##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138821_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 10568093 Sequences flagged as poor quality 0 Sequence length 19-101 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.36701096404053 33.0 31.0 34.0 31.0 34.0 2 32.58055403183904 34.0 31.0 34.0 31.0 34.0 3 32.68116745376862 34.0 31.0 34.0 31.0 34.0 4 36.172391745606326 37.0 35.0 37.0 35.0 37.0 5 36.006776719319184 37.0 35.0 37.0 35.0 37.0 6 36.04425197620801 37.0 35.0 37.0 35.0 37.0 7 36.02910014134054 37.0 35.0 37.0 35.0 37.0 8 35.984824319770844 37.0 35.0 37.0 35.0 37.0 9 37.82297941549152 39.0 38.0 39.0 35.0 39.0 10-11 37.694483716220134 39.0 37.0 39.0 35.0 39.0 12-13 37.71301615154219 39.0 37.0 39.0 35.0 39.0 14-15 39.048466360014054 40.0 38.0 41.0 36.0 41.0 16-17 39.014693757899366 40.0 38.0 41.0 36.0 41.0 18-19 39.04506839597267 40.0 38.5 41.0 36.0 41.0 20-21 39.03874782445321 40.0 39.0 41.0 36.0 41.0 22-23 39.00020808841238 40.0 39.0 41.0 36.0 41.0 24-25 39.003783288906625 40.0 38.0 41.0 36.0 41.0 26-27 38.87749404108243 40.0 38.0 41.0 35.0 41.0 28-29 38.790634801572224 40.0 38.0 41.0 35.0 41.0 30-31 38.68929218411013 40.0 38.0 41.0 35.0 41.0 32-33 38.606500227262856 40.0 38.0 41.0 35.0 41.0 34-35 38.541219844124015 40.0 38.0 41.0 35.0 41.0 36-37 38.5078114450144 40.0 38.0 41.0 34.5 41.0 38-39 38.44104975431526 40.0 38.0 41.0 34.0 41.0 40-41 38.41141341533054 40.0 38.0 41.0 34.0 41.0 42-43 38.37726183426377 40.0 38.0 41.0 34.0 41.0 44-45 38.30630586254996 40.0 38.0 41.0 34.0 41.0 46-47 38.22392117938294 40.0 38.0 41.0 34.0 41.0 48-49 38.18258606610857 40.0 38.0 41.0 33.5 41.0 50-51 38.101772383560686 40.0 37.0 41.0 33.0 41.0 52-53 37.92523489464723 40.0 37.0 41.0 33.0 41.0 54-55 37.775800450009974 39.5 37.0 41.0 33.0 41.0 56-57 37.62672458416711 39.0 36.0 41.0 33.0 41.0 58-59 37.45535802255575 39.0 36.0 40.5 32.5 41.0 60-61 37.31606387293011 39.0 36.0 40.0 32.0 41.0 62-63 37.11047504008259 39.0 35.0 40.0 32.0 41.0 64-65 36.879833635860564 38.0 35.0 40.0 32.0 41.0 66-67 36.64781746859684 38.0 35.0 40.0 31.0 41.0 68-69 36.37121258597296 37.0 35.0 40.0 31.0 41.0 70-71 36.06976038751283 37.0 35.0 39.0 31.0 41.0 72-73 35.76225379370047 36.0 34.0 39.0 31.0 40.5 74-75 35.36916086387532 36.0 34.0 39.0 30.5 40.0 76-77 33.3778162724424 34.5 32.0 36.5 27.5 39.0 78-79 34.540952596373 35.0 33.5 37.0 30.0 39.0 80-81 34.54078168331097 35.0 34.0 37.0 30.0 39.0 82-83 34.282614873748564 35.0 34.0 36.0 30.0 38.5 84-85 33.981123756496345 35.0 34.0 36.0 30.0 37.0 86-87 33.80490688355546 35.0 34.0 35.5 30.0 37.0 88-89 33.62279383423856 35.0 33.0 35.0 30.0 36.5 90-91 33.456139496477796 35.0 33.0 35.0 29.0 36.0 92-93 33.379650855468626 35.0 33.0 35.0 29.0 36.0 94-95 33.316236042060524 35.0 33.0 35.0 29.0 36.0 96-97 33.352479545647086 35.0 33.0 35.0 30.0 35.5 98-99 33.41126155828964 35.0 33.0 35.0 30.0 35.0 100-101 32.138233565614115 33.5 31.0 34.5 27.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 5.0 19 7.0 20 52.0 21 200.0 22 897.0 23 3004.0 24 8168.0 25 17727.0 26 33000.0 27 54667.0 28 81065.0 29 113763.0 30 152626.0 31 200560.0 32 266031.0 33 364026.0 34 533208.0 35 837069.0 36 1505383.0 37 2653713.0 38 2798265.0 39 931452.0 40 13205.