##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138826_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 12418463 Sequences flagged as poor quality 0 Sequence length 19-101 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.693408516013616 31.0 31.0 34.0 30.0 34.0 2 31.890376127867032 31.0 31.0 34.0 30.0 34.0 3 31.954279366134116 33.0 31.0 34.0 30.0 34.0 4 35.66590253560364 37.0 35.0 37.0 33.0 37.0 5 35.41480390930826 37.0 35.0 37.0 33.0 37.0 6 35.44109371667009 37.0 35.0 37.0 33.0 37.0 7 35.39846976232083 37.0 35.0 37.0 33.0 37.0 8 35.38617355465004 37.0 35.0 37.0 33.0 37.0 9 37.14534954929608 39.0 37.0 39.0 33.0 39.0 10-11 36.98788420918112 39.0 37.0 39.0 33.0 39.0 12-13 36.99139088307466 39.0 37.0 39.0 33.0 39.0 14-15 38.090448189924956 40.0 37.0 41.0 33.0 41.0 16-17 38.01539373270268 40.0 37.0 41.0 33.0 41.0 18-19 38.073432356322996 40.0 37.0 41.0 33.0 41.0 20-21 38.11350922096595 40.0 37.0 41.0 33.0 41.0 22-23 38.09847750798531 40.0 37.0 41.0 33.0 41.0 24-25 38.05089046286935 40.0 37.0 41.0 33.0 41.0 26-27 37.926041759866834 40.0 37.0 41.0 33.0 41.0 28-29 37.75242795518684 39.5 37.0 41.0 33.0 41.0 30-31 37.65329530630401 39.0 37.0 41.0 32.0 41.0 32-33 37.56240666343528 39.0 37.0 40.5 32.0 41.0 34-35 37.49160899047446 39.0 37.0 40.0 32.0 41.0 36-37 37.44671221275415 39.0 36.0 40.0 32.0 41.0 38-39 37.362757519127 39.0 36.0 40.0 31.5 41.0 40-41 37.34383021189596 39.0 36.0 40.0 31.5 41.0 42-43 37.29144496512539 39.0 36.0 40.0 31.0 41.0 44-45 37.21935135024937 39.0 36.0 40.0 31.0 41.0 46-47 37.1631150955574 39.0 36.0 40.0 31.0 41.0 48-49 37.177013148193 39.0 36.0 40.0 31.0 41.0 50-51 37.071659893876316 39.0 36.0 40.0 31.0 41.0 52-53 36.8827196611875 39.0 35.0 40.0 31.0 41.0 54-55 36.689725676253204 39.0 35.0 40.0 30.5 41.0 56-57 36.57221578488342 38.0 35.0 40.0 30.0 41.0 58-59 36.384501296459696 38.0 35.0 40.0 30.0 41.0 60-61 36.208427383725436 38.0 34.0 40.0 30.0 41.0 62-63 36.06914746906016 38.0 34.0 40.0 29.5 41.0 64-65 35.816538952325075 37.0 34.0 40.0 29.0 41.0 66-67 35.6822075044656 37.0 34.0 39.5 29.0 41.0 68-69 35.417880089885 36.5 34.0 39.0 29.0 41.0 70-71 35.10009458626705 36.0 34.0 39.0 29.0 40.0 72-73 34.80909234379003 36.0 33.0 39.0 29.0 40.0 74-75 34.4623251000174 35.0 33.0 38.0 28.5 40.0 76-77 32.3294416820293 33.5 30.0 35.5 25.5 38.5 78-79 33.61563312577417 35.0 32.0 37.0 28.0 39.0 80-81 33.62898594066007 35.0 32.5 36.0 28.0 39.0 82-83 33.467048639451065 35.0 32.5 36.0 28.0 37.5 84-85 33.27045173733705 35.0 32.0 35.5 28.0 37.0 86-87 33.03019154945607 34.5 32.0 35.0 28.0 37.0 88-89 32.875178608232545 34.0 32.0 35.0 27.5 36.0 90-91 32.71573517049308 34.0 32.0 35.0 27.0 36.0 92-93 32.685819470225596 34.0 32.0 35.0 27.5 36.0 94-95 32.65345041586539 34.0 32.0 35.0 27.5 35.5 96-97 32.688044179095606 34.0 32.0 35.0 28.5 35.0 98-99 32.84278381018426 34.0 32.0 35.0 29.0 35.0 100-101 31.684734262288185 33.0 30.5 34.5 26.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 4.0 19 22.0 20 110.0 21 581.0 22 2595.0 23 8332.0 24 21269.0 25 44479.0 26 80407.0 27 126834.0 28 182979.0 29 247269.0 30 321038.0 31 407623.0 32 518034.0 33 671553.0 34 906627.0 35 1266921.0 36 1899056.0 37 2669385.0 38 2336261.0 39 700496.0 40 6588.