##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138844_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 10927282 Sequences flagged as poor quality 0 Sequence length 19-101 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.93395777650838 34.0 31.0 34.0 31.0 34.0 2 33.04460102704405 34.0 33.0 34.0 31.0 34.0 3 33.10442917095029 34.0 33.0 34.0 31.0 34.0 4 36.4727520530723 37.0 37.0 37.0 35.0 37.0 5 36.432281421857695 37.0 37.0 37.0 35.0 37.0 6 36.46269182034471 37.0 37.0 37.0 35.0 37.0 7 36.4194426390753 37.0 37.0 37.0 35.0 37.0 8 36.40339683738372 37.0 37.0 37.0 35.0 37.0 9 38.191156135624574 39.0 39.0 39.0 37.0 39.0 10-11 38.14411012729423 39.0 39.0 39.0 37.0 39.0 12-13 38.11691910211523 39.0 39.0 39.0 37.0 39.0 14-15 39.579249990985865 41.0 40.0 41.0 37.0 41.0 16-17 39.55595879194844 41.0 40.0 41.0 37.0 41.0 18-19 39.56307250055412 41.0 40.0 41.0 37.0 41.0 20-21 39.53807614656593 41.0 39.5 41.0 37.0 41.0 22-23 39.45835178456274 41.0 39.0 41.0 36.5 41.0 24-25 39.30131186695364 41.0 39.0 41.0 36.0 41.0 26-27 39.30483316779086 40.5 39.0 41.0 36.0 41.0 28-29 39.23108295660449 41.0 39.0 41.0 36.0 41.0 30-31 39.14475463899363 41.0 39.0 41.0 36.0 41.0 32-33 38.94820150105637 40.0 39.0 41.0 35.0 41.0 34-35 38.86697592827008 40.0 38.0 41.0 35.0 41.0 36-37 39.06147419478168 40.5 39.0 41.0 35.0 41.0 38-39 39.133807775878495 41.0 39.0 41.0 35.0 41.0 40-41 39.10918896244177 41.0 39.0 41.0 35.0 41.0 42-43 38.96026434237874 40.5 39.0 41.0 35.0 41.0 44-45 38.978121793581366 40.0 39.0 41.0 35.0 41.0 46-47 38.9250783074784 40.0 38.0 41.0 35.0 41.0 48-49 38.851572909025776 40.0 38.0 41.0 35.0 41.0 50-51 38.77084376686831 40.0 38.0 41.0 35.0 41.0 52-53 38.64666119022786 40.0 38.0 41.0 35.0 41.0 54-55 38.49822238406263 40.0 38.0 41.0 34.5 41.0 56-57 38.34078486546372 40.0 37.0 41.0 34.0 41.0 58-59 38.16915414380992 40.0 37.0 41.0 34.0 41.0 60-61 37.974983607695556 39.5 36.5 41.0 34.0 41.0 62-63 37.7310248714345 39.0 36.0 41.0 34.0 41.0 64-65 37.44509799294885 39.0 35.5 40.5 33.0 41.0 66-67 37.11280814060096 38.0 35.0 40.0 33.0 41.0 68-69 36.77113752776093 37.5 35.0 40.0 33.0 41.0 70-71 36.407168331930954 37.0 35.0 39.5 32.0 41.0 72-73 36.06562386909432 36.5 35.0 39.0 32.0 41.0 74-75 35.725351119193164 36.0 35.0 39.0 32.0 40.0 76-77 34.8797637906484 35.0 34.0 37.0 30.5 39.0 78-79 35.10726377551403 35.0 34.0 37.0 31.0 39.0 80-81 34.90234463348153 35.0 34.0 37.0 31.0 39.0 82-83 34.65124487943149 35.0 34.0 36.0 31.0 38.5 84-85 34.40668432780251 35.0 34.0 36.0 31.0 37.0 86-87 34.20580872053951 35.0 34.0 35.5 31.0 37.0 88-89 34.02055469518581 35.0 34.0 35.0 31.0 36.5 90-91 33.837713082614826 35.0 34.0 35.0 31.0 36.0 92-93 33.71467172804981 35.0 34.0 35.0 31.0 36.0 94-95 33.646804927996385 35.0 34.0 35.0 31.0 36.0 96-97 33.62693687405742 35.0 34.0 35.0 31.0 35.0 98-99 33.65460664762128 35.0 34.0 35.0 31.0 35.0 100-101 32.25801610703092 34.0 31.5 35.0 27.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 7.0 20 27.0 21 174.0 22 846.0 23 2891.0 24 7741.0 25 16186.0 26 29138.0 27 46974.0 28 68006.0 29 93111.0 30 122606.0 31 156502.0 32 200913.0 33 268977.0 34 392477.0 35 607098.0 36 1118786.0 37 2488227.0 38 3502006.0 39 1706227.0 40 98360.