##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138851_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 8305307 Sequences flagged as poor quality 0 Sequence length 19-101 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.94219695912505 34.0 31.0 34.0 31.0 34.0 2 33.05138786561412 34.0 33.0 34.0 31.0 34.0 3 33.110523066757196 34.0 33.0 34.0 31.0 34.0 4 36.472434191776415 37.0 37.0 37.0 35.0 37.0 5 36.439982411246206 37.0 37.0 37.0 35.0 37.0 6 36.47292773162991 37.0 37.0 37.0 35.0 37.0 7 36.43291741051836 37.0 37.0 37.0 35.0 37.0 8 36.41852889965416 37.0 37.0 37.0 35.0 37.0 9 38.20767697088139 39.0 39.0 39.0 37.0 39.0 10-11 38.16742788677168 39.0 39.0 39.0 37.0 39.0 12-13 38.137066998245814 39.0 39.0 39.0 37.0 39.0 14-15 39.59098760587658 41.0 40.0 41.0 37.0 41.0 16-17 39.572055554358194 41.0 40.0 41.0 37.0 41.0 18-19 39.598983637811344 41.0 40.0 41.0 37.0 41.0 20-21 39.586673149845424 41.0 40.0 41.0 37.0 41.0 22-23 39.5094129932807 41.0 39.0 41.0 37.0 41.0 24-25 39.35487226639224 41.0 39.0 41.0 36.0 41.0 26-27 39.35719912372025 41.0 39.0 41.0 36.0 41.0 28-29 39.27703888102014 41.0 39.0 41.0 36.0 41.0 30-31 39.17922034483285 41.0 39.0 41.0 36.0 41.0 32-33 38.97147187687526 40.0 39.0 41.0 35.0 41.0 34-35 38.88930399054959 40.0 38.5 41.0 35.0 41.0 36-37 39.07514039958336 40.5 39.0 41.0 35.0 41.0 38-39 39.14198962627407 41.0 39.0 41.0 35.0 41.0 40-41 39.128095622375895 41.0 39.0 41.0 35.0 41.0 42-43 38.98989685576825 41.0 39.0 41.0 35.0 41.0 44-45 39.01582998270346 41.0 39.0 41.0 35.0 41.0 46-47 38.971041855128675 40.0 39.0 41.0 35.0 41.0 48-49 38.91593825912672 40.0 39.0 41.0 35.0 41.0 50-51 38.845859419100954 40.0 38.5 41.0 35.0 41.0 52-53 38.737512872942546 40.0 38.0 41.0 35.0 41.0 54-55 38.61763324083705 40.0 38.0 41.0 35.0 41.0 56-57 38.47766309278376 40.0 38.0 41.0 34.0 41.0 58-59 38.32293568507703 40.0 37.0 41.0 34.0 41.0 60-61 38.153824762497294 40.0 37.0 41.0 34.0 41.0 62-63 37.94277512857749 39.5 36.0 41.0 34.0 41.0 64-65 37.690618280934515 39.0 36.0 41.0 33.5 41.0 66-67 37.389516201558436 39.0 35.0 40.5 33.0 41.0 68-69 37.076449898681005 38.0 35.0 40.0 33.0 41.0 70-71 36.73271366257855 37.5 35.0 40.0 33.0 41.0 72-73 36.40142388098393 37.0 35.0 39.5 32.0 41.0 74-75 36.062772505851974 36.5 35.0 39.0 32.0 41.0 76-77 35.19510329357984 35.5 34.0 38.0 31.0 39.0 78-79 35.40686430484364 35.5 34.5 37.5 32.0 39.0 80-81 35.18031179828831 35.0 34.5 37.0 32.0 39.0 82-83 34.90089136229909 35.0 34.0 37.0 32.0 39.0 84-85 34.62846694824944 35.0 34.0 36.0 31.0 37.5 86-87 34.400111560003936 35.0 34.0 36.0 31.0 37.0 88-89 34.19131992875986 35.0 34.0 35.5 31.0 37.0 90-91 33.98481199824641 35.0 34.0 35.0 31.0 36.0 92-93 33.846290379328195 35.0 34.0 35.0 31.0 36.0 94-95 33.76409956636812 35.0 34.0 35.0 31.0 36.0 96-97 33.7312170927288 35.0 34.0 35.0 31.0 36.0 98-99 33.746094672159856 35.0 34.0 35.0 31.0 35.0 100-101 32.36719978439734 34.0 31.5 35.0 27.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 1.0 14 0.0 15 0.0 16 0.0 17 0.0 18 3.0 19 6.0 20 22.0 21 119.0 22 634.0 23 2104.0 24 5586.0 25 11594.0 26 20540.0 27 33477.0 28 49783.0 29 67688.0 30 89105.0 31 114783.0 32 147221.0 33 196903.0 34 286446.0 35 431467.0 36 762512.0 37 1731417.0 38 2734395.0 39 1527866.0 40 91634.