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.312028710799396 20.67161612511951 13.648927407522171 24.367427756558925 2 15.10208725829004 21.79243599575984 40.08350997987179 23.021966766078325 3 18.4640669584638 26.133948332500566 30.453273336557036 24.9487113724786 4 12.65278362592595 17.943350629357376 38.7555189004499 30.648346844266772 5 12.893689017714994 38.09369967925982 36.0446216250755 12.96798967794968 6 30.26224742949268 38.343593728144945 18.478301219724212 12.915857622638164 7 26.538672824380345 32.455846786824324 23.434971254894528 17.5705091339008 8 24.566376775229063 36.99281714839688 21.25188038614219 17.188925690231866 9 25.531959953498273 16.283053708015235 21.179529221933503 37.00545711655299 10-11 24.243480224290842 26.746989222751555 29.186782434928666 19.822748118028937 12-13 24.78067643120174 24.2085419953118 29.378426867851843 21.63235470563462 14-15 21.830769234485782 25.73094995733369 26.662880905632203 25.77539990254833 16-17 21.686137809485764 28.897742820508466 27.38656949736856 22.029549872637215 18-19 21.728264381618825 28.242390080052505 28.846557480676378 21.182788057652296 20-21 22.398195192250046 27.477645556795583 28.701807332367697 21.422351918586674 22-23 22.111623182811154 27.42012068744656 28.55587793660041 21.912378193141876 24-25 21.92801615111129 27.519201277452073 28.63459117751306 21.91819139392358 26-27 21.905963896537926 27.712873791347125 28.519613617964616 21.861548694150333 28-29 21.883385603401294 27.80924494211174 28.49729745076447 21.810072003722503 30-31 22.100264082822033 27.647683292515197 28.469019879345886 21.783032745316884 32-33 21.890642673282535 27.812211927708187 28.395550033786993 21.90159536522229 34-35 21.98298110275709 27.82269936755069 28.396757624073576 21.79756190561864 36-37 21.987267615266386 27.770861592767442 28.39250697295358 21.84936381901259 38-39 21.887373183078473 27.86879798300706 28.41723850245757 21.8265903314569 40-41 22.082601063921654 27.749744464935734 28.298823600771467 21.86883087037115 42-43 21.995119846183652 27.84609240087599 28.149597104645217 22.00919064829514 44-45 22.07967548632073 27.912294658071364 28.00797677120682 22.000053084401088 46-47 22.089791442842436 27.899979218872282 27.853839005743957 22.15639033254132 48-49 22.036136682533037 27.99393500392734 27.85169183398029 22.118236479559332 50-51 22.02648169442885 28.075453381794247 27.786461673160147 22.11160325061676 52-53 22.202212342480635 27.972310373172338 27.66102686028894 22.164450424058085 54-55 22.156158361813887 27.90127917120205 27.725739694891367 22.216822772092694 56-57 22.121165012566195 28.022276356050234 27.706250159660417 22.150308471723154 58-59 22.12019860657291 28.046242350313932 27.682311535038846 22.151247508074317 60-61 22.187499088019937 27.999589061784096 27.71732211281704 22.095589737378926 62-63 22.1633156458359 28.042401114666482 27.65583141444153 22.13845182505609 64-65 22.129327573967732 28.006712886895297 27.6476501934765 22.216309345660466 66-67 22.18479397640732 28.04820641023953 