##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138814_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7759443 Sequences flagged as poor quality 0 Sequence length 19-101 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.44252544931382 33.0 31.0 34.0 31.0 34.0 2 32.63404319098677 34.0 31.0 34.0 31.0 34.0 3 32.71762290154074 34.0 31.0 34.0 31.0 34.0 4 36.17466356799064 37.0 35.0 37.0 35.0 37.0 5 35.98857727287899 37.0 35.0 37.0 35.0 37.0 6 36.058433446833746 37.0 35.0 37.0 35.0 37.0 7 36.06120851715774 37.0 35.0 37.0 35.0 37.0 8 36.049251731084304 37.0 35.0 37.0 35.0 37.0 9 37.91607309957686 39.0 38.0 39.0 35.0 39.0 10-11 37.78956073264537 39.0 37.5 39.0 35.0 39.0 12-13 37.79333245955928 39.0 38.0 39.0 35.0 39.0 14-15 39.12628702859213 40.0 39.0 41.0 36.0 41.0 16-17 39.096387459769986 40.0 38.0 41.0 36.0 41.0 18-19 39.161439551782266 40.0 39.0 41.0 36.0 41.0 20-21 39.17998271456618 40.0 39.0 41.0 36.0 41.0 22-23 39.13875172198573 40.0 39.0 41.0 36.0 41.0 24-25 39.10858756836881 40.0 39.0 41.0 36.0 41.0 26-27 39.018725547865174 40.0 39.0 41.0 36.0 41.0 28-29 38.95653768048798 40.0 38.5 41.0 35.0 41.0 30-31 38.82852357618286 40.0 38.0 41.0 35.0 41.0 32-33 38.70171041551309 40.0 38.0 41.0 35.0 41.0 34-35 38.66414011045547 40.0 38.0 41.0 35.0 41.0 36-37 38.61863875258156 40.0 38.0 41.0 35.0 41.0 38-39 38.55307388842304 40.0 38.0 41.0 35.0 41.0 40-41 38.46677851452385 40.0 38.0 41.0 34.0 41.0 42-43 38.488910887535745 40.0 38.0 41.0 34.0 41.0 44-45 38.4333760924539 40.0 38.0 41.0 34.0 41.0 46-47 38.38740530562194 40.0 38.0 41.0 34.0 41.0 48-49 38.35230603773046 40.0 38.0 41.0 34.0 41.0 50-51 38.29518635652812 40.0 38.0 41.0 34.0 41.0 52-53 38.04824109593949 40.0 37.0 41.0 33.0 41.0 54-55 37.90186199414044 40.0 37.0 41.0 33.0 41.0 56-57 37.81094527909554 39.5 37.0 41.0 33.0 41.0 58-59 37.684080976193954 39.0 36.5 41.0 33.0 41.0 60-61 37.50878510079836 39.0 36.0 41.0 33.0 41.0 62-63 37.26585135919969 39.0 35.5 40.0 32.0 41.0 64-65 37.033160860274165 39.0 35.0 40.0 32.0 41.0 66-67 36.77622814342659 38.0 35.0 40.0 32.0 41.0 68-69 36.54324062954181 37.5 35.0 40.0 31.5 41.0 70-71 36.239441025899225 37.0 35.0 39.5 31.0 41.0 72-73 35.955337177217004 36.5 35.0 39.0 31.0 41.0 74-75 35.50419099974569 36.0 34.0 39.0 31.0 40.0 76-77 33.5717662551515 34.5 32.0 36.5 28.0 39.0 78-79 34.76571667831942 35.0 34.0 37.0 30.0 39.0 80-81 34.73803234916146 35.0 34.0 37.0 31.0 39.0 82-83 34.463025111677034 35.0 34.0 36.5 30.5 39.0 84-85 34.179618508648886 35.0 34.0 36.0 30.0 37.5 86-87 33.93982506783706 35.0 34.0 36.0 30.0 37.0 88-89 33.79330277897024 35.0 34.0 35.0 30.0 37.0 90-91 33.618682141132794 35.0 34.0 35.0 30.0 36.0 92-93 33.5756096251759 35.0 34.0 35.0 30.0 36.0 94-95 33.4410268681363 35.0 33.0 35.0 30.0 36.0 96-97 33.4619611927699 35.0 33.0 35.0 30.0 36.0 98-99 33.5547515155166 35.0 33.0 35.0 30.0 35.0 100-101 32.334675601355656 34.0 31.5 34.5 27.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 5.0 19 7.0 20 28.0 21 136.0 22 562.0 23 1962.0 24 5387.0 25 11837.0 26 21674.0 27 35466.0 28 53459.0 29 75201.0 30 101013.0 31 133116.0 32 176508.0 33 241513.0 34 354554.0 35 552157.0 36 987782.0 37 1823941.0 38 2213175.0 39 954298.0 40 15662.