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.34721439336312 20.089499590891187 12.889704888100436 24.67358112764526 2 14.91847096594771 21.386857038444436 40.8942677924476 22.80040420316025 3 18.495039738957633 26.001587987539477 30.196223670628182 25.307148602874708 4 12.420026018630914 17.506083567724332 38.91092120109631 31.162969212548447 5 12.908203070479857 38.10159012230727 35.97862615211598 13.011580655096894 6 30.397900312536404 38.0674048729335 18.584593996488852 12.95010081804125 7 26.562190548474547 32.37282260858227 23.56514084423746 17.499845998705727 8 24.39378608799147 37.217130848488935 21.42968461765051 16.95939844586909 9 25.917864273147483 15.902452788786018 21.139215939905146 37.04046699816136 10-11 24.399711564997396 26.606496714086415 29.21697920967655 19.77681251123964 12-13 24.826327826258847 24.17659542074157 29.34121766915596 21.65585908384362 14-15 21.89217212093857 25.502960917497646 26.695337876726573 25.909529084837214 16-17 21.760132126013655 28.600694562396452 27.401414805868953 22.237758505720947 18-19 21.81035404949758 28.05840742473615 28.779525001557772 21.351713524208503 20-21 22.575057712134885 27.38328489272292 28.536075058161614 21.505582336980577 22-23 22.231800345683087 27.355335110454305 28.423878933697132 21.988985610165475 24-25 21.99750884750051 27.391816148989072 28.57848083994783 22.032194163562586 26-27 22.0332579228791 27.586137681298013 28.427309516960914 21.953294878861975 28-29 21.966946498851357 27.70443786945811 28.391800364037945 21.936815267652587 30-31 22.197287776716497 27.563933921316398 28.31953678465456 21.919241517312546 32-33 21.965460123719964 27.74102935200302 28.323335448407633 21.970175075869378 34-35 22.06148639707352 27.73036955950012 28.33935987444882 21.868784168977538 36-37 22.102652067061765 27.673119217592028 28.28036636275135 21.943862352594852 38-39 21.964810970457034 27.788596561875305 28.36539661284254 21.88119585482512 40-41 22.184264997333422 27.687233348305117 28.221903159466166 21.90659849489529 42-43 22.056462255850782 27.777228973541646 28.099719860039023 22.066588910568548 44-45 22.15611284160343 27.88368575914814 27.95299148650053 22.007209912747904 46-47 22.181371725509432 27.803795209226266 27.78859156438341 22.226241500880892 48-49 22.16880166543701 27.868665885721207 27.815546386471972 22.146986062369812 50-51 22.07054197231243 28.008929648181436 27.748239848266444 22.172288531239694 52-53 22.279783057998458 27.902270379448385 27.596243730969032 22.22170283158412 54-55 22.25493322108441 27.824485402229094 27.666228262160537 22.25435311452596 56-57 22.233623602857357 27.915665556805063 27.680120950904197 22.17058988943338 58-59 22.231516654698723 27.97316982664167 27.634426513595457 22.16088700506415 60-61 22.302183151223957 27.925970663386266 27.639043526213953 22.13280265917582 62-63 22.24974638301875 27.99258590225501 27.606050948460325 22.15161676626592 64-65 22.23563015294067 27.957792043294248 27.62374964156101 22.18282816220408 66-67 22.272292780552664 27.98552901154896 27.473878490398256 22.268299717500117 68-69 22.194019083500464 27.988504835406353 27.566782437500827 22.250693643592356 70-71 22.22092717939836 27.79011776334456 27.62505406487264 22.36390099238444 72-73 22.25951401523679 27.823353661901628 27.620531518186652 22.29660080467493 74-75 22.096388281025543 27.96035463160573 27.594342410174267 22.348914677194465 76-77 22.203896055194107 27.921184678227274 27.524603947229775 22.350315319348844 78-79 22.18085669541 27.94212941995321 27.490707094117568 22.386306790519225 80-81 22.18904499674455 27.947118288809264 27.50021379322328 22.363622921222902 82-83 22.224110162500796 27.89071701677187 27.641581562117736 