##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138850_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7139918 Sequences flagged as poor quality 0 Sequence length 19-101 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.96142056533422 34.0 31.0 34.0 31.0 34.0 2 33.06921424027559 34.0 33.0 34.0 31.0 34.0 3 33.12967795988693 34.0 33.0 34.0 31.0 34.0 4 36.48791512731659 37.0 37.0 37.0 35.0 37.0 5 36.45296864753909 37.0 37.0 37.0 35.0 37.0 6 36.48293677882575 37.0 37.0 37.0 35.0 37.0 7 36.441103665336215 37.0 37.0 37.0 35.0 37.0 8 36.426574927050986 37.0 37.0 37.0 35.0 37.0 9 38.22086234043584 39.0 39.0 39.0 37.0 39.0 10-11 38.17990843872437 39.0 39.0 39.0 37.0 39.0 12-13 38.15127981861977 39.0 39.0 39.0 37.0 39.0 14-15 39.62077393605921 41.0 40.0 41.0 37.0 41.0 16-17 39.60199045703326 41.0 40.0 41.0 37.0 41.0 18-19 39.61605231320584 41.0 40.0 41.0 37.0 41.0 20-21 39.595582676248824 41.0 40.0 41.0 37.0 41.0 22-23 39.52102574335211 41.0 39.5 41.0 37.0 41.0 24-25 39.36861043865134 41.0 39.0 41.0 36.0 41.0 26-27 39.3748282842464 41.0 39.0 41.0 36.5 41.0 28-29 39.29624206091701 41.0 39.0 41.0 36.0 41.0 30-31 39.20567697181241 41.0 39.0 41.0 36.0 41.0 32-33 39.004306281209935 40.5 39.0 41.0 35.0 41.0 34-35 38.926477306381415 40.0 38.5 41.0 35.0 41.0 36-37 39.11712302744282 41.0 39.0 41.0 35.0 41.0 38-39 39.186920414384325 41.0 39.0 41.0 35.0 41.0 40-41 39.16584817424397 41.0 39.0 41.0 35.0 41.0 42-43 39.018673265567486 41.0 39.0 41.0 35.0 41.0 44-45 39.04370938944798 41.0 39.0 41.0 35.0 41.0 46-47 38.99766549844314 40.0 39.0 41.0 35.0 41.0 48-49 38.933437811531064 40.0 39.0 41.0 35.0 41.0 50-51 38.864626224974245 40.0 38.5 41.0 35.0 41.0 52-53 38.751375772751814 40.0 38.0 41.0 35.0 41.0 54-55 38.62078442651763 40.0 38.0 41.0 35.0 41.0 56-57 38.47689176022668 40.0 38.0 41.0 34.5 41.0 58-59 38.31979710013461 40.0 37.0 41.0 34.0 41.0 60-61 38.14023007257313 40.0 37.0 41.0 34.0 41.0 62-63 37.917462297183796 39.5 36.0 41.0 34.0 41.0 64-65 37.649942752929306 39.0 36.0 41.0 33.5 41.0 66-67 37.33678430173664 39.0 35.0 40.5 33.0 41.0 68-69 37.011729896701084 38.0 35.0 40.0 33.0 41.0 70-71 36.65758463527666 37.0 35.0 40.0 32.5 41.0 72-73 36.321818875596705 37.0 35.0 39.0 32.0 41.0 74-75 35.984540040808724 36.0 35.0 39.0 32.0 40.5 76-77 35.12346361299072 35.0 34.0 38.0 31.0 39.0 78-79 35.338963715910054 35.0 34.5 37.0 32.0 39.0 80-81 35.11740610510498 35.0 34.0 37.0 32.0 39.0 82-83 34.84616277072547 35.0 34.0 37.0 31.5 39.0 84-85 34.58022667101747 35.0 34.0 36.0 31.0 37.5 86-87 34.35941175203338 35.0 34.0 36.0 31.0 37.0 88-89 34.15754924946191 35.0 34.0 35.5 31.0 37.0 90-91 33.957255164045165 35.0 34.0 35.0 31.0 36.0 92-93 33.82330195638542 35.0 34.0 35.0 31.0 36.0 94-95 33.74461217348126 35.0 34.0 35.0 31.0 36.0 96-97 33.715784501484926 35.0 34.0 35.0 31.0 36.0 98-99 33.733005753921034 35.0 34.0 35.0 31.0 35.0 100-101 32.35807958262233 34.0 31.5 35.0 27.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 0.0 15 0.0 16 0.0 17 1.0 18 0.0 19 4.0 20 28.0 21 101.0 22 479.0 23 1609.0 24 4279.0 25 9107.0 26 16802.0 27 27650.0 28 40828.0 29 57483.0 30 75945.0 31 98053.0 32 126843.0 33 169953.0 34 245858.0 35 375092.0 36 673694.0 37 1526524.0 38 2344230.0 39 1268593.0 40 76761.