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.98318100925543 20.23799904194154 13.227044776280977 24.551775172522046 2 14.730976468858259 21.39461711938987 41.27272073518273 22.601685676569137 3 18.393522590705963 26.076804856123797 30.325384781438984 25.20428777173125 4 12.320710962371049 17.70901557053782 39.08211693742221 30.888156529668926 5 12.932344237895316 38.045751656729706 36.06665865059638 12.955245454778602 6 30.13883911063891 38.257326939550715 18.718477802380153 12.885356147430224 7 26.298910888320204 32.436232858466774 23.723094557173756 17.541761696039266 8 24.014661877147624 37.592891654723154 21.526699790178238 16.865746677950984 9 25.524834707852094 16.264066892430296 21.459310932498635 36.751787467218975 10-11 24.108613473197334 26.834601841562716 29.35870070562415 19.698083979615806 12-13 24.583424432909567 24.38863404634902 29.523176924301747 21.50476459643967 14-15 21.706199513196363 25.835415057997785 26.87155300773263 25.586832421073225 16-17 21.53942126331226 28.89220485175758 27.650916100791097 21.917457784139067 18-19 21.548466816497008 28.3294625658053 29.033011776747376 21.08905884095031 20-21 22.23054354291076 27.639597457722687 28.871808057160642 21.258050942205912 22-23 21.9483452573022 27.591570957523214 28.715133950911465 21.744949834263117 24-25 21.69802819617716 27.63314442461005 28.86217484084394 21.806652538368848 26-27 21.744520642765437 27.83245820646718 28.69732852943674 21.725692621330637 28-29 21.697198605458762 27.934762324259488 28.733671996817968 21.634367073463785 30-31 21.928916395988463 27.78622506946445 28.65278532654367 21.632073208003423 32-33 21.681923469209433 27.928511414669995 28.61084775098958 21.778717365130994 34-35 21.805786319804945 28.003472192841052 28.627847241740362 21.56289424561364 36-37 21.807787060138704 27.958547466142363 28.55823277927151 21.675432694447426 38-39 21.675927546088644 28.033096361442965 28.603363580964867 21.68761251150352 40-41 21.93882017129713 27.926524561430956 28.496092677385526 21.638562589886394 42-43 21.770208303646626 28.024025046022512 28.387625367438048 21.818141282892814 44-45 21.894801120017995 28.10651485635575 28.19445463836223 21.804229385264023 46-47 21.873769281893676 28.08331020152296 28.04142932971734 22.001491186866026 48-49 21.886302768114934 28.146867635306304 28.01826725142083 21.94856234515793 50-51 21.81592793482576 28.279632152253974 27.932012074854445 21.972427838065823 52-53 22.01730711987413 28.201384853080835 27.83505081574508 21.946257211299947 54-55 21.960772775927666 28.13347945238428 27.913083933053535 21.992663838634517 56-57 21.964425611510332 28.195580837666434 27.870864208501768 21.969129342321462 58-59 21.96178160118367 28.247489279966935 27.87491795827725 21.915811160572144 60-61 22.009314381888473 28.23310718274029 27.848761448610116 21.90881698676112 62-63 21.9375694626471 28.268978674887833 27.84132858861629 21.952123273848777 64-65 21.981482566878487 28.22015968780901 27.837241707899494 21.961116037413003 66-67 22.007343169813364 28.24855563573215 27.68707131251703 22.057029881937456 68-69 21.968786836638614 28.275110995652447 27.7654475077803 21.99065465992864 70-71 