##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138803_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5266359 Sequences flagged as poor quality 0 Sequence length 19-101 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.44885508185067 33.0 31.0 34.0 31.0 34.0 2 32.6395927432976 34.0 31.0 34.0 31.0 34.0 3 32.71968014334002 34.0 31.0 34.0 31.0 34.0 4 36.17985234200707 37.0 35.0 37.0 35.0 37.0 5 35.99702394006941 37.0 35.0 37.0 35.0 37.0 6 36.06400778982215 37.0 35.0 37.0 35.0 37.0 7 36.06436078512688 37.0 35.0 37.0 35.0 37.0 8 36.05125286749346 37.0 35.0 37.0 35.0 37.0 9 37.90920121472919 39.0 38.0 39.0 35.0 39.0 10-11 37.78656354418679 39.0 37.5 39.0 35.0 39.0 12-13 37.79222580534294 39.0 38.0 39.0 35.0 39.0 14-15 39.11417898020245 40.0 38.5 41.0 36.0 41.0 16-17 39.085932994693295 40.0 38.0 41.0 36.0 41.0 18-19 39.151482646739424 40.0 38.5 41.0 36.0 41.0 20-21 39.16995120849535 40.0 39.0 41.0 36.0 41.0 22-23 39.13111177962283 40.0 39.0 41.0 36.0 41.0 24-25 39.09904887534727 40.0 39.0 41.0 36.0 41.0 26-27 39.007268207758926 40.0 39.0 41.0 35.5 41.0 28-29 38.94087754759285 40.0 38.0 41.0 35.0 41.0 30-31 38.809670824890375 40.0 38.0 41.0 35.0 41.0 32-33 38.67576304270706 40.0 38.0 41.0 35.0 41.0 34-35 38.63888303882098 40.0 38.0 41.0 35.0 41.0 36-37 38.590001080715496 40.0 38.0 41.0 35.0 41.0 38-39 38.51942534126946 40.0 38.0 41.0 34.5 41.0 40-41 38.4309114164529 40.0 38.0 41.0 34.0 41.0 42-43 38.45122992274105 40.0 38.0 41.0 34.0 41.0 44-45 38.392154756067676 40.0 38.0 41.0 34.0 41.0 46-47 38.34001424074174 40.0 38.0 41.0 34.0 41.0 48-49 38.292040887777645 40.0 38.0 41.0 34.0 41.0 50-51 38.22675492398097 40.0 37.5 41.0 34.0 41.0 52-53 37.97219669823768 40.0 37.0 41.0 33.0 41.0 54-55 37.81797069852986 40.0 37.0 41.0 33.0 41.0 56-57 37.714762789641725 39.0 36.5 41.0 33.0 41.0 58-59 37.57104407689856 39.0 36.0 41.0 33.0 41.0 60-61 37.381917960346726 39.0 36.0 40.5 32.5 41.0 62-63 37.12148791472841 39.0 35.0 40.0 32.0 41.0 64-65 36.872035141690176 38.0 35.0 40.0 32.0 41.0 66-67 36.6015204442206 38.0 35.0 40.0 31.0 41.0 68-69 36.35355206824163 37.0 35.0 40.0 31.0 41.0 70-71 36.04316977640051 37.0 35.0 39.0 31.0 41.0 72-73 35.75331839470511 36.0 34.0 39.0 31.0 40.5 74-75 35.30142295712868 36.0 34.0 39.0 30.5 40.0 76-77 33.37905534560748 34.5 32.0 36.5 27.5 39.0 78-79 34.5804628419645 35.0 34.0 37.0 30.0 39.0 80-81 34.565734530633165 35.0 34.0 37.0 30.0 39.0 82-83 34.303326470486695 35.0 34.0 36.0 30.0 38.5 84-85 34.034804074028685 35.0 34.0 36.0 30.0 37.0 86-87 33.81259890793879 35.0 34.0 35.5 30.0 37.0 88-89 33.68248693595144 35.0 34.0 35.0 30.0 36.5 90-91 33.52225828359997 35.0 33.0 35.0 30.0 36.0 92-93 33.49025532628017 35.0 33.0 35.0 30.0 36.0 94-95 33.36479182932306 35.0 33.0 35.0 30.0 36.0 96-97 33.391772894239296 35.0 33.0 35.0 30.0 35.0 98-99 33.49388591432192 35.0 33.0 35.0 30.0 35.0 100-101 32.25382626254307 34.0 31.0 34.5 27.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 10.0 20 20.0 21 82.0 22 374.0 23 1388.0 24 3666.0 25 8150.0 26 15403.0 27 25031.0 28 37551.0 29 52423.0 30 70425.0 31 93169.0 32 122466.0 33 168695.0 34 251610.0 35 393887.0 36 710982.0 37 1287475.0 38 1443785.0 39 571052.0 40 8714.