##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138805_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 8261586 Sequences flagged as poor quality 0 Sequence length 19-101 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.38644480611834 33.0 31.0 34.0 31.0 34.0 2 32.58138631008622 34.0 31.0 34.0 31.0 34.0 3 32.66074625380647 34.0 31.0 34.0 31.0 34.0 4 36.13698507768363 37.0 35.0 37.0 35.0 37.0 5 35.94778472317543 37.0 35.0 37.0 35.0 37.0 6 36.01484073397045 37.0 35.0 37.0 35.0 37.0 7 36.012517330207544 37.0 35.0 37.0 35.0 37.0 8 35.99723709224839 37.0 35.0 37.0 35.0 37.0 9 37.846699047858365 39.0 38.0 39.0 35.0 39.0 10-11 37.71491006690483 39.0 37.0 39.0 35.0 39.0 12-13 37.719954437319906 39.0 37.0 39.0 35.0 39.0 14-15 39.02261666222442 40.0 38.0 41.0 36.0 41.0 16-17 38.988449009669566 40.0 38.0 41.0 36.0 41.0 18-19 39.05483474964734 40.0 38.5 41.0 36.0 41.0 20-21 39.07331128841936 40.0 39.0 41.0 36.0 41.0 22-23 39.03257667346972 40.0 39.0 41.0 36.0 41.0 24-25 38.99979682456882 40.0 38.5 41.0 36.0 41.0 26-27 38.90311975870749 40.0 38.0 41.0 35.0 41.0 28-29 38.83849367682352 40.0 38.0 41.0 35.0 41.0 30-31 38.71010267264934 40.0 38.0 41.0 35.0 41.0 32-33 38.57793938713774 40.0 38.0 41.0 35.0 41.0 34-35 38.53828786329005 40.0 38.0 41.0 35.0 41.0 36-37 38.49269664856875 40.0 38.0 41.0 34.0 41.0 38-39 38.42725229470508 40.0 38.0 41.0 34.0 41.0 40-41 38.34213997448313 40.0 38.0 41.0 34.0 41.0 42-43 38.36399226937499 40.0 38.0 41.0 34.0 41.0 44-45 38.30854170704383 40.0 38.0 41.0 34.0 41.0 46-47 38.26063852338884 40.0 38.0 41.0 34.0 41.0 48-49 38.22056214186293 40.0 38.0 41.0 34.0 41.0 50-51 38.16100801342819 40.0 37.5 41.0 33.5 41.0 52-53 37.910924423009945 40.0 37.0 41.0 33.0 41.0 54-55 37.75888602374578 39.5 37.0 41.0 33.0 41.0 56-57 37.663418468690814 39.0 36.0 41.0 33.0 41.0 58-59 37.52904626034744 39.0 36.0 41.0 32.5 41.0 60-61 37.3419567702697 39.0 36.0 40.0 32.0 41.0 62-63 37.09228928918889 39.0 35.0 40.0 32.0 41.0 64-65 36.84827881949384 38.0 35.0 40.0 31.5 41.0 66-67 36.58409489067558 38.0 35.0 40.0 31.0 41.0 68-69 36.340536982548684 37.0 35.0 40.0 31.0 41.0 70-71 36.03171094182855 37.0 35.0 39.0 31.0 41.0 72-73 35.74186917925965 36.0 34.0 39.0 31.0 40.5 74-75 35.288945617192546 36.0 34.0 39.0 30.5 40.0 76-77 33.33686285934441 34.5 32.0 36.5 27.5 39.0 78-79 34.55925615564735 35.0 34.0 37.0 30.0 39.0 80-81 34.543273060847014 35.0 34.0 37.0 30.0 39.0 82-83 34.280474843007305 35.0 34.0 36.0 30.0 38.5 84-85 34.00048210740027 35.0 34.0 36.0 30.0 37.0 86-87 33.7710186773418 35.0 34.0 35.5 30.0 37.0 88-89 33.63236017571346 35.0 33.0 35.0 30.0 36.5 90-91 33.467643280271304 35.0 33.0 35.0 29.5 36.0 92-93 33.434060504826164 35.0 33.0 35.0 30.0 36.0 94-95 33.30371282619157 35.0 33.0 35.0 29.0 36.0 96-97 33.33017308442689 35.0 33.0 35.0 29.5 35.0 98-99 33.43642022420099 35.0 33.0 35.0 30.0 35.0 100-101 32.195972687178866 33.5 31.0 34.5 27.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 14.0 20 33.0 21 134.0 22 733.0 23 2357.0 24 6180.0 25 13410.0 26 25057.0 27 40405.0 28 61006.0 29 85500.0 30 115013.0 31 151044.0 32 201590.0 33 277237.0 34 408897.0 35 636722.0 36 1132620.0 37 2005288.0 38 2218857.0 39 865623.0 40 13866.