##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138884_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7233661 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.90292674760401 33.0 33.0 33.0 33.0 33.0 2 32.9610353595503 33.0 33.0 33.0 33.0 33.0 3 33.62678123843514 33.0 33.0 33.0 33.0 37.0 4 36.79039990953405 37.0 37.0 37.0 37.0 37.0 5 36.80238706237409 37.0 37.0 37.0 37.0 37.0 6 36.80688271125783 37.0 37.0 37.0 37.0 37.0 7 36.79831540350038 37.0 37.0 37.0 37.0 37.0 8 36.78936516378083 37.0 37.0 37.0 37.0 37.0 9 36.7931990454073 37.0 37.0 37.0 37.0 37.0 10-11 36.7885052257771 37.0 37.0 37.0 37.0 37.0 12-13 37.045106827649235 37.0 37.0 37.0 37.0 38.5 14-15 39.13445411666375 40.0 40.0 40.0 37.0 40.0 16-17 39.096748935290165 40.0 40.0 40.0 37.0 40.0 18-19 39.0786809058373 40.0 40.0 40.0 37.0 40.0 20-21 39.133868382736466 40.0 40.0 40.0 37.0 40.0 22-23 39.16367886599534 40.0 40.0 40.0 37.0 40.0 24-25 39.149111303738856 40.0 40.0 40.0 37.0 40.0 26-27 38.891446586649394 40.0 40.0 40.0 37.0 40.0 28-29 38.92178320144184 40.0 40.0 40.0 37.0 40.0 30-31 38.92779500725065 40.0 40.0 40.0 37.0 40.0 32-33 38.911855879536375 40.0 40.0 40.0 37.0 40.0 34-35 38.889025544506595 40.0 40.0 40.0 37.0 40.0 36-37 38.8543908411573 40.0 40.0 40.0 37.0 40.0 38-39 38.81476614813643 40.0 40.0 40.0 37.0 40.0 40-41 38.764113183983795 40.0 37.0 40.0 37.0 40.0 42-43 38.705265302993965 40.0 37.0 40.0 37.0 40.0 44-45 38.63660140849288 40.0 37.0 40.0 37.0 40.0 46-47 38.562094396495 40.0 37.0 40.0 37.0 40.0 48-49 38.5067578452563 40.0 37.0 40.0 37.0 40.0 50-51 38.457300360265215 40.0 37.0 40.0 37.0 40.0 52-53 38.3907236180372 40.0 37.0 40.0 37.0 40.0 54-55 38.313747548996595 40.0 37.0 40.0 37.0 40.0 56-57 38.21352320826039 40.0 37.0 40.0 37.0 40.0 58-59 38.0792173050441 40.0 37.0 40.0 37.0 40.0 60-61 37.92255370643176 40.0 37.0 40.0 37.0 40.0 62-63 37.736077703466286 38.5 37.0 40.0 33.0 40.0 64-65 37.51643909980457 37.0 37.0 40.0 33.0 40.0 66-67 37.28655141417613 37.0 37.0 40.0 33.0 40.0 68-69 37.030354729768646 37.0 37.0 40.0 33.0 40.0 70-71 36.77945667445239 37.0 37.0 40.0 33.0 40.0 72-73 36.52728503228575 37.0 37.0 37.0 33.0 40.0 74-75 36.042536517325026 37.0 37.0 37.0 33.0 40.0 76-77 34.21062662342739 37.0 33.0 37.0 30.0 37.0 78-79 31.877888198432824 37.0 33.0 37.0 10.5 37.0 80-81 34.72261409655802 37.0 33.0 37.0 30.0 37.0 82-83 35.62204197499756 37.0 35.0 37.0 33.0 37.0 84-85 35.71525214733767 37.0 37.0 37.0 33.0 37.0 86-87 35.673836877152496 37.0 37.0 37.0 33.0 37.0 88-89 35.597185824570516 37.0 37.0 37.0 33.0 37.0 90-91 35.525932101885054 37.0 35.0 37.0 33.0 37.0 92-93 35.458878877275815 37.0 33.0 37.0 33.0 37.0 94-95 35.41358332442648 37.0 33.0 37.0 33.0 37.0 96-97 35.38773854247829 37.0 33.0 37.0 33.0 37.0 98-99 35.34135389382729 37.0 33.0 37.0 33.0 37.0 100 35.2779938642543 37.0 33.0 37.0 33.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 0.0 10 0.0 11 0.0 12 1.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 2.0 19 9.0 20 21.0 21 99.0 22 407.0 23 1150.0 24 2750.0 25 5919.0 26 10847.0 27 18013.0 28 27328.0 29 39557.0 30 54390.0 31 74250.0 32 100093.0 33 138338.0 34 200059.0 35 326537.0 36 717676.0 37 2267484.0 38 3075568.0 39 173162.