##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138825_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 20812322 Sequences flagged as poor quality 0 Sequence length 19-101 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.138038561963437 31.0 31.0 34.0 28.0 34.0 2 31.349468021876657 31.0 31.0 34.0 28.0 34.0 3 31.398916036374988 31.0 31.0 34.0 28.0 34.0 4 35.214929934295654 37.0 35.0 37.0 32.0 37.0 5 34.793338532817245 35.0 35.0 37.0 32.0 37.0 6 34.803730934011114 35.0 35.0 37.0 32.0 37.0 7 34.77042013860827 35.0 35.0 37.0 32.0 37.0 8 34.74297769369511 35.0 35.0 37.0 32.0 37.0 9 36.450206853420774 38.0 35.0 39.0 32.0 39.0 10-11 36.21861849437079 38.0 35.0 39.0 32.0 39.0 12-13 36.23405576754002 38.0 35.0 39.0 32.0 39.0 14-15 37.1960596467804 39.0 36.0 40.0 32.0 41.0 16-17 37.08254242366614 38.0 36.0 40.0 32.0 41.0 18-19 37.12735645258612 38.5 36.0 40.0 32.0 41.0 20-21 37.17132118223016 39.0 36.0 40.0 32.0 41.0 22-23 37.143766066831816 39.0 36.0 40.0 32.0 41.0 24-25 37.08291382471066 39.0 36.0 40.0 31.0 41.0 26-27 36.913137326116626 39.0 36.0 40.0 31.0 41.0 28-29 36.713592357633374 38.5 36.0 40.0 30.5 41.0 30-31 36.58529866942754 38.0 35.0 40.0 30.0 41.0 32-33 36.45623764303368 38.0 35.0 40.0 30.0 41.0 34-35 36.35874684434209 38.0 35.0 40.0 30.0 41.0 36-37 36.29849951373012 38.0 35.0 40.0 30.0 41.0 38-39 36.202848886978515 38.0 35.0 40.0 30.0 41.0 40-41 36.1793482091413 38.0 35.0 40.0 30.0 41.0 42-43 36.11733837477957 38.0 35.0 40.0 30.0 41.0 44-45 36.03680407572983 38.0 35.0 40.0 29.5 41.0 46-47 35.96491479384525 38.0 34.0 40.0 29.0 41.0 48-49 35.974345801573975 38.0 34.0 40.0 29.0 41.0 50-51 35.85072584045878 38.0 34.0 40.0 29.0 41.0 52-53 35.63483903663167 38.0 34.0 40.0 28.0 41.0 54-55 35.41365597370982 38.0 33.5 40.0 28.0 41.0 56-57 35.27993904642321 37.5 33.0 40.0 28.0 41.0 58-59 35.07945609617725 37.0 33.0 39.5 27.0 40.0 60-61 34.90537904522077 37.0 33.0 39.0 27.0 40.0 62-63 34.779363858320544 36.5 33.0 39.0 27.0 40.0 64-65 34.53429557532002 36.0 32.0 39.0 26.0 40.0 66-67 34.42478913359943 36.0 32.0 39.0 26.0 40.0 68-69 34.17981346902382 35.5 32.0 39.0 26.0 40.0 70-71 33.87554280763129 35.0 32.0 38.0 26.0 40.0 72-73 33.601722868721765 35.0 31.0 38.0 26.0 40.0 74-75 33.274663623426726 35.0 31.0 37.0 26.0 39.0 76-77 31.252620654592214 33.0 29.0 35.5 23.5 37.5 78-79 32.53533834164823 34.0 31.0 36.0 26.0 39.0 80-81 32.593656971274356 34.0 31.0 36.0 26.0 38.0 82-83 32.47255910147479 34.0 31.0 35.5 26.0 37.0 84-85 32.282723220021694 34.0 31.0 35.0 26.0 37.0 86-87 32.034424259575886 34.0 31.0 35.0 25.5 36.5 88-89 31.898238008545206 34.0 31.0 35.0 25.0 36.0 90-91 31.74588271667112 34.0 31.0 35.0 25.0 36.0 92-93 31.74757524230919 34.0 31.0 35.0 25.0 35.0 94-95 31.763412343127904 34.0 31.0 35.0 25.0 35.0 96-97 31.864909397033323 34.0 31.0 35.0 26.0 35.0 98-99 32.12148193316913 34.0 31.0 35.0 26.5 35.0 100-101 31.015514201131055 32.5 28.5 34.5 23.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 2.0 18 7.0 19 107.0 20 496.0 21 2527.0 22 9583.0 23 28789.0 24 68609.0 25 135362.0 26 229800.0 27 351402.0 28 493251.0 29 651748.0 30 827291.0 31 1029762.0 32 1279125.0 33 1611481.0 34 2065784.0 35 2677052.0 36 3388615.0 37 3518113.0 38 2081682.0 39 360670.0 40 1064.