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.94419711986973 20.058583169130703 13.918344723555688 24.07887498744389 2 14.744123737376135 20.940904598376665 41.57535202508775 22.73961963915945 3 18.4043209519037 26.04782874787301 30.05028058881401 25.497569711409284 4 12.659802451263172 17.81569232253255 38.65002413438084 30.87448109182344 5 13.320892064779667 37.800550059016274 35.54900705309034 13.32955082311372 6 30.30877117960962 37.808058633654916 18.68681910561194 13.196351081123522 7 26.794660219707772 32.349010008622656 23.233983858677316 17.62234591299226 8 24.40676755990239 37.1310615170747 21.029956370236057 17.43221455278685 9 25.625427358826087 16.81784321957542 21.17064180394842 36.38608761765007 10-11 24.33204800508283 26.749781015688452 28.89629248594712 20.0218784932816 12-13 25.088456207400768 24.212007029974423 29.024706404763943 21.674830357860866 14-15 22.212907272822388 25.582106537091185 26.531677542529415 25.673308647557015 16-17 21.902652556712397 28.663574204007976 27.239191903770976 22.194581335508655 18-19 21.891861151129273 28.02342187458166 28.737530046850207 21.347186927438862 20-21 22.698938980079873 27.23120523283696 28.554434771974858 21.515421015108313 22-23 22.41625892435791 27.145819664114658 28.40219454459307 22.035726866934368 24-25 22.109581955971464 27.288038384388834 28.502551263408886 22.099828396230812 26-27 22.167468917796064 27.378342240654817 28.39874943448468 22.055439407064434 28-29 22.04674435336547 27.54918987203142 28.41358242055772 21.99048335404539 30-31 22.410071264370877 27.337570187132048 28.29161440733394 21.96074414116313 32-33 22.158813383635735 27.550949985524202 28.24900509320877 22.041231537631297 34-35 22.258455789222158 27.552170350758487 28.261262853139606 21.92811100687975 36-37 22.269773838419063 27.510638731912422 28.21392472981701 22.005662699851506 38-39 22.128004210404743 27.619774562745164 28.27764061536864 21.974580611481453 40-41 22.363024144744266 27.48352524748744 28.114570855788845 22.03887975197945 42-43 22.198452181568072 27.568148657342118 27.9641388335731 22.26926032751671 44-45 22.297802454919697 27.660503949540466 27.83869402126855 22.20299957427128 46-47 22.35732969859775 27.633370552415133 27.602850101905563 22.406449647081555 48-49 22.312488587003248 27.757798724627115 27.60405887020391 22.325653818165726 50-51 22.277496410806556 27.837344449057653 27.5098488124361 22.375310327699694 52-53 22.51538223144987 27.747483599221678 27.33276733594719 22.40436683338126 54-55 22.436546717067497 27.663999301203607 27.41224243637536 22.487211545353535 56-57 22.419113245256224 27.732521714607532 27.41149930636531 22.436865733770933 58-59 22.40666493411708 27.80843390492185 27.423163789813227 22.361737371147846 60-61 22.526796946507627 27.714841411457268 27.40730658181223 22.351055060222876 62-63 22.488778525150217 27.788295868894497 27.2826653147762 22.44026029117909 64-65 22.42625542875551 27.759229915488103 27.366042120334672 22.44847253542171 66-67 22.538245665283778 27.778131623845546 27.180202168005597 22.50342054286508 68-69 22.41212436338516 27.771777535520105 27.28512285734871 22.530975243746028 70-71 22.43281485157116 27.551152677786455 27.373203624202525 