##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138810_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 8177931 Sequences flagged as poor quality 0 Sequence length 19-101 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.471289376249324 34.0 31.0 34.0 31.0 34.0 2 32.66359315088376 34.0 31.0 34.0 31.0 34.0 3 32.7433706642915 34.0 31.0 34.0 31.0 34.0 4 36.19702831926559 37.0 37.0 37.0 35.0 37.0 5 36.01668111408619 37.0 35.0 37.0 35.0 37.0 6 36.086334673158774 37.0 35.0 37.0 35.0 37.0 7 36.08861226635441 37.0 35.0 37.0 35.0 37.0 8 36.07841396558616 37.0 35.0 37.0 35.0 37.0 9 37.941082652812796 39.0 38.0 39.0 35.0 39.0 10-11 37.816461889932796 39.0 38.0 39.0 35.0 39.0 12-13 37.82285971843001 39.0 38.0 39.0 35.0 39.0 14-15 39.156608132301436 40.0 39.0 41.0 36.0 41.0 16-17 39.13107679680839 40.0 39.0 41.0 36.0 41.0 18-19 39.20020503963656 40.0 39.0 41.0 36.0 41.0 20-21 39.22126707285928 40.0 39.0 41.0 36.0 41.0 22-23 39.18052226399013 40.0 39.0 41.0 36.0 41.0 24-25 39.1506944500609 40.0 39.0 41.0 36.0 41.0 26-27 39.06413073137864 40.0 39.0 41.0 36.0 41.0 28-29 39.00281571959674 40.0 39.0 41.0 36.0 41.0 30-31 38.87198653911659 40.0 38.0 41.0 35.0 41.0 32-33 38.73862542981366 40.0 38.0 41.0 35.0 41.0 34-35 38.70422737040663 40.0 38.0 41.0 35.0 41.0 36-37 38.65755447702118 40.0 38.0 41.0 35.0 41.0 38-39 38.589733950122174 40.0 38.0 41.0 35.0 41.0 40-41 38.502108204655315 40.0 38.0 41.0 34.0 41.0 42-43 38.52442859833587 40.0 38.0 41.0 34.0 41.0 44-45 38.46651792649406 40.0 38.0 41.0 34.0 41.0 46-47 38.41791348562991 40.0 38.0 41.0 34.0 41.0 48-49 38.376044627661535 40.0 38.0 41.0 34.0 41.0 50-51 38.316883138261616 40.0 38.0 41.0 34.0 41.0 52-53 38.06924346344174 40.0 37.0 41.0 33.0 41.0 54-55 37.92491175703829 40.0 37.0 41.0 33.0 41.0 56-57 37.83293956105892 39.5 37.0 41.0 33.0 41.0 58-59 37.70137231206229 39.0 36.5 41.0 33.0 41.0 60-61 37.519492999501324 39.0 36.0 41.0 33.0 41.0 62-63 37.271416473565225 39.0 35.5 40.0 32.5 41.0 64-65 37.03424241933433 38.5 35.0 40.0 32.0 41.0 66-67 36.77340766428415 38.0 35.0 40.0 32.0 41.0 68-69 36.52992525423014 37.5 35.0 40.0 31.5 41.0 70-71 36.22042667064966 37.0 35.0 39.5 31.0 41.0 72-73 35.929165662707604 36.5 35.0 39.0 31.0 41.0 74-75 35.476644874732386 36.0 34.0 39.0 31.0 40.0 76-77 33.54386240257662 34.5 32.0 36.5 28.0 39.0 78-79 34.73525823551064 35.0 34.0 37.0 30.0 39.0 80-81 34.70604977314133 35.0 34.0 37.0 31.0 39.0 82-83 34.43225412888747 35.0 34.0 36.5 30.5 39.0 84-85 34.15084590425011 35.0 34.0 36.0 30.0 37.0 86-87 33.921001622471216 35.0 34.0 36.0 30.0 37.0 88-89 33.780310925006816 35.0 34.0 35.0 30.0 36.5 90-91 33.61499680368367 35.0 34.0 35.0 30.0 36.0 92-93 33.57450073401141 35.0 34.0 35.0 30.0 36.0 94-95 33.44562923295082 35.0 33.0 35.0 30.0 36.0 96-97 33.46433967141455 35.0 33.0 35.0 30.0 35.5 98-99 33.558618714209125 35.0 33.0 35.0 30.0 35.0 100-101 32.279515480447095 34.0 31.5 34.5 27.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 10.0 20 31.0 21 130.0 22 533.0 23 2080.0 24 5360.0 25 11987.0 26 22437.0 27 36840.0 28 55386.0 29 78098.0 30 104276.0 31 137822.0 32 182741.0 33 252922.0 34 375372.0 35 589301.0 36 1069122.0 37 1992048.0 38 2328454.0 39 918417.0 40 14563.