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.16827858820356 21.37224340346321 15.683927321151964 23.775550687181266 2 13.368411696181406 21.772440532912974 42.095577076686936 22.763570694218682 3 16.6440124715468 27.12941908816112 31.639981915173493 24.586586525118584 4 11.481769784493165 19.33261933186078 39.471109128442606 29.714501755203454 5 12.586967004824027 38.32587725556135 35.788113741759034 13.299041997855587 6 28.412137975409934 38.98304288848598 19.232704971978155 13.372114164125923 7 25.512546082008818 33.61759752986707 23.157496259618256 17.712360128505864 8 24.19114745812078 36.801154642730324 21.393905760607172 17.613792138541715 9 25.25246626598925 17.113258717238264 21.503231442982937 36.13104357378955 10-11 23.482854004244157 27.5506147786358 29.010855890748882 19.955675326371157 12-13 24.652503793809416 25.085895385077002 29.21088463141005 21.050716189703536 14-15 21.761464412457986 26.427432676834776 27.228141008710683 24.58296190199655 16-17 20.896359561969152 29.751030832038627 27.81706223810792 21.5355473678843 18-19 20.867109427743006 28.482800214368957 30.04190573569406 20.608184622193978 20-21 21.97027789258344 27.420310237176626 29.974018968470872 20.635392901769066 22-23 21.568132201796026 27.573096681149156 29.801476820317625 21.05729429673719 24-25 21.347229105606946 27.765682424616152 29.874352719286573 21.012735750490336 26-27 21.265364514834314 27.96040768567038 29.81829534449974 20.955932454995562 28-29 21.03009850159268 27.99844105854205 29.86284048033584 21.108619959529435 30-31 21.565529872054086 27.736069099279582 29.813751856824926 20.884649171841403 32-33 21.14947861685763 27.97947068853611 29.754264498488013 21.116786196118248 34-35 21.269637767127442 28.06888354852935 29.82077858990485 20.840700094438358 36-37 21.151600609352077 28.018515744042638 29.73668851886294 21.09319512774234 38-39 21.069186917361066 27.866396848690062 29.868331710941554 21.196084523007322 40-41 21.328434567964543 27.7911288700156 29.739425441857804 21.141011120162048 42-43 21.43428296466126 27.817615764173027 29.50107173990823 21.24702953125749 44-45 21.364822152535396 28.122541606379027 29.211887746259045 21.300748494826532 46-47 21.549484397254854 27.993108455968592 28.78787216898705 21.669534977789503 48-49 21.4736540486711 28.14325857877978 28.732573091878482 21.650514280670638 50-51 21.422176555840732 28.28740680919043 28.64164819159129 21.64876844337755 52-53 21.572157108417315 28.261967097431757 28.61383134523845 21.55204444891248 54-55 21.596111009466252 28.250869063539803 28.45734865240761 21.695671274586335 56-57 21.713073052220565 28.45203366374063 28.200216511729042 21.634676772309763 58-59 21.499370645049808 28.61747049861158 28.467717765682554 21.415441090656056 60-61 21.718994808095523 28.674360555659838 28.196743841793943 21.4099007944507 62-63 21.525945038946677 28.822172422212766 28.162702268202146 21.48918027063841 64-65 21.524736056011477 28.737588055323897 28.173925647740035 21.56375024092459 66-67 