.0 37.0 6 36.80225960709213 37.0 37.0 37.0 37.0 37.0 7 36.793129045469676 37.0 37.0 37.0 37.0 37.0 8 36.782236027225444 37.0 37.0 37.0 37.0 37.0 9 36.78711184962831 37.0 37.0 37.0 37.0 37.0 10-11 36.781997957168684 37.0 37.0 37.0 37.0 37.0 12-13 37.038829623751354 37.0 37.0 37.0 37.0 38.5 14-15 39.09243797508427 40.0 40.0 40.0 37.0 40.0 16-17 39.051545574374174 40.0 40.0 40.0 37.0 40.0 18-19 39.043903695906316 40.0 40.0 40.0 37.0 40.0 20-21 39.10208258285597 40.0 40.0 40.0 37.0 40.0 22-23 39.1308224894155 40.0 40.0 40.0 37.0 40.0 24-25 39.11415454506327 40.0 40.0 40.0 37.0 40.0 26-27 38.84988750901671 40.0 40.0 40.0 37.0 40.0 28-29 38.87929025536898 40.0 40.0 40.0 37.0 40.0 30-31 38.88472863795849 40.0 40.0 40.0 37.0 40.0 32-33 38.86698743938219 40.0 40.0 40.0 37.0 40.0 34-35 38.84506062430479 40.0 38.5 40.0 37.0 40.0 36-37 38.81175033296511 40.0 37.0 40.0 37.0 40.0 38-39 38.77422427568088 40.0 37.0 40.0 37.0 40.0 40-41 38.726117596663485 40.0 37.0 40.0 37.0 40.0 42-43 38.66858511482177 40.0 37.0 40.0 37.0 40.0 44-45 38.59992218210452 40.0 37.0 40.0 37.0 40.0 46-47 38.526603420180024 40.0 37.0 40.0 37.0 40.0 48-49 38.476823654288566 40.0 37.0 40.0 37.0 40.0 50-51 38.434277152961826 40.0 37.0 40.0 37.0 40.0 52-53 38.37319731634956 40.0 37.0 40.0 37.0 40.0 54-55 38.30205645753763 40.0 37.0 40.0 37.0 40.0 56-57 38.20144690574335 40.0 37.0 40.0 37.0 40.0 58-59 38.074208134895315 40.0 37.0 40.0 37.0 40.0 60-61 37.92209612626975 40.0 37.0 40.0 35.0 40.0 62-63 37.74152419164043 40.0 37.0 40.0 33.0 40.0 64-65 37.52905249108641 37.0 37.0 40.0 33.0 40.0 66-67 37.299078160529206 37.0 37.0 40.0 33.0 40.0 68-69 37.037221895315625 37.0 37.0 40.0 33.0 40.0 70-71 36.783471434939145 37.0 37.0 40.0 33.0 40.0 72-73 36.531742359374576 37.0 37.0 38.5 33.0 40.0 74-75 36.04402836443405 37.0 37.0 37.0 33.0 40.0 76-77 34.22140842949089 37.0 33.0 37.0 27.0 37.0 78-79 31.90197903869231 37.0 33.0 37.0 10.5 37.0 80-81 34.73055943612855 37.0 33.0 37.0 30.0 37.0 82-83 35.61229197838034 37.0 35.0 37.0 33.0 37.0 84-85 35.69580443452763 37.0 37.0 37.0 33.0 37.0 86-87 35.64986167997114 37.0 37.0 37.0 33.0 37.0 88-89 35.57243721517351 37.0 37.0 37.0 33.0 37.0 90-91 35.500560332627686 37.0 35.0 37.0 33.0 37.0 92-93 35.43097742904408 37.0 33.0 37.0 33.0 37.0 94-95 35.38494771412165 37.0 33.0 37.0 33.0 37.0 96-97 35.356754044233256 37.0 33.0 37.0 33.0 37.0 98-99 35.31210094095544 37.0 33.0 37.0 33.0 37.0 100 35.243810326518634 37.0 33.0 37.0 33.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 1.0 14 0.0 15 0.0 16 1.0 17 1.0 18 2.0 19 4.0 20 21.0 21 77.0 22 327.0 23 960.0 24 2383.0 25 5196.0 26 9843.0 27 16612.0 28 25472.0 29 37539.0 30 52927.0 31 72799.0 32 99491.0 33 138958.0 34 203912.0 35 329811.0 36 713058.0 37 2176428.0 38 2985166.0 39 173155.