##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138818_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 12310109 Sequences flagged as poor quality 0 Sequence length 19-101 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.442650020401935 34.0 31.0 34.0 31.0 34.0 2 32.64122998423491 34.0 31.0 34.0 31.0 34.0 3 32.72241082511942 34.0 31.0 34.0 31.0 34.0 4 36.17956242304597 37.0 35.0 37.0 35.0 37.0 5 35.99394172707975 37.0 35.0 37.0 35.0 37.0 6 36.05653743602108 37.0 35.0 37.0 35.0 37.0 7 36.05709957564145 37.0 35.0 37.0 35.0 37.0 8 36.040950490365276 37.0 35.0 37.0 35.0 37.0 9 37.90502334301021 39.0 38.0 39.0 35.0 39.0 10-11 37.77761882530854 39.0 37.5 39.0 35.0 39.0 12-13 37.780696092942804 39.0 38.0 39.0 35.0 39.0 14-15 39.1099563375109 40.0 38.5 41.0 36.0 41.0 16-17 39.08151775910352 40.0 38.0 41.0 36.0 41.0 18-19 39.14420205377547 40.0 38.5 41.0 36.0 41.0 20-21 39.16078190071711 40.0 39.0 41.0 36.0 41.0 22-23 39.120896275178374 40.0 39.0 41.0 36.0 41.0 24-25 39.09000108768235 40.0 39.0 41.0 36.0 41.0 26-27 38.999519395620126 40.0 39.0 41.0 35.5 41.0 28-29 38.93613953131028 40.0 38.0 41.0 35.0 41.0 30-31 38.80596195176159 40.0 38.0 41.0 35.0 41.0 32-33 38.677432873895214 40.0 38.0 41.0 35.0 41.0 34-35 38.6388091779982 40.0 38.0 41.0 35.0 41.0 36-37 38.58985292067572 40.0 38.0 41.0 35.0 41.0 38-39 38.51907424116855 40.0 38.0 41.0 34.5 41.0 40-41 38.4319504426729 40.0 38.0 41.0 34.0 41.0 42-43 38.44761300035899 40.0 38.0 41.0 34.0 41.0 44-45 38.385362944302756 40.0 38.0 41.0 34.0 41.0 46-47 38.333179144791146 40.0 38.0 41.0 34.0 41.0 48-49 38.286705685703595 40.0 38.0 41.0 34.0 41.0 50-51 38.224344919896716 40.0 38.0 41.0 34.0 41.0 52-53 37.96926062654145 40.0 37.0 41.0 33.0 41.0 54-55 37.816900329432315 40.0 37.0 41.0 33.0 41.0 56-57 37.71932485233012 39.0 36.5 41.0 33.0 41.0 58-59 37.58091873921454 39.0 36.0 41.0 33.0 41.0 60-61 37.39649913992935 39.0 36.0 40.5 32.5 41.0 62-63 37.1407624764845 39.0 35.0 40.0 32.0 41.0 64-65 36.900026365752055 38.5 35.0 40.0 32.0 41.0 66-67 36.63705977401687 38.0 35.0 40.0 31.0 41.0 68-69 36.39875406648693 37.0 35.0 40.0 31.0 41.0 70-71 36.0944576630796 37.0 35.0 39.5 31.0 41.0 72-73 35.81116042475988 36.0 34.5 39.0 31.0 41.0 74-75 35.369676923182354 36.0 34.0 39.0 30.5 40.0 76-77 33.45839674291911 34.5 32.0 36.5 27.5 39.0 78-79 34.642314535730755 35.0 34.0 37.0 30.0 39.0 80-81 34.622832159098614 35.0 34.0 37.0 30.0 39.0 82-83 34.3572628751006 35.0 34.0 36.0 30.0 39.0 84-85 34.07932177523011 35.0 34.0 36.0 30.0 37.0 86-87 33.85041450495723 35.0 34.0 36.0 30.0 37.0 88-89 33.71322492276107 35.0 34.0 35.0 30.0 36.5 90-91 33.544714564365776 35.0 33.0 35.0 30.0 36.0 92-93 33.50806812193575 35.0 33.0 35.0 30.0 36.0 94-95 33.37843078996693 35.0 33.0 35.0 30.0 36.0 96-97 33.403502591462555 35.0 33.0 35.0 30.0 35.5 98-99 33.506061596539624 35.0 33.0 35.0 30.0 35.0 100-101 32.22811242003274 33.5 31.0 34.5 27.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 14.0 20 44.0 21 230.0 22 981.0 23 3463.0 24 9133.0 25 20215.0 26 37654.0 27 61775.0 28 91547.0 29 127329.0 30 170342.0 31 223696.0 32 295474.0 33 405230.0 34 595493.0 35 933055.0 36 1678934.0 37 3025465.0 38 3378356.0 39 1234747.0 40 16931.