##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138867_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4979980 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.27271314342628 32.0 30.0 33.0 18.0 34.0 2 32.01219884417206 33.0 32.0 33.0 30.0 34.0 3 32.12423363146037 33.0 33.0 33.0 29.0 34.0 4 32.6566652878124 33.0 33.0 34.0 31.0 34.0 5 32.68770015140623 33.0 33.0 34.0 32.0 34.0 6 36.035561186992716 38.0 36.0 38.0 33.0 38.0 7 37.0682295912835 38.0 38.0 38.0 36.0 38.0 8 36.930155944401385 38.0 38.0 38.0 35.0 38.0 9 37.26718179591083 38.0 38.0 38.0 36.0 38.0 10-11 37.37896708420516 38.0 38.0 38.0 37.0 38.0 12-13 37.41401039763212 38.0 38.0 38.0 37.0 38.0 14-15 37.44633422222579 38.0 38.0 38.0 37.0 38.0 16-17 37.45345121867959 38.0 38.0 38.0 37.0 38.0 18-19 37.46913471540046 38.0 38.0 38.0 37.0 38.0 20-21 37.4789467407325 38.0 38.0 38.0 37.0 38.0 22-23 37.49729930008445 38.0 38.0 38.0 37.0 38.0 24-25 37.46153329522539 38.0 38.0 38.0 37.0 38.0 26-27 37.47439166566433 38.0 38.0 38.0 37.0 38.0 28-29 37.4664968864099 38.0 38.0 38.0 37.0 38.0 30-31 37.45976071329225 38.0 38.0 38.0 37.0 38.0 32-33 37.45628986210269 38.0 38.0 38.0 37.0 38.0 34-35 37.44536031788761 38.0 38.0 38.0 37.0 38.0 36-37 37.42582993347671 38.0 38.0 38.0 37.0 38.0 38-39 37.40150886646248 38.0 38.0 38.0 37.0 38.0 40-41 37.38881761017244 38.0 38.0 38.0 37.0 38.0 42-43 37.372319069853056 38.0 38.0 38.0 37.0 38.0 44-45 37.34785508056276 38.0 38.0 38.0 37.0 38.0 46-47 37.3199200824417 38.0 38.0 38.0 37.0 38.0 48-49 37.28339816749542 38.0 38.0 38.0 37.0 38.0 50-51 37.26593872164139 38.0 38.0 38.0 37.0 38.0 52-53 37.254661526700986 38.0 38.0 38.0 37.0 38.0 54-55 37.23214549712014 38.0 38.0 38.0 37.0 38.0 56-57 37.201146669046224 38.0 38.0 38.0 37.0 38.0 58-59 37.20317513377302 38.0 38.0 38.0 37.0 38.0 60-61 37.21679196592507 38.0 38.0 38.0 37.0 38.0 62-63 37.22176274762509 38.0 38.0 38.0 37.0 38.0 64-65 37.225890029620395 38.0 38.0 38.0 37.0 38.0 66-67 37.22859158324246 38.0 38.0 38.0 37.0 38.0 68-69 37.225433731874915 38.0 38.0 38.0 37.0 38.0 70-71 37.19101419622408 38.0 38.0 38.0 36.5 38.0 72-73 37.1668803530097 38.0 38.0 38.0 36.0 38.0 74-75 37.151680767165914 38.0 38.0 38.0 36.0 38.0 76-77 37.15207856254313 38.0 38.0 38.0 36.0 38.0 78-79 37.15220911682137 38.0 38.0 38.0 36.0 38.0 80-81 37.141028083725445 38.0 38.0 38.0 36.0 38.0 82-83 37.13831158224794 38.0 38.0 38.0 36.0 38.0 84-85 37.12532476603168 38.0 38.0 38.0 36.0 38.0 86-87 37.09472124468985 38.0 38.0 38.0 36.0 38.0 88-89 37.05735260134535 38.0 38.0 38.0 36.0 38.0 90-91 37.05833759250754 38.0 38.0 38.0 36.0 38.0 92-93 37.03315843703958 38.0 38.0 38.0 36.0 38.0 94-95 37.01846782490074 38.0 38.0 38.0 36.0 38.0 96-97 37.01077774040234 38.0 38.0 38.0 36.0 38.0 98-99 37.05275526957068 38.0 38.0 38.0 36.0 38.0 100 35.403788047745934 38.0 35.0 38.0 29.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 5.0 18 3.0 19 13.0 20 48.0 21 127.0 22 313.0 23 894.0 24 1920.0 25 3648.0 26 6275.0 27 10495.0 28 15869.0 29 22934.0 30 32697.0 31 44202.0 32 59265.0 33 79662.0 34 117593.0 35 208253.0 36 573818.0 37 3801946.