21.965292417024806 28.074018540603912 27.792043819512667 22.16864522285861 72-73 21.96904437493224 28.119989115000525 27.83319111081642 22.07777539925082 74-75 21.91521828774132 28.22063456413345 27.7583874221146 22.105759726010625 76-77 21.971582817069468 28.143871781301723 27.77385527920545 22.11069012242336 78-79 21.973143027907465 28.17486685601568 27.70396478492903 22.148025331147824 80-81 21.948355801188306 28.206669026840974 27.739259618369307 22.105715553601417 82-83 21.996992146892264 28.18792031213392 27.798807148070477 22.016280392903344 84-85 22.10020135379166 28.161782339762485 27.725074525499917 22.012941780945933 86-87 21.938211490134247 28.179161351196775 27.828902592911298 22.053724565757683 88-89 21.995019628255708 28.164740553463496 27.760933738151493 22.079306080129303 90-91 22.024697827548103 28.19464241977193 27.758925621717683 22.02173413096228 92-93 21.999962748461883 28.16079753011452 27.810162906762837 22.02907681466076 94-95 21.90952918006543 28.235953642661816 27.830073120292038 22.02444405698071 96-97 21.89845615480587 28.22387186408644 27.88938067422816 21.988291306879525 98-99 22.191855845283065 28.764636129142673 27.940822239336928 21.102685786237334 100-101 26.105636052517546 35.788070002308956 28.6223791043171 9.483914840856398 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1812.0 1 1540.0 2 1933.0 3 2808.5 4 3954.0 5 6583.5 6 8802.5 7 10191.5 8 10876.0 9 10462.0 10 9316.5 11 8161.0 12 8558.0 13 10972.5 14 17073.5 15 25301.0 16 31716.5 17 35457.5 18 37317.0 19 37728.0 20 37375.0 21 37743.0 22 40396.5 23 46404.0 24 55887.0 25 68461.5 26 83538.5 27 98565.5 28 113504.0 29 129275.5 30 143321.0 31 158019.0 32 175556.5 33 192888.0 34 210218.0 35 227230.5 36 244168.5 37 259900.5 38 272868.5 39 284440.5 40 295508.0 41 305636.5 42 312474.5 43 317988.5 44 324525.5 45 329458.0 46 331566.0 47 332434.5 48 331446.5 49 326235.5 50 318739.0 51 308430.0 52 292962.5 53 277752.5 54 262168.0 55 242346.0 56 221793.5 57 199980.0 58 176107.0 59 153328.5 60 130626.0 61 107552.5 62 86446.5 63 68098.0 64 51915.5 65 39206.5 66 30141.0 67 23638.0 68 18137.5 69 13308.5 70 9805.0 71 7121.5 72 5187.0 73 3747.0 74 2657.5 75 1865.5 76 1283.0 77 867.0 78 597.5 79 439.5 80 316.5 81 214.0 82 160.5 83 116.0 84 86.5 85 65.0 86 44.5 87 31.5 88 22.0 89 16.0 90 12.5 91 11.0 92 10.0 93 7.0 94 3.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 8.505765168968958E-4 3 0.002165103861192099 4 5.799385342478835E-4 5 3.86625689498589E-4 6 3.86625689498589E-4 7 0.0 8 0.0 9 0.0 10-11 6.44376149164315E-6 12-13 9.85895508221402E-4 14-15 6.637074336392444E-4 16-17 9.665642237464725E-5 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 5.158359376062904E-5 28-29 1.548684843924832E-4 30-31 1.9392639342739496E-5 32-33 0.001018053657782495 34-35 0.0015491322255953095 36-37 0.0011780983659775664 38-39 5.674202843778507E-4 40-41 1.9970127352164808E-5 42-43 1.3430365034635567E-5 44-45 5.969341732197151E-4 46-47 6.862341296348425E-6 48-49 0.0 50-51 0.0 52-53 8.433783354815856E-4 54-55 0.0032927959137261697 56-57 0.006172361122055655 58-59 0.004207559880162841 60-61 1.332167834496797E-4 62-63 0.0 64-65 4.537657680768371E-5 66-67 