21.65606883297143 28.60365155387306 28.08206238334552 21.65821722980999 68-69 21.68832154418616 28.479334206503143 28.162564307863203 21.669779941447498 70-71 21.65945131210898 28.303741530070507 28.24760689757217 21.78920026024834 72-73 21.701447404134917 28.28375180041794 28.247352065852926 21.76744872959422 74-75 21.631628349901057 28.337091798660374 28.206747658232782 21.82453219320578 76-77 21.680254343649143 28.298208586539342 28.124053813598938 21.897483256212574 78-79 21.691857143004373 28.326046138346133 28.10480957813774 21.877287140511754 80-81 21.71653623223777 28.296128219613202 28.14168441078898 21.845651137360043 82-83 21.756909443784135 28.251433041960674 28.218281252350792 21.773376261904403 84-85 21.836667980385016 28.21864734357557 28.15594473014798 21.78873994589143 86-87 21.70952702884049 28.23469888646396 28.190987077100356 21.864787007595197 88-89 21.800844397066495 28.130343250738793 28.17604691911198 21.89276543308273 90-91 21.775703588032794 28.15032749326677 28.264597208913493 21.809371709786944 92-93 21.826293183196363 28.04252814288289 28.274049563533648 21.8571291103871 94-95 21.70128085848802 28.133398637922042 28.275195852888046 21.890124650701893 96-97 21.678925273712228 28.13630348478165 28.336455808712863 21.84831543279326 98-99 21.883634571498977 28.678007649699477 28.350574798847187 21.08778297995436 100-101 19.69685026370999 32.45699697318262 26.598047436565185 21.248105326542206 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2519.0 1 2137.0 2 2647.0 3 3748.5 4 4943.5 5 7396.5 6 9572.0 7 11941.5 8 14154.0 9 14700.5 10 13429.5 11 12330.0 12 14112.5 13 19393.5 14 31764.5 15 48404.0 16 61426.5 17 67764.0 18 67135.0 19 61889.0 20 54615.0 21 47301.0 22 43218.0 23 44723.0 24 51997.0 25 64281.0 26 80511.0 27 99486.5 28 119360.5 29 139696.5 30 159698.0 31 179608.5 32 201021.5 33 222588.0 34 242922.5 35 260802.0 36 278150.0 37 292432.5 38 302060.0 39 310936.5 40 320248.0 41 327638.0 42 330288.0 43 332685.5 44 336441.5 45 341146.0 46 346446.0 47 346802.5 48 337314.5 49 324732.5 50 313327.5 51 297443.0 52 278347.0 53 259757.5 54 241613.0 55 222919.5 56 202164.5 57 179492.0 58 156561.0 59 134980.0 60 113661.0 61 91913.0 62 71937.5 63 55166.0 64 41496.5 65 30723.0 66 22869.5 67 17014.5 68 12516.0 69 8769.0 70 5993.0 71 4212.0 72 2945.0 73 2035.5 74 1418.5 75 973.5 76 608.0 77 385.0 78 246.5 79 161.0 80 111.0 81 73.0 82 52.0 83 39.0 84 31.0 85 21.5 86 15.5 87 12.0 88 6.5 89 2.0 90 0.5 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 2.408098821632963E-5 2 0.03085978639922642 3 2.408098821632963E-5 4 2.408098821632963E-5 5 2.408098821632963E-5 6 1.2040494108164814E-5 7 6.020247054082408E-5 8 6.501866818409E-4 9 4.695792702184278E-4 10-11 6.020247054082407E-6 12-13 6.020247054082407E-6 14-15 0.0019324993043604527 16-17 1.8060741162247223E-5 18-19 0.0 20-21 1.9265239421472084E-4 22-23 0.002022984109881272 24-25 7.105810577878238E-4 26-27 0.014848557662912923 28-29 0.31555977852895273 30-31 0.3169849126404424 32-33 0.3343382162662855 34-35 0.21605193541447215 36-37 0.07187977045963052 38-39 0.06331373083245831 40-41 0.026595121927172748 