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.703353522975476 21.525339652154145 14.0879667343221 23.68334009054828 2 15.512486563229078 22.614539523085682 39.53936933039379 22.33360458329145 3 18.798449109569905 26.68486647945047 30.68934421574317 23.827340195236452 4 13.144666867733482 18.59921520518689 38.54335021484151 29.71276771223812 5 12.778742323898316 38.37495402963687 36.064212344975246 12.78209130148957 6 29.904409512787666 38.8886497143375 18.427439283324563 12.779501489550277 7 26.185074399675344 32.72634355743679 23.641129519329944 17.447452523557917 8 24.391212499109894 37.31994253729056 21.32694307822572 16.96190188537383 9 25.49189369643618 16.24647168153558 21.32287305568307 36.93876156634517 10-11 24.111691059753245 27.034003741107988 29.26441493073069 19.589890268408077 12-13 24.671820026732817 24.503596956724493 29.480560880345134 21.34402213619755 14-15 21.725242863338362 25.98572855061535 26.806631667528496 25.482396918517793 16-17 21.5077352134888 29.15749691835195 27.540906476963656 21.793861391195595 18-19 21.573171672171036 28.438141373916476 29.047755757365074 20.940931196547417 20-21 22.269969397887763 27.66588797901844 28.948908623971707 21.115233999122086 22-23 21.99168201060875 27.61188666074416 28.81501849022819 21.5814128384189 24-25 21.774297631276067 27.707700033670747 28.886842036120804 21.631160298932382 26-27 21.779256981417923 27.875838516000513 28.778709030624487 21.566195471957077 28-29 21.78520159686779 27.981634802414824 28.734109727720362 21.499053872997024 30-31 21.96648560927456 27.83923783164331 28.68451567965147 21.509760879430665 32-33 21.819114353828528 27.947122672615716 28.625717601321988 21.608045372233768 34-35 21.87637593486053 27.988382749420172 28.623618929607947 21.511622386111352 36-37 21.903376126776404 27.905644368627776 28.62353265170965 21.567446852886174 38-39 21.78606241010921 28.015730289374247 28.649213969774976 21.54899333074157 40-41 21.983626214518477 27.943049290797806 28.48828422749999 21.58504026718373 42-43 21.89718471906543 28.041322544097184 28.333910332517355 21.72758240432003 44-45 22.0050171279989 28.11704935727014 28.142036020385635 21.73589749434532 46-47 22.022731853075744 28.10187381425125 27.989002924003614 21.88639140866939 48-49 21.957826657947816 28.21318559999437 27.981536118205696 21.847451623852116 50-51 21.95383766811247 28.300397765453006 27.89274468603083 21.853019880403693 52-53 22.101154728071513 28.18227008176285 27.790749809799987 21.92582538036565 54-55 22.0835310636136 28.111358132670976 27.85184540449691 21.953265399218516 56-57 22.068549808209976 28.209827081505306 27.809221658486138 21.91240145179858 58-59 22.043088463206658 28.293256041333485 27.775277564847556 21.888377930612297 60-61 22.10504734088148 28.22828098346396 27.821998912653235 21.844672763001324 62-63 22.07467999669722 28.2958445349995 27.760470603587496 21.869004864715784 64-65 22.065516842508522 28.244021129588788 27.75382598558616 21.93663604231653 66-67 22.09525225467064 28.26235941734313 27.655180557886062 21.987207770100166 68-69 22.080807566521482 28.264678170615426 27.695156448853297 21.959357814009795 70-71 22.03421564104643 28.07076159037801 27.77426142930836 22.1207613392672 72-73 22.08385155310017 28.115849646305463 27.746635060896747 22.053663739697623 74-75 21.961524230152914 28.227567225720097 27.727621032831184 22.083287511295808 76-77 22.060476364786545 28.153902947881114 27.708069083469276 22.077551603863064 78-79 22.051809170636112 28.18276212904665 27.646492617312934 