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.02485275747604 0.0 24.51359231944508 29.461554923078882 2 14.949708347399623 23.892951869371927 38.50571900100724 22.651620782221205 3 16.508178114367794 24.66251366936114 33.20805216960929 25.621256046661774 4 12.953580803561056 23.105408622335595 37.54149608241584 26.39951449168751 5 17.278788163690812 36.412232843794676 32.254550884460215 14.054428108054298 6 27.886999404589186 37.32186233222707 20.40564245407685 14.385495809106896 7 26.010895451141547 33.11493308851493 22.4639501353464 18.41022132499712 8 24.21599519247584 32.004292155797735 22.25394582356016 21.52576682816626 9 23.930081876936175 20.291619969473274 23.767868026992144 32.01043012659841 10-11 24.46546085032185 26.049769266212504 28.82753283572454 20.65723704774111 12-13 24.936425690946812 24.304843702241506 28.631449552308297 22.127281054503385 14-15 22.390999522924837 26.627720043833957 26.893443029746628 24.08783740349458 16-17 21.358949500121724 28.87990603927942 27.772942359339204 21.988202101259652 18-19 21.467597315881587 27.827883809855592 29.682166427506964 21.02235244675586 20-21 22.259139243929226 27.16563008766378 29.617102506335293 20.958128162071706 22-23 22.095313333212587 26.929479271381705 29.403485976554705 21.571721418850995 24-25 21.75023837837565 27.14114053602409 29.59967576806795 21.508945317532305 26-27 21.690610376008763 27.358859172456572 29.394603873096887 21.555926578437777 28-29 21.67227019668858 27.359537468968192 29.409297092593818 21.55889524174941 30-31 21.894010458201883 27.17998486562786 29.4288053390771 21.49719933709315 32-33 21.685893463749622 27.494090789460536 29.305186779359488 21.51482896743035 34-35 21.882000330208683 27.37217870827203 29.161244906211138 21.584576055308148 36-37 21.83848602557712 27.377034791068827 29.206086106625477 21.57839307672857 38-39 21.65900500175293 27.68397403379878 29.140562802842833 21.516458161605456 40-41 22.013266865435607 27.37790143578011 28.89378866664925 21.715043032135032 42-43 21.86320352844411 27.450681002233818 28.88196202069968 21.804153448622394 44-45 22.02510590964968 27.735778471142186 28.48412701526119 21.754988603946945 46-47 22.121469946447757 27.616493745046455 28.201159651270334 22.06087665723545 48-49 21.95635917961184 27.78869751086142 28.233048817827346 22.021894491699392 50-51 22.005095895433723 28.09634179165565 27.939196941061482 21.95936537184915 52-53 22.275230955755788 27.772546663493486 27.821811252372818 22.130411128377908 54-55 22.170987776516927 27.70962076781028 27.961563894693743 22.15782756097905 56-57 22.155081389022254 28.049482835395985 27.801980878575037 21.99345489700672 58-59 22.23243628065516 27.8231900541971 27.85276354867551 22.091610116472225 60-61 22.135753074850157 27.90562760675288 27.91175249072329 22.046866827673675 62-63 22.114799393906573 28.066897231707994 27.754994122194105 22.06330925219133 64-65 22.230116836465896 27.810423384642974 27.74862048883421 22.210839290056924 66-67 22.183170713074375 27.903265183944452 27.708284301599107 22.205279801382062 68-69 22.22603920985869 27.977614351984048 27.70195962245398 22.09438681570328 70-71 22.209393293925917 27.616162192486488 27.761655406173258 22.412789107414337 72-73 22.202456455644782 27.7224241475865 27.72612281962098 22.34899657714774 74-75 