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.12984629136915 20.110179365592945 13.219582377377812 24.540391965660096 2 14.816362791225135 21.17256424016355 41.19184453457188 22.81922843403944 3 18.33007577677695 26.057763545261352 30.262424206975886 25.34973647098581 4 12.43898787438202 17.544993510588462 38.896241957691004 31.119776657338516 5 12.998171739508704 38.02192872789755 35.93410008820427 13.045799444389475 6 30.406325111429332 38.07005888849788 18.56178580677697 12.961830193295814 7 26.529570128095536 32.30698444668524 23.673039775683545 17.490405649535678 8 24.28213267648564 37.41017240383493 21.339088061689786 16.96860685798964 9 25.752932000845806 16.086721896613586 21.256456786857044 36.90388931568356 10-11 24.34896085603145 26.617454265329993 29.23382844269813 19.79975643594043 12-13 24.869343093414038 24.208766729021082 29.3112981450255 21.61059203253938 14-15 21.903875480325077 25.589945103674665 26.71311526847331 25.793064147526945 16-17 21.76529418476079 28.628539071853666 27.425355879651786 22.180810863733754 18-19 21.798937767326024 28.064065070423016 28.841227157289996 21.29577000496096 20-21 22.491868819362402 27.373810421087803 28.66849535809649 21.46582540145331 22-23 22.215677199991017 27.306994071417673 28.54502287212429 21.93230585646703 24-25 21.987951831703977 27.355372129152478 28.65747821027106 21.99919782887249 26-27 22.0252640646623 27.54095497122385 28.527587253335323 21.906193710778524 28-29 21.931211696290546 27.650690096074793 28.521338652756977 21.896759554877683 30-31 22.200462598541826 27.52760205368246 28.41895711771049 21.852978230065222 32-33 21.98541558505745 27.689663938600116 28.396605287379955 21.92831518896248 34-35 22.05711690853379 27.67482824203254 28.454116701168246 21.81393814826542 36-37 22.09689725074635 27.622079827214257 28.37354350581246 21.907479416226938 38-39 21.954621714441917 27.749226360008656 28.447041410119144 21.849110515430283 40-41 22.171879943561613 27.588292673109716 28.339881400883815 21.89994598244486 42-43 22.050069440803068 27.707309369020024 28.210203318202005 22.032417871974904 44-45 22.174188669571365 27.781182543733323 28.056629163644015 21.987999623051298 46-47 22.176879127430013 27.771227347993783 27.87002537130176 22.181868153274444 48-49 22.146759313773117 27.857875615318473 27.838031855968453 22.157333214939957 50-51 22.083044087601014 27.9802797005691 27.7907256369471 22.145950574882786 52-53 22.279324485377156 27.880898797792803 27.633766739452593 22.206009977377448 54-55 22.246984509819924 27.791449111655858 27.73078823592398 22.230778142600233 56-57 22.237578945999527 27.90539988823199 27.703732674697672 22.15328849107081 58-59 22.189874609491255 27.974084763282804 27.707878519362012 22.12816210786393 60-61 22.28632522261823 27.895237813396374 27.669253224081885 22.149183739903506 62-63 22.261085733085345 27.90299157382028 27.641529005961107 22.194393687133267 64-65 22.236621502751884 27.90527083606748 27.661740147109448 22.196367514071184 66-67 22.27825357014857 27.946813847729413 27.51896031291374 22.255972269208275 68-69 22.220537707844016 27.95770319302207 27.586070065739634 22.235689033394276 70-71 22.204245691099374 27.76929980297298 27.620326208218632 22.406128297709014 72-73 22.263786124687915 