##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138869_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 8099311 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.57607813800458 33.0 31.0 33.0 18.0 34.0 2 32.099772313965964 33.0 32.0 33.0 31.0 34.0 3 32.191697664159335 33.0 33.0 33.0 30.0 34.0 4 32.69287189984432 33.0 33.0 34.0 31.0 34.0 5 32.7303831153045 33.0 33.0 34.0 32.0 34.0 6 36.133387765947006 38.0 36.0 38.0 33.0 38.0 7 37.15686210839416 38.0 38.0 38.0 36.0 38.0 8 37.03829943065527 38.0 38.0 38.0 36.0 38.0 9 37.343896783318975 38.0 38.0 38.0 37.0 38.0 10-11 37.444368724697696 38.0 38.0 38.0 37.0 38.0 12-13 37.467786395657605 38.0 38.0 38.0 37.0 38.0 14-15 37.49649235595472 38.0 38.0 38.0 37.0 38.0 16-17 37.50385890849233 38.0 38.0 38.0 37.0 38.0 18-19 37.519474434306815 38.0 38.0 38.0 37.5 38.0 20-21 37.52797530720673 38.0 38.0 38.0 38.0 38.0 22-23 37.54531450589428 38.0 38.0 38.0 38.0 38.0 24-25 37.50832372303577 38.0 38.0 38.0 38.0 38.0 26-27 37.5183399767033 38.0 38.0 38.0 38.0 38.0 28-29 37.51332762698627 38.0 38.0 38.0 38.0 38.0 30-31 37.502253768406554 38.0 38.0 38.0 38.0 38.0 32-33 37.49314561895581 38.0 38.0 38.0 38.0 38.0 34-35 37.473910671595604 38.0 38.0 38.0 37.5 38.0 36-37 37.45122690520248 38.0 38.0 38.0 37.0 38.0 38-39 37.410798641705384 38.0 38.0 38.0 37.0 38.0 40-41 37.40885794733489 38.0 38.0 38.0 37.0 38.0 42-43 37.39105371299954 38.0 38.0 38.0 37.0 38.0 44-45 37.35667633534237 38.0 38.0 38.0 37.0 38.0 46-47 37.31434542651899 38.0 38.0 38.0 37.0 38.0 48-49 37.267209296377395 38.0 38.0 38.0 37.0 38.0 50-51 37.24931502776159 38.0 38.0 38.0 37.0 38.0 52-53 37.24215426904646 38.0 38.0 38.0 37.0 38.0 54-55 37.22291766612435 38.0 38.0 38.0 37.0 38.0 56-57 37.19280657596866 38.0 38.0 38.0 37.0 38.0 58-59 37.197017464716254 38.0 38.0 38.0 37.0 38.0 60-61 37.213729764784645 38.0 38.0 38.0 37.0 38.0 62-63 37.221219686976866 38.0 38.0 38.0 37.0 38.0 64-65 37.230078096609475 38.0 38.0 38.0 37.0 38.0 66-67 37.236260384067734 38.0 38.0 38.0 37.0 38.0 68-69 37.237030366667675 38.0 38.0 38.0 37.0 38.0 70-71 37.20230093445188 38.0 38.0 38.0 37.0 38.0 72-73 37.178812818869886 38.0 38.0 38.0 36.5 38.0 74-75 37.16911324215672 38.0 38.0 38.0 36.5 38.0 76-77 37.17493861692619 38.0 38.0 38.0 36.0 38.0 78-79 37.18442395475947 38.0 38.0 38.0 36.0 38.0 80-81 37.177722748930634 38.0 38.0 38.0 36.0 38.0 82-83 37.18079777420297 38.0 38.0 38.0 36.0 38.0 84-85 37.176081009830185 38.0 38.0 38.0 36.0 38.0 86-87 37.15044639784679 38.0 38.0 38.0 36.0 38.0 88-89 37.116875912100426 38.0 38.0 38.0 36.0 38.0 90-91 37.12465271369609 38.0 38.0 38.0 36.0 38.0 92-93 37.10662099826223 38.0 38.0 38.0 36.0 38.0 94-95 37.09178041489922 38.0 38.0 38.0 36.0 38.0 96-97 37.08781642756347 38.0 38.0 38.0 36.0 38.0 98-99 37.129725081271545 38.0 38.0 38.0 36.0 38.0 100 35.52413873865618 38.0 35.0 38.0 29.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 5.0 18 15.0 19 21.0 20 87.0 21 179.0 22 508.0 23 1270.0 24 2939.0 25 5497.0 26 9878.0 27 16026.0 28 25594.0 29 37923.0 30 53158.0 31 71152.0 32 92917.0 33 122508.0 34 178664.0 35 314648.0 36 892015.0 37 6274307.