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.18677205911497 21.2382720975608 15.610587630080294 23.964368213243937 2 13.572470424959556 21.702298404343924 41.58739850184044 23.137832668856078 3 16.696958802182156 26.70231320616192 31.505184163905547 25.095543827750376 4 11.732629384907415 18.943497522450194 39.4701927207277 29.853680371914688 5 12.808538250514676 38.05906987434168 35.87950672255714 13.252885152586508 6 29.065898104977972 38.75008631052714 18.98897424157732 13.195041342917571 7 25.835507262412406 33.30436473044353 23.30446837314847 17.55565963399559 8 24.339082307091026 36.69638564105322 21.311091512283884 17.653440539571864 9 25.245980990439477 17.077623562633608 21.593329076493013 36.083066370433905 10-11 23.66936847173875 27.293772841648885 29.117162129873197 19.919696556739165 12-13 24.687720503232672 24.79624415854636 29.27506310296561 21.240972235255363 14-15 21.81786400905405 26.21934408028582 27.178566769071615 24.784225141588518 16-17 21.160260798732534 29.432204486553896 27.75906061587314 21.648474098840435 18-19 21.177834255239347 28.379212478350592 29.758948212010278 20.684005054399783 20-21 22.058844538615478 27.457761696243892 29.687958700947707 20.795435064192922 22-23 21.76086455152587 27.39754675156197 29.558666431624562 21.282922265287592 24-25 21.545386515795652 27.566159066154967 29.56936601853521 21.319088399514172 26-27 21.459327476103606 27.728605444887144 29.515320512294906 21.29674656671434 28-29 21.342868958067257 27.81479798803851 29.592445579704847 21.249887474189393 30-31 21.7317240557782 27.625899290705448 29.41794027755053 21.224436375965823 32-33 21.53840259913528 27.793818904773698 29.323031202224243 21.344747293866774 34-35 21.585868468571086 27.83106962330416 29.374868656673808 21.20819325145094 36-37 21.539985130806752 27.801849404612426 29.348195914903446 21.30996954967738 38-39 21.404649191990586 27.858092289505404 29.39147464166113 21.34578387684288 40-41 21.678756412855886 27.761528959633896 29.191822055017397 21.36789257249282 42-43 21.67922163113741 27.861552045385622 28.953552039040726 21.505674284436243 44-45 21.737494423929675 27.988611910231718 28.736850562769554 21.53704310306905 46-47 21.794478019700577 27.961116943244914 28.44331859827208 21.801086438782434 48-49 21.746866143079256 28.115981408429537 28.416116578210026 21.721035870281185 50-51 21.750579643823553 28.22883354769519 28.256930244569787 21.763656563911464 52-53 21.91280186449587 28.138867999060917 28.166515083166686 21.781815053276528 54-55 21.923173629338642 28.054912895071908 28.17388259472536 21.84803088086409 56-57 21.93355500823026 28.198895029313427 28.046427296096187 21.82112266636012 58-59 21.84744144223708 28.28316386432646 28.12158242383566 21.747812269600793 60-61 21.94055967827291 28.249269033394516 28.06881462705533 21.74135666127725 62-63 21.869662210942334 28.33029669833796 28.008761424978534 21.791279665741172 64-65 21.90762238541067 28.284886269659033 27.989298755707843 21.818192589222456 66-67 21.950679699644716 28.267247060571904 27.85208278952631 21.929990450257066 68-69 21.92087570155054 28.210653577792023 27.952135369417476 21.916335351239972 70-71 21.92615396019228 28.029094706370785 27.972119252794155 22.07263208064278 72-73 21.97106224966677 28.070062459022953 27.958542552793524 22.000332738516747 74-75 21.843832654448786 28.190725629579244 27.91704124126335 22.048400474708618 76-77 21.981428728801703 