27.534838684071765 22.23216092928138 68-69 22.144198122208273 28.048706107201543 27.57806318933973 22.229032581250458 70-71 22.134398092261172 27.85530894532543 27.65926797226315 22.35102499015024 72-73 22.150659079545846 27.91034549068028 27.647092573570276 22.291902856203595 74-75 22.030094116148366 28.01497182800467 27.60206664409599 22.352867411750978 76-77 22.15693949955564 27.961124724882996 27.53843373739259 22.343502038168776 78-79 22.148518610004594 27.998708139416333 27.497088052669827 22.355685197909242 80-81 22.134149966277974 27.973660488208278 27.53064330057393 22.361546244939817 82-83 22.13766182499796 27.997365938073663 27.59618597596645 22.26878626096193 84-85 22.249074084948237 27.911643842197808 27.57117721731165 22.268104855542305 86-87 22.048673411732185 27.963009182665534 27.63713227672383 22.351185128878445 88-89 22.132632049433838 27.957079953108643 27.58033582549258 22.32995217196494 90-91 22.152807296200493 27.98527300529124 27.62679772687404 22.23512197163423 92-93 22.1260733808415 27.959276590073618 27.61904353351854 22.295606495566343 94-95 21.984806397338364 28.011252728741148 27.667692657173244 22.336248216747247 96-97 22.001790147040765 28.033815434892297 27.704837974056485 22.259556444010457 98-99 22.203628511539602 28.585981738461058 27.822419927074467 21.38796982292487 100-101 26.282737706006966 35.62779456873114 28.391813250076453 9.697654475185441 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 2411.0 1 2116.0 2 2781.0 3 4030.5 4 5339.0 5 8388.0 6 11144.5 7 13184.0 8 14610.5 9 14519.0 10 13340.5 11 11867.5 12 12338.5 13 15803.0 14 24414.5 15 36479.0 16 46275.0 17 52272.0 18 54929.0 19 54778.5 20 53373.5 21 52340.0 22 53776.0 23 60534.5 24 73223.0 25 91857.5 26 116249.5 27 143672.0 28 173315.0 29 204288.5 30 233351.0 31 262355.0 32 290731.5 33 316612.5 34 341916.5 35 364904.5 36 388374.5 37 410670.5 38 428891.5 39 445454.0 40 462763.0 41 479843.0 42 493185.0 43 505700.0 44 517245.0 45 525397.0 46 528738.5 47 528603.5 48 525099.0 49 516907.5 50 506357.5 51 491572.0 52 469844.5 53 445274.0 54 419368.0 55 389900.0 56 359488.5 57 326194.0 58 290107.5 59 252044.0 60 212534.0 61 175306.0 62 141339.0 63 111176.5 64 84861.0 65 64820.5 66 50110.0 67 39049.0 68 30449.5 69 22463.0 70 16219.0 71 11995.5 72 8692.5 73 6238.5 74 4612.5 75 3351.0 76 2295.5 77 1568.5 78 1092.0 79 791.0 80 559.0 81 388.0 82 288.5 83 212.0 84 163.5 85 127.5 86 102.5 87 78.0 88 52.0 89 33.0 90 20.5 91 14.0 92 11.0 93 7.5 94 3.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 5.395192625689669E-4 3 1.449454735259911E-4 4 1.6105052613999013E-5 5 0.0 6 0.0 7 8.052526306999506E-6 8 0.0010951435777519327 9 0.0 10-11 2.6975963128448346E-4 12-13 4.267838942709738E-4 14-15 0.0 16-17 0.0 18-19 4.06652578503475E-4 20-21 0.0 22-23 0.0 24-25 1.570991916239545E-4 26-27 4.030051773672131E-6 28-29 4.355483953550215E-4 30-31 3.392189161390264E-4 32-33 0.0010199742116520155 34-35 0.0011853438083627061 36-37 2.4460418456608746E-5 38-39 0.0016327740248134061 40-41 3.7599811488593475E-4 42-43 9.574797002855413E-5 44-45 9.239365070832332E-5 46-47 3.394221422883077E-5 48-49 