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.3107911006598 20.935608690248866 15.53507999519002 24.218520213901314 2 13.813114414944694 21.345439998681805 41.07801988463943 23.76342570173407 3 16.909191141950945 26.315995139504956 31.076721548871898 25.698092169672204 4 12.08868774504035 18.567554127366716 38.63315690031611 30.71060122727683 5 13.332089352137155 37.71117099384824 35.34049912869458 13.61624052532002 6 29.994714147580343 37.91110177260914 18.616312821431716 13.477871258378798 7 26.61407349956874 32.840447412552535 22.804697419988056 17.74078166789067 8 24.900802566220545 36.23270119201647 20.83272399749689 18.033772244266096 9 25.60678488820355 16.918064741963306 21.13911812010826 36.33603224972489 10-11 24.24421278777284 26.85369518238845 28.573084322341092 20.32900770749762 12-13 25.11016005627017 24.40783078536822 28.745931513435817 21.736077644925793 14-15 22.327692708461313 25.733093397090595 26.481409311069175 25.457804583378916 16-17 21.758316960699915 28.924886058093698 27.107397916718334 22.209399064488057 18-19 21.820741882565127 27.955565711583176 28.986078148253153 21.23761425759855 20-21 22.698717760112178 27.026918567807854 28.928280161506194 21.346083510573774 22-23 22.444744450534362 26.92057426480114 28.74942414130528 21.88525714335922 24-25 22.21013517014214 27.130559568469053 28.75399997107407 21.90530529031474 26-27 22.08159632387925 27.24165623053026 28.780224559739732 21.89652288585076 28-29 22.03029938785885 27.249548879946744 28.800137366929235 21.92001436526517 30-31 22.26114742700911 27.142660341467824 28.69363730594734 21.902554925575725 32-33 22.14381645001356 27.318669629134824 28.562745849003825 21.974768071847798 34-35 22.22277209188439 27.323613904892685 28.631743059489473 21.821870943733455 36-37 22.24259101397524 27.20724798248074 28.542179781583123 22.0079812219609 38-39 22.10780832619652 27.350901062352495 28.601988333216095 21.939302278234894 40-41 22.303475775632265 27.253629634800696 28.447314949649936 21.995579639917096 42-43 22.260202794875944 27.345984052492405 28.246737298004003 22.147075854627644 44-45 22.29688163495755 27.475214808476046 28.055330793678472 22.172572762887928 46-47 22.4227552356567 27.445869609439445 27.75727418708386 22.37410096781999 48-49 22.345547393941892 27.569080155828374 27.68316336034443 22.402209089885304 50-51 22.337816603907903 27.681219830520114 27.59832694036981 22.38263662520217 52-53 22.56341019533757 27.56174005129244 27.46637625126907 22.40847350210092 54-55 22.538951115778044 27.520129618290053 27.480925589258188 22.45999367667372 56-57 22.50772229067302 27.64113615526656 27.436738278426304 22.41440327563412 58-59 22.43075306424546 27.68513984222954 27.478425139951867 22.40568195357313 60-61 22.525560168327207 27.673907178487084 27.438316622451293 22.362216030734412 62-63 22.526462270833576 27.75439749921651 27.357578430067786 22.361561799882125 64-65 22.508520110697287 27.68628122275711 27.336108769677363 22.469089896868248 66-67 22.553307591037573 27.699028127630175 27.226107301257347 22.521556980074905 68-69 22.489465783479073 27.64481267255225 27.338575072695015 22.52714647127366 70-71 22.468600314357065 27.550119992185568 27.362260073898064 22.6190196195593 72-73 22.530806128985084 27.56073675586597 27.273675757635363 22.634781357513585 74-75 22.411789743519776 27.68663373894317 27.260535529655737 22.64104098788132 