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.980385463395436 19.693753790175865 14.008409672328002 25.3174510741007 2 14.139855983357364 20.44154795802393 42.79890682291897 22.61968923569974 3 18.018787224045077 25.69136823842666 30.200462652460452 26.089381885067812 4 12.354868895055803 17.695994763031177 39.10624139052767 30.842894951385347 5 13.370588104165817 37.18370480661653 35.66707842921858 13.778628659999073 6 29.966080144193523 37.734574517858924 18.857708895668935 13.441636442278615 7 26.494408912166094 32.39365065595658 23.285178511796936 17.826761920080386 8 23.96919264736003 37.07464688613207 21.312756276129623 17.643404190378277 9 25.341969244856404 17.102859850842776 21.505869501483943 36.04930140281688 10-11 24.219353981081845 26.698812725678707 28.97309988116413 20.108733412075313 12-13 24.96160627151113 24.152416274764153 29.10804862670131 21.777928827023402 14-15 22.09792007196816 25.481578239270036 26.71207514889618 25.70842653986562 16-17 21.82275832433062 28.654301824505318 27.309959076140867 22.21298077502319 18-19 21.830890887111998 27.778635657171314 29.060287390712414 21.330186065004277 20-21 22.5204028480653 27.035033741356827 28.91435281776374 21.530210592814132 22-23 22.286144997779527 26.952462988676135 28.7808219356887 21.98057007785564 24-25 22.120005108958992 27.067963613929784 28.83784437275479 21.974186904356433 26-27 22.07336146753061 27.17269392888793 28.80021288934524 21.95373171423622 28-29 21.97516709970677 27.182737565444437 28.878409230278123 21.96368610457067 30-31 22.23558074137402 27.132995490921726 28.728947011795665 21.90247675590859 32-33 22.146517961581196 27.112862502388417 28.745479878490432 21.99513965753995 34-35 22.18287704631407 27.1517493327684 28.772553367168076 21.892820253749456 36-37 22.11692042985294 27.17444372291235 28.733023992355434 21.975611854879276 38-39 22.001951666942684 27.17555065798693 28.863971871536492 21.95852580353389 40-41 22.209780047970444 27.034908997247115 28.74466607715301 22.010644877629435 42-43 22.207111411424577 27.10658348442138 28.583489579437927 22.102815524716114 44-45 22.20663098981698 27.236287522644375 28.521672361420585 22.03540912611806 46-47 22.256915381415034 27.177431411949065 28.279328615077652 22.286324591558245 48-49 22.218237432171716 27.279298735167778 28.2679374707919 22.23452636186861 50-51 22.169956557345284 27.35334963266874 28.229602159654842 22.247091650331132 52-53 22.365684910928913 27.294678710067156 28.1338882441911 22.205748134812833 54-55 22.28838528167298 27.224279912101974 28.156167585467973 22.331167220757074 56-57 22.308072652928637 27.374664199106768 28.07694708417362 22.240316063790978 58-59 22.210791482436605 27.46572810114469 28.17623169150271 22.14724872491599 60-61 22.33476664660848 27.470117339856507 28.066059338793014 22.129056674742 62-63 22.266723440617564 27.610264471243447 27.99366731469821 22.129344773440778 64-65 22.21950853696107 27.56847494941961 27.977498256935775 22.234518256683547 66-67 22.290995573597545 27.56479018497913 27.863488848560504 22.280725392862816 68-69 22.244192899873696 27.520435654797108 27.963744826501795 22.271626618827398 70-71 22.249690847678412 27.28266053280049 27.975870484691086 22.491778134830017 72-73 22.38189876540697 27.249777529463966 