22.243591258609598 84-85 22.358997551531765 27.88786257662797 27.520890716139156 22.23224915570111 86-87 22.1475070517815 27.916369678448593 27.60285312355133 22.333270146218574 88-89 22.236418647166577 27.863907796961957 27.571012338974967 22.328661216896506 90-91 22.26270379550747 27.934720013113655 27.596975039716025 22.205601151662847 92-93 22.258613766908606 27.934875063016307 27.55562056286412 22.250890607210966 94-95 22.124784102902012 27.97463374261204 27.650733426442404 22.249848728043546 96-97 22.12115732210154 27.98094288345327 27.691747797756943 22.20615199668825 98-99 22.38465517719687 28.582898303342237 27.71559727346755 21.316849245993343 100-101 23.124409911685532 31.180771573377186 24.837783293264614 20.85703522167267 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1681.0 1 1504.0 2 2226.0 3 3391.5 4 4860.5 5 8152.0 6 10800.5 7 12458.0 8 13264.0 9 12610.0 10 11136.5 11 9611.5 12 10134.5 13 13465.5 14 21277.5 15 31507.5 16 39069.0 17 42919.5 18 44061.5 19 43181.5 20 41554.0 21 40910.0 22 43114.5 23 50000.0 24 61426.5 25 76844.0 26 95960.5 27 115479.0 28 134026.5 29 153891.0 30 172431.0 31 192065.0 32 216318.5 33 240076.0 34 263597.5 35 287303.0 36 311807.5 37 332790.5 38 347803.5 39 361479.0 40 377098.0 41 393050.5 42 403262.5 43 411828.0 44 422889.0 45 432045.5 46 437969.0 47 441576.0 48 441224.0 49 434786.5 50 426181.5 51 415052.5 52 397244.0 53 378648.0 54 359162.0 55 334439.0 56 307323.0 57 277548.0 58 245108.0 59 212975.5 60 179499.0 61 146947.0 62 118466.5 63 92669.0 64 69388.0 65 51340.5 66 38530.0 67 29308.5 68 22128.5 69 15983.0 70 11336.0 71 7993.0 72 5494.5 73 3695.5 74 2487.0 75 1661.0 76 1138.5 77 766.5 78 520.5 79 352.0 80 241.0 81 166.5 82 123.0 83 85.5 84 57.5 85 44.5 86 35.0 87 28.0 88 21.0 89 13.5 90 8.0 91 7.5 92 7.0 93 5.0 94 2.5 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0013247423163289724 3 0.0 4 0.0026589470777745807 5 3.595729144321497E-4 6 4.1634758513196276E-4 7 0.0 8 0.0 9 0.0 10-11 2.602172407074767E-4 12-13 4.731222558317759E-4 14-15 4.731222558317759E-6 16-17 0.0 18-19 0.0011496870816712153 20-21 0.0 22-23 0.0 24-25 0.0 26-27 5.2074656689541175E-5 28-29 0.0 30-31 5.6913487657100785E-5 32-33 8.460225627563377E-4 34-35 6.861923003410328E-4 36-37 3.96960753685948E-4 38-39 0.0015289936870350903 40-41 4.836889680655484E-6 42-43 3.406369960488542E-5 44-45 1.4702103768134494E-5 46-47 1.9764240283355962E-5 48-49 0.0 50-51 5.018573237695387E-6 52-53 5.053530277493895E-6 54-55 0.0029564205796792746 56-57 0.0026761055609832423 58-59 0.0014518393124915686 60-61 1.5102775952714355E-4 62-63 2.0994778808458122E-5 64-65 1.2692770124096155E-4 66-67 3.198714372719317E-5 68-69 1.3443989918083082E-4 70-71 0.0 72-73 0.0 74-75 9.941321899782196E-5 76-77 0.0 78-79 4.048261347656082E-4 80-81 0.0 82-83 1.5488479984093905E-4 84-85 2.3174725320119723E-5 86-87 0.0014455379812471 88-89 0.0 90-91 7.78862440251515E-5 92-93 3.0358322928524124E-5 94-95 1.1087823260097234E-4 96-97 3.1351769804270274E-5 98-99 6.527489280883478E-6 100-101 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 201.0 20-21 725.0 22-23 1473.0 24-25 2930.0 26-27 5154.0 28-29 10152.0 30-31 21734.0 32-33 25518.0 34-35 33977.0 36-37 51546.0 38-39 62490.0 40-41 61192.0 42-43 68443.0 44-45 82213.0 46-47 82099.0 48-49 77248.0 50-51 70460.0 52-53 66854.0 54-55 72056.0 56-57 75205.0 58-59 76257.0 60-61 75817.0 62-63 72206.0 64-65 73688.0 66-67 80170.0 68-69 82820.0 70-71 82851.0 72-73 79642.0 74-75 80815.0 76-77 78352.0 78-79 86280.0 80-81 89475.0 82-83 86566.0 84-85 85732.0 86-87 92136.0 88-89 101192.0 90-91 109326.0 92-93 115208.0 94-95 131715.0 96-97 216677.0 98-99 945925.0 100-101 6853573.