22.091059880143074 27.932972742986646 27.68208140696257 22.293885969907713 76-77 22.444235618356277 27.69662462793049 27.464843356363524 22.39429639734971 78-79 22.57206831359327 27.786341031758727 27.364605465905118 22.276985188742884 80-81 22.234869897636518 27.918832924471577 27.50151967223382 22.344777505658094 82-83 22.34527749750148 27.67763541697744 27.64183424636511 22.33525283915597 84-85 22.40554579299776 27.67495706152815 27.671744290823007 22.247752854651083 86-87 22.245436814679703 27.760098403885607 27.649351907628407 22.345112873806283 88-89 22.348144546170214 27.653842909621662 27.589580420419672 22.40843212378845 90-91 22.348180960813576 27.603338015140473 27.731593417118024 22.316887606927928 92-93 22.319215127571216 27.67199923407702 27.682845163425508 22.32594047492626 94-95 22.362596241761423 27.556518316382544 27.680366151141488 22.400519290714545 96-97 22.389907120318732 27.835710114987883 27.844582247008088 21.929800517685297 98-99 23.44372017070748 29.929639812958747 27.36841979396047 19.258220222373307 100 22.572083092513218 30.277244711869244 21.792624779901615 25.358047415715916 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1390.0 1 1269.5 2 1889.0 3 2832.0 4 3922.5 5 6357.5 6 8419.0 7 10040.0 8 11498.5 9 11849.5 10 11228.0 11 10538.0 12 11511.5 13 14612.5 14 22113.5 15 33368.0 16 43422.5 17 49700.0 18 50938.0 19 47922.5 20 43195.0 21 38051.0 22 34678.5 23 35117.5 24 39665.5 25 48326.5 26 60417.5 27 74404.5 28 89162.5 29 104838.5 30 120528.0 31 135972.0 32 152117.5 33 168407.5 34 184164.0 35 198790.0 36 215375.5 37 230216.5 38 239469.0 39 248447.0 40 259548.5 41 269413.5 42 275312.5 43 280251.0 44 284801.5 45 288366.0 46 289532.5 47 289671.5 48 288585.0 49 283182.0 50 276436.0 51 267706.5 52 255275.0 53 241365.0 54 226550.0 55 211016.0 56 194970.5 57 177194.5 58 158667.5 59 138954.0 60 117596.0 61 96633.0 62 76910.0 63 59582.5 64 44845.0 65 33100.0 66 24724.5 67 19030.5 68 14495.0 69 10515.5 70 7543.0 71 5358.0 72 3724.5 73 2532.0 74 1703.5 75 1172.0 76 767.0 77 465.5 78 293.5 79 217.0 80 147.5 81 92.5 82 72.0 83 56.0 84 44.0 85 34.0 86 23.0 87 15.0 88 9.0 89 4.0 90 1.5 91 1.0 92 1.0 93 1.0 94 0.5 95 0.0 96 0.0 97 0.0 98 0.5 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 2.3501239552143789E-4 2 7.60334220804652E-4 3 0.004575829583387997 4 0.022851499399819813 5 0.013838082818644667 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 1.3824258560084583E-5 20-21 2.07368751823981E-5 22-23 5.875874839994744E-4 24-25 0.014291324536828336 26-27 0.05831142533913962 28-29 0.08650423255570634 30-31 0.07232701897631848 32-33 0.03274881327181737 34-35 0.0036649873328440654 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 1.4686117646229489E-5 54-55 5.172433030477527E-4 56-57 7.587691395796002E-4 58-59 7.490752852871951E-6 60-61 0.0 62-63 7.595535890881923E-6 64-65 7.649819418362811E-6 66-67 6.16710590593668E-5 68-69 1.9430329173869817E-4 70-71 0.0016379866181979374 72-73 0.017581406852323688 74-75 0.07028625333632614 76-77 0.9438836033878928 78-79 3.9674718927951456 80-81 0.0011543235639355262 82-83 0.01731908067741733 84-85 0.0493104790272824 86-87 0.03602070352468101 88-89 0.008408741789242375 90-91 2.5826695298715E-5 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 