22.64282884643986 72-73 22.487841770851855 27.616023307364955 27.30757933297711 22.58855558880608 74-75 22.367057650600188 27.76423632753233 27.297644617319083 22.571061404548402 76-77 22.46396299103998 27.70362857023199 27.238369644446138 22.594038794281886 78-79 22.451344915007045 27.695598874337385 27.168719555799548 22.684336654856025 80-81 22.466542399307894 27.696495250810006 27.213394848487404 22.623567501394696 82-83 22.48834003538802 27.686879712210622 27.31796777791687 22.506812474484487 84-85 22.604900165887944 27.65902370152421 27.215799567051235 22.520276565536605 86-87 22.433529537245693 27.685370683849452 27.290883032642103 22.59021674626275 88-89 22.422754145367684 27.723924099804552 27.249668241353557 22.603653513474203 90-91 22.50018573938027 27.706364163842444 27.22863476542466 22.564815331352627 92-93 22.515658772815886 27.672042860562975 27.26973556248223 22.542562804138914 94-95 22.393734349079665 27.703479551499342 27.329211343603887 22.573574755817106 96-97 22.36000716255339 27.73861339576277 27.366073931962788 22.535305509721056 98-99 22.676472307744014 28.279459076116105 27.381878016190665 21.66219059994922 100-101 26.876861843090317 35.350726916819994 27.89573035689517 9.87668088319452 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1161.0 1 1030.5 2 1343.0 3 1908.5 4 2706.0 5 4457.0 6 5894.0 7 6821.5 8 7278.5 9 7017.0 10 6291.0 11 5609.5 12 6084.5 13 8001.0 14 12368.0 15 18203.0 16 22734.5 17 25175.0 18 25573.5 19 24477.5 20 23018.5 21 21941.5 22 22151.5 23 24682.0 24 29773.0 25 37468.0 26 47357.5 27 58114.5 28 68995.0 29 80485.0 30 91479.5 31 101698.5 32 112400.5 33 123565.5 34 134813.5 35 144862.5 36 155400.5 37 166213.0 38 175069.0 39 181390.0 40 187860.0 41 195113.0 42 200869.0 43 206590.0 44 212454.5 45 217893.0 46 221157.5 47 223568.5 48 225810.0 49 223853.0 50 220207.5 51 215868.0 52 207418.5 53 198696.0 54 189590.0 55 177352.0 56 164397.0 57 150316.0 58 134556.0 59 117153.5 60 97787.5 61 79310.0 62 62990.0 63 48514.5 64 36553.0 65 27436.5 66 20519.0 67 15439.5 68 11640.5 69 8426.0 70 5987.5 71 4236.0 72 2946.5 73 1958.0 74 1314.0 75 875.5 76 595.0 77 409.5 78 280.5 79 211.0 80 157.5 81 111.5 82 80.5 83 53.0 84 37.0 85 30.0 86 29.5 87 25.0 88 16.0 89 11.5 90 7.5 91 4.5 92 5.0 93 3.0 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 8.354918455046456E-4 3 0.002126706515830007 4 2.468498634445544E-4 5 2.8482676551294737E-4 6 6.076304330942877E-4 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 9.96893679295316E-4 14-15 6.361131096455825E-4 16-17 1.1393070620517896E-4 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 2.8501393860666758E-5 28-29 1.5210791143668964E-4 30-31 2.856133961822438E-5 32-33 0.0010977239695760552 34-35 0.0018962405881103991 36-37 0.001173941802123834 38-39 7.557278356652382E-4 40-41 9.763972562065424E-6 42-43 2.952799209358484E-5 44-45 6.855327941005234E-4 46-47 1.0042924463449228E-5 48-49 0.0 50-51 0.0 52-53 0.001117904797985287 54-55 0.0038135609600853907 56-57 0.0062161508686200155 58-59 0.0045426708750709 60-61 2.0476415049604653E-4 62-63 2.1776581420786922E-5 64-65 1.0998555559698344E-4 66-67 2.445422341667518E-4 68-69 0.0 70-71 9.096428969397339E-5 