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 82.99184273178224 #Duplication Level Percentage of deduplicated Percentage of total 1 88.28452592561675 73.26895491268736 2 7.877086606756819 13.074678657051805 3 2.1311168668028704 5.30595947558257 4 0.7970828657925847 2.646055033682259 5 0.36810878095430616 1.5275013028573927 6 0.1859562412121902 0.925971067540527 7 0.11548518145403032 0.6709029611958954 8 0.06658943431450218 0.4421103888182007 9 0.04152440914324746 0.3101568509831916 >10 0.12987190417472436 1.5885238149818688 >50 0.002133546161618534 0.11683019318800839 >100 4.4072777102082013E-4 0.05965388212912483 >500 3.875662018699828E-5 0.018414363744485063 >1k 3.875322513259646E-5 0.04428709555725535 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.8924890233271036E-5 2 0.0 2.8387335349906553E-5 0.0 0.0 1.8924890233271036E-5 3 0.0 3.784978046654207E-5 0.0 9.462445116635518E-6 1.8924890233271036E-5 4 0.0 4.731222558317759E-5 9.462445116635518E-6 2.8387335349906553E-5 1.8924890233271036E-5 5 0.0 5.677467069981311E-5 9.462445116635518E-6 2.8387335349906553E-5 2.8387335349906553E-5 6 9.462445116635518E-5 5.677467069981311E-5 9.462445116635518E-6 2.8387335349906553E-5 3.784978046654207E-5 7 9.462445116635518E-5 5.677467069981311E-5 9.462445116635518E-6 2.8387335349906553E-5 4.731222558317759E-5 8 1.040868962829907E-4 5.677467069981311E-5 9.462445116635518E-6 2.8387335349906553E-5 5.677467069981311E-5 9 1.040868962829907E-4 1.3247423163289726E-4 9.462445116635518E-6 6.623711581644863E-5 7.569956093308414E-5 10-11 1.1354934139962621E-4 1.3247423163289726E-4 9.462445116635518E-6 6.623711581644863E-5 7.569956093308414E-5 12-13 1.2301178651626172E-4 1.3720545419121502E-4 9.462445116635518E-6 6.623711581644863E-5 8.04307834914019E-5 14-15 1.3247423163289726E-4 2.3182990535757018E-4 9.462445116635518E-6 1.040868962829907E-4 1.0881811884130846E-4 16-17 1.608615669828038E-4 2.412923504742057E-4 9.462445116635518E-6 1.040868962829907E-4 1.2301178651626172E-4 18-19 1.608615669828038E-4 2.7441090838243004E-4 9.462445116635518E-6 1.040868962829907E-4 1.277430090745795E-4 20-21 1.608615669828038E-4 3.122606888489721E-4 9.462445116635518E-6 1.1354934139962621E-4 1.5139912186616828E-4 22-23 1.6559278954112155E-4 3.217231339656076E-4 9.462445116635518E-6 1.3720545419121502E-4 1.6559278954112155E-4 24-25 1.7032401209943933E-4 3.501104693155142E-4 9.462445116635518E-6 1.7978645721607482E-4 1.8924890233271036E-4 26-27 1.7032401209943933E-4 3.595729144321497E-4 9.462445116635518E-6 2.3656112791588794E-4 1.8924890233271036E-4 28-29 1.7032401209943933E-4 3.595729144321497E-4 9.462445116635518E-6 5.015095911816824E-4 1.9871134744934587E-4 30-31 1.7032401209943933E-4 4.305412528069161E-4 9.462445116635518E-6 0.001277430090745795 1.9871134744934587E-4 32-33 1.750552346577571E-4 4.3527247536523383E-4 9.462445116635518E-6 0.002748840306382618 1.9871134744934587E-4 34-35 1.7978645721607485E-4 5.535530393231778E-4 9.462445116635518E-6 0.004295950082952525 1.9871134744934587E-4 36-37 1.7978645721607485E-4 6.623711581644862E-4 9.462445116635518E-6 0.0067467233681611245 1.9871134744934587E-4 38-39 1.7978645721607485E-4 6.718336032811217E-4 9.462445116635518E-6 0.010635788311098323 2.0344257000766365E-4 