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.4691319560191 20.408381635196925 13.96952110648004 24.15296530230394 2 14.603184132909085 21.266891701739883 41.67439021866055 22.455533946690483 3 18.351298160449637 26.16290829386373 30.32641721079219 25.159376334894446 4 12.638052181491366 18.044216884240853 38.94006572616519 30.377665208102595 5 13.229690907730829 37.87387977988623 35.73373555022268 13.162693762160254 6 29.934991688614705 38.10558031480499 18.907085212367303 13.052342784213003 7 26.396118130344465 32.499776677262695 23.526451216509763 17.57765397588308 8 24.0300349109723 37.396112562406294 21.362314693570944 17.211537833050457 9 25.463125361159467 16.877401022031364 21.39025121810752 36.26922239870166 10-11 24.102764535935624 26.851510524220807 29.196018125092333 19.849706814751237 12-13 24.85592369189279 24.354241644155135 29.265796829452732 21.52403783449933 14-15 21.94333681835857 25.78173251649587 26.751067824844952 25.52386284030061 16-17 21.743162985648983 28.855584904280953 27.415453762200766 21.985798347869302 18-19 21.746932126591673 28.261516614364364 28.848292567553006 21.143258691490956 20-21 22.484076614303792 27.451445467998564 28.681594685036853 21.38288323266079 22-23 22.233380873951226 27.37498253013941 28.513590719283716 21.878045876625652 24-25 21.98483806359087 27.511944530664508 28.57380436184916 21.929413043895465 26-27 21.971913112604216 27.643663953005138 28.485021768118994 21.899401166271655 28-29 21.884297534684837 27.792079929148596 28.476334848270536 21.847287687896028 30-31 22.206028157361153 27.559675135756624 28.38203205720811 21.852264649674105 32-33 22.000078151971255 27.734746853348437 28.332232064122596 21.932942930557715 34-35 22.09949938300932 27.78977702453999 28.343999699964534 21.76672389248615 36-37 22.070964022441792 27.7309860089627 28.317827333431104 21.8802226351644 38-39 21.96385721158015 27.82576980591679 28.3735596773613 21.83681330514176 40-41 22.2208321314696 27.702515728173505 28.19469724727729 21.8819548930796 42-43 22.06081935603146 27.79434644325713 28.044888317353628 22.099945883357783 44-45 22.164167815503507 27.87106445157328 27.914228823139357 22.05053890978386 46-47 22.22642953122253 27.823888970564802 27.723136307044772 22.226545191167897 48-49 22.169093435224173 27.92122492513861 27.76065173198662 22.149029907650597 50-51 22.172121165317137 28.011952280450693 27.64964336159792 22.16628319263425 52-53 22.34470419342572 27.894791547202914 27.530385775426204 22.230118483945166 54-55 22.27261095932027 27.81912800444855 27.58121576791205 22.327045268319132 56-57 22.228546451623 27.924403489809578 27.575464527744998 22.27158553082242 58-59 22.265346020880934 27.969125935533345 27.538127677814266 22.22740036577146 60-61 22.379854818778394 27.882882723744967 27.541580570479585 22.195681886997054 62-63 22.33824547817608 27.952247707087107 27.47924675947422 22.230260055262594 64-65 22.30674477048595 27.917583859752426 27.474937962238588 22.30073340752304 66-67 22.395679117659657 27.89398313022883 27.347541265876025 22.362796486235492 68-69 22.268876921676164 27.95339639897213 27.426948903958092 22.350777775393617 70-71 22.297198070128868 27.73589044658892 27.48333593016602 22.48357555311619 72-73 22.34724543952834 