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.74067988590268 20.24245496813314 13.966491035446497 24.050374110517687 2 14.504623943551056 21.161517891949345 41.96899485293722 22.364863311562377 3 18.156251027941543 26.30603450753147 30.39246364923559 25.14525081529139 4 12.403188930965639 18.087120760516772 39.23906991918354 30.270620389334052 5 13.097816616847469 37.98850683640859 35.85233626460567 13.061340282138273 6 29.726878271319794 38.31328415684629 19.009935567747778 12.94990200408614 7 26.33985295302687 32.657991367254134 23.543754526664507 17.458401153054485 8 24.017725265718187 37.381961280915675 21.388710665325984 17.211602788040153 9 25.56982933702913 16.79862547140591 21.373975887055053 36.25756930450991 10-11 23.998790158537656 26.889246191976916 29.333446320346795 19.77851732913863 12-13 24.836454489360644 24.43256451637754 29.313580862246614 21.417400132015203 14-15 21.943626298450326 25.855248311189943 26.871667799703676 25.329457590656055 16-17 21.616539215773788 28.92018643858262 27.532828942710502 21.930445402933092 18-19 21.60086090234804 28.277042200527248 29.061360385652556 21.060736511472157 20-21 22.428232623436315 27.476792494602847 28.876118233165766 21.21885664879507 22-23 22.122520374548536 27.424605212357456 28.71112368840812 21.74175072468589 24-25 21.844303604625612 27.527889335936973 28.808871991209323 21.81893506822809 26-27 21.83531307283905 27.718957235705677 28.68022715986724 21.765502531588034 28-29 21.77174234028372 27.82870678944479 28.680044163688713 21.71950670658278 30-31 22.08641800875269 27.63734729611566 28.579467317484013 21.696767377647635 32-33 21.881831687378543 27.811484387558817 28.530208010209524 21.77647591485312 34-35 21.976460920133324 27.833468089333337 28.531070016061616 21.659000974471727 36-37 21.96977074810251 27.755727149336757 28.52326815098913 21.751233951571606 38-39 21.84608620532374 27.882020377145178 28.56684783340171 21.705045584129376 40-41 22.105985113471558 27.722839139986537 28.43001074728123 21.741164999260672 42-43 21.92103390880343 27.846804007576488 28.27612397254193 21.956038111078147 44-45 22.06824365448686 27.942693503328258 28.10544632183925 21.883616520345633 46-47 22.065683951564345 27.882994419836184 27.90960897610387 22.141712652495606 48-49 22.05633296415537 27.991220177424115 27.89695352679508 22.05549333162543 50-51 22.059350660476674 28.109513302824862 27.75427024856502 22.076865788133443 52-53 22.229657559637435 28.014595262510483 27.63706302316578 22.118684154686296 54-55 22.16166310224203 27.904678514568147 27.73278794695024 22.200870436239583 56-57 22.181270310487065 27.987792974252596 27.707160135628524 22.12377657963182 58-59 22.139586650582153 28.087821488086252 27.67665525378623 22.095936607545365 60-61 22.250038912937 28.043621299159494 27.64188565142734 22.06445413647617 62-63 22.20934958925925 28.027874646772684 27.636109333539 22.126666430429072 64-65 22.161252072140222 28.045905832520564 27.625578431559607 22.167263663779607 66-67 22.248874179018006 28.05371855382456 27.448816527460167 22.248590739697264 68-69 22.18025341383724 28.04569559527814 27.55141177037665 22.22263922050797 70-71 22.193477113108884 27.838301737086912 27.60655545867377 22.36166569113043 72-73 22.233520026519297 27.907136782872094 27.58754208064021 22.271801109968397 