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.97328441504754 0.0 24.81238273921201 29.214332845740454 2 14.9183847388597 23.977614132250213 38.7991800782699 22.304821050620184 3 16.445801537121355 24.757375831509513 33.457475323035126 25.339347308334006 4 12.851834392118889 23.423195213172296 37.781250266234636 25.943720128474183 5 17.074591917388055 36.52602927373086 32.46643627090532 13.932942537975759 6 27.577711702413847 37.560016155260854 20.544012083794414 14.31826005853088 7 25.79356696853443 33.288601141600736 22.598260342207656 18.319571547657173 8 23.93559813655144 32.31795091071392 22.35114727921519 21.39530367351945 9 23.801486738488027 20.503839785217338 23.843578439055193 31.85109503723944 10-11 24.409083630317607 26.20400718667875 28.880996754183336 20.50591242882031 12-13 24.92126793546526 24.433394604085322 28.70592225258314 21.93941520786628 14-15 22.340152330787106 26.75650157066636 27.00466515164937 23.898680946897166 16-17 21.183720664466733 29.042971148379255 27.958410850429683 21.81489733672433 18-19 21.27571648703636 27.98686596887187 29.861373494165754 20.876044049926012 20-21 22.14011390423254 27.29430456122338 29.77236615628015 20.79321537826393 22-23 21.934824229254783 26.99145269777155 29.632351563072383 21.441371509901288 24-25 21.634914995127048 27.26882123939006 29.77574894460755 21.320514820875346 26-27 21.558225904963876 27.459745324947704 29.58157541832969 21.40045335175873 28-29 21.480001912331005 27.452813516992997 29.68432167456452 21.38286289611148 30-31 21.7328243703934 27.316182008736984 29.620104677138652 21.33088894373096 32-33 21.54239983742716 27.61370055786659 29.454532584887477 21.389367019818774 34-35 21.733498193974572 27.53443183184214 29.339870515704693 21.39219945847859 36-37 21.638856540856075 27.57309747155958 29.37843030377288 21.409615683811463 38-39 21.521550529566785 27.793195354853335 29.333790077849446 21.35146403773043 40-41 21.856720737008388 27.53897059834674 29.10248752772778 21.50182113691709 42-43 21.71692585796792 27.6194658054567 29.069111923757383 21.59449641281799 44-45 21.826221636388414 27.95682769267011 28.657356207470247 21.559594463471228 46-47 21.951628540850614 27.784175842268027 28.33095077329928 21.933244843582074 48-49 21.86659875089379 27.977261087301457 28.32500261509412 21.831137546710632 50-51 21.90522623959856 28.190154697811558 28.041295945709372 21.863323116880508 52-53 22.11425112258816 27.96329558167691 27.971793535731255 21.950659760003678 54-55 22.04412114743673 27.908470587999133 28.084986368917598 21.96242189564654 56-57 22.066762498500765 28.220573448376157 27.83753927884534 21.875124774277737 58-59 22.075798672362538 28.017708529693223 27.952218172903017 21.95427462504122 60-61 22.04523749049508 28.075555123004165 28.02418700779146 21.85502037870929 62-63 21.98815698834364 28.233137715292315 27.87015473639105 21.908550559972994 64-65 22.0557442953514 28.018872817971157 27.84121034370033 22.084172542977118 66-67 22.0835581990278 28.126779792365262 27.765872380997504 22.023789627609432 68-69 22.09877107275176 28.156646792644647 27.78853686847249 21.956045266131103 70-71 22.125305345596384 27.747647581742214 27.880954657496016 22.24609241516539 72-73 22.135986376176323 27.877849277276834 27.822148054001584 22.16401629254526 74-75 21.99214083486517 28.053841671491682 27.809477254298372 22.144540239344774 76-77 22.300233290232406 27.8508571335006 27.55957225066137 22.28933732560563 78-79 22.460597369159487 27.910116519259343 27.51650076648952 22.112785345091645 80-81 22.11095457949379 27.99690616466004 27.672782658240575 