76-77 22.529882630046956 27.598453425764248 27.236735301408643 22.634928642780157 78-79 22.48207884270866 27.600123260577398 27.18128122546813 22.736516671245813 80-81 22.484833640324744 27.639387177299717 27.191130147525676 22.684649034849862 82-83 22.53229612351228 27.598853584236455 27.27142073123326 22.597429561018007 84-85 22.553695959791785 27.6195153525738 27.221812169000607 22.604976518633805 86-87 22.463676563487052 27.622926336894725 27.279135424391406 22.63426167522682 88-89 22.51525747771196 27.612658252751903 27.26707862483357 22.605005644702572 90-91 22.524260742704204 27.650873068056615 27.266464429371677 22.558401759867504 92-93 22.571791892762125 27.62536779925839 27.245619423658745 22.557220884320735 94-95 22.371910690790315 27.628128423434955 27.3488408198462 22.65112006592853 96-97 22.444165152417415 27.685003497954042 27.307144858160644 22.5636864914679 98-99 22.616935268987906 28.187962313724746 27.366416063306147 21.8286863539812 100-101 20.476816182959627 31.97402676193858 25.414313179941438 22.134843875160353 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 4171.0 1 3386.0 2 3485.5 3 4536.5 4 5674.5 5 8180.0 6 10386.5 7 12782.5 8 14896.5 9 15215.5 10 14014.5 11 12860.5 12 14362.0 13 19546.0 14 31852.5 15 48633.5 16 62162.5 17 69288.5 18 69256.5 19 63941.5 20 56468.0 21 49049.5 22 44789.5 23 46531.5 24 53575.5 25 66059.5 26 82688.0 27 101350.0 28 123911.5 29 148476.5 30 170699.0 31 194077.0 32 219868.0 33 246118.0 34 272040.0 35 295125.0 36 320265.5 37 342973.5 38 361192.5 39 380358.5 40 395801.0 41 407927.5 42 416912.5 43 426057.0 44 435434.5 45 442100.0 46 446865.5 47 447085.5 48 445025.5 49 442911.5 50 437528.5 51 428181.0 52 412719.0 53 391641.0 54 370511.0 55 348050.5 56 321664.0 57 291438.0 58 260018.5 59 226784.0 60 190788.5 61 156768.0 62 126098.5 63 97704.0 64 73116.0 65 54582.0 66 42050.0 67 32954.5 68 25422.5 69 18962.5 70 13795.0 71 10012.0 72 7189.5 73 5015.5 74 3400.0 75 2233.5 76 1450.5 77 925.0 78 567.5 79 366.5 80 256.5 81 168.5 82 115.5 83 78.0 84 51.0 85 33.0 86 26.5 87 24.0 88 18.0 89 10.0 90 6.0 91 6.0 92 6.0 93 4.5 94 2.0 95 1.0 96 1.0 97 1.0 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.02994340221108964 3 0.0 4 0.0 5 0.0 6 0.0 7 6.405984580612085E-5 8 7.687181496734504E-4 9 5.216301729926984E-4 10-11 0.0 12-13 0.0 14-15 0.001944673890542955 16-17 2.7454219631194655E-5 18-19 0.0 20-21 1.830323267577292E-4 22-23 0.0018990906513304342 24-25 6.911052782639288E-4 26-27 0.014366081544131269 28-29 0.3128950780735308 30-31 0.3138017566332273 32-33 0.33076719769599544 34-35 0.21425534394590803 36-37 0.07231364876303056 38-39 0.06368827948749207 40-41 0.025559068368215802 42-43 0.009757541574214509 44-45 0.012850026091821272 46-47 0.009302237264781662 48-49 0.006252334644500817 50-51 0.006863768536748456 52-53 0.0026975120536778365 54-55 0.0010195616261156652 56-57 0.003382238439229656 58-59 0.003872418787708621 60-61 0.002869696075355988 62-63 0.0021158329620404232 64-65 6.853348796137143E-4 66-67 0.008111191541316695 68-69 0.012081134421671058 70-71 0.012388616984905114 72-73 0.010197116460689902 74-75 0.010487554265679244 76-77 0.009484915229998583 78-79 0.0023623104033018726 80-81 0.0018644428007260228 82-83 0.0016255068708774132 84-85 1.6985939096235932E-5 86-87 