42-43 0.01014158119043295 44-45 0.013816302673479618 46-47 0.010046468239106704 48-49 0.0072332725934563125 50-51 0.0076262546785814305 52-53 0.003420270630539245 54-55 0.001258166945123476 56-57 0.00375378649995625 58-59 0.004388019346763963 60-61 0.0030487821293178965 62-63 0.0018269983354618881 64-65 6.376618735520618E-4 66-67 0.007608903997668266 68-69 0.011329695685915332 70-71 0.011510203873601256 72-73 0.010028221975515414 74-75 0.010296862812161989 76-77 0.00932663787601561 78-79 0.002701614615926467 80-81 0.0022471084104803353 82-83 0.0018580303809782222 84-85 3.041600502350739E-5 86-87 0.0027838202827146366 88-89 0.0 90-91 0.008729762742082354 92-93 0.018314225890861128 94-95 0.0013311828777414047 96-97 0.0 98-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 119.0 20-21 415.0 22-23 1037.0 24-25 2550.0 26-27 3829.0 28-29 7088.0 30-31 15947.0 32-33 21327.0 34-35 30665.0 36-37 43075.0 38-39 51729.0 40-41 55855.0 42-43 68234.0 44-45 83732.0 46-47 83192.0 48-49 71243.0 50-51 61401.0 52-53 58436.0 54-55 62704.0 56-57 67932.0 58-59 68494.0 60-61 67991.0 62-63 68205.0 64-65 73984.0 66-67 80728.0 68-69 74544.0 70-71 69061.0 72-73 65946.0 74-75 66923.0 76-77 68800.0 78-79 72101.0 80-81 73376.0 82-83 71402.0 84-85 72558.0 86-87 76617.0 88-89 82179.0 90-91 88208.0 92-93 89107.0 94-95 100934.0 96-97 157034.0 98-99 702249.0 100-101 5224356.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 86.20926780300661 #Duplication Level Percentage of deduplicated Percentage of total 1 90.04992358960322 77.63137978376389 2 7.126301161081747 12.287064104811469 3 1.6553966541724117 4.281316004392518 4 0.5760437293882458 1.986412325322958 5 0.24839466245743577 1.0706960988315257 6 0.1188014726326566 0.6145072781748153 7 0.07353681243402191 0.4437688329552843 8 0.03959652531353524 0.2730869963858472 9 0.029867403938705777 0.2317362322259215 >10 0.08095115795163887 1.0372150256605963 >50 9.040970534246272E-4 0.051142057265164804 >100 2.2030448083641167E-4 0.04542648966417539 >500 4.1620284328230364E-5 0.02319655716479867 >1k 2.0809207784000594E-5 0.02305221338105822 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 1.2040494108164816E-5 0.0 0.0 0.0 5 0.0 1.2040494108164816E-5 0.0 0.0 0.0 6 0.0 1.2040494108164816E-5 0.0 0.0 1.2040494108164816E-5 7 0.0 1.2040494108164816E-5 0.0 9.632395286531853E-5 1.2040494108164816E-5 8 0.0 2.4080988216329632E-5 0.0 9.632395286531853E-5 1.2040494108164816E-5 9 0.0 7.224296464898889E-5 0.0 1.3244543518981298E-4 4.8161976432659264E-5 10-11 0.0 7.224296464898889E-5 0.0 1.685669175143074E-4 6.020247054082408E-5 12-13 0.0 7.224296464898889E-5 0.0 1.685669175143074E-4 7.224296464898889E-5 14-15 0.0 8.42834587571537E-5 0.0 2.5285037627146114E-4 7.82632117030713E-5 16-17 0.0 8.42834587571537E-5 0.0 2.5887062332554354E-4 8.42834587571537E-5 18-19 0.0 9.030370581123611E-5 0.0 3.130528468122852E-4 8.42834587571537E-5 20-21 0.0 9.632395286531853E-5 0.0 3.431540820826972E-4 8.42834587571537E-5 22-23 0.0 1.0836444697348334E-4 0.0 3.6121482324494444E-4 9.030370581123611E-5 24-25 0.0 1.2040494108164815E-4 0.0 4.4549828200209817E-4 9.632395286531853E-5 