27.959483982998773 22.408839722130296 74-75 22.232861467777624 27.407358798832455 27.921898049799932 22.437881683589993 76-77 22.381054294176657 27.38196002881677 27.815354947341742 22.42163072966483 78-79 22.339444991768108 27.348079615255845 27.76363552211371 22.548839870862338 80-81 22.347776887731438 27.376094968416574 27.783170792312674 22.49295735153932 82-83 22.373439164631144 27.33254710708899 27.87203083268369 22.421982895596173 84-85 22.54657058260866 27.355407894836127 27.701887908501867 22.39613361405335 86-87 22.352455423276147 27.402788201303146 27.79225591752084 22.45250045789987 88-89 22.451869568545003 27.32667667044803 27.765032434115188 22.456421326891775 90-91 22.4606563153069 27.477933067139983 27.686227283739985 22.375183333813137 92-93 22.498161957980294 27.318986160087317 27.810717898739295 22.372133983193095 94-95 22.384660406315845 27.49110371198918 27.7396144941862 22.38462138750878 96-97 22.499136710122773 27.600239014099852 27.770005050988573 22.1306192247888 98-99 23.606969477058204 29.460704462896985 27.97289625627971 18.959429803765097 100 22.40578864789588 30.327436875151054 21.918475318156222 25.348299158796845 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 824.0 1 789.0 2 1197.5 3 1791.5 4 2219.0 5 2931.5 6 3656.5 7 4672.0 8 5965.0 9 6689.5 10 6677.5 11 6691.0 12 7329.5 13 8694.0 14 11161.0 15 13882.0 16 15812.0 17 16749.0 18 16349.0 19 15080.0 20 13954.0 21 13681.0 22 14797.0 23 17551.5 24 22145.0 25 28749.0 26 37231.0 27 46997.0 28 57489.5 29 69083.5 30 80330.5 31 91398.0 32 103526.5 33 114675.5 34 125205.0 35 136193.5 36 147971.5 37 158803.5 38 167250.5 39 174629.5 40 182798.5 41 190023.0 42 194316.0 43 201293.0 44 206520.5 45 208332.0 46 210123.5 47 209522.0 48 208195.0 49 205694.5 50 202171.0 51 197112.5 52 190217.0 53 181904.5 54 172139.5 55 160269.0 56 147066.5 57 132903.0 58 117941.5 59 102779.5 60 86058.5 61 69915.5 62 55682.5 63 43010.0 64 32542.5 65 24164.5 66 17705.0 67 13297.5 68 10084.0 69 7480.5 70 5506.0 71 3964.5 72 2764.0 73 1842.0 74 1185.0 75 732.0 76 425.5 77 249.0 78 162.5 79 109.0 80 71.0 81 43.0 82 26.5 83 16.5 84 12.0 85 7.0 86 4.5 87 4.5 88 3.5 89 3.0 90 3.0 91 2.0 92 0.5 93 0.0 94 0.0 95 0.5 96 0.5 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.011506070305503236 6 1.204824115759501E-4 7 2.0080401929325018E-5 8 0.0 9 0.0 10-11 4.0160803858650036E-5 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 5.823858016751423E-4 26-27 0.0 28-29 5.524507821598174E-4 30-31 0.002201610634000529 32-33 1.813031161473088E-4 34-35 1.0097702338516787E-4 36-37 2.8379205785628145E-4 38-39 6.318672891170949E-4 40-41 5.947052773941244E-4 42-43 1.4442535164220394E-4 44-45 0.0 46-47 0.0011734210493506319 48-49 6.338100923271161E-5 50-51 0.001639559635574867 52-53 0.0013514694817275425 54-55 0.0024745697436410583 56-57 0.0022330853047300885 58-59 0.0032621578811922103 60-61 0.0027134860032854225 62-63 0.0027693843223143477 64-65 0.004121028527651088 66-67 0.0013746402503981062 68-69 9.175148422361902E-5 70-71 4.979765360404728E-4 72-73 0.006094391241669634 74-75 0.005346220281270196 76-77 0.004263500021496138 78-79 0.0024042926240509807 80-81 0.0 82-83 0.0 