1.9122004738738726E-4 68-69 0.0 70-71 1.410537704025463E-4 72-73 7.931360106115253E-6 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86-87 0.0 88-89 2.9814095086970347E-4 90-91 1.1569973284931685E-4 92-93 6.329104768022035E-4 94-95 4.0462821104671805E-4 96-97 0.0 98-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 159.0 20-21 542.0 22-23 1157.0 24-25 2376.0 26-27 4608.0 28-29 10133.0 30-31 23493.0 32-33 27159.0 34-35 37117.0 36-37 57500.0 38-39 67857.0 40-41 64824.0 42-43 71248.0 44-45 83909.0 46-47 83527.0 48-49 79467.0 50-51 72352.0 52-53 68789.0 54-55 74170.0 56-57 77014.0 58-59 76754.0 60-61 75318.0 62-63 70789.0 64-65 72939.0 66-67 77551.0 68-69 78557.0 70-71 77540.0 72-73 73408.0 74-75 72786.0 76-77 72057.0 78-79 77893.0 80-81 79203.0 82-83 74631.0 84-85 73371.0 86-87 76940.0 88-89 82655.0 90-91 87574.0 92-93 90163.0 94-95 104148.0 96-97 153920.0 98-99 629445.0 100-101 4574400.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 87.4713704225924 #Duplication Level Percentage of deduplicated Percentage of total 1 90.8790679210183 79.49316613779325 2 6.67775230358008 11.682242906735455 3 1.4838710870759577 3.8938871255098784 4 0.48819441905102057 1.708121394682165 5 0.19782743120947596 0.8652118257536994 6 0.08737294452868287 0.45855787174686224 7 0.05978698906346126 0.36607549067750506 8 0.03307720501010422 0.23146467615862842 9 0.020282886855923433 0.1596754718472608 >10 0.07085902649030817 0.9791198096939503 >50 0.0016353083170554256 0.09455433051413192 >100 2.2959549688306803E-4 0.03892793441592269 >500 4.2882302771166896E-5 0.028995024471292683 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 2.57750459665726E-5 0.0 1.28875229832863E-5 1.28875229832863E-5 3 0.0 2.57750459665726E-5 0.0 1.28875229832863E-5 1.28875229832863E-5 4 0.0 7.73251378997178E-5 0.0 1.28875229832863E-5 1.28875229832863E-5 5 0.0 7.73251378997178E-5 0.0 2.57750459665726E-5 1.28875229832863E-5 6 0.0 7.73251378997178E-5 0.0 2.57750459665726E-5 1.28875229832863E-5 7 0.0 7.73251378997178E-5 0.0 2.57750459665726E-5 1.28875229832863E-5 8 0.0 7.73251378997178E-5 0.0 2.57750459665726E-5 1.28875229832863E-5 9 0.0 1.675377987827219E-4 0.0 3.86625689498589E-5 1.28875229832863E-5 10-11 0.0 1.8042532176600821E-4 0.0 1.159877068495767E-4 1.28875229832863E-5 12-13 0.0 1.8042532176600821E-4 0.0 1.159877068495767E-4 1.28875229832863E-5 14-15 0.0 2.5130669817408286E-4 0.0 1.2243146834121986E-4 1.28875229832863E-5 16-17 0.0 2.57750459665726E-4 0.0 1.546502757994356E-4 1.28875229832863E-5 18-19 0.0 2.7708174414065544E-4 0.0 1.8686908325765136E-4 1.28875229832863E-5 20-21 0.0 3.093005515988712E-4 0.0 1.933128447492945E-4 2.57750459665726E-5 22-23 0.0 3.4151935905708694E-4 0.0 2.1908789071586708E-4 2.57750459665726E-5 24-25 0.0 3.86625689498589E-4 0.0 2.448629366824397E-4 2.57750459665726E-5 26-27 0.0 4.2528825844844793E-4 0.0 3.093005515988712E-4 2.57750459665726E-5 28-29 0.0 4.2528825844844793E-4 0.0 7.73251378997178E-4 2.57750459665726E-5 30-31 0.0 4.639508273983068E-4 0.0 0.0018171407406433683 2.57750459665726E-5 32-33 0.0 4.639508273983068E-4 0.0 0.0038984757024441057 3.86625689498589E-5 34-35 6.44376149164315E-6 5.477197267896678E-4 0.0 