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.82371944971616 20.126995987683397 14.246211807399419 24.80307275520103 2 13.888601141504505 20.68017884484248 43.31116560408657 22.120054409566446 3 17.605744488636134 26.415358047122773 30.882404688497576 25.096492775743517 4 11.93148404845795 18.299791179768256 39.454664723949975 30.314060047823823 5 12.847815021889666 37.70210001010083 35.94186316162 13.508221806389505 6 29.02446567946262 38.38518243231981 19.090884958647685 13.499466929569884 7 25.75926838212144 33.111771249649664 23.347198711989044 17.78176165623985 8 23.723045543385794 37.10276554422538 21.658128902338593 17.51606001005024 9 25.342862540142306 16.95887674382139 21.548317078862272 36.14994363717403 10-11 23.773804421228746 26.98715242330226 29.298886528536784 19.94015662693221 12-13 24.763612608529293 24.505195565400566 29.326278494553428 21.404913331516717 14-15 21.874150776529017 25.800984799818156 27.06595659803655 25.258907825616276 16-17 21.30923852658578 29.09953698530653 27.682867098201314 21.908357389906378 18-19 21.337833551520617 27.91475719354399 29.72452224639849 21.0228870085369 20-21 22.117445238197835 27.07152534449952 29.581880362943906 21.22914905435874 22-23 21.83787064149555 27.211921523305755 29.43615634837291 21.514051486825785 24-25 21.73980474915857 27.316564759743372 29.56692819559609 21.376702295501964 26-27 21.687732329153132 27.507814953461 29.475980402629563 21.328472314756304 28-29 21.443375674874872 27.578076218480795 29.50462860904296 21.47391949760137 30-31 22.090698829837127 27.24601307092549 29.469072102796503 21.194215996440878 32-33 21.362350005075907 27.621278551049684 29.467532971396547 21.54883847247786 34-35 21.681792055524866 27.535350491147753 29.56182685305751 21.22103060026987 36-37 21.51351905552996 27.53142849007752 29.516605614425156 21.438446839967366 38-39 21.41260895019933 27.295083883452286 29.729588075048284 21.562719091300096 40-41 21.64296658446964 27.156424973151832 29.699283456054992 21.501324986323528 42-43 21.798582354992178 27.13924220428173 29.483512247033193 21.5786631936929 44-45 21.581406337272014 27.484378410099158 29.329807525242046 21.60440772738678 46-47 21.8842616120762 27.24322726984895 28.95737381248894 21.915137305585908 48-49 21.772433010625665 27.318994399959017 28.943867547449937 21.96470504196538 50-51 21.584068638631262 27.494255518737234 28.9838847331361 21.937791109495404 52-53 21.73950876743085 27.462744178809245 29.079581706365026 21.71816534739488 54-55 21.75780301236213 27.413054602306016 28.8279640128132 22.001178372518655 56-57 21.98014042609401 27.67426304732487 28.484094424733364 21.86150210184776 58-59 21.621260167306563 27.930538616961247 28.887373907882818 21.56082730784937 60-61 21.89498786651467 28.166589961721517 28.42051049771047 21.517911674053348 62-63 21.632806608344424 28.438827868742806 28.314764168655188 21.61360135425758 64-65 21.594031333672962 28.409184085169475 28.310287847549105 21.686496733608458 