84-85 0.0 86-87 0.0 88-89 0.0019795343882948744 90-91 1.7833377152488622E-4 92-93 0.0 94-95 1.4306875455137474E-4 96-97 0.0 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 21.0 20-21 110.0 22-23 273.0 24-25 315.0 26-27 970.0 28-29 2485.0 30-31 9147.0 32-33 11530.0 34-35 16017.0 36-37 25471.0 38-39 30077.0 40-41 28991.0 42-43 33044.0 44-45 39035.0 46-47 39723.0 48-49 37554.0 50-51 35345.0 52-53 33846.0 54-55 36538.0 56-57 37765.0 58-59 37829.0 60-61 37271.0 62-63 36673.0 64-65 38502.0 66-67 41084.0 68-69 42371.0 70-71 43617.0 72-73 38398.0 74-75 37853.0 76-77 38886.0 78-79 40188.0 80-81 39704.0 82-83 37862.0 84-85 37192.0 86-87 38853.0 88-89 40020.0 90-91 40313.0 92-93 39872.0 94-95 47325.0 96-97 151960.0 98-99 333447.0 100-101 3322503.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 87.0490337569399 #Duplication Level Percentage of deduplicated Percentage of total 1 90.8136049765617 79.05236565194126 2 6.706417384626164 11.675743066049032 3 1.4476269950322942 3.78043593474071 4 0.49205465162767126 1.7133152791918584 5 0.21274287196762473 0.9259530721729053 6 0.10184223796211635 0.5319161046147942 7 0.06547458462102289 0.3989649528827928 8 0.041555405700745895 0.289388633090205 9 0.027651930875011117 0.21663664777650704 >10 0.08904330070027011 1.1987311452679157 >50 0.0012145271925895677 0.06794221893409237 >100 7.020409487169429E-4 0.1127012783643252 >500 6.909218412671023E-5 0.03590601497359142 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 2.0080401929325018E-5 0.0 4 0.0 1.0040200964662508E-4 0.0 4.0160803858650036E-5 2.0080401929325018E-5 5 0.0 1.0040200964662508E-4 0.0 4.0160803858650036E-5 2.0080401929325018E-5 6 0.0 1.0040200964662508E-4 0.0 4.0160803858650036E-5 2.0080401929325018E-5 7 0.0 1.0040200964662508E-4 0.0 4.0160803858650036E-5 2.0080401929325018E-5 8 0.0 1.0040200964662508E-4 0.0 4.0160803858650036E-5 2.0080401929325018E-5 9 0.0 1.8072361736392516E-4 0.0 1.4056281350527513E-4 2.0080401929325018E-5 10-11 0.0 1.8072361736392516E-4 0.0 1.5060301446993764E-4 2.0080401929325018E-5 12-13 0.0 1.8072361736392516E-4 0.0 2.0080401929325017E-4 2.0080401929325018E-5 14-15 0.0 2.1084422025791267E-4 0.0 2.0080401929325017E-4 3.0120602893987527E-5 16-17 0.0 2.2088442122257518E-4 0.0 2.2088442122257518E-4 4.0160803858650036E-5 18-19 0.0 2.6104522508122526E-4 0.0 2.3092462218723768E-4 4.0160803858650036E-5 20-21 0.0 3.012060289398753E-4 0.0 2.610452250812252E-4 5.020100482331254E-5 22-23 2.0080401929325018E-5 3.313266318338628E-4 0.0 2.8112562701055027E-4 7.028140675263757E-5 24-25 2.0080401929325018E-5 3.413668327985253E-4 0.0 2.911658279752128E-4 8.032160771730007E-5 26-27 2.0080401929325018E-5 3.413668327985253E-4 0.0 3.413668327985253E-4 1.0040200964662508E-4 28-29 2.0080401929325018E-5 3.413668327985253E-4 0.0 4.1164823955116284E-4 1.0040200964662508E-4 30-31 2.0080401929325018E-5 3.614472347278503E-4 0.0 0.0010943819051482135 1.0040200964662508E-4 32-33 2.0080401929325018E-5 3.614472347278503E-4 0.0 0.0028714974758934776 1.2048241157595011E-4 34-35 2.0080401929325018E-5 4.0160803858650034E-4 0.0 0.004919698472684629 1.2048241157595011E-4 36-37 2.0080401929325018E-5 4.4176884244515036E-4 0.0 