22.118936083004296 80-81 22.025473494284437 28.1831024645347 27.6886151402859 22.102808900894967 82-83 22.07401392265196 28.106183207128627 27.778763583742506 22.04103928647691 84-85 22.14420312114964 28.093871187475738 27.719371239499775 22.042554451874846 86-87 21.98280922395263 28.109737914432042 27.802235752110438 22.105217109504892 88-89 22.03138664172462 28.08248245739146 27.751123263649852 22.135007637234068 90-91 22.01784972325035 28.104750446152227 27.829218889369994 22.04818094122743 92-93 22.018275519215003 28.06139303369809 27.85756652473167 22.062764922355242 94-95 21.854257013327356 28.111265527817604 27.913230259916332 22.121247198938708 96-97 21.802441237899757 28.167468571348646 27.96363297641783 22.066457214333767 98-99 21.95716591439988 28.84229711590966 28.005569180163516 21.19496778952694 100-101 22.827767910804532 31.399834570404035 25.145932277791 20.62646524100043 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 2940.0 1 2740.0 2 4468.0 3 6842.0 4 9127.5 5 14827.0 6 20087.0 7 24044.5 8 27177.0 9 27143.5 10 24440.5 11 21268.0 12 21911.5 13 28609.0 14 45466.0 15 69167.0 16 88670.5 17 100037.0 18 104608.5 19 104060.0 20 100860.5 21 98207.0 22 100463.0 23 112148.0 24 134153.0 25 166790.0 26 208875.0 27 254294.5 28 303776.5 29 358903.0 30 409582.0 31 457112.0 32 506374.0 33 551268.0 34 591604.0 35 629081.0 36 669086.5 37 705011.5 38 732469.5 39 755753.5 40 779014.0 41 802074.0 42 817259.5 43 830504.0 44 845354.5 45 856529.5 46 860243.5 47 859066.5 48 853670.5 49 840546.0 50 825011.5 51 802462.0 52 765874.5 53 725783.0 54 684396.5 55 633430.0 56 578724.0 57 523311.5 58 464007.5 59 403358.0 60 342185.5 61 283278.0 62 228572.5 63 179765.5 64 137029.0 65 103347.0 66 78603.0 67 61073.0 68 47718.5 69 35774.5 70 26545.0 71 19883.0 72 14988.0 73 11067.0 74 8150.5 75 6048.5 76 4394.0 77 3065.0 78 2171.0 79 1587.0 80 1157.0 81 870.0 82 682.0 83 490.0 84 348.0 85 266.5 86 204.0 87 155.5 88 109.5 89 74.5 90 58.5 91 50.5 92 42.5 93 24.0 94 8.0 95 4.5 96 4.0 97 4.0 98 2.5 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 1.4414537695505578E-4 3 9.609691797003718E-5 4 1.4414537695505575E-5 5 0.0 6 0.0 7 0.0 8 0.0010378467140764016 9 0.0 10-11 1.8498656709232155E-4 12-13 3.6276586533689033E-4 14-15 0.0 16-17 2.4024229492509295E-6 18-19 3.219246751996245E-4 20-21 0.0 22-23 0.0 24-25 1.1538473465249016E-4 26-27 0.0 28-29 3.5625115465693074E-4 30-31 2.3381058170771104E-4 32-33 7.416045413832968E-4 34-35 9.229337034434754E-4 36-37 2.6751569338255914E-5 38-39 0.0014551555660348495 40-41 2.5352144361903386E-4 42-43 9.171167851061028E-5 44-45 1.0247595657868772E-4 46-47 2.01888597165474E-5 48-49 1.0191129019642434E-5 50-51 1.028621628245806E-5 52-53 2.0756400060826632E-5 54-55 2.0424340818147246E-4 56-57 4.7608398703411707E-4 58-59 2.699955351827439E-4 60-61 3.621593236161122E-4 62-63 6.55746842374033E-5 64-65 3.591455275911341E-5 66-67 7.548319096970544E-5 68-69 8.778332492878789E-5 70-71 7.174589326506951E-5 72-73 0.0 74-75 8.845003780207198E-6 76-77 6.786995208261788E-4 78-79 1.5158274363856488E-5 80-81 1.539133216197087E-4 82-83 3.127336413488665E-6 84-85 6.356020810629097E-6 86-87 6.466514046157654E-6 88-89 2.6357436824930444E-5 90-91 3.364899908023826E-5 92-93 1.0335155306378789E-5 94-95 1.663266996111494E-4 96-97 2.5630479590577253E-5 98-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 1044.0 20-21 