27.800771045547435 27.641845408828107 22.293597420936546 74-75 22.144138733092905 27.926026863071655 27.588511593874564 22.34132280996087 76-77 22.246372018445406 27.889062004361737 27.522828630649098 22.341737346543756 78-79 22.192785762544727 27.912233123503515 27.51753620926613 22.377444904685625 80-81 22.156493501025775 27.9146876280742 27.566195298603496 22.362623572296524 82-83 22.249519389819145 27.891225047384243 27.628347501165447 22.230908061631162 84-85 22.341202305060484 27.895396761896706 27.5268895484394 22.23651138460341 86-87 22.18835835095411 27.914490710560585 27.61900320011551 22.278147738369793 88-89 22.213966703575 27.9126330450907 27.564570444897264 22.308829806437032 90-91 22.27179044147182 27.9320803299644 27.56604636700756 22.230082861556223 92-93 22.247578614279124 27.88643153800514 27.625230404113655 22.240759443602084 94-95 22.099405365331563 27.941008934510098 27.681691428121113 22.277894272037223 96-97 22.129511581643577 27.98145615100337 27.69189188422752 22.197140383125532 98-99 22.40104299896142 28.581768756378345 27.711632422665446 21.305555821994798 100-101 23.156231229617624 31.155909989424558 24.85920322908171 20.828655551876107 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2634.0 1 2297.5 2 3164.5 3 4711.5 4 6495.0 5 10648.0 6 14095.5 7 16311.0 8 17556.0 9 16815.0 10 14710.5 11 12553.0 12 13157.0 13 17087.0 14 26497.0 15 39220.0 16 48994.0 17 54191.5 18 55830.5 19 54792.5 20 52998.0 21 52739.5 22 55461.0 23 63088.5 24 76130.0 25 94144.5 26 116131.5 27 139358.0 28 162823.5 29 187113.5 30 209079.5 31 230626.0 32 255187.5 33 281057.0 34 306603.0 35 332498.0 36 361934.5 37 386661.0 38 404143.0 39 419437.5 40 434625.5 41 449677.0 42 461187.0 43 472579.0 44 486329.5 45 497878.5 46 503486.5 47 505767.0 48 505104.0 49 499344.0 50 490560.5 51 478765.5 52 461044.0 53 441807.0 54 420714.0 55 393665.0 56 362951.5 57 328613.5 58 292309.0 59 255454.5 60 215686.0 61 176897.0 62 142498.5 63 111815.5 64 84744.0 65 62916.0 66 47374.0 67 36343.0 68 27826.0 69 20713.0 70 15260.0 71 11115.0 72 8007.0 73 5772.0 74 4094.5 75 2782.0 76 1895.5 77 1276.0 78 884.5 79 625.5 80 447.5 81 327.5 82 246.5 83 169.0 84 117.5 85 82.0 86 61.5 87 50.0 88 34.0 89 21.0 90 15.0 91 11.0 92 9.0 93 6.0 94 3.0 95 2.0 96 2.0 97 2.0 98 1.5 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0010641660443461549 3 0.0021851959231230203 4 4.5491067544568457E-4 5 3.818000311776281E-4 6 5.280213197137409E-4 7 0.0 8 0.0 9 0.0 10-11 4.06170245933647E-6 12-13 8.245255992453031E-4 14-15 7.026745254652091E-4 16-17 1.0966596640208466E-4 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 5.689753586932424E-5 28-29 1.8706274084327883E-4 30-31 7.32951397789215E-5 32-33 0.0011468106135730626 34-35 0.0019602555125536156 36-37 0.0013639409908184996 38-39 7.602268483862244E-4 40-41 3.742266294846176E-5 42-43 5.858743926313406E-5 44-45 6.493257616327659E-4 46-47 3.4025740132152574E-5 48-49 0.0 50-51 0.0 52-53 0.0010498907198808788 54-55 0.003778271044739337 56-57 0.006563750247356962 58-59 0.00468274137313051 60-61 2.878375243526287E-4 62-63 4.5347124300775684E-5 64-65 1.1427987360463132E-4 66-67 1.7057867339674834E-4 68-69 0.0 70-71 1.1270212598003304E-4 72-73 9.480455850654759E-6 