27.764124569467004 27.418011590445758 22.4706184005589 74-75 22.245776636177023 27.872539363343517 27.40381730397436 22.477866696505096 76-77 22.32601503425155 27.819142915364147 27.378877282291814 22.47596476809249 78-79 22.327509466449115 27.829071343846557 27.346426950150178 22.49699223955415 80-81 22.32423855405107 27.827450440126523 27.370669170853002 22.477641834969404 82-83 22.394044820099587 27.753241303944655 27.43196243849622 22.420751437459536 84-85 22.48243696829303 27.795023484209068 27.33553274235444 22.38700680514346 86-87 22.312371840354224 27.807898088343702 27.42532300497643 22.454407066325636 88-89 22.359568521928505 27.782804139223078 27.395301211682398 22.46232612716602 90-91 22.380434191196475 27.779849075240552 27.437259079132957 22.402457654430012 92-93 22.396205044534724 27.788878417871203 27.383639823310936 22.43127671428314 94-95 22.297740283958923 27.81777706105098 27.425929200979915 22.45855345401019 96-97 22.241788088307807 27.84236017971925 27.47749350193783 22.438358230035117 98-99 22.54638108747587 28.39946963213421 27.543733590577702 21.510415689812223 100-101 26.695269197827407 35.46818161961441 28.02263812799799 9.813911054560185 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1559.0 1 1426.0 2 1936.5 3 2757.5 4 3852.0 5 6371.5 6 8455.0 7 9663.0 8 10264.0 9 9901.0 10 9044.5 11 8291.5 12 8984.5 13 11634.5 14 17781.5 15 26067.5 16 32553.0 17 36323.0 18 37602.0 19 36862.5 20 35473.0 21 34616.5 22 35846.5 23 40658.0 24 49505.0 25 62526.0 26 79059.0 27 97007.0 28 115711.5 29 135617.5 30 153512.0 31 169520.0 32 187510.0 33 205721.5 34 222047.5 35 238341.5 36 256761.5 37 273716.0 38 287620.0 39 299338.5 40 310545.0 41 321657.0 42 329624.0 43 336918.0 44 344139.5 45 350715.5 46 355130.0 47 357415.0 48 358515.5 49 353848.5 50 345676.5 51 336065.5 52 321723.5 53 305464.5 54 288343.0 55 267856.5 56 245808.5 57 222253.5 58 196815.5 59 170420.5 60 142670.5 61 115874.5 62 92078.5 63 71645.0 64 53755.0 65 39806.0 66 29909.5 67 22600.0 68 17054.5 69 12086.5 70 8314.0 71 5805.5 72 3948.0 73 2567.5 74 1688.5 75 1178.5 76 833.0 77 578.0 78 415.5 79 297.0 80 215.5 81 159.5 82 116.0 83 75.5 84 50.5 85 33.0 86 23.5 87 20.0 88 15.5 89 10.0 90 6.0 91 3.5 92 3.0 93 2.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 7.141485908395797E-4 3 0.001997195211670011 4 4.357516825461842E-4 5 4.8416853616242695E-4 6 3.2681376190963815E-4 7 0.0 8 0.0 9 0.0 10-11 6.0521067020303365E-6 12-13 9.501807522187628E-4 14-15 5.870543500969427E-4 16-17 1.452505608487281E-4 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 3.0281435051742194E-5 28-29 2.0604751892122245E-4 30-31 4.248461950562348E-5 32-33 0.001150354567884523 34-35 0.0017713506389811483 36-37 0.0013076081183187671 38-39 6.865185143219822E-4 40-41 1.8710091375096917E-5 42-43 5.032348249066767E-5 44-45 6.226202643455044E-4 46-47 3.212775228012265E-5 48-49 0.0 50-51 0.0 52-53 8.622873392140887E-4 54-55 0.0034908031741786158 56-57 0.005885860632031707 58-59 0.004314933429823464 60-61 2.0781496488031E-4 62-63 4.2025832859200224E-5 64-65 9.20466979804813E-5 66-67 1.3608563424894374E-4 68-69 0.0 70-71 1.2476523952357292E-4 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86-87 0.0 88-89 2.9677198637321963E-4 