26-27 0.0 1.2040494108164815E-4 0.0 5.89984211300076E-4 9.632395286531853E-5 28-29 0.0 1.2642518813573057E-4 0.0 0.0011017052108970805 9.632395286531853E-5 30-31 0.0 1.685669175143074E-4 0.0 0.0024442203039574577 9.632395286531853E-5 32-33 0.0 1.685669175143074E-4 0.0 0.005261695925268024 1.0836444697348334E-4 34-35 0.0 2.167288939469667E-4 0.0 0.00935546392204406 1.0836444697348334E-4 36-37 0.0 2.5285037627146114E-4 0.0 0.015357650234964222 1.1438469402756575E-4 38-39 0.0 2.5285037627146114E-4 0.0 0.023599368452003038 1.3244543518981298E-4 40-41 0.0 2.7091111743370836E-4 0.0 0.032208321739340885 1.4448592929797779E-4 42-43 0.0 3.010123527041204E-4 0.0 0.039914237968566364 1.4448592929797779E-4 44-45 0.0 3.9733630556943887E-4 0.0 0.04923358040828593 1.4448592929797779E-4 46-47 0.0 4.936602584347575E-4 0.0 0.05933555496503621 1.4448592929797779E-4 48-49 0.0 4.936602584347575E-4 0.0 0.06892580852218949 1.505061763520602E-4 50-51 0.0 5.598829760296639E-4 0.0 0.07757690353890591 1.565264234061426E-4 52-53 0.0 5.659032230837463E-4 0.0 0.08528884001518547 1.685669175143074E-4 54-55 0.0 5.719234701378287E-4 0.0 0.09401819824360497 1.8662765867655465E-4 56-57 0.0 5.779437171919111E-4 0.0 0.10046588283852723 1.9866815278471946E-4 58-59 0.0 5.779437171919111E-4 0.0 0.1059503279047963 2.1672889394696668E-4 60-61 0.0 5.960044583541584E-4 0.0 0.11104947715960409 2.2274914100104908E-4 62-63 0.0 6.140651995164056E-4 0.0 0.11594393801457309 2.287693880551315E-4 64-65 0.0 6.863081641653944E-4 0.0 0.12077217615194719 2.287693880551315E-4 66-67 0.0 7.103891523817241E-4 0.0 0.12613621627713462 2.287693880551315E-4 68-69 0.0 7.344701405980538E-4 0.0 0.13121730479078014 2.287693880551315E-4 70-71 0.0 7.344701405980538E-4 0.0 0.1361238061398573 2.347896351092139E-4 72-73 0.0 7.344701405980538E-4 0.0 0.139898501042767 2.5285037627146114E-4 74-75 0.0 7.465106347062186E-4 0.0 0.14295678654624086 2.5285037627146114E-4 76-77 0.0 7.766118699766306E-4 0.0 0.145744160932281 2.5285037627146114E-4 78-79 0.0 7.82632117030713E-4 0.0 0.14819440148329255 2.6489087037962595E-4 80-81 0.0 7.886523640847954E-4 0.0 0.14942855212937944 2.7091111743370836E-4 82-83 0.0 7.946726111388779E-4 0.0 0.14981384794084074 2.7693136448779076E-4 84-85 0.0 8.067131052470427E-4 0.0 0.15015700202292342 2.7693136448779076E-4 86-87 0.0 8.187535993552075E-4 0.0 0.15031352844632956 2.7693136448779076E-4 88-89 0.0 8.669155757878667E-4 0.0 0.15038577141097856 2.8897185859595557E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 13415 0.0 53.870594 1 GTATCAA 25540 0.0 38.996418 1 ATCAACG 31665 0.0 30.999252 3 TCAACGC 31925 0.0 30.773495 4 CAACGCA 32330 0.0 30.361624 5 TATCAAC 32650 0.0 30.230167 2 CTTATAC 7205 0.0 29.705887 1 AACGCAG 33410 0.0 29.380165 6 ACGCAGA 38295 0.0 25.654623 7 CGCAGAG 38525 0.0 25.501461 8 GTGGTAT 6125 0.0 23.66713 1 TATACAC 11365 0.0 23.214426 3 TGGTATC 6025 0.0 22.573889 2 GCAGAGT 43760 0.0 22.403645 9 GAGTACT 24945 0.0 20.513832 12-13 TTATACA 11515 0.0 19.957106 2 CAGAGTA 43050 0.0 19.54529 10-11 GTACATG 32105 0.0 19.30921 1 AGAGTAC 40990 0.0 19.222494 10-11 TACATGG 31965 0.0 19.087 2 >>END_MODULE