66-67 21.705323410612475 28.307580972949737 28.251827739394557 21.735267877043228 68-69 21.700788976142338 28.198606512866007 28.35643796779685 21.744166543194805 70-71 21.79533863969367 27.86666232224375 28.4201652847439 21.91783375331868 72-73 21.900160898709757 27.641549541688104 28.50150512143348 21.956784438168658 74-75 21.859530620583214 27.797860402573825 28.362198719228342 21.98041025761461 76-77 21.92666917295693 27.72901265326585 28.308944176911528 22.035373996865694 78-79 21.874708075035045 27.737407809422766 28.27411883098585 22.113765284556337 80-81 21.942415886131744 27.759536213382326 28.25284077087594 22.045207129609988 82-83 21.980972872283335 27.72907355729742 28.31528018503483 21.97467338538442 84-85 22.13016566994399 27.680692446889545 28.190023494234257 21.999118388932214 86-87 21.911471149389115 27.745421612969622 28.26663763282259 22.076469604818673 88-89 22.0568800584231 27.714344478236303 28.135438007838747 22.09333745550185 90-91 22.114458044485847 27.68214620030302 28.189416921170835 22.013978834040298 92-93 22.115277528479176 27.72091450611744 28.165327411390003 21.998480554013383 94-95 21.998493548555334 27.84722239245148 28.13677179339993 22.017512265593258 96-97 22.104699131988195 27.885785984395934 28.20073121064044 21.808783672975427 98-99 23.14107428479324 29.812168540159384 28.407385574485204 18.639371600562175 100 22.048078907718406 30.62146799720044 22.434095065095185 24.89635802998597 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1761.0 1 1696.5 2 2512.0 3 3749.0 4 4799.5 5 6401.0 6 7798.5 7 9831.0 8 12655.0 9 14372.0 10 14526.0 11 14610.0 12 16033.5 13 19164.0 14 25079.5 15 31391.0 16 35556.5 17 37621.0 18 36678.5 19 33764.5 20 30809.0 21 29033.5 22 30189.0 23 34992.0 24 43337.5 25 55271.5 26 70915.5 27 88803.5 28 106943.0 29 126466.5 30 146108.5 31 166313.5 32 188043.0 33 208617.5 34 228500.5 35 247250.0 36 266778.5 37 284758.0 38 295921.5 39 304745.5 40 315128.0 41 321525.0 42 327070.5 43 349840.5 44 362980.5 45 358165.0 46 349607.5 47 338042.5 48 332462.5 49 323447.5 50 311981.0 51 300632.5 52 287104.0 53 272553.0 54 257100.5 55 237778.0 56 216587.5 57 193269.5 58 169777.5 59 147838.5 60 124667.5 61 102371.5 62 80997.0 63 62308.5 64 47602.0 65 35969.0 66 26866.0 67 20391.5 68 15702.0 69 11756.0 70 8706.0 71 6388.5 72 4679.5 73 3371.5 74 2355.0 75 1579.5 76 1008.5 77 610.0 78 402.0 79 265.5 80 171.5 81 104.5 82 60.5 83 39.5 84 31.0 85 26.0 86 18.0 87 11.5 88 7.5 89 3.0 90 1.5 91 1.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.011963980639834672 6 7.408037547885246E-5 7 1.234672924647541E-5 8 1.234672924647541E-5 9 1.234672924647541E-5 10-11 1.8520093869713115E-5 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 6.420977828487038E-4 26-27 0.0 28-29 7.288462715591028E-4 30-31 0.0023001430726090244 32-33 1.9832566040275728E-4 34-35 3.108253700391571E-5 36-37 2.997135113473409E-4 38-39 5.593120587365643E-4 40-41 6.076285101069192E-4 42-43 1.2113230912353252E-4 44-45 0.0 46-47 0.001532720232251278 48-49 7.215443568081449E-5 50-51 