28.121536044858843 27.839755753080457 22.057279473258998 78-79 21.95390538737253 28.15726639554837 27.84911193830732 22.03971627877178 80-81 21.95424966936525 28.093189785625178 27.853024346283117 22.09953619872645 82-83 21.991785038862304 28.07084076652055 27.92746335494007 22.009910839677076 84-85 22.11983898832478 28.014576930631108 27.89183666625875 21.973747414785358 86-87 21.90822774276731 28.004710342800454 28.0162634156977 22.070798498734533 88-89 22.023545298879064 27.96649328334923 27.926558511924565 22.083402905847137 90-91 22.077885272597914 27.93871715199689 27.984368178689202 21.999029396715997 92-93 22.087835253074545 27.84556714579356 27.99318557457705 22.073412026554845 94-95 21.934506347235377 27.8867114331761 28.05157046918297 22.127211750405554 96-97 21.93233836072314 27.923534272101058 28.127963486725942 22.016163880449863 98-99 22.111239733741353 28.49233148829017 28.12978883779924 21.26663994016924 100-101 19.935826492960175 32.20664046322236 26.349454493410985 21.508078550406484 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1748.0 1 1539.0 2 2003.5 3 2814.0 4 3766.0 5 5682.5 6 7303.0 7 9047.0 8 10661.5 9 11011.5 10 10276.5 11 9604.5 12 10767.0 13 14486.5 14 23507.0 15 35648.5 16 45031.5 17 49735.5 18 49782.5 19 46795.5 20 42419.5 21 37912.0 22 35558.5 23 37359.0 24 43353.5 25 53713.5 26 67458.5 27 82843.5 28 100052.0 29 117617.5 30 133337.5 31 149824.0 32 166947.0 33 183789.5 34 200400.5 35 214536.0 36 230200.0 37 244266.5 38 253457.0 39 260520.5 40 268764.0 41 277528.5 42 281378.0 43 284226.5 44 287672.0 45 290744.0 46 291335.5 47 288620.0 48 284132.5 49 277116.5 50 268971.5 51 258039.0 52 243198.0 53 228963.0 54 215801.0 55 200528.0 56 183914.0 57 165405.0 58 145041.0 59 125065.0 60 105668.5 61 86450.5 62 67901.0 63 51952.0 64 38809.5 65 28858.0 66 21983.0 67 16799.0 68 12728.0 69 9074.5 70 6297.5 71 4542.5 72 3227.5 73 2251.0 74 1580.0 75 1058.5 76 645.5 77 410.0 78 283.5 79 190.0 80 129.5 81 82.5 82 53.5 83 34.5 84 26.5 85 18.5 86 10.5 87 9.5 88 9.0 89 6.5 90 4.0 91 2.0 92 0.5 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 1.4005763091396848E-5 2 0.03119083440454078 3 1.4005763091396848E-5 4 1.4005763091396848E-5 5 1.4005763091396848E-5 6 1.4005763091396848E-5 7 5.602305236558739E-5 8 4.902017081988897E-4 9 5.182132343816833E-4 10-11 0.0 12-13 0.0 14-15 0.0017717290310617015 16-17 8.40345785483811E-5 18-19 0.0 20-21 2.1709463372178567E-4 22-23 0.0018069060368940799 24-25 7.355019948215055E-4 26-27 0.014805922593263299 28-29 0.312782756972411 30-31 0.31346857948588347 32-33 0.3310172276911631 34-35 0.2139233732808797 36-37 0.07404316376670174 38-39 0.06577960395312432 40-41 0.025984511541304704 42-43 0.009783162017453825 44-45 0.012970065829627281 46-47 0.009118786734411959 48-49 0.006225560506111388 50-51 0.006978851986320255 52-53 0.002943014360254162 54-55 0.001076705892629372 56-57 0.0032253513225392596 58-59 0.003860789635513716 60-61 0.00262613509444957 62-63 0.00158219482536133 64-65 4.8182222955574965E-4 66-67 0.0077090411746506 68-69 0.01183249152266377 70-71 0.012092613818476865 72-73 0.01037649278973198 74-75 0.010091590079445401 76-77 0.009594303056621265 78-79 0.002650394035094087 80-81 0.002243131390952129 82-83 0.0017496306167775443 84-85 8.709924331661377E-6 86-87 0.002932210722222873 88-89 0.0 90-91 