0.008142602982341294 1.2048241157595011E-4 38-39 2.0080401929325018E-5 4.4176884244515036E-4 0.0 0.013072341655990586 1.2048241157595011E-4 40-41 2.0080401929325018E-5 5.421708520917754E-4 0.0 0.01884545721067153 1.4056281350527513E-4 42-43 2.0080401929325018E-5 5.421708520917754E-4 0.0 0.024478009951847197 1.4056281350527513E-4 44-45 2.0080401929325018E-5 6.224924598090755E-4 0.0 0.03086357776537255 1.5060301446993764E-4 46-47 2.0080401929325018E-5 7.028140675263756E-4 0.0 0.03781139683291901 1.6064321543460015E-4 48-49 2.0080401929325018E-5 7.028140675263756E-4 0.0 0.044648773689854176 2.0080401929325017E-4 50-51 2.0080401929325018E-5 8.132562781376631E-4 0.0 0.050873698287944934 2.0080401929325017E-4 52-53 2.0080401929325018E-5 8.232964791023257E-4 0.0 0.057239185699540965 2.1084422025791267E-4 54-55 2.0080401929325018E-5 8.232964791023257E-4 0.0 0.06350427110149037 2.2088442122257518E-4 56-57 2.0080401929325018E-5 8.232964791023257E-4 0.0 0.06844404997610432 2.2088442122257518E-4 58-59 2.0080401929325018E-5 8.232964791023257E-4 0.0 0.07430752733946723 2.2088442122257518E-4 60-61 2.0080401929325018E-5 8.634572829609757E-4 0.0 0.07952843184109173 2.2088442122257518E-4 62-63 2.0080401929325018E-5 8.734974839256383E-4 0.0 0.08472925594078691 2.2088442122257518E-4 64-65 2.0080401929325018E-5 0.0010542211012895633 0.0 0.08977947702601216 2.2088442122257518E-4 66-67 2.0080401929325018E-5 0.0010843417041835508 0.0 0.09500038152763665 2.2088442122257518E-4 68-69 2.0080401929325018E-5 0.001124502508042201 0.0 0.09960883377041675 2.2088442122257518E-4 70-71 2.0080401929325018E-5 0.001124502508042201 0.0 0.10387591918039832 2.610452250812252E-4 72-73 2.0080401929325018E-5 0.001124502508042201 0.0 0.10740002971899486 3.212864308692003E-4 74-75 2.0080401929325018E-5 0.0011646633119008509 0.0 0.10999040156787779 3.212864308692003E-4 76-77 2.0080401929325018E-5 0.001265065321547476 0.0 0.11256069301483138 3.212864308692003E-4 78-79 2.0080401929325018E-5 0.001305226125406126 0.0 0.11454865280583457 3.212864308692003E-4 80-81 2.0080401929325018E-5 0.001305226125406126 0.0 0.11504062265310303 3.413668327985253E-4 82-83 2.0080401929325018E-5 0.001305226125406126 0.0 0.11553259250037148 3.614472347278503E-4 84-85 2.0080401929325018E-5 0.001305226125406126 0.0 0.11572335631870007 3.614472347278503E-4 86-87 2.0080401929325018E-5 0.001305226125406126 0.0 0.11588399953413467 3.614472347278503E-4 88 2.0080401929325018E-5 0.001345386929264776 0.0 0.11588399953413467 3.614472347278503E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 5340 0.0 47.519653 1 GTATCAA 10075 0.0 38.800976 1 TCAACGC 11895 0.0 32.287647 4 ATCAACG 11880 0.0 32.256252 3 CAACGCA 12055 0.0 31.859108 5 AACGCAG 12480 0.0 30.942787 6 TATCAAC 12840 0.0 30.34532 2 ACGCAGA 14270 0.0 26.971012 7 CGCAGAG 14485 0.0 26.570684 8 GCAGAGT 17380 0.0 22.144783 9 AGAGTAC 15550 0.0 19.44516 10-11 TACATGG 12485 0.0 19.432146 2 GAGTACT 10315 0.0 19.424831 12-13 GTACATG 12860 0.0 19.365469 1 CTTATAC 3095 0.0 19.250721 1 CAGAGTA 16915 0.0 18.674131 10-11 ACATGGG 12670 0.0 18.505617 3 GTGGTAT 2795 0.0 18.096436 1 AGTACTT 11425 0.0 16.974901 12-13 GTACTTT 11955 0.0 16.92144 14-15 >>END_MODULE