74-75 22.192777055996274 27.979267748246194 27.53630759934173 22.2916475964158 76-77 22.182867701204124 27.958875157283213 27.503740420957552 22.35451672055511 78-79 22.184770771780208 27.96686788573218 27.494245795411693 22.354115547075917 80-81 22.18900908024368 27.958957151576158 27.50839013780987 22.343643630370295 82-83 22.23667383331206 27.9475919583217 27.573387200589888 22.242347007776356 84-85 22.370651096889112 27.938191354481866 27.46457907500827 22.22657847362075 86-87 22.16213838888565 27.959911638764943 27.556568608008874 22.321381364340528 88-89 22.225290978703114 27.91947050385264 27.517316848052157 22.337921669392085 90-91 22.24561221469892 27.94097205567525 27.545272768860652 22.26814296076518 92-93 22.303201878697852 27.90473813387958 27.517817337079293 22.27424265034328 94-95 22.116155388444596 27.968807226237256 27.586111400815376 22.328925984502774 96-97 22.13281593984983 27.9751384612003 27.606644145613856 22.285401453336018 98-99 22.366700567263223 28.572799794181126 27.65156174284431 21.40893789571134 100-101 23.14397449579619 31.155961041087956 24.75241503159241 20.94764943152345 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1819.0 1 1580.0 2 2030.5 3 2948.5 4 4154.5 5 6650.0 6 8635.5 7 9951.5 8 10746.5 9 10474.0 10 9521.5 11 8655.0 12 9373.5 13 12357.0 14 19322.0 15 28547.0 16 35700.5 17 39519.0 18 40245.0 19 38839.5 20 36611.0 21 34748.5 22 35295.0 23 39898.5 24 48370.5 25 60716.0 26 76952.5 27 95084.0 28 113594.5 29 132509.5 30 150015.5 31 166518.0 32 184261.5 33 201905.0 34 218393.5 35 235096.5 36 253528.0 37 270331.0 38 283312.5 39 293979.5 40 304885.5 41 315679.5 42 322871.0 43 328550.0 44 335019.0 45 341098.5 46 344639.0 47 347196.0 48 347735.0 49 343262.5 50 334931.5 51 324059.0 52 309622.5 53 292154.0 54 273720.5 55 252050.0 56 229614.5 57 206832.5 58 182607.5 59 157693.0 60 131673.5 61 107468.0 62 85891.5 63 67113.0 64 50811.5 65 37775.0 66 28298.5 67 21472.0 68 16520.0 69 12185.5 70 8750.5 71 6330.5 72 4542.5 73 3173.5 74 2208.5 75 1550.0 76 1043.5 77 693.0 78 482.5 79 346.5 80 245.0 81 163.5 82 117.0 83 88.0 84 65.0 85 53.5 86 45.5 87 32.0 88 18.5 89 10.0 90 6.0 91 4.0 92 3.5 93 3.0 94 2.5 95 2.0 96 2.0 97 1.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 7.703660008870214E-4 3 0.002201045716820061 4 2.2010457168200614E-4 5 3.179288257628977E-4 6 4.768932386443466E-4 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0010393826996094734 14-15 7.031118262064085E-4 16-17 1.2228031760111452E-4 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 4.894260421272242E-5 28-29 2.326203519545925E-4 30-31 3.6778563197616554E-5 32-33 0.001345733664805765 34-35 0.0020587441056892654 36-37 0.0013744263704625124 38-39 7.975725878289426E-4 40-41 5.648532846940262E-5 42-43 4.426107432629429E-5 44-45 6.953291994630272E-4 46-47 1.288840331113392E-5 48-49 0.0 50-51 0.0 52-53 0.001139807004167055 54-55 0.003796917330948941 56-57 0.006288824805554193 58-59 0.004701391461973306 60-61 2.408398788451549E-4 62-63 2.7792650705995865E-5 64-65 1.262643090781934E-4 66-67 2.409228421922788E-4 68-69 0.0 70-71 9.413801153871332E-5 72-73 1.464183509047556E-5 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86-87 1.5877456520379192E-5 88-89 3.8605057712952736E-4 