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86-87 1.016119258665808E-5 88-89 2.774668692996936E-4 90-91 9.365465760741695E-5 92-93 5.115670316038201E-4 94-95 2.9444693951048034E-4 96-97 0.0 98-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 254.0 20-21 768.0 22-23 1610.0 24-25 3516.0 26-27 6021.0 28-29 12475.0 30-31 26812.0 32-33 31680.0 34-35 41748.0 36-37 64108.0 38-39 77865.0 40-41 75358.0 42-43 85095.0 44-45 101126.0 46-47 101423.0 48-49 95693.0 50-51 86726.0 52-53 82314.0 54-55 88114.0 56-57 92741.0 58-59 93533.0 60-61 92726.0 62-63 88274.0 64-65 90835.0 66-67 96396.0 68-69 99910.0 70-71 101012.0 72-73 95861.0 74-75 97130.0 76-77 94764.0 78-79 103522.0 80-81 107111.0 82-83 103295.0 84-85 102521.0 86-87 107881.0 88-89 118667.0 90-91 127799.0 92-93 135494.0 94-95 161830.0 96-97 251063.0 98-99 1075444.0 100-101 7889594.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 81.61692001661582 #Duplication Level Percentage of deduplicated Percentage of total 1 87.63827296907648 71.52765915311461 2 8.145372956945412 13.296005062650384 3 2.2649282079745015 5.545693931808956 4 0.8693945584355798 2.8382922455487103 5 0.4182296935464097 1.7067309723375537 6 0.23716860994919825 1.1614182881205404 7 0.1261853249649478 0.7209200302454375 8 0.08482472526384198 0.5538506253832322 9 0.05044788854065592 0.37056611556268776 >10 0.16159338335853904 1.9814941972206561 >50 0.002939299598551078 0.15616712241884648 >100 5.513924447619564E-4 0.06346396149573873 >500 3.639667374303855E-5 0.021417853349392085 >1k 5.45932274107656E-5 0.05632044074320539 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.123404918672937E-6 2 0.0 4.874042951203763E-5 0.0 0.0 8.123404918672937E-6 3 0.0 4.874042951203763E-5 0.0 0.0 8.123404918672937E-6 4 0.0 1.4622128853611287E-4 0.0 8.123404918672937E-6 8.123404918672937E-6 5 0.0 1.4622128853611287E-4 0.0 8.123404918672937E-6 8.123404918672937E-6 6 0.0 1.4622128853611287E-4 0.0 8.123404918672937E-6 1.6246809837345875E-5 7 0.0 1.4622128853611287E-4 0.0 8.123404918672937E-6 1.6246809837345875E-5 8 0.0 1.6246809837345877E-4 0.0 8.123404918672937E-6 3.249361967469175E-5 9 0.0 2.59948957397534E-4 0.0 2.4370214756018814E-5 3.249361967469175E-5 10-11 0.0 2.59948957397534E-4 0.0 2.4370214756018814E-5 3.249361967469175E-5 12-13 0.0 2.59948957397534E-4 0.0 4.061702459336469E-5 3.249361967469175E-5 14-15 0.0 3.9398513855563747E-4 0.0 4.061702459336469E-5 3.6555322134028225E-5 16-17 0.0 4.305404606896657E-4 0.0 6.498723934938351E-5 4.061702459336469E-5 18-19 0.0 4.6709578282369394E-4 0.0 9.748085902407526E-5 4.061702459336469E-5 20-21 0.0 5.158362123357316E-4 0.0 1.1372766886142113E-4 4.061702459336469E-5 22-23 0.0 5.930085590631245E-4 0.0 1.421595860767764E-4 4.874042951203763E-5 24-25 0.0 6.701809057905173E-4 0.0 1.5028299099544934E-4 5.6863834430710564E-5 26-27 0.0 7.067362279245456E-4 0.0 2.3151704018217872E-4 5.6863834430710564E-5 28-29 0.0 7.229830377618914E-4 0.0 6.66119203331181E-4 5.6863834430710564E-5 30-31 8.123404918672937E-6 8.529575164606584E-4 0.0 0.0017871490821080463 6.092553689004703E-5 32-33 8.123404918672937E-6 8.529575164606584E-4 0.0 0.004094196079011161 6.49872393493835E-5 34-35 8.123404918672937E-6 9.666851853220796E-4 0.0 0.0066855622480678275 