22.219356597605593 82-83 22.211961443615447 27.820198618232645 27.779995260622464 22.187844677529444 84-85 22.29810842539496 27.817432133175956 27.780992146670414 22.10346729475867 86-87 22.107832479939628 27.884019136296313 27.805810716882846 22.20233766688122 88-89 22.26518354352402 27.74256410570932 27.73410392528921 22.258148425477444 90-91 22.246139142087948 27.749832120742756 27.845919555380718 22.158109181788575 92-93 22.217926325891046 27.81077079525292 27.794191673124363 22.177111205731663 94-95 22.253442538198897 27.719089032712606 27.799182666831634 22.228285762256863 96-97 22.271757479054973 27.977809743617748 27.990997963811488 21.759434813515792 98-99 23.309559626765214 30.04184364079429 27.52244961656017 19.126147115880325 100 22.44723857789136 30.45248126532445 21.868605820699656 25.23167433608454 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1255.0 1 1174.5 2 1801.5 3 2755.0 4 4028.0 5 6810.0 6 9072.0 7 10476.0 8 11452.5 9 11485.5 10 10917.5 11 10241.5 12 11232.0 13 14461.5 14 22312.5 15 34346.0 16 45227.0 17 52150.0 18 53874.5 19 50882.5 20 45822.0 21 40424.0 22 36694.0 23 36872.5 24 41232.0 25 49927.5 26 62597.5 27 76617.5 28 90646.0 29 106403.0 30 122735.0 31 138570.0 32 155086.0 33 171585.5 34 188454.0 35 204029.5 36 220459.0 37 236072.5 38 245900.5 39 253627.0 40 263622.0 41 272515.5 42 277373.0 43 282351.0 44 286396.5 45 289573.0 46 291228.5 47 290839.0 48 289040.5 49 281699.5 50 272111.0 51 261360.5 52 248402.0 53 234167.5 54 218427.5 55 202386.5 56 186024.5 57 168256.0 58 149779.5 59 131004.0 60 110375.5 61 89863.0 62 71165.5 63 55031.0 64 41581.0 65 31184.5 66 23596.0 67 18069.0 68 13866.0 69 10202.0 70 7255.5 71 5134.0 72 3547.0 73 2367.5 74 1590.0 75 1074.0 76 712.0 77 448.5 78 287.5 79 201.0 80 138.0 81 85.0 82 59.0 83 41.0 84 27.0 85 22.5 86 20.5 87 16.5 88 13.0 89 10.0 90 6.5 91 3.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 2.413351797840618E-4 2 8.233788486750344E-4 3 0.004670545538173902 4 0.021081337763490103 5 0.012804960715601398 6 0.0 7 1.4196187046121282E-5 8 1.4196187046121282E-5 9 1.4196187046121282E-5 10-11 1.4196187046121282E-5 12-13 1.4196187046121282E-5 14-15 1.4196187046121282E-5 16-17 0.0 18-19 2.129428056918192E-5 20-21 6.388582098923218E-5 22-23 5.53744212485569E-4 24-25 0.014010043774108388 26-27 0.058754339801117515 28-29 0.08735869251687857 30-31 0.0728939073376237 32-33 0.0328120473854469 34-35 0.003649125819711719 36-37 7.186233246734431E-6 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 7.541727245590766E-6 50-51 7.604921875017825E-6 52-53 2.2988148153710712E-5 54-55 4.941151274349936E-4 56-57 7.160484276004602E-4 58-59 0.0 60-61 0.0 62-63 0.0 64-65 8.041936446828003E-6 66-67 5.6791063163588365E-5 68-69 2.6201674286986936E-4 70-71 0.0013883378463954577 72-73 0.01720195486917467 74-75 0.07140435291435264 76-77 0.9478122849528654 78-79 3.9174283485884107 80-81 9.959341637288052E-4 82-83 0.017623039425931457 84-85 0.050393254616467244 86-87 0.0366230725714063 88-89 0.008495536145890902 90-91 3.6500436682099355E-5 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 164.0 20-21 708.0 22-23 1256.0 24-25 2520.0 26-27 3900.0 28-29 6966.0 30-31 14543.0 