1.2857556870474086E-5 50-51 2.1641802544002545E-5 52-53 4.369073461076886E-5 54-55 3.087911290484447E-4 56-57 5.751085528539026E-4 58-59 5.184558095768616E-4 60-61 4.742273832753135E-4 62-63 5.533488209519997E-5 64-65 6.994722901254378E-5 66-67 1.604537026650369E-4 68-69 7.647905716618326E-5 70-71 1.6468712739537428E-4 72-73 0.0 74-75 4.972244928807398E-6 76-77 7.709969297692849E-4 78-79 1.5323347924736007E-5 80-81 2.0212961691254785E-4 82-83 1.578164349719747E-5 84-85 2.135289372280442E-5 86-87 1.0839798776479392E-5 88-89 2.7549434291651422E-5 90-91 7.292918968377341E-5 92-93 5.719737441172501E-5 94-95 2.921321280896551E-4 96-97 6.598620888234359E-5 98-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 476.0 20-21 1341.0 22-23 2662.0 24-25 5509.0 26-27 7548.0 28-29 13556.0 30-31 26497.0 32-33 33469.0 34-35 46403.0 36-37 71642.0 38-39 86610.0 40-41 88612.0 42-43 99947.0 44-45 118780.0 46-47 120059.0 48-49 115805.0 50-51 109238.0 52-53 107173.0 54-55 117314.0 56-57 123794.0 58-59 125471.0 60-61 123497.0 62-63 120144.0 64-65 124988.0 66-67 133655.0 68-69 137245.0 70-71 136665.0 72-73 131490.0 74-75 134806.0 76-77 130189.0 78-79 140586.0 80-81 143697.0 82-83 138683.0 84-85 139374.0 86-87 148059.0 88-89 158966.0 90-91 169333.0 92-93 179010.0 94-95 206357.0 96-97 308088.0 98-99 1065139.0 100-101 7026586.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 85.78839285657465 #Duplication Level Percentage of deduplicated Percentage of total 1 90.15517235166845 77.34267343757129 2 6.961559233647067 11.944419568608588 3 1.613305530278586 4.152086658876715 4 0.5814161527503657 1.9951502930122635 5 0.2846425656147118 1.220951412132911 6 0.14212066840795134 0.7315382240652184 7 0.08299677316393883 0.49841118474111973 8 0.04609707845306501 0.31636754206975065 9 0.02794383420173125 0.21575309637753962 >10 0.10213392385861889 1.3710952037983049 >50 0.002170042774716309 0.121501768621304 >100 3.969000589075558E-4 0.051918961863568355 >500 1.4983802059788292E-5 0.008368190297312662 >1k 2.996131989989668E-5 0.029764457964101695 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 2.4157578920998518E-5 0.0 0.0 0.0 3 0.0 2.4157578920998518E-5 0.0 1.610505261399901E-5 0.0 4 0.0 7.247273676299555E-5 0.0 1.610505261399901E-5 0.0 5 0.0 7.247273676299555E-5 0.0 1.610505261399901E-5 0.0 6 0.0 7.247273676299555E-5 0.0 1.610505261399901E-5 0.0 7 0.0 7.247273676299555E-5 0.0 4.026263153499753E-5 0.0 8 0.0 8.857778937699456E-5 0.0 4.8315157841997035E-5 0.0 9 0.0 2.3352326290298567E-4 0.0 6.442021045599604E-5 0.0 10-11 0.0 2.3352326290298567E-4 0.0 1.0065657883749383E-4 0.0 12-13 0.0 2.3352326290298567E-4 0.0 1.0468284199099357E-4 0.0 14-15 0.0 3.140485259729807E-4 0.0 1.1273536829799308E-4 0.0 16-17 0.0 3.2210105227998024E-4 0.0 1.2481415775849233E-4 0.0 18-19 0.0 3.58337420661478E-4 0.0 1.368929472189916E-4 4.026263153499752E-6 20-21 0.0 3.986000521964755E-4 0.0 1.691030524469896E-4 8.052526306999505E-6 22-23 0.0 4.6302026265247157E-4 0.0 2.2547073659598616E-4 8.052526306999505E-6 24-25 0.0 5.354929994154671E-4 0.0 2.939172102054819E-4 1.2078789460499257E-5 26-27 0.0 5.717293677969649E-4 