7.311064426805644E-5 36-37 8.123404918672937E-6 0.0010763511517241642 0.0 0.01022736679260923 7.311064426805644E-5 38-39 8.123404918672937E-6 0.001153523498451557 0.0 0.016393031125881988 7.311064426805644E-5 40-41 8.123404918672937E-6 0.0012956830845283337 0.0 0.02290394016819835 7.311064426805644E-5 42-43 8.123404918672937E-6 0.0013606703238777172 0.0 0.02878122362685822 7.311064426805644E-5 44-45 8.123404918672937E-6 0.0014743979927391382 0.0 0.03530025607409325 7.311064426805644E-5 46-47 8.123404918672937E-6 0.001567817149303877 0.0 0.042635690715654914 7.311064426805644E-5 48-49 8.123404918672937E-6 0.0015800022566818863 0.0 0.0493943636079908 9.748085902407526E-5 50-51 8.123404918672937E-6 0.001827766106701411 0.0 0.05607992585605863 9.748085902407526E-5 52-53 8.123404918672937E-6 0.001844012916538757 0.0 0.062473045527054225 1.0966596640208466E-4 54-55 8.123404918672937E-6 0.0018602597263761029 0.0 0.06861027794311164 1.2591277623943053E-4 56-57 8.123404918672937E-6 0.0019008767509694675 0.0 0.07446319118701548 1.3403618115810347E-4 58-59 8.123404918672937E-6 0.0019130618583474768 0.0 0.08002366185384711 1.421595860767764E-4 60-61 8.123404918672937E-6 0.0019618022878595143 0.0 0.08527138143130983 1.5028299099544934E-4 62-63 8.123404918672937E-6 0.0019983576099935427 0.0 0.0907140627268207 1.6246809837345877E-4 64-65 8.123404918672937E-6 0.0021364554936109826 0.0 0.09568558653704853 1.6246809837345877E-4 66-67 8.123404918672937E-6 0.0021689491132856746 0.0 0.10108765080796603 1.6246809837345877E-4 68-69 8.123404918672937E-6 0.002237998055094394 0.0 0.1065303321034769 1.6246809837345877E-4 70-71 8.123404918672937E-6 0.0022664299723097496 0.0 0.1117861750858583 1.705915032921317E-4 72-73 8.123404918672937E-6 0.002278615079687759 0.0 0.11607127118045826 1.7871490821080464E-4 74-75 8.123404918672937E-6 0.00232329380674046 0.0 0.11968618636926773 1.7871490821080464E-4 76-77 8.123404918672937E-6 0.0024045278559271894 0.0 0.12293148663427757 1.7871490821080464E-4 78-79 8.123404918672937E-6 0.0024451448805205543 0.0 0.12584372729762183 1.7871490821080464E-4 80-81 8.123404918672937E-6 0.0024492065829798907 0.0 0.12700537420099206 1.9090001558881404E-4 82-83 8.123404918672937E-6 0.0024654533928172365 0.0 0.1274765316862751 2.1120852788549638E-4 84-85 8.123404918672937E-6 0.0024817002026545827 0.0 0.12786239341991204 2.1120852788549638E-4 86-87 8.123404918672937E-6 0.002502008714951265 0.0 0.12802079981582615 2.1527023034483285E-4 88-89 8.123404918672937E-6 0.0025669959543006484 0.0 0.12808984875763488 2.1933193280416932E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 12430 0.0 47.05877 1 GTATCAA 20900 0.0 32.556145 1 TCAACGC 23995 0.0 27.47757 4 ATCAACG 24035 0.0 27.450178 3 CAACGCA 24430 0.0 27.0409 5 AACGCAG 25435 0.0 26.090916 6 TATCAAC 26715 0.0 25.067223 2 GTACATG 32430 0.0 23.845999 1 TACATGG 31735 0.0 23.717686 2 ACATGGG 31935 0.0 22.82794 3 ACGCAGA 29890 0.0 22.13021 7 CGCAGAG 30330 0.0 21.780806 8 CATGGGG 23600 0.0 20.265142 4 GCAGAGT 37495 0.0 17.55034 9 GAGTACT 22100 0.0 17.544426 12-13 AGAGTAC 32670 0.0 17.3777 10-11 CAGAGTA 36295 0.0 16.898191 10-11 ATGGGGG 15930 0.0 16.819986 5 GAGTACA 22275 0.0 16.161457 1 GTACTTT 25855 0.0 14.955265 14-15 >>END_MODULE