90-91 1.0881973032294431E-4 92-93 4.0840205548754526E-4 94-95 2.858045801656298E-4 96-97 0.0 98-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 131.0 20-21 551.0 22-23 1242.0 24-25 2881.0 26-27 4426.0 28-29 8862.0 30-31 22430.0 32-33 27213.0 34-35 36295.0 36-37 56356.0 38-39 67585.0 40-41 67312.0 42-43 75233.0 44-45 87346.0 46-47 87276.0 48-49 82774.0 50-51 77181.0 52-53 74353.0 54-55 79715.0 56-57 81582.0 58-59 82170.0 60-61 80858.0 62-63 76958.0 64-65 79208.0 66-67 83195.0 68-69 84495.0 70-71 84167.0 72-73 80645.0 74-75 81144.0 76-77 79628.0 78-79 84761.0 80-81 85992.0 82-83 82809.0 84-85 81862.0 86-87 85386.0 88-89 90692.0 90-91 95919.0 92-93 99904.0 94-95 117403.0 96-97 171364.0 98-99 683301.0 100-101 4828981.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 86.22685842667003 #Duplication Level Percentage of deduplicated Percentage of total 1 90.4154530879857 77.96240473000968 2 6.760096627079433 11.658037896275756 3 1.637436852949167 4.235731071055798 4 0.553776493950975 1.910016293757136 5 0.2545861460137183 1.0976081784858216 6 0.13384382630006936 0.6924559596995937 7 0.06773781573632583 0.40885733333396196 8 0.0485976508634841 0.33523382086995057 9 0.029526697732046497 0.2291394946633427 >10 0.09676036194141026 1.304554472001806 >50 0.001786785506558393 0.10125005320603413 >100 3.7591245672228266E-4 0.05408114818637031 >500 2.174148447529994E-5 0.010629548454757673 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 1.2104213404060673E-5 0.0 2 0.0 0.0 0.0 2.4208426808121346E-5 0.0 3 0.0 0.0 0.0 3.631264021218202E-5 0.0 4 0.0 2.4208426808121346E-5 0.0 3.631264021218202E-5 0.0 5 0.0 2.4208426808121346E-5 0.0 3.631264021218202E-5 0.0 6 0.0 2.4208426808121346E-5 0.0 3.631264021218202E-5 2.4208426808121346E-5 7 0.0 2.4208426808121346E-5 0.0 6.052106702030337E-5 3.631264021218202E-5 8 0.0 2.4208426808121346E-5 0.0 7.262528042436404E-5 3.631264021218202E-5 9 0.0 6.052106702030337E-5 0.0 1.2104213404060674E-4 3.631264021218202E-5 10-11 6.0521067020303365E-6 6.052106702030337E-5 0.0 1.4525056084872806E-4 3.631264021218202E-5 12-13 1.2104213404060673E-5 6.052106702030337E-5 0.0 1.5735477425278874E-4 4.2364746914212354E-5 14-15 1.2104213404060673E-5 1.2104213404060674E-4 0.0 1.6340688095481908E-4 5.446896031827303E-5 16-17 1.2104213404060673E-5 1.331463474446674E-4 0.0 1.815632010609101E-4 6.052106702030337E-5 18-19 1.2104213404060673E-5 1.6340688095481908E-4 0.0 2.2392794797512246E-4 6.052106702030337E-5 20-21 1.2104213404060673E-5 1.9366741446497077E-4 0.0 2.5418848148527415E-4 6.052106702030337E-5 22-23 1.2104213404060673E-5 1.9366741446497077E-4 0.0 2.783969082933955E-4 9.078160053045505E-5 24-25 1.2104213404060673E-5 2.3603216137918313E-4 0.0 2.783969082933955E-4 1.331463474446674E-4 26-27 1.2104213404060673E-5 2.5418848148527415E-4 0.0 3.631264021218202E-4 1.452505608487281E-4 28-29 1.2104213404060673E-5 2.602405881873045E-4 0.0 7.141485908395797E-4 1.452505608487281E-4 30-31 1.2104213404060673E-5 3.3891797531369883E-4 0.0 0.0019306220379476772 1.513026675507584E-4 32-33 1.2104213404060673E-5 3.3891797531369883E-4 0.0 0.004393829465674024 1.815632010609101E-4 34-35 1.2104213404060673E-5 3.812827222279112E-4 0.0 0.0077890613255130435 