0.0027178896359429747 88-89 0.0 90-91 0.008733666915282318 92-93 0.019066282658797565 94-95 0.001474283678656705 96-97 0.0 98-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 145.0 20-21 577.0 22-23 1388.0 24-25 2719.0 26-27 4693.0 28-29 8719.0 30-31 19631.0 32-33 26596.0 34-35 38203.0 36-37 54720.0 38-39 64465.0 40-41 68676.0 42-43 83257.0 44-45 100401.0 46-47 98738.0 48-49 85793.0 50-51 74677.0 52-53 72254.0 54-55 78406.0 56-57 80953.0 58-59 80683.0 60-61 78926.0 62-63 78765.0 64-65 84936.0 66-67 89719.0 68-69 87455.0 70-71 85458.0 72-73 82561.0 74-75 84301.0 76-77 85668.0 78-79 90328.0 80-81 90845.0 82-83 89255.0 84-85 91315.0 86-87 95846.0 88-89 103245.0 90-91 109419.0 92-93 113496.0 94-95 132330.0 96-97 215623.0 98-99 968441.0 100-101 7023656.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 84.0983850558822 #Duplication Level Percentage of deduplicated Percentage of total 1 88.94225842501666 74.79900296766834 2 7.636556125190904 12.84444075034321 3 1.9292489096066088 4.867401530062124 4 0.7004902632764104 2.3564039955566343 5 0.31475231671080156 1.3235080763987987 6 0.15424659542072885 0.7783133745150799 7 0.09894545433088715 0.5824807042493708 8 0.05810672225072547 0.3909345201741367 9 0.04241618323864999 0.3210419259544359 >10 0.12019971766448655 1.5055597816629214 >50 0.0021914886279874126 0.12017443568309968 >100 5.514521006072933E-4 0.08419063264910573 >500 1.8173389295029413E-5 0.011172258169045008 >1k 1.8173175171635396E-5 0.01537504691371825 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 9.151406543731552E-6 0.0 2 0.0 3.660562617492621E-5 0.0 9.151406543731552E-6 0.0 3 0.0 3.660562617492621E-5 0.0 9.151406543731552E-6 0.0 4 0.0 5.490843926238931E-5 0.0 9.151406543731552E-6 0.0 5 0.0 7.321125234985241E-5 0.0 9.151406543731552E-6 0.0 6 6.405984580612087E-5 7.321125234985241E-5 0.0 9.151406543731552E-6 0.0 7 6.405984580612087E-5 7.321125234985241E-5 0.0 1.8302813087463103E-5 0.0 8 6.405984580612087E-5 7.321125234985241E-5 0.0 1.8302813087463103E-5 0.0 9 6.405984580612087E-5 2.0133094396209414E-4 0.0 2.7454219631194655E-5 9.151406543731552E-6 10-11 7.321125234985241E-5 2.0133094396209414E-4 0.0 3.660562617492621E-5 1.3727109815597328E-5 12-13 7.321125234985241E-5 2.104823505058257E-4 0.0 3.660562617492621E-5 1.8302813087463103E-5 14-15 8.236265889358396E-5 2.65390789768215E-4 0.0 3.660562617492621E-5 4.575703271865776E-5 16-17 1.0524117525291285E-4 2.65390789768215E-4 0.0 4.118132944679199E-5 4.575703271865776E-5 18-19 1.0981687852477862E-4 2.7911789958381234E-4 0.0 4.575703271865776E-5 4.575703271865776E-5 20-21 1.0981687852477862E-4 3.019964159431412E-4 0.0 5.9484142534255085E-5 5.0332735990523536E-5 22-23 1.0981687852477862E-4 3.2945063557433585E-4 0.0 6.405984580612087E-5 5.9484142534255085E-5 24-25 1.326953948841075E-4 3.614805584773963E-4 0.0 9.151406543731552E-5 6.405984580612087E-5 26-27 1.4642250469970483E-4 3.752076682929936E-4 0.0 1.2811969161224173E-4 6.405984580612087E-5 28-29 1.4642250469970483E-4 3.752076682929936E-4 0.0 4.529946239147118E-4 6.405984580612087E-5 30-31 1.555739112434364E-4 4.392675140991145E-4 0.0 0.001285772619394283 6.405984580612087E-5 32-33 1.555739112434364E-4 4.392675140991145E-4 0.0 0.002923874390722231 7.321125234985241E-5 34-35 1.6014961451530214E-4 4.89600250089638E-4 