90-91 1.2236088973986809E-4 92-93 4.7202408482189997E-4 94-95 2.356910491021055E-4 96-97 0.0 98-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 147.0 20-21 549.0 22-23 1163.0 24-25 2438.0 26-27 4113.0 28-29 8120.0 30-31 19242.0 32-33 23452.0 34-35 31477.0 36-37 48393.0 38-39 58051.0 40-41 57835.0 42-43 66174.0 44-45 77848.0 46-47 78665.0 48-49 72610.0 50-51 66635.0 52-53 64259.0 54-55 69096.0 56-57 71484.0 58-59 71755.0 60-61 71119.0 62-63 68275.0 64-65 70348.0 66-67 74879.0 68-69 75994.0 70-71 75593.0 72-73 73271.0 74-75 73825.0 76-77 72585.0 78-79 77552.0 80-81 80206.0 82-83 76502.0 84-85 76418.0 86-87 79966.0 88-89 85839.0 90-91 91231.0 92-93 94398.0 94-95 111310.0 96-97 165767.0 98-99 689857.0 100-101 4999490.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 85.69744308430124 #Duplication Level Percentage of deduplicated Percentage of total 1 89.87437630904886 77.02004248481786 2 7.140392916989382 12.238268312064905 3 1.7187896916898042 4.41887645332412 4 0.6296371424047625 2.1583317269997684 5 0.2549563737572212 1.0924554664519648 6 0.1348755508026438 0.6935093903024008 7 0.07621819162431143 0.4572192897098955 8 0.047043002251961105 0.3225172006401673 9 0.0265175346339633 0.20452364235270512 >10 0.0951451760750105 1.2234584343473596 >50 0.0016247424034865512 0.09393138672169485 >100 4.014638909533284E-4 0.06473980102051297 >500 2.1904427672429696E-5 0.01212641124663945 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.2228031760111451E-5 2 0.0 4.8912127040445806E-5 0.0 0.0 1.2228031760111451E-5 3 0.0 4.8912127040445806E-5 0.0 0.0 1.2228031760111451E-5 4 0.0 6.114015880055726E-5 0.0 0.0 1.2228031760111451E-5 5 0.0 6.114015880055726E-5 0.0 0.0 1.2228031760111451E-5 6 7.33681905606687E-5 6.114015880055726E-5 0.0 0.0 1.2228031760111451E-5 7 7.33681905606687E-5 6.114015880055726E-5 0.0 0.0 2.4456063520222903E-5 8 7.33681905606687E-5 6.114015880055726E-5 0.0 0.0 4.8912127040445806E-5 9 7.33681905606687E-5 1.3450834936122596E-4 0.0 3.668409528033435E-5 4.8912127040445806E-5 10-11 7.33681905606687E-5 1.3450834936122596E-4 0.0 3.668409528033435E-5 4.8912127040445806E-5 12-13 7.33681905606687E-5 1.3450834936122596E-4 0.0 4.8912127040445806E-5 5.5026142920501536E-5 14-15 7.33681905606687E-5 2.0787653992189467E-4 0.0 8.559622232078016E-5 9.171023820083587E-5 16-17 9.782425408089161E-5 2.323326034421176E-4 0.0 1.2228031760111452E-4 1.1005228584100306E-4 18-19 9.782425408089161E-5 2.812447304825634E-4 0.0 1.2228031760111452E-4 1.467363811213374E-4 20-21 9.782425408089161E-5 3.179288257628977E-4 0.0 1.3450834936122596E-4 1.5896441288144886E-4 22-23 1.0393826996094733E-4 3.3015685752300916E-4 0.0 1.711924446415603E-4 1.711924446415603E-4 24-25 1.1005228584100306E-4 3.729549686833993E-4 0.0 2.2010457168200612E-4 1.8342047640167178E-4 26-27 1.1005228584100306E-4 4.035250480836779E-4 0.0 2.6901669872245193E-4 1.895344922817275E-4 28-29 1.1005228584100306E-4 4.096390639637336E-4 0.0 5.991735562454611E-4 2.0176252404183895E-4 30-31 1.1005228584100306E-4 5.13577333924681E-4 0.0 0.0016752403511352688 2.0787653992189467E-4 32-33 1.1005228584100306E-4 5.196913498047367E-4 0.0 0.0036011553533528227 2.139905558019504E-4 34-35 1.1005228584100306E-4 5.930595403654054E-4 0.0 0.006230182181776784 