32-33 19871.0 34-35 27655.0 36-37 38171.0 38-39 44896.0 40-41 47031.0 42-43 57426.0 44-45 68532.0 46-47 65838.0 48-49 57221.0 50-51 50348.0 52-53 48341.0 54-55 51222.0 56-57 53352.0 58-59 52186.0 60-61 51220.0 62-63 50362.0 64-65 53381.0 66-67 56518.0 68-69 56227.0 70-71 54791.0 72-73 53167.0 74-75 54501.0 76-77 56618.0 78-79 57385.0 80-81 56839.0 82-83 55700.0 84-85 56485.0 86-87 59183.0 88-89 63501.0 90-91 66002.0 92-93 68825.0 94-95 88466.0 96-97 324646.0 98-99 1241685.0 100-101 3706496.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 85.15233839372418 #Duplication Level Percentage of deduplicated Percentage of total 1 89.59161918696935 76.28935874250486 2 7.353259881732586 12.52294547492579 3 1.7865555244933444 4.56388141742504 4 0.592441569715391 2.017911400916564 5 0.2680269351051523 1.1411560138353343 6 0.1446376115452738 0.7389738505657909 7 0.07824582773133978 0.46639706406132647 8 0.046574949151782556 0.3172772664674468 9 0.030972575903270693 0.2373648537816552 >10 0.10448033306466928 1.3696250866753765 >50 0.0024548479091942455 0.13958073649615924 >100 6.251160197305871E-4 0.11483809383441665 >500 7.923055432484862E-5 0.045944769049510614 >1k 2.6410104621486163E-5 0.034745229460720825 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 1.4196187046121282E-5 0.0 2 0.0 1.4196187046121282E-5 0.0 1.4196187046121282E-5 0.0 3 0.0 1.4196187046121282E-5 0.0 2.8392374092242564E-5 0.0 4 0.0 1.4196187046121282E-5 0.0 2.8392374092242564E-5 0.0 5 1.4196187046121282E-5 4.258856113836385E-5 0.0 2.8392374092242564E-5 0.0 6 1.4196187046121282E-5 4.258856113836385E-5 0.0 2.8392374092242564E-5 0.0 7 1.4196187046121282E-5 4.258856113836385E-5 0.0 2.8392374092242564E-5 1.4196187046121282E-5 8 1.4196187046121282E-5 7.09809352306064E-5 0.0 2.8392374092242564E-5 1.4196187046121282E-5 9 1.4196187046121282E-5 1.2776568341509153E-4 0.0 4.258856113836385E-5 1.4196187046121282E-5 10-11 1.4196187046121282E-5 1.2776568341509153E-4 0.0 7.098093523060642E-5 1.4196187046121282E-5 12-13 1.4196187046121282E-5 1.2776568341509153E-4 0.0 9.227521579978834E-5 1.4196187046121282E-5 14-15 1.4196187046121282E-5 2.058447121687586E-4 0.0 1.2776568341509153E-4 1.4196187046121282E-5 16-17 1.4196187046121282E-5 2.271389927379405E-4 0.0 1.419618704612128E-4 2.1294280569181925E-5 18-19 1.4196187046121282E-5 2.5553136683018307E-4 0.0 2.058447121687586E-4 4.258856113836385E-5 20-21 1.4196187046121282E-5 2.5553136683018307E-4 0.0 3.0521802149160754E-4 4.968665466142449E-5 22-23 1.4196187046121282E-5 2.839237409224256E-4 0.0 4.187875178605778E-4 6.388284170754577E-5 24-25 1.4196187046121282E-5 3.0521802149160754E-4 0.0 5.039646401373056E-4 7.09809352306064E-5 26-27 1.4196187046121282E-5 3.265123020607895E-4 0.0 5.678474818448513E-4 7.09809352306064E-5 28-29 1.4196187046121282E-5 3.4780658262997143E-4 0.0 9.298502515209439E-4 7.09809352306064E-5 30-31 1.4196187046121282E-5 4.187875178605778E-4 0.0 0.0016680519779192506 9.937330932284898E-5 32-33 1.4196187046121282E-5 4.329837049066991E-4 0.0 0.0030237878408238333 9.937330932284898E-5 34-35 4.258856113836385E-5 5.252589207064874E-4 0.0 0.005046744494896116 9.937330932284898E-5 36-37 4.258856113836385E-5 