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86-87 0.0 88-89 2.1538609287473663E-4 90-91 1.542469982891437E-4 92-93 6.526893673769145E-4 94-95 3.5837874235342544E-4 96-97 0.0 98-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 92.0 20-21 334.0 22-23 758.0 24-25 1690.0 26-27 2882.0 28-29 5651.0 30-31 13155.0 32-33 16123.0 34-35 21847.0 36-37 33247.0 38-39 40011.0 40-41 40014.0 42-43 44994.0 44-45 53368.0 46-47 53544.0 48-49 50684.0 50-51 46487.0 52-53 44337.0 54-55 47398.0 56-57 48690.0 58-59 49288.0 60-61 48226.0 62-63 45983.0 64-65 46943.0 66-67 49520.0 68-69 50936.0 70-71 50586.0 72-73 48585.0 74-75 49159.0 76-77 47704.0 78-79 51359.0 80-81 52210.0 82-83 49813.0 84-85 49385.0 86-87 51378.0 88-89 55554.0 90-91 59133.0 92-93 61303.0 94-95 71895.0 96-97 107343.0 98-99 440297.0 100-101 3164453.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 87.61520992391961 #Duplication Level Percentage of deduplicated Percentage of total 1 91.0328590766817 79.75863057978057 2 6.539148125301077 11.458576714437184 3 1.4762840642397401 3.880348145871061 4 0.46998853365578946 1.647125761523486 5 0.19933012375105116 0.873217531830461 6 0.10249262780339577 0.5387947860389207 7 0.0574374489372014 0.352267590228912 8 0.031936723650852775 0.22385141975613393 9 0.020913314272421074 0.1649091978164769 >10 0.06786715625262424 0.8934706333113486 >50 0.0011102263949125035 0.06770629541105781 >100 6.012474235964172E-4 0.12408155139589784 >500 3.133163569258632E-5 0.01701979259848748 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 1.898845103419649E-5 0.0 0.0 0.0 3 0.0 3.797690206839298E-5 0.0 0.0 0.0 4 0.0 7.595380413678596E-5 0.0 0.0 0.0 5 0.0 7.595380413678596E-5 0.0 0.0 0.0 6 5.696535310258947E-5 7.595380413678596E-5 0.0 0.0 0.0 7 5.696535310258947E-5 7.595380413678596E-5 0.0 3.797690206839298E-5 0.0 8 5.696535310258947E-5 9.494225517098246E-5 0.0 3.797690206839298E-5 0.0 9 5.696535310258947E-5 2.278614124103579E-4 0.0 5.696535310258947E-5 0.0 10-11 5.696535310258947E-5 2.278614124103579E-4 0.0 5.696535310258947E-5 0.0 12-13 5.696535310258947E-5 2.278614124103579E-4 0.0 8.54480296538842E-5 0.0 14-15 7.595380413678596E-5 3.6078056964973336E-4 0.0 1.1393070620517895E-4 9.494225517098245E-6 16-17 9.494225517098246E-5 3.6078056964973336E-4 0.0 1.1393070620517895E-4 1.898845103419649E-5 18-19 9.494225517098246E-5 3.7976902068392985E-4 0.0 1.4241338275647369E-4 3.797690206839298E-5 20-21 9.494225517098246E-5 4.367343737865193E-4 0.0 1.5190760827357193E-4 3.797690206839298E-5 22-23 1.1393070620517896E-4 5.221824034404035E-4 0.0 1.5190760827357193E-4 3.797690206839298E-5 24-25 1.3291915723937544E-4 6.17124658611386E-4 0.0 1.8039028482486665E-4 4.7471127585491224E-5 26-27 1.3291915723937544E-4 6.645957861968772E-4 0.0 2.7533253999584913E-4 5.696535310258947E-5 28-29 1.3291915723937544E-4 6.740900117139754E-4 0.0 6.55101560679779E-4 5.696535310258947E-5 30-31 1.3291915723937544E-4 7.500438158507614E-4 0.0 0.0017659259461802737 5.696535310258947E-5 32-33 1.3291915723937544E-4 7.595380413678597E-4 0.0 0.003968586266147067 5.696535310258947E-5 34-35 1.3291915723937544E-4 9.873994537782176E-4 0.0 0.006579498283349084 5.696535310258947E-5 36-37 1.3291915723937544E-4 