0.008456187203559649 92-93 0.019151035423193505 94-95 0.0014484729427575564 96-97 0.0 98-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 100.0 20-21 383.0 22-23 833.0 24-25 2293.0 26-27 3310.0 28-29 5759.0 30-31 13002.0 32-33 17468.0 34-35 25136.0 36-37 35383.0 38-39 42369.0 40-41 45783.0 42-43 54592.0 44-45 66383.0 46-47 65906.0 48-49 56840.0 50-51 49712.0 52-53 47935.0 54-55 51322.0 56-57 53757.0 58-59 53183.0 60-61 52077.0 62-63 52559.0 64-65 56695.0 66-67 60522.0 68-69 59588.0 70-71 57662.0 72-73 55622.0 74-75 56750.0 76-77 58132.0 78-79 60979.0 80-81 61608.0 82-83 60623.0 84-85 61394.0 86-87 65219.0 88-89 70456.0 90-91 75445.0 92-93 76967.0 94-95 86940.0 96-97 136540.0 98-99 616435.0 100-101 4566256.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 86.06474737083943 #Duplication Level Percentage of deduplicated Percentage of total 1 89.99459802222533 77.4536234352307 2 7.155949922814149 12.317500446107553 3 1.6631449471421744 4.294144491506381 4 0.5718061020053037 1.968493908567636 5 0.25041403332308165 1.0775910258031993 6 0.12389574473536542 0.639783358258274 7 0.07534945435896723 0.4539452227754577 8 0.04658969717545033 0.3207784413991234 9 0.030268921138211387 0.23445783458532224 >10 0.08650651842741792 1.0985373076717726 >50 0.0012005172108442911 0.06479842037077203 >100 2.0258083230450963E-4 0.03609320190274784 >500 7.353861137775308E-5 0.04025290582105701 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.4005763091396848E-5 2 1.4005763091396848E-5 1.4005763091396848E-5 0.0 0.0 1.4005763091396848E-5 3 1.4005763091396848E-5 1.4005763091396848E-5 0.0 1.4005763091396848E-5 1.4005763091396848E-5 4 1.4005763091396848E-5 4.201728927419055E-5 0.0 1.4005763091396848E-5 1.4005763091396848E-5 5 2.8011526182793697E-5 4.201728927419055E-5 0.0 1.4005763091396848E-5 1.4005763091396848E-5 6 4.201728927419055E-5 4.201728927419055E-5 0.0 1.4005763091396848E-5 5.602305236558739E-5 7 4.201728927419055E-5 4.201728927419055E-5 0.0 2.8011526182793697E-5 5.602305236558739E-5 8 4.201728927419055E-5 8.40345785483811E-5 0.0 2.8011526182793697E-5 7.002881545698423E-5 9 4.201728927419055E-5 1.8207492018815902E-4 0.0 4.201728927419055E-5 7.002881545698423E-5 10-11 7.703169700268266E-5 1.8207492018815902E-4 0.0 4.201728927419055E-5 7.002881545698423E-5 12-13 9.804034163977794E-5 1.8207492018815902E-4 0.0 5.602305236558739E-5 7.002881545698423E-5 14-15 9.804034163977794E-5 2.1708932791665114E-4 0.0 7.002881545698423E-5 1.0504322318547637E-4 16-17 1.2605186782257163E-4 2.31095091008048E-4 0.0 7.002881545698423E-5 1.3305474936827004E-4 18-19 1.2605186782257163E-4 2.4510085409944486E-4 0.0 7.002881545698423E-5 1.4005763091396847E-4 20-21 1.4005763091396847E-4 2.5210373564514327E-4 0.0 8.40345785483811E-5 1.470605124596669E-4 22-23 1.470605124596669E-4 2.7311238028223853E-4 0.0 8.40345785483811E-5 1.6806915709676216E-4 24-25 1.6806915709676216E-4 3.9216136655911176E-4 0.0 1.8207492018815902E-4 1.8907780173385745E-4 26-27 1.8207492018815902E-4 4.201728927419054E-4 0.0 3.291354326478259E-4 1.9608068327955588E-4 28-29 1.8207492018815902E-4 4.271757742876039E-4 0.0 8.193371408467156E-4 1.9608068327955588E-4 30-31 1.8207492018815902E-4 5.182132343816833E-4 0.0 0.0020378385297982415 1.9608068327955588E-4 32-33 2.5210373564514327E-4 5.462247605644771E-4 0.0 0.004544870123158277 1.9608068327955588E-4 