6.033379494601545E-4 0.0 0.00785758953002813 9.937330932284898E-5 38-39 4.968665466142449E-5 6.885150717368823E-4 0.0 0.011782835248280665 1.1356949636897026E-4 40-41 7.09809352306064E-5 8.304769421980951E-4 0.0 0.016566950282823536 1.1356949636897026E-4 42-43 7.09809352306064E-5 9.014578774287013E-4 0.0 0.021088435857013164 1.1356949636897026E-4 44-45 7.09809352306064E-5 9.653407191362472E-4 0.0 0.025595725244156674 1.1356949636897026E-4 46-47 7.09809352306064E-5 9.724388126593079E-4 0.0 0.03099737441520582 1.1356949636897026E-4 48-49 7.09809352306064E-5 9.795369061823685E-4 0.0 0.03620737506113233 1.2776568341509153E-4 50-51 7.09809352306064E-5 0.001185381618351127 0.0 0.041431571894104964 1.2776568341509153E-4 52-53 7.09809352306064E-5 0.001206675898920309 0.0 0.04693969246800002 1.4196187046121284E-4 54-55 7.09809352306064E-5 0.001206675898920309 0.0 0.052490401603033435 1.5615805750733412E-4 56-57 7.09809352306064E-5 0.0012208720859664302 0.0 0.057863658399990345 1.5615805750733412E-4 58-59 7.09809352306064E-5 0.0012634606471047943 0.0 0.06338597516093153 1.5615805750733412E-4 60-61 8.51771222767277E-5 0.001306049208243158 0.0 0.06857468152628886 1.5615805750733412E-4 62-63 8.51771222767277E-5 0.0013486377693815218 0.0 0.07369950504993864 1.703542445534554E-4 64-65 8.51771222767277E-5 0.0015331882009810985 0.0 0.07956253029998672 1.7745233807651604E-4 66-67 8.51771222767277E-5 0.001540286294504159 0.0 0.08497127756455894 1.8455043159957668E-4 68-69 9.937330932284898E-5 0.0016041691362117048 0.0 0.08931531080067204 1.8455043159957668E-4 70-71 9.937330932284898E-5 0.0016467576973500687 0.0 0.0933825183893858 1.9164852512263731E-4 72-73 9.937330932284898E-5 0.0016751500714423115 0.0 0.09671152425170124 1.9874661864569795E-4 74-75 9.937330932284898E-5 0.0017035424455345539 0.0 0.10000503964640137 1.9874661864569795E-4 76-77 9.937330932284898E-5 0.001760327193719039 0.0 0.10214866389036568 1.9874661864569795E-4 78-79 9.937330932284898E-5 0.0017887195678112815 0.0 0.10349020356622415 1.9874661864569795E-4 80-81 1.0647140284590962E-4 0.0017887195678112815 0.0 0.10400836439340758 2.058447121687586E-4 82-83 1.1356949636897026E-4 0.0017887195678112815 0.0 0.10439166144365285 2.1294280569181923E-4 84-85 1.1356949636897026E-4 0.0017958176613343422 0.0 0.10464719281048303 2.1294280569181923E-4 86-87 1.1356949636897026E-4 0.001802915754857403 0.0 0.1046897813716214 2.1294280569181923E-4 88 1.1356949636897026E-4 0.0018313081289496455 0.0 0.10469687946514446 2.271389927379405E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 12505 0.0 46.120693 1 GTATCAA 21870 0.0 35.386898 1 ATCAACG 24910 0.0 30.18672 3 TCAACGC 25780 0.0 29.1991 4 CAACGCA 26190 0.0 28.704046 5 AACGCAG 26270 0.0 28.645515 6 ACGCAGA 26630 0.0 28.24242 7 TATCAAC 27405 0.0 27.823622 2 CGCAGAG 30290 0.0 24.801968 8 GCAGAGT 34380 0.0 21.740927 9 GAGTACT 21805 0.0 20.294472 12-13 GTACATG 21385 0.0 20.138157 1 CAGAGTA 33190 0.0 19.602058 10-11 ACATGGG 20755 0.0 19.46771 3 AGAGTAC 31025 0.0 19.310297 10-11 TACATGG 21440 0.0 19.259268 2 GTGGTAT 6415 0.0 19.020851 1 TGGTATC 6045 0.0 18.927738 2 GTACTTT 23745 0.0 18.334936 14-15 AGTACTT 23425 0.0 17.665802 12-13 >>END_MODULE