1.9366741446497077E-4 36-37 1.2104213404060673E-5 4.2364746914212356E-4 0.0 0.01260048615362716 1.9366741446497077E-4 38-39 2.4208426808121346E-5 4.599601093543056E-4 0.0 0.019923535263083866 1.9366741446497077E-4 40-41 2.4208426808121346E-5 5.20481176374609E-4 0.0 0.02768233605508676 1.997195211670011E-4 42-43 2.4208426808121346E-5 5.507417098847607E-4 0.0 0.034484903988168863 2.1182373457106178E-4 44-45 2.4208426808121346E-5 5.810022433949124E-4 0.0 0.04180795309762556 2.1787584127309212E-4 46-47 2.4208426808121346E-5 5.810022433949124E-4 0.0 0.04979068183760358 2.4208426808121347E-4 48-49 2.4208426808121346E-5 5.810022433949124E-4 0.0 0.05757369105641459 2.4208426808121347E-4 50-51 2.4208426808121346E-5 6.052106702030336E-4 0.0 0.06524776235458907 2.4208426808121347E-4 52-53 2.4208426808121346E-5 6.052106702030336E-4 0.0 0.07234688351607065 2.5418848148527415E-4 54-55 2.4208426808121346E-5 6.112627769050639E-4 0.0 0.0797788705461639 2.7234480159136516E-4 56-57 2.4208426808121346E-5 6.173148836070943E-4 0.0 0.08707771122881248 2.783969082933955E-4 58-59 2.4208426808121346E-5 6.173148836070943E-4 0.0 0.09412841553667782 2.9655322839948646E-4 60-61 2.4208426808121346E-5 6.29419097011155E-4 0.0 0.10125779723166956 3.147095485055775E-4 62-63 2.4208426808121346E-5 6.415233104152156E-4 0.0 0.10854453370091408 3.2681376190963815E-4 64-65 2.4208426808121346E-5 6.899401640314583E-4 0.0 0.11569207171601192 3.2681376190963815E-4 66-67 2.4208426808121346E-5 6.899401640314583E-4 0.0 0.12244017068877575 3.328658686116685E-4 68-69 2.4208426808121346E-5 7.323049109456707E-4 0.0 0.12949087499664108 3.3891797531369883E-4 70-71 3.631264021218202E-5 7.504612310517617E-4 0.0 0.13605135866164197 3.510221887177595E-4 72-73 3.631264021218202E-5 7.504612310517617E-4 0.0 0.14137721255942864 3.994390423340022E-4 74-75 3.631264021218202E-5 7.746696578598831E-4 0.0 0.14548054090340523 3.994390423340022E-4 76-77 3.631264021218202E-5 8.049301913700348E-4 0.0 0.14925100337877012 4.0549114903603255E-4 78-79 3.631264021218202E-5 8.109822980720651E-4 0.0 0.15260387049169494 4.115432557380629E-4 80-81 3.631264021218202E-5 8.109822980720651E-4 0.0 0.1541290013806066 4.115432557380629E-4 82-83 3.631264021218202E-5 8.170344047740954E-4 0.0 0.1546676388770873 4.115432557380629E-4 84-85 3.631264021218202E-5 8.230865114761258E-4 0.0 0.15510339055963346 4.115432557380629E-4 86-87 3.631264021218202E-5 8.230865114761258E-4 0.0 0.15531521429420453 4.2364746914212356E-4 88-89 4.841685361624269E-5 8.351907248801865E-4 0.0 0.15540599589473497 4.2364746914212356E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 8675 0.0 43.53731 1 GTATCAA 14835 0.0 33.25159 1 TCAACGC 16690 0.0 28.579458 4 ATCAACG 17045 0.0 27.935768 3 CAACGCA 17130 0.0 27.845032 5 AACGCAG 17700 0.0 27.019384 6 TATCAAC 18400 0.0 26.423515 2 ACGCAGA 20645 0.0 23.104439 7 CGCAGAG 20980 0.0 22.75541 8 GTACATG 21880 0.0 20.847567 1 TACATGG 21765 0.0 20.15239 2 ACATGGG 21925 0.0 19.30058 3 GCAGAGT 25940 0.0 18.308031 9 CATGGGG 16400 0.0 17.481432 4 GAGTACT 14410 0.0 17.303715 12-13 GTGGTAT 4790 0.0 17.250917 1 CAGAGTA 24845 0.0 16.956518 10-11 AGAGTAC 22740 0.0 16.663443 10-11 TGGTATC 4750 0.0 15.638998 2 GTACTTT 16425 0.0 15.24471 14-15 >>END_MODULE