0.002098668676092271 52-53 0.0014023952911572967 54-55 0.0027151013804033552 56-57 0.0024554170070071888 58-59 0.0037640327847255546 60-61 0.002732864126920314 62-63 0.00292762989939389 64-65 0.004202152987939467 66-67 0.0017315257825977794 68-69 1.3041509748927028E-4 70-71 8.512648107234708E-4 72-73 0.006641004989538927 74-75 0.005765518615926289 76-77 0.004496511665594656 78-79 0.0027470009789942146 80-81 6.227409585213266E-5 82-83 0.0 84-85 0.0 86-87 0.0 88-89 0.0020045462456967445 90-91 3.216776064546674E-4 92-93 0.0 94-95 6.76220592962623E-5 96-97 0.0 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 58.0 20-21 192.0 22-23 483.0 24-25 686.0 26-27 1850.0 28-29 5404.0 30-31 17928.0 32-33 22738.0 34-35 31186.0 36-37 48067.0 38-39 57420.0 40-41 55660.0 42-43 63797.0 44-45 75439.0 46-47 77431.0 48-49 71935.0 50-51 66067.0 52-53 64433.0 54-55 69726.0 56-57 71674.0 58-59 70685.0 60-61 70568.0 62-63 69800.0 64-65 76221.0 66-67 85168.0 68-69 88619.0 70-71 100586.0 72-73 74863.0 74-75 70924.0 76-77 72897.0 78-79 74931.0 80-81 74213.0 82-83 70804.0 84-85 70066.0 86-87 72446.0 88-89 73819.0 90-91 73456.0 92-93 72590.0 94-95 82318.0 96-97 237670.0 98-99 507971.0 100-101 5106522.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 84.49590185722143 #Duplication Level Percentage of deduplicated Percentage of total 1 89.17152156431732 75.3462813455766 2 7.438110778928688 12.569797567589985 3 1.9144691381041827 4.852943892057909 4 0.725957615526355 2.453617737360695 5 0.31267507458187294 1.3209881207534664 6 0.15746736926761162 0.7983208427610574 7 0.08487478883974292 0.5020100279568717 8 0.052982098963830604 0.35814161873899386 9 0.03598349653060724 0.27364121921968715 >10 0.1043638061119546 1.3222901509486256 >50 0.0012067677517148727 0.06520075325630545 >100 2.945919844886153E-4 0.05461190410198384 >500 4.645455998300178E-5 0.03116624371391227 >1k 4.645453167446164E-5 0.05098857596395583 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 1.234672924647541E-5 0.0 0.0 0.0 3 0.0 2.469345849295082E-5 0.0 0.0 0.0 4 0.0 2.469345849295082E-5 0.0 0.0 0.0 5 0.0 6.173364623237705E-5 0.0 0.0 0.0 6 1.234672924647541E-5 6.173364623237705E-5 0.0 0.0 0.0 7 1.234672924647541E-5 6.173364623237705E-5 0.0 0.0 0.0 8 1.234672924647541E-5 7.408037547885246E-5 0.0 0.0 0.0 9 1.234672924647541E-5 9.877383397180328E-5 0.0 2.469345849295082E-5 0.0 10-11 6.173364623237705E-5 9.877383397180328E-5 0.0 2.469345849295082E-5 0.0 12-13 8.642710472532787E-5 9.877383397180328E-5 0.0 2.469345849295082E-5 0.0 14-15 9.260046934856557E-5 1.6050748020418032E-4 0.0 2.469345849295082E-5 0.0 16-17 1.2346729246475412E-4 1.6050748020418032E-4 0.0 3.704018773942623E-5 0.0 18-19 1.3581402171122952E-4 1.7285420945065572E-4 0.0 4.938691698590164E-5 0.0 20-21 1.6050748020418032E-4 1.8520093869713115E-4 0.0 8.025374010209016E-5 0.0 22-23 1.6050748020418032E-4 1.9754766794360655E-4 0.0 1.0494719859504098E-4 0.0 24-25 2.1606776181331967E-4 2.2841449105979507E-4 0.0 1.543341155809426E-4 0.0 26-27 2.469345849295082E-4 2.469345849295082E-4 