0.001234249317222772 0.0 0.010908865119145884 5.696535310258947E-5 38-39 1.3291915723937544E-4 0.0012722262192911649 0.0 0.017773190168007914 5.696535310258947E-5 40-41 1.3291915723937544E-4 0.0013481800234279508 0.0 0.02504576691410517 5.696535310258947E-5 42-43 1.3291915723937544E-4 0.0013861569254963438 0.0 0.03113156547056515 5.696535310258947E-5 44-45 1.4241338275647369E-4 0.0015665472103212105 0.0 0.038299705735974326 5.696535310258947E-5 46-47 1.5190760827357193E-4 0.0017089605930776842 0.0 0.046474233906195914 5.696535310258947E-5 48-49 1.5190760827357193E-4 0.0017089605930776842 0.0 0.05435444108538746 5.696535310258947E-5 50-51 1.9937873585906316E-4 0.0018893508779025507 0.0 0.06137067374252306 5.696535310258947E-5 52-53 2.088729613761614E-4 0.0019178335544538455 0.0 0.06912745598999233 6.645957861968772E-5 54-55 2.088729613761614E-4 0.0019273277799709437 0.0 0.07691272091401288 8.54480296538842E-5 56-57 2.278614124103579E-4 0.001936822005488042 0.0 0.08423276878769564 9.494225517098246E-5 58-59 2.278614124103579E-4 0.0019463162310051404 0.0 0.09111608228759185 9.494225517098246E-5 60-61 2.7533253999584913E-4 0.0019842931330735334 0.0 0.09749620183508188 9.494225517098246E-5 62-63 3.417921186155368E-4 0.0020697411627274174 0.0 0.10418013659911905 1.1393070620517895E-4 64-65 3.417921186155368E-4 0.002316591026171972 0.0 0.11118687503073756 1.1393070620517895E-4 66-67 3.417921186155368E-4 0.0023355794772061686 0.0 0.11768092528443276 1.1393070620517895E-4 68-69 3.417921186155368E-4 0.0024210275068600527 0.0 0.12391863144916632 1.1393070620517895E-4 70-71 3.5128634413263506E-4 0.0024684986344455442 0.0 0.13014684338838275 1.1393070620517895E-4 72-73 3.892632462010281E-4 0.0024969813109968386 0.0 0.13515030023589353 1.5190760827357193E-4 74-75 3.9875747171812633E-4 0.002553946664099428 0.0 0.13929927678686543 1.5190760827357193E-4 76-77 3.9875747171812633E-4 0.0027058542723729997 0.0 0.14313494389577314 1.5190760827357193E-4 78-79 3.9875747171812633E-4 0.0027533253999584913 0.0 0.14684718607295857 1.5190760827357193E-4 80-81 3.9875747171812633E-4 0.0027628196254755894 0.0 0.14837575638121137 1.5190760827357193E-4 82-83 3.9875747171812633E-4 0.0027723138509926875 0.0 0.14906883484395955 1.5190760827357193E-4 84-85 3.9875747171812633E-4 0.0027723138509926875 0.0 0.14961949992395124 1.5190760827357193E-4 86-87 3.9875747171812633E-4 0.0028102907530610805 0.0 0.1498283728853274 1.5190760827357193E-4 88-89 3.9875747171812633E-4 0.002971692586851751 0.0 0.1498948324639471 1.5190760827357193E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 6245 0.0 43.538105 1 GTATCAA 10395 0.0 34.416275 1 TCAACGC 12495 0.0 27.75543 4 ATCAACG 12530 0.0 27.678429 3 CAACGCA 12710 0.0 27.285929 5 AACGCAG 13065 0.0 26.769764 6 TATCAAC 13280 0.0 26.654305 2 ACGCAGA 15060 0.0 23.083838 7 CGCAGAG 15275 0.0 22.786478 8 GTACATG 14640 0.0 20.153309 1 TACATGG 14475 0.0 19.685186 2 GCAGAGT 18305 0.0 19.037659 9 ACATGGG 14680 0.0 18.922703 3 AGAGTAC 15775 0.0 18.075605 10-11 GAGTACT 9990 0.0 18.073517 12-13 CATGGGG 10910 0.0 17.745577 4 CAGAGTA 17610 0.0 17.279528 10-11 GTACTTT 11585 0.0 15.5129 14-15 AGTACTT 11160 0.0 15.349036 12-13 GTGGTAT 3420 0.0 14.521962 1 >>END_MODULE