40-41 1.7978645721607485E-4 7.475331642142059E-4 9.462445116635518E-6 0.015225074192666548 2.081737925659814E-4 42-43 1.845176797743926E-4 7.806517221224303E-4 9.462445116635518E-6 0.01898166490397085 2.081737925659814E-4 44-45 1.939801248910281E-4 9.083947311970097E-4 9.462445116635518E-6 0.023078903639474027 2.1763623768261692E-4 46-47 1.9871134744934587E-4 0.0010408689628299069 9.462445116635518E-6 0.027961525319657954 2.2709868279925243E-4 48-49 1.9871134744934587E-4 0.0010408689628299069 9.462445116635518E-6 0.03295296511868319 2.4602357303252345E-4 50-51 2.55486018149159E-4 0.0011544183042295332 9.462445116635518E-6 0.037722037457467494 2.5548601814915896E-4 52-53 2.649484632657945E-4 0.0011544183042295332 9.462445116635518E-6 0.042046374875769926 2.649484632657945E-4 54-55 2.649484632657945E-4 0.0011686119719044865 9.462445116635518E-6 0.04651738019338021 2.791421309407478E-4 56-57 2.649484632657945E-4 0.0012017305298127109 9.462445116635518E-6 0.05100731040122376 3.169919114072899E-4 58-59 2.649484632657945E-4 0.0012064617523710286 9.462445116635518E-6 0.055554015279767124 3.501104693155142E-4 60-61 2.9333579861570106E-4 0.0012253866426042996 9.462445116635518E-6 0.060209538277151795 3.5484169187383193E-4 62-63 3.217231339656076E-4 0.0012726988681874773 9.462445116635518E-6 0.0647420494880202 3.784978046654207E-4 64-65 3.217231339656076E-4 0.0014193667674953277 9.462445116635518E-6 0.06903326834841442 3.784978046654207E-4 66-67 3.217231339656076E-4 0.0014477541028452342 9.462445116635518E-6 0.07340018676974172 3.8322902722373847E-4 68-69 3.217231339656076E-4 0.0014950663284284118 9.462445116635518E-6 0.07789484820014358 3.9742269489869173E-4 70-71 3.406480241988786E-4 0.0015281848863366362 9.462445116635518E-6 0.08243209063357032 4.0688514001532725E-4 72-73 4.163475851319628E-4 0.0015376473314532716 9.462445116635518E-6 0.08607986322603331 4.258100302485983E-4 74-75 4.163475851319628E-4 0.0015565722216865428 9.462445116635518E-6 0.08918354522428976 4.305412528069161E-4 76-77 4.2107880769028057E-4 0.0015991532247114026 9.462445116635518E-6 0.09169582440275649 4.3527247536523383E-4 78-79 4.258100302485983E-4 0.0016180781149446736 9.462445116635518E-6 0.09436896514820602 4.400036979235516E-4 80-81 4.400036979235516E-4 0.0016228093375029913 9.462445116635518E-6 0.0956132766810436 4.683910332734581E-4 82-83 4.494661430401871E-4 0.001627540560061309 9.462445116635518E-6 0.09616682972036678 4.920471460650469E-4 84-85 4.6365981071514037E-4 0.00164646545029458 9.462445116635518E-6 0.09667307053410676 5.015095911816824E-4 86-87 4.731222558317759E-4 0.0016559278954112156 9.462445116635518E-6 0.09681027598829797 5.109720362983179E-4 88-89 4.920471460650469E-4 0.0017410899014609353 9.462445116635518E-6 0.0968670506589978 5.204344814149534E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 10490 0.0 44.288357 1 GTATCAA 17140 0.0 33.88793 1 TCAACGC 19805 0.0 28.301764 4 ATCAACG 20145 0.0 27.75974 3 CAACGCA 20250 0.0 27.614754 5 AACGCAG 20995 0.0 26.737644 6 TATCAAC 21865 0.0 26.070654 2 GTACATG 29245 0.0 23.289555 1 TACATGG 28565 0.0 23.269053 2 ACGCAGA 24505 0.0 22.85516 7 ACATGGG 28700 0.0 22.451437 3 CGCAGAG 25250 0.0 22.18082 8 CATGGGG 19855 0.0 20.74299 4 GCAGAGT 31715 0.0 17.659332 9 AGAGTAC 27495 0.0 17.375568 10-11 GAGTACA 19830 0.0 17.129963 1 GAGTACT 17540 0.0 16.938826 12-13 CAGAGTA 30550 0.0 16.599916 10-11 ATGGGGG 12805 0.0 15.794222 5 AGTACAT 20700 0.0 15.51226 2 >>END_MODULE