2.3233260344211756E-4 36-37 1.1005228584100306E-4 6.603137150460183E-4 0.0 0.010033100059171445 2.3233260344211756E-4 38-39 1.1005228584100306E-4 6.847697785662413E-4 0.0 0.016128773891587005 2.3233260344211756E-4 40-41 1.1005228584100306E-4 7.459099373667986E-4 0.0 0.022548490565645514 2.4456063520222903E-4 42-43 1.1005228584100306E-4 7.825940326471329E-4 0.0 0.027696491936652436 2.4456063520222903E-4 44-45 1.1005228584100306E-4 8.987603343681917E-4 0.0 0.03360263127678627 2.4456063520222903E-4 46-47 1.1005228584100306E-4 9.782425408089161E-4 0.0 0.040456443078328734 2.629026828423962E-4 48-49 1.1005228584100306E-4 9.843565566889719E-4 0.0 0.04756704354683355 2.934727622426748E-4 50-51 1.1005228584100306E-4 0.0011494349854504764 0.0 0.05402344431617239 2.9958677812273054E-4 52-53 1.1005228584100306E-4 0.0011616630172105878 0.0 0.06092005422887525 3.362708734030649E-4 54-55 1.1005228584100306E-4 0.0011738910489706993 0.0 0.06790226036389889 3.6684095280334355E-4 56-57 1.1005228584100306E-4 0.0012105751442510336 0.0 0.07426083687915684 3.6684095280334355E-4 58-59 1.1005228584100306E-4 0.0012166891601310893 0.0 0.08047267701329346 3.6684095280334355E-4 60-61 1.2839433348117024E-4 0.0012289171918912008 0.0 0.08670897321095031 3.729549686833993E-4 62-63 1.467363811213374E-4 0.0012533732554114237 0.0 0.09279241901160576 3.79068984563455E-4 64-65 1.467363811213374E-4 0.0013695395571324826 0.0 0.09888809284402131 3.79068984563455E-4 66-67 1.467363811213374E-4 0.0013756535730125384 0.0 0.10503879281935737 3.851830004435107E-4 68-69 1.467363811213374E-4 0.0014123376682928727 0.0 0.11109166854061253 3.9129701632356645E-4 70-71 1.467363811213374E-4 0.0014306797159330399 0.0 0.11715677229362781 4.035250480836779E-4 72-73 1.467363811213374E-4 0.0014306797159330399 0.0 0.12202352893415216 4.4020914336401223E-4 74-75 1.467363811213374E-4 0.0014551357794532628 0.0 0.12617494571671 4.4020914336401223E-4 76-77 1.5285039700139313E-4 0.0014979338906136528 0.0 0.1300695738323055 4.4020914336401223E-4 78-79 1.5896441288144886E-4 0.00151627593825382 0.0 0.13385414966206 4.4020914336401223E-4 80-81 1.5896441288144886E-4 0.0015223899541338757 0.0 0.13540710969559416 4.4632315924406795E-4 82-83 1.5896441288144886E-4 0.0015285039700139314 0.0 0.13597571317243934 4.7689323864434657E-4 84-85 1.5896441288144886E-4 0.0015407320017740429 0.0 0.13652597460164434 4.7689323864434657E-4 86-87 1.5896441288144886E-4 0.0015529600335341543 0.0 0.1367399651574463 4.7689323864434657E-4 88-89 1.5896441288144886E-4 0.001626328224094823 0.0 0.13680721933212692 4.7689323864434657E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 8795 0.0 44.883327 1 GTATCAA 15400 0.0 36.783833 1 TCAACGC 18295 0.0 30.151632 4 ATCAACG 18260 0.0 30.140131 3 CAACGCA 18650 0.0 29.53205 5 TATCAAC 19455 0.0 28.746487 2 AACGCAG 19220 0.0 28.744469 6 ACGCAGA 22320 0.0 24.771332 7 CGCAGAG 22625 0.0 24.418655 8 GTACATG 23145 0.0 22.020061 1 TACATGG 22780 0.0 21.479458 2 ACATGGG 22675 0.0 21.092741 3 GCAGAGT 27415 0.0 20.075712 9 CATGGGG 16615 0.0 18.475838 4 GTGGTAT 4805 0.0 18.177956 1 GAGTACT 15810 0.0 18.022732 12-13 AGAGTAC 24705 0.0 17.858366 10-11 CAGAGTA 26995 0.0 17.325138 10-11 GTACTTT 17815 0.0 15.899195 14-15 AGTACTT 17285 0.0 15.736585 12-13 >>END_MODULE