102.0 20-21 401.0 22-23 937.0 24-25 2222.0 26-27 3149.0 28-29 5750.0 30-31 11251.0 32-33 15377.0 34-35 21586.0 36-37 29259.0 38-39 34632.0 40-41 37889.0 42-43 47049.0 44-45 57467.0 46-47 56200.0 48-49 48489.0 50-51 42425.0 52-53 41901.0 54-55 44421.0 56-57 46744.0 58-59 46261.0 60-61 46012.0 62-63 46005.0 64-65 49275.0 66-67 52444.0 68-69 53363.0 70-71 52482.0 72-73 52136.0 74-75 53828.0 76-77 56191.0 78-79 56709.0 80-81 56552.0 82-83 56315.0 84-85 57145.0 86-87 60702.0 88-89 65863.0 90-91 68402.0 92-93 71703.0 94-95 92460.0 96-97 342351.0 98-99 1307088.0 100-101 3943123.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 85.54570417416303 #Duplication Level Percentage of deduplicated Percentage of total 1 89.8828999570384 76.89095970040698 2 7.213904642652675 12.342371050019741 3 1.6595388090164833 4.258992480650008 4 0.5737741139324962 1.9633564245304738 5 0.2655404487477417 1.1357922337424406 6 0.14151415448602728 0.7263556797671097 7 0.08038684583426642 0.4813724533262543 8 0.04578377656333743 0.31332843246905945 9 0.031166582054188523 0.23995504876746504 >10 0.10311320555478429 1.359740286340716 >50 0.001646589722012961 0.09086518375551055 >100 6.043667473206403E-4 0.10628628601539584 >500 7.590494185200917E-5 0.03372208153590472 >1k 5.0602708440057344E-5 0.056902658672979334 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.3824258560084583E-5 2 0.0 4.1472775680253744E-5 0.0 0.0 1.3824258560084583E-5 3 0.0 4.1472775680253744E-5 0.0 0.0 1.3824258560084583E-5 4 0.0 4.1472775680253744E-5 0.0 1.3824258560084583E-5 2.7648517120169165E-5 5 0.0 4.1472775680253744E-5 0.0 1.3824258560084583E-5 2.7648517120169165E-5 6 6.912129280042291E-5 4.1472775680253744E-5 0.0 1.3824258560084583E-5 2.7648517120169165E-5 7 6.912129280042291E-5 4.1472775680253744E-5 0.0 1.3824258560084583E-5 2.7648517120169165E-5 8 6.912129280042291E-5 4.1472775680253744E-5 0.0 1.3824258560084583E-5 2.7648517120169165E-5 9 8.294555136050749E-5 6.912129280042291E-5 0.0 6.912129280042291E-5 5.529703424033833E-5 10-11 8.294555136050749E-5 8.294555136050749E-5 0.0 8.294555136050749E-5 5.529703424033833E-5 12-13 1.1059406848067666E-4 8.294555136050749E-5 0.0 8.294555136050749E-5 5.529703424033833E-5 14-15 1.1059406848067666E-4 1.1750619776071896E-4 0.0 8.294555136050749E-5 6.220916352038061E-5 16-17 1.3133045632080355E-4 1.3824258560084582E-4 0.0 8.294555136050749E-5 6.912129280042291E-5 18-19 1.3824258560084582E-4 1.3824258560084582E-4 0.0 8.294555136050749E-5 6.912129280042291E-5 20-21 1.3824258560084582E-4 1.3824258560084582E-4 0.0 9.676980992059207E-5 6.912129280042291E-5 22-23 1.520668441609304E-4 1.6589110272101498E-4 0.0 1.2441832704076125E-4 6.912129280042291E-5 24-25 1.9353961984118416E-4 1.7971536128109957E-4 0.0 1.4515471488088812E-4 8.294555136050749E-5 26-27 1.9353961984118416E-4 1.9353961984118416E-4 0.0 1.7971536128109957E-4 8.294555136050749E-5 28-29 2.0736387840126873E-4 1.9353961984118416E-4 0.0 3.3178220544203E-4 8.294555136050749E-5 30-31 2.2118813696135332E-4 2.0045174912122646E-4 0.0 7.11949315844356E-4 8.294555136050749E-5 32-33 2.488366540815225E-4 2.0736387840126873E-4 0.0 0.0013686015974483736 8.294555136050749E-5 34-35 2.7648517120169164E-4 2.557487833615648E-4 0.0 