0.0 0.00542678408043281 1.0981687852477862E-4 36-37 1.6472531778716792E-4 5.490843926238931E-4 0.0 0.009412221630227901 1.1439258179664439E-4 38-39 1.6472531778716792E-4 5.811143155269535E-4 0.0 0.015141002126603853 1.1896828506851017E-4 40-41 1.6472531778716792E-4 6.314470515174771E-4 0.0 0.0210573864571263 1.1896828506851017E-4 42-43 1.6472531778716792E-4 6.451741613330744E-4 0.0 0.02674498562405546 1.2354398834037595E-4 44-45 1.6472531778716792E-4 7.321125234985241E-4 0.0 0.03356735920240733 1.326953948841075E-4 46-47 1.6472531778716792E-4 8.053237758483766E-4 0.0 0.04074206193269287 1.4642250469970483E-4 48-49 1.6472531778716792E-4 8.053237758483766E-4 0.0 0.04790303755316281 1.555739112434364E-4 50-51 1.7387672433089949E-4 9.197163576450209E-4 0.0 0.05517383005215752 1.555739112434364E-4 52-53 1.8302813087463105E-4 9.334434674606183E-4 0.0 0.062138050431937236 1.8302813087463105E-4 54-55 1.8302813087463105E-4 9.425948740043498E-4 0.0 0.06912972503134815 2.1505805377769146E-4 56-57 1.8302813087463105E-4 9.517462805480814E-4 0.0 0.07654694003504256 2.1963375704955724E-4 58-59 1.8302813087463105E-4 9.654733903636788E-4 0.0 0.08233062897068091 2.1963375704955724E-4 60-61 1.9217953741836258E-4 0.001002079016538605 0.0 0.08793586547871649 2.287851635932888E-4 62-63 2.1963375704955724E-4 0.0010158061263542022 0.0 0.0935731319096551 2.287851635932888E-4 64-65 2.1963375704955724E-4 0.0011530772245101756 0.0 0.09888094770501943 2.287851635932888E-4 66-67 2.287851635932888E-4 0.0011530772245101756 0.0 0.10456854687194858 2.287851635932888E-4 68-69 2.287851635932888E-4 0.0011759557408695044 0.0 0.11042087135666491 2.287851635932888E-4 70-71 2.3793657013702034E-4 0.0011805314441413702 0.0 0.11604898638105982 2.3793657013702034E-4 72-73 2.5623938322448346E-4 0.001185107147413236 0.0 0.12012593799629222 2.7454219631194653E-4 74-75 2.5623938322448346E-4 0.001221712773588162 0.0 0.12327402184733588 2.7454219631194653E-4 76-77 2.699664930400808E-4 0.00126746980630682 0.0 0.12607435224971772 2.7454219631194653E-4 78-79 2.7454219631194653E-4 0.0012994997292098804 0.0 0.12902110515679927 2.7454219631194653E-4 80-81 2.7454219631194653E-4 0.0012994997292098804 0.0 0.1302473936336593 2.9284500939940966E-4 82-83 2.7454219631194653E-4 0.0012994997292098804 0.0 0.1305814199725055 3.2029922903060434E-4 84-85 2.7454219631194653E-4 0.0013178025422973434 0.0 0.13083765935573 3.2029922903060434E-4 86-87 2.836936028556781E-4 0.001345256761928538 0.0 0.13089714349826426 3.2029922903060434E-4 88-89 2.9284500939940966E-4 0.0013955894979190617 0.0 0.13093832482771103 3.2029922903060434E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 14855 0.0 52.620968 1 GTATCAA 27155 0.0 38.254696 1 TCAACGC 33875 0.0 30.123945 4 ATCAACG 34205 0.0 29.85845 3 TATCAAC 35070 0.0 29.363468 2 CAACGCA 35130 0.0 29.121197 5 AACGCAG 36250 0.0 28.221453 6 ACGCAGA 41820 0.0 24.47292 7 CGCAGAG 43250 0.0 23.653818 8 GTGGTAT 7060 0.0 21.559374 1 GCAGAGT 49275 0.0 20.65805 9 GTACATG 35560 0.0 20.639986 1 TGGTATC 7195 0.0 20.019426 2 TACATGG 35900 0.0 19.893574 2 GAGTACT 27690 0.0 19.87089 12-13 ACATGGG 36215 0.0 19.085695 3 AGAGTAC 44535 0.0 18.826725 10-11 CAGAGTA 48205 0.0 18.499144 10-11 GTACTTT 29835 0.0 18.363272 14-15 AGTACTT 30195 0.0 17.353975 12-13 >>END_MODULE