3060.0 22-23 5707.0 24-25 10810.0 26-27 14866.0 28-29 23842.0 30-31 42261.0 32-33 53749.0 34-35 72972.0 36-37 107196.0 38-39 129627.0 40-41 137605.0 42-43 159051.0 44-45 189061.0 46-47 190243.0 48-49 183651.0 50-51 174178.0 52-53 172574.0 54-55 187703.0 56-57 198252.0 58-59 203787.0 60-61 201660.0 62-63 199802.0 64-65 209413.0 66-67 225256.0 68-69 233334.0 70-71 235196.0 72-73 229457.0 74-75 239716.0 76-77 223655.0 78-79 246817.0 80-81 255258.0 82-83 253767.0 84-85 264354.0 86-87 282141.0 88-89 309077.0 90-91 339657.0 92-93 369289.0 94-95 441031.0 96-97 639780.0 98-99 1865453.0 100-101 1.128697E7 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 83.42761378475919 #Duplication Level Percentage of deduplicated Percentage of total 1 89.03848830123499 74.28268613974231 2 7.207932688291482 12.026812490106458 3 2.0214731337844616 5.059400396449107 4 0.7985702373946272 2.6649123738144973 5 0.3570648469307544 1.489453407292657 6 0.1862723499120404 0.9324154600344735 7 0.1260639221010507 0.7362048543666897 8 0.07604829566186296 0.5075622271573664 9 0.04827169096958739 0.3624472791853186 >10 0.13703244708120937 1.689661773670779 >50 0.0021157061900258186 0.11767979732628486 >100 6.260909703750188E-4 0.0832560129796529 >500 1.0077091280375447E-5 0.007246900196539433 >1k 3.0212386145394002E-5 0.04026088767794853 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 1.9219383594007436E-5 0.0 4.804845898501859E-6 0.0 3 0.0 1.9219383594007436E-5 0.0 4.804845898501859E-6 0.0 4 0.0 6.726784257902602E-5 0.0 9.609691797003718E-6 0.0 5 0.0 7.207268847752787E-5 0.0 9.609691797003718E-6 0.0 6 4.324361308651673E-5 7.207268847752787E-5 0.0 9.609691797003718E-6 4.804845898501859E-6 7 4.324361308651673E-5 7.207268847752787E-5 0.0 9.609691797003718E-6 9.609691797003718E-6 8 4.324361308651673E-5 8.16823802745316E-5 0.0 9.609691797003718E-6 9.609691797003718E-6 9 4.324361308651673E-5 1.633647605490632E-4 0.0 2.882907539101115E-5 9.609691797003718E-6 10-11 4.324361308651673E-5 1.6816960644756504E-4 0.0 4.324361308651673E-5 1.2012114746254646E-5 12-13 4.324361308651673E-5 1.6816960644756504E-4 0.0 4.324361308651673E-5 1.6816960644756505E-5 14-15 4.324361308651673E-5 2.450471408235948E-4 0.0 5.2853304883520445E-5 4.564603603576766E-5 16-17 6.726784257902602E-5 2.4985198672209665E-4 0.0 6.006057373127323E-5 4.804845898501859E-5 18-19 6.726784257902602E-5 2.7147379326535504E-4 0.0 6.246299668052416E-5 6.006057373127323E-5 20-21 6.726784257902602E-5 2.9309559980861337E-4 0.0 6.967026552827694E-5 7.207268847752787E-5 22-23 6.726784257902602E-5 3.171198293011227E-4 0.0 1.0330418681778997E-4 7.927995732528066E-5 24-25 7.207268847752787E-5 3.843876718801487E-4 0.0 1.537550687520595E-4 8.648722617303345E-5 26-27 7.687753437602974E-5 4.08411901372658E-4 0.0 2.810834850623587E-4 8.648722617303345E-5 28-29 7.687753437602974E-5 4.132167472711599E-4 0.0 8.50457724034829E-4 9.369449502078624E-5 30-31 7.687753437602974E-5 4.7087489805318214E-4 0.0 0.0022078266903616042 9.609691797003718E-5 32-33 7.687753437602974E-5 4.732773210024331E-4 0.0 0.004591030256018526 9.609691797003718E-5 34-35 8.16823802745316E-5 5.45350009479961E-4 0.0 0.007738204319537244 9.609691797003718E-5 36-37 8.408480322378252E-5 6.15020275008238E-4 0.0 0.012728036785131423 9.609691797003718E-5 38-39 8.648722617303345E-5 6.390445045007472E-4 0.0 0.020516691986602935 9.609691797003718E-5 