0.002536751445775521 8.294555136050749E-5 36-37 3.041336883218608E-4 3.041336883218608E-4 0.0 0.004202574602265714 8.294555136050749E-5 38-39 3.041336883218608E-4 3.1795794688194536E-4 0.0 0.006753150306601318 1.1059406848067666E-4 40-41 3.179579468819454E-4 3.870792396823683E-4 0.0 0.009400495820857516 1.2441832704076125E-4 42-43 3.179579468819454E-4 4.769369203229181E-4 0.0 0.012338150764875488 1.3133045632080355E-4 44-45 3.179579468819454E-4 5.667946009634679E-4 0.0 0.01598775502473782 1.3824258560084582E-4 46-47 3.179579468819454E-4 5.667946009634679E-4 0.0 0.019519853086839428 1.3824258560084582E-4 48-49 3.248700761619877E-4 5.667946009634679E-4 0.0 0.02320401799310197 1.520668441609304E-4 50-51 3.386943347220723E-4 6.082673766437216E-4 0.0 0.02616240932496007 1.520668441609304E-4 52-53 3.5943072256219914E-4 6.082673766437216E-4 0.0 0.02995716829970329 2.0045174912122646E-4 54-55 3.5943072256219914E-4 6.151795059237639E-4 0.0 0.03355838765460532 2.488366540815225E-4 56-57 3.6634285184224146E-4 6.359158937638908E-4 0.0 0.03749138921494939 2.488366540815225E-4 58-59 3.7325498112228373E-4 6.428280230439331E-4 0.0 0.04194280047129662 2.488366540815225E-4 60-61 3.939913689624106E-4 6.497401523239754E-4 0.0 0.04601404461724153 2.488366540815225E-4 62-63 4.2855201536262205E-4 6.497401523239754E-4 0.0 0.050023079599666065 2.6266091264160704E-4 64-65 4.2855201536262205E-4 7.672463500846944E-4 0.0 0.05419109355553156 2.6957304192164937E-4 66-67 4.2855201536262205E-4 7.741584793647366E-4 0.0 0.05851117435555799 2.7648517120169164E-4 68-69 4.4237627392270664E-4 7.810706086447789E-4 0.0 0.0624027031402218 2.7648517120169164E-4 70-71 4.4237627392270664E-4 7.879827379248212E-4 0.0 0.06614216508072468 2.7648517120169164E-4 72-73 4.5620053248279123E-4 7.948948672048635E-4 0.0 0.06892084105130168 3.179579468819454E-4 74-75 4.5620053248279123E-4 8.156312550449904E-4 0.0 0.07107742538667489 3.179579468819454E-4 76-77 4.631126617628335E-4 8.571040307252441E-4 0.0 0.07346210998828948 3.248700761619877E-4 78-79 4.7002479104287577E-4 8.709282892853286E-4 0.0 0.07498969055917881 3.3178220544202995E-4 80-81 4.7002479104287577E-4 8.709282892853286E-4 0.0 0.07554266090158221 3.5943072256219914E-4 82-83 4.97673308163045E-4 8.709282892853286E-4 0.0 0.0759159158827045 3.870792396823683E-4 84-85 4.97673308163045E-4 9.193131942456247E-4 0.0 0.07607489485614546 3.870792396823683E-4 86-87 4.97673308163045E-4 9.26225323525667E-4 0.0 0.07610254337326562 3.870792396823683E-4 88 4.97673308163045E-4 9.815223577660053E-4 0.0 0.07610254337326562 3.870792396823683E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 10260 0.0 53.994625 1 GTATCAA 19405 0.0 39.29288 1 ATCAACG 23170 0.0 32.261074 3 TCAACGC 24180 0.0 30.858917 4 TATCAAC 24735 0.0 30.393185 2 CAACGCA 24785 0.0 30.16932 5 AACGCAG 25150 0.0 29.761806 6 ACGCAGA 25640 0.0 29.159653 7 CGCAGAG 29755 0.0 25.098225 8 GTGGTAT 4620 0.0 24.834558 1 TGGTATC 4345 0.0 24.238676 2 GCAGAGT 34170 0.0 21.755163 9 GTACATG 22075 0.0 20.518639 1 GAGTACT 21585 0.0 20.391994 12-13 TACATGG 21985 0.0 19.979494 2 ACATGGG 21710 0.0 19.680283 3 AGAGTAC 30920 0.0 19.439709 10-11 CAGAGTA 33205 0.0 19.332823 10-11 GTACTTT 23680 0.0 18.453173 14-15 AGTACTT 22985 0.0 18.060705 12-13 >>END_MODULE