0.006611299290425872 3.86625689498589E-5 36-37 1.28875229832863E-5 6.057135802144561E-4 0.0 0.01078041297551899 3.86625689498589E-5 38-39 1.28875229832863E-5 6.44376149164315E-4 0.0 0.01728861208207857 3.86625689498589E-5 40-41 1.28875229832863E-5 7.474763330306054E-4 0.0 0.02438319348437768 3.86625689498589E-5 42-43 1.28875229832863E-5 7.73251378997178E-4 0.0 0.030504766901438676 3.86625689498589E-5 44-45 1.28875229832863E-5 8.699078013718253E-4 0.0 0.0373029352751222 3.86625689498589E-5 46-47 1.28875229832863E-5 9.536767007631862E-4 0.0 0.04502256154211069 3.86625689498589E-5 48-49 1.28875229832863E-5 9.601204622548293E-4 0.0 0.05206559285247665 3.86625689498589E-5 50-51 1.28875229832863E-5 0.0010567768846294766 0.0 0.05964990012814064 3.86625689498589E-5 52-53 1.28875229832863E-5 0.0010567768846294766 0.0 0.06658338749314867 3.86625689498589E-5 54-55 1.28875229832863E-5 0.0010632206461211199 0.0 0.07357486871158148 3.86625689498589E-5 56-57 1.28875229832863E-5 0.0010696644076127629 0.0 0.08036014956228173 3.86625689498589E-5 58-59 1.28875229832863E-5 0.0011018832150709785 0.0 0.0868232423383998 3.86625689498589E-5 60-61 1.28875229832863E-5 0.0011534333070041239 0.0 0.09385982988727412 3.86625689498589E-5 62-63 1.28875229832863E-5 0.0012114271604289123 0.0 0.10011027853416798 3.86625689498589E-5 64-65 1.28875229832863E-5 0.001282308536836987 0.0 0.10608364543692118 3.86625689498589E-5 66-67 1.28875229832863E-5 0.0013016398213119163 0.0 0.1123598691297816 3.86625689498589E-5 68-69 1.28875229832863E-5 0.0013209711057868456 0.0 0.11897116842020748 3.86625689498589E-5 70-71 1.28875229832863E-5 0.0013660774362283478 0.0 0.1255180300957169 3.86625689498589E-5 72-73 1.28875229832863E-5 0.0013854087207032773 0.0 0.13078902699588102 3.86625689498589E-5 74-75 1.28875229832863E-5 0.0014176275281614931 0.0 0.13501613453439892 3.86625689498589E-5 76-77 1.28875229832863E-5 0.0015013964275528541 0.0 0.13916591693501712 3.86625689498589E-5 78-79 1.28875229832863E-5 0.001546502757994356 0.0 0.14273576080138742 3.86625689498589E-5 80-81 1.28875229832863E-5 0.001546502757994356 0.0 0.14442402631219792 3.86625689498589E-5 82-83 1.28875229832863E-5 0.0015658340424692854 0.0 0.1450941775073288 3.86625689498589E-5 84-85 1.28875229832863E-5 0.001591609088435858 0.0 0.1457063348490349 3.86625689498589E-5 86-87 1.28875229832863E-5 0.00163671541887736 0.0 0.14589320393229255 3.86625689498589E-5 88-89 1.28875229832863E-5 0.0017011530337937917 0.0 0.1459898603546672 3.86625689498589E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 7940 0.0 44.869556 1 GTATCAA 13325 0.0 32.340557 1 TCAACGC 15155 0.0 27.526087 4 CAACGCA 15420 0.0 27.134197 5 ATCAACG 15380 0.0 27.09697 3 AACGCAG 15995 0.0 26.185007 6 TATCAAC 16715 0.0 25.282352 2 ACGCAGA 18905 0.0 22.066006 7 GTACATG 19745 0.0 21.973064 1 CGCAGAG 19035 0.0 21.827644 8 TACATGG 19505 0.0 21.580406 2 ACATGGG 19775 0.0 20.694939 3 CATGGGG 14040 0.0 18.688908 4 GAGTACT 14255 0.0 17.441324 12-13 GCAGAGT 23585 0.0 17.422222 9 CAGAGTA 22955 0.0 16.528316 10-11 AGAGTAC 20940 0.0 16.345758 10-11 GTACTTT 16275 0.0 15.302736 14-15 GAGTACA 13820 0.0 15.153399 1 AGTACTT 15680 0.0 14.353103 12-13 >>END_MODULE