40-41 9.129207207153531E-5 6.967026552827696E-4 0.0 0.029532985315141674 9.609691797003718E-5 42-43 9.369449502078624E-5 7.111171929782751E-4 0.0 0.036987703726667306 9.609691797003718E-5 44-45 9.84993409192881E-5 8.096165338975632E-4 0.0 0.04588147348479425 1.0090176386853903E-4 46-47 1.0090176386853903E-4 8.937013371213457E-4 0.0 0.05539506836382793 1.0330418681778997E-4 48-49 1.0090176386853903E-4 8.985061830198476E-4 0.0 0.06536992844911779 1.0570660976704089E-4 50-51 1.0090176386853903E-4 9.946031009898848E-4 2.4024229492509295E-6 0.0745640010759011 1.1051145566554275E-4 52-53 1.0090176386853903E-4 9.994079468883866E-4 4.804845898501859E-6 0.08347458779467279 1.1051145566554275E-4 54-55 1.0090176386853903E-4 9.994079468883866E-4 4.804845898501859E-6 0.09298337782780797 1.1051145566554275E-4 56-57 1.0090176386853903E-4 0.0010090176386853902 4.804845898501859E-6 0.10258586235596392 1.1771872451329554E-4 58-59 1.0090176386853903E-4 0.0010162249075331433 4.804845898501859E-6 0.11210185965794686 1.225235704117974E-4 60-61 1.0330418681778997E-4 0.0010306394452286485 4.804845898501859E-6 0.12094998338003804 1.2732841631029926E-4 62-63 1.153163015640446E-4 0.0010426515599749034 4.804845898501859E-6 0.12977168044968745 1.297308392595502E-4 64-65 1.153163015640446E-4 0.001191601782828461 4.804845898501859E-6 0.13834352553261475 1.321332622088011E-4 66-67 1.1771872451329554E-4 0.0012012114746254646 4.804845898501859E-6 0.1472132710612492 1.3453568515805204E-4 68-69 1.2012114746254647E-4 0.0012444550877119816 4.804845898501859E-6 0.15615749170131038 1.3934053105655388E-4 70-71 1.2732841631029926E-4 0.0012612720483567378 4.804845898501859E-6 0.16429690065337255 1.4414537695505575E-4 72-73 1.561574917013104E-4 0.0012660768942552398 4.804845898501859E-6 0.16990175339397498 1.537550687520595E-4 74-75 1.5855991465056133E-4 0.0012925035466970001 4.804845898501859E-6 0.17469939202362908 1.6096233759981226E-4 76-77 1.5855991465056133E-4 0.0013405520056820185 4.804845898501859E-6 0.17863696323745137 1.633647605490632E-4 78-79 1.5855991465056133E-4 0.0013741859269715316 4.804845898501859E-6 0.18244720603496334 1.6576718349831413E-4 80-81 1.5855991465056133E-4 0.0013741859269715316 4.804845898501859E-6 0.18435953470256705 1.729744523460669E-4 82-83 1.5855991465056133E-4 0.0013741859269715316 4.804845898501859E-6 0.18513311489222586 1.7777929824456878E-4 84-85 1.5855991465056133E-4 0.0013934053105655391 4.804845898501859E-6 0.18599558473100697 1.9219383594007433E-4 86-87 1.6096233759981226E-4 0.0014222343859565502 4.804845898501859E-6 0.18635354575044533 2.0180352773707807E-4 88-89 1.6816960644756504E-4 0.001463075576093816 4.804845898501859E-6 0.18648567901265414 2.0660837363557994E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 21880 0.0 46.683136 1 GTATCAA 37230 0.0 33.03308 1 TCAACGC 43670 0.0 27.326754 4 ATCAACG 44180 0.0 27.039772 3 CAACGCA 45085 0.0 26.450499 5 AACGCAG 46620 0.0 25.67859 6 TATCAAC 47210 0.0 25.641836 2 ACGCAGA 55480 0.0 21.524889 7 GTACATG 56020 0.0 21.519136 1 CGCAGAG 56395 0.0 21.16078 8 TACATGG 55345 0.0 21.092457 2 ACATGGG 56590 0.0 20.191246 3 CATGGGG 41690 0.0 17.973347 4 GAGTACT 39900 0.0 17.434324 12-13 GCAGAGT 67640 0.0 17.431826 9 AGAGTAC 60515 0.0 16.729975 10-11 CAGAGTA 65810 0.0 16.591293 10-11 GAGTACA 40440 0.0 16.486029 1 GTGGTAT 11865 0.0 15.902845 1 AGTACAT 43175 0.0 14.995165 2 >>END_MODULE