0.0 3.2210105227998024E-4 2.4157578920998518E-5 28-29 0.0 5.717293677969649E-4 0.0 7.16674841322956E-4 2.4157578920998518E-5 30-31 0.0 6.401758414064608E-4 0.0 0.001888317418991384 2.4157578920998518E-5 32-33 0.0 6.522546308669599E-4 0.0 0.004263812679556238 2.818384207449827E-5 34-35 0.0 7.327798939369551E-4 0.0 0.00731974641306255 3.221010522799802E-5 36-37 0.0 7.972001043929511E-4 0.0 0.011857344987056772 3.221010522799802E-5 38-39 0.0 8.213576833139496E-4 0.0 0.019012014610825835 4.026263153499753E-5 40-41 0.0 8.978566832304449E-4 0.0 0.026859201496996853 4.026263153499753E-5 42-43 0.0 9.300667884584429E-4 0.0 0.033530719542345946 4.026263153499753E-5 44-45 0.0 0.0010387758936029363 0.0 0.04153895695465695 4.026263153499753E-5 46-47 0.0 0.0011354062092869303 0.0 0.05001021462962043 4.026263153499753E-5 48-49 0.0 0.00113943247244043 0.0 0.05785337525263795 4.026263153499753E-5 50-51 0.0 0.0012924304722734207 0.0 0.06542677624437099 4.8315157841997035E-5 52-53 0.0 0.0013246405775014186 0.0 0.07296394086772251 4.8315157841997035E-5 54-55 0.0 0.0013407456301154177 0.0 0.08035213375439457 4.8315157841997035E-5 56-57 0.0 0.0013608769458829165 0.0 0.0881791893247981 4.8315157841997035E-5 58-59 0.0 0.0013608769458829165 0.0 0.09568414384292162 4.8315157841997035E-5 60-61 0.0 0.0014051658405714136 0.0 0.10293141751922118 4.8315157841997035E-5 62-63 0.0 0.0014575072615669105 0.0 0.10928083451229029 4.8315157841997035E-5 64-65 0.0 0.0016507678929348986 0.0 0.11573493434735038 4.8315157841997035E-5 66-67 0.0 0.0016789517350093968 0.0 0.12225345439286649 4.8315157841997035E-5 68-69 0.0 0.0017192143665443944 0.0 0.12918667954319307 4.8315157841997035E-5 70-71 0.0 0.0017473982086188926 0.0 0.13616016732505465 4.8315157841997035E-5 72-73 0.0 0.0017473982086188926 0.0 0.14140638821406482 4.8315157841997035E-5 74-75 0.0 0.0017715557875398911 0.0 0.14586346152498905 4.8315157841997035E-5 76-77 0.0 0.0018359759979958874 0.0 0.14974075294180933 4.8315157841997035E-5 78-79 0.0 0.0018681861032238854 0.0 0.15347309888510358 4.8315157841997035E-5 80-81 0.0 0.0018681861032238854 0.0 0.15522452335687598 4.8315157841997035E-5 82-83 0.0 0.001872212366377385 0.0 0.15599756588234792 4.8315157841997035E-5 84-85 0.0 0.0018802648926843845 0.0 0.15685515993404336 4.8315157841997035E-5 86-87 0.0 0.0019003962084518833 0.0 0.15730610140723533 5.2341420995496784E-5 88-89 0.0 0.001972868945214879 0.0 0.15749130951229634 5.636768414899654E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 12785 0.0 40.016197 1 GTATCAA 21995 0.0 32.25611 1 TCAACGC 24125 0.0 28.350603 4 ATCAACG 24250 0.0 28.152716 3 CAACGCA 24750 0.0 27.651691 5 AACGCAG 25800 0.0 26.591297 6 TATCAAC 26515 0.0 26.189672 2 ACGCAGA 30655 0.0 22.29801 7 CGCAGAG 30930 0.0 22.072708 8 GTACATG 31585 0.0 22.038528 1 TACATGG 31735 0.0 21.473173 2 ACATGGG 32660 0.0 20.339777 3 CATGGGG 23515 0.0 18.287739 4 GCAGAGT 37685 0.0 17.949543 9 AGAGTAC 32700 0.0 17.155087 10-11 GAGTACT 21110 0.0 17.02221 12-13 CAGAGTA 36150 0.0 16.264265 10-11 GAGTACA 22470 0.0 15.656802 1 ATGGGGG 14705 0.0 15.333363 5 GTACTTT 24740 0.0 14.728493 14-15 >>END_MODULE