34-35 2.80115261827937E-4 6.722766283870487E-4 0.0 0.008774610576760124 1.9608068327955588E-4 36-37 3.0812678801073065E-4 8.053313777553188E-4 0.0 0.014853111758426357 1.9608068327955588E-4 38-39 3.0812678801073065E-4 8.473486670295093E-4 0.0 0.023137520626987595 2.0308356482525428E-4 40-41 3.0812678801073065E-4 9.874062979434777E-4 0.0 0.031582995771099895 2.100864463709527E-4 42-43 3.0812678801073065E-4 0.001008414942580573 0.0 0.03957328361474179 2.100864463709527E-4 44-45 3.151296695564291E-4 0.0010714408764918588 0.0 0.0488941189520664 2.1708932791665114E-4 46-47 3.361383141935243E-4 0.0011204610473117477 0.0 0.05856509836667592 2.2409220946234957E-4 48-49 3.501440772849212E-4 0.0011204610473117477 0.0 0.06771086166535806 2.941210249193338E-4 50-51 3.6414984037631804E-4 0.0012675215597714147 0.0 0.07610731663865047 3.0812678801073065E-4 52-53 3.6414984037631804E-4 0.0013305474936827005 0.0 0.08431469381020903 3.221325511021275E-4 54-55 3.6414984037631804E-4 0.0013445532567740973 0.0 0.09277417471741273 3.431411957392228E-4 56-57 3.6414984037631804E-4 0.0013585590198654943 0.0 0.09891570183299024 3.7115272192201644E-4 58-59 3.6414984037631804E-4 0.0013585590198654943 0.0 0.10397878519053019 3.781556034677149E-4 60-61 3.6414984037631804E-4 0.0013935734275939862 0.0 0.10906988007425296 3.781556034677149E-4 62-63 3.6414984037631804E-4 0.0014285878353224785 0.0 0.11363575884204832 3.9216136655911176E-4 64-65 3.6414984037631804E-4 0.0016246685186020343 0.0 0.11836970676694046 3.9216136655911176E-4 66-67 3.9216136655911176E-4 0.001652680044784828 0.0 0.12360786216312289 3.9216136655911176E-4 68-69 3.9216136655911176E-4 0.0016946973340590185 0.0 0.12881100315157681 4.201728927419054E-4 70-71 3.9216136655911176E-4 0.0017087030971504155 0.0 0.1336429914181087 4.341786558333023E-4 72-73 3.9216136655911176E-4 0.0017227088602418123 0.0 0.1372564782956891 5.042074712902865E-4 74-75 3.9216136655911176E-4 0.0017647261495160028 0.0 0.14028172312343085 5.042074712902865E-4 76-77 3.9216136655911176E-4 0.0018277520834272887 0.0 0.14326495066189837 5.042074712902865E-4 78-79 3.9216136655911176E-4 0.001848760728064384 0.0 0.14575797649216699 5.042074712902865E-4 80-81 3.9216136655911176E-4 0.001848760728064384 0.0 0.1470605124596669 5.462247605644771E-4 82-83 3.9216136655911176E-4 0.001848760728064384 0.0 0.1475367084047744 5.882420498386676E-4 84-85 3.9216136655911176E-4 0.0018627664911557808 0.0 0.14783783231123943 5.882420498386676E-4 86-87 3.9216136655911176E-4 0.0018767722542471776 0.0 0.1479568812975163 5.882420498386676E-4 88-89 3.9216136655911176E-4 0.0019888183589783525 0.0 0.1480129043498819 5.882420498386676E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 10135 0.0 53.3108 1 GTATCAA 18670 0.0 38.68593 1 TCAACGC 23755 0.0 30.014917 4 ATCAACG 23770 0.0 30.01402 3 CAACGCA 24540 0.0 29.0373 5 TATCAAC 24790 0.0 28.910337 2 AACGCAG 24910 0.0 28.640438 6 ACGCAGA 28280 0.0 25.212315 7 CGCAGAG 28830 0.0 24.761093 8 GCAGAGT 32915 0.0 21.611061 9 GAGTACT 19650 0.0 20.294073 12-13 AGAGTAC 29890 0.0 19.8293 10-11 TACATGG 21650 0.0 19.643957 2 GTACATG 22270 0.0 19.57883 1 GTGGTAT 4850 0.0 19.555267 1 CAGAGTA 32405 0.0 19.111168 10-11 TGGTATC 4905 0.0 18.548555 2 ACATGGG 22225 0.0 18.530647 3 AGTACTT 21295 0.0 18.44434 12-13 GTACTTT 21850 0.0 18.172832 14-15 >>END_MODULE