0.0 2.1606776181331967E-4 0.0 28-29 2.469345849295082E-4 2.469345849295082E-4 0.0 4.691757113660656E-4 0.0 30-31 2.71628043422459E-4 2.9632150191540984E-4 0.0 0.0015248210619397131 0.0 32-33 2.839747726689344E-4 2.9632150191540984E-4 0.0 0.0038953930772629916 0.0 34-35 3.271883250315984E-4 3.1484159578512295E-4 0.0 0.0073277838077831555 0.0 36-37 3.704018773942623E-4 3.3336168965483607E-4 0.0 0.012124488120038853 0.0 38-39 3.704018773942623E-4 3.3336168965483607E-4 0.0 0.019569565855663523 0.0 40-41 4.1978879438016396E-4 3.704018773942623E-4 0.0 0.027477645938031026 0.0 42-43 4.81522440612541E-4 3.8274860664073767E-4 0.0 0.03518817835245492 0.0 44-45 5.309093575984426E-4 4.321355236266394E-4 0.0 0.0438308888249877 0.0 46-47 5.309093575984426E-4 4.568289821195902E-4 0.0 0.05375765913915394 0.0 48-49 5.43256086844918E-4 4.568289821195902E-4 0.0 0.06296214579240135 0.0 50-51 5.679495453378688E-4 5.062158991054918E-4 0.0 0.07264198152163807 0.0 52-53 5.741229099611065E-4 5.123892637287295E-4 0.0 0.08214896304142413 0.0 54-55 6.235098269470082E-4 5.556028160913934E-4 0.0 0.09099539454652378 0.0 56-57 6.420299208167213E-4 5.926430038308197E-4 0.0 0.09728605309760299 0.0 58-59 6.420299208167213E-4 6.235098269470082E-4 0.0 0.10350263127320336 0.0 60-61 6.420299208167213E-4 6.358565561934836E-4 0.0 0.10920682018507501 0.0 62-63 6.420299208167213E-4 6.543766500631968E-4 0.0 0.11475050161674247 0.0 64-65 6.420299208167213E-4 7.408037547885246E-4 0.0 0.12039295688238172 0.0 66-67 6.420299208167213E-4 7.408037547885246E-4 0.0 0.12583169111545414 0.0 68-69 6.667233793096721E-4 7.654972132814755E-4 0.0 0.13112226459756887 0.0 70-71 6.667233793096721E-4 7.654972132814755E-4 0.0 0.13595600909756397 0.0 72-73 6.667233793096721E-4 7.654972132814755E-4 0.0 0.14009833675975647 0.0 74-75 6.667233793096721E-4 7.654972132814755E-4 0.0 0.14333317982233304 0.0 76-77 6.667233793096721E-4 7.716705779047131E-4 0.0 0.1465680228849096 0.0 78-79 6.667233793096721E-4 7.778439425279508E-4 0.0 0.14858671311670832 0.0 80-81 6.667233793096721E-4 7.901906717744262E-4 0.0 0.14939542388235244 0.0 82-83 6.667233793096721E-4 7.901906717744262E-4 0.0 0.1497781724889932 0.0 84-85 6.667233793096721E-4 8.025374010209017E-4 0.0 0.14998806688618327 0.0 86-87 6.728967439329098E-4 8.395775887603279E-4 0.0 0.1501053608140248 0.0 88 6.91416837802623E-4 9.136579642391804E-4 0.0 0.15011153417864803 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 10740 0.0 51.46292 1 CTTATAC 7925 0.0 39.890976 1 GTATCAA 20625 0.0 39.84005 1 ATCAACG 25335 0.0 31.818659 3 TCAACGC 25450 0.0 31.774122 4 CAACGCA 25940 0.0 31.141462 5 TATACAC 11125 0.0 30.951897 3 TATCAAC 26360 0.0 30.83691 2 AACGCAG 26860 0.0 30.102629 6 TTATACA 11910 0.0 27.7808 2 ACGCAGA 30330 0.0 26.630886 7 CGCAGAG 30505 0.0 26.450514 8 ACACATC 13350 0.0 23.740877 6 ACATCTC 13515 0.0 23.669039 8 TACACAT 15230 0.0 23.355587 5 GCAGAGT 35510 0.0 22.722414 9 GTACATG 24875 0.0 22.118032 1 TACATGG 24430 0.0 22.00399 2 ACATGGG 24580 0.0 21.184677 3 TATGCCG 8355 0.0 21.164974 42-43 >>END_MODULE