##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138801_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 10799191 Sequences flagged as poor quality 0 Sequence length 19-101 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.41232820125137 33.0 31.0 34.0 31.0 34.0 2 32.60397727940917 34.0 31.0 34.0 31.0 34.0 3 32.681866076820015 34.0 31.0 34.0 31.0 34.0 4 36.1546271382736 37.0 35.0 37.0 35.0 37.0 5 35.96808455374111 37.0 35.0 37.0 35.0 37.0 6 36.03405468057746 37.0 35.0 37.0 35.0 37.0 7 36.032272047045005 37.0 35.0 37.0 35.0 37.0 8 36.016222141084455 37.0 35.0 37.0 35.0 37.0 9 37.87422715275616 39.0 38.0 39.0 35.0 39.0 10-11 37.745580432830565 39.0 37.5 39.0 35.0 39.0 12-13 37.75095666888381 39.0 37.5 39.0 35.0 39.0 14-15 39.056663179677074 40.0 38.5 41.0 36.0 41.0 16-17 39.02423528762479 40.0 38.0 41.0 36.0 41.0 18-19 39.09619086281556 40.0 38.5 41.0 36.0 41.0 20-21 39.115394675778724 40.0 39.0 41.0 36.0 41.0 22-23 39.07407968194755 40.0 39.0 41.0 36.0 41.0 24-25 39.04050808187721 40.0 39.0 41.0 36.0 41.0 26-27 38.94596562752902 40.0 38.0 41.0 35.5 41.0 28-29 38.88302546659505 40.0 38.0 41.0 35.0 41.0 30-31 38.755240003191815 40.0 38.0 41.0 35.0 41.0 32-33 38.615093777790605 40.0 38.0 41.0 35.0 41.0 34-35 38.56555076245856 40.0 38.0 41.0 35.0 41.0 36-37 38.51770830930183 40.0 38.0 41.0 34.5 41.0 38-39 38.436404720192016 40.0 38.0 41.0 34.0 41.0 40-41 38.36028630506863 40.0 38.0 41.0 34.0 41.0 42-43 38.38032290610758 40.0 38.0 41.0 34.0 41.0 44-45 38.31610686984176 40.0 38.0 41.0 34.0 41.0 46-47 38.26252435356328 40.0 38.0 41.0 34.0 41.0 48-49 38.21720846992835 40.0 38.0 41.0 34.0 41.0 50-51 38.13818057866817 40.0 37.5 41.0 33.0 41.0 52-53 37.88481649545013 40.0 37.0 41.0 33.0 41.0 54-55 37.72783715995929 39.5 37.0 41.0 33.0 41.0 56-57 37.6169376125394 39.0 36.0 41.0 33.0 41.0 58-59 37.476562377879006 39.0 36.0 41.0 32.5 41.0 60-61 37.27328682234435 39.0 35.5 40.0 32.0 41.0 62-63 37.01815746074297 39.0 35.0 40.0 32.0 41.0 64-65 36.78750809818053 38.0 35.0 40.0 31.0 41.0 66-67 36.526271245006114 38.0 35.0 40.0 31.0 41.0 68-69 36.29166119765161 37.0 35.0 40.0 31.0 41.0 70-71 35.98619438573012 37.0 35.0 39.0 31.0 41.0 72-73 35.69936147208931 36.0 34.0 39.0 31.0 40.5 74-75 35.255847566031036 36.0 34.0 39.0 30.5 40.0 76-77 33.348227944901794 34.5 32.0 36.5 27.5 39.0 78-79 34.53792280398929 35.0 34.0 37.0 30.0 39.0 80-81 34.52160093159566 35.0 34.0 37.0 30.0 39.0 82-83 34.263406826642566 35.0 34.0 36.0 30.0 38.5 84-85 33.99163033807645 35.0 34.0 36.0 30.0 37.0 86-87 33.76880659779258 35.0 34.0 35.5 30.0 37.0 88-89 33.63980859609629 35.0 33.5 35.0 30.0 36.5 90-91 33.48248950062464 35.0 33.0 35.0 29.5 36.0 92-93 33.45756968100963 35.0 33.0 35.0 30.0 36.0 94-95 33.33417185859774 35.0 33.0 35.0 29.5 36.0 96-97 33.360937598096 35.0 33.0 35.0 30.0 35.0 98-99 33.470712335641316 35.0 33.0 35.0 30.0 35.0 100-101 32.20376996508686 33.5 31.0 34.5 27.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 9.0 20 32.0 21 183.0 22 886.0 23 3163.0 24 8348.0 25 18198.0 26 33712.0 27 55772.0 28 82519.0 29 113859.0 30 151680.0 31 199816.0 32 263348.0 33 360226.0 34 532189.0 35 829339.0 36 1490868.0 37 2643800.0 38 2884627.0 39 1109570.0 40 17046.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.479162652091254 20.38848095195279 14.040977699162834 24.09137869679312 2 14.615419589870656 20.941143047264855 41.954014420301135 22.48942294256335 3 18.2192342774066 26.28076803763329 30.43712583167808 25.062871853282033 4 12.506993611159109 18.124949185777908 38.528940539905854 30.839116663157128 5 13.1720325310457 37.92545550529342 35.672021187571886 13.230490776088994 6 29.936258783689617 38.028999544870956 18.706692711962578 13.328048959476845 7 26.513856454617756 32.50200871528247 23.05592150374968 17.928213326350097 8 24.308043074708095 37.337343139870384 21.15528839151007 17.19932539391145 9 25.430877183300122 16.823278706710532 20.98524787643815 36.7605962335512 10-11 24.178973221234813 26.77019047074915 28.9388019898898 20.112034318126238 12-13 25.078987019686714 24.12282263371492 29.014616933500243 21.78357341309812 14-15 22.226189106481055 25.608545690381007 26.30835222567749 25.85691297746045 16-17 21.952695572844213 28.927197663489157 26.926832728356814 22.193274035309813 18-19 21.952459216620948 28.00893603974594 28.487481145578403 21.551123598054705 20-21 22.665592170282828 27.106724021499495 28.376270360082074 21.851413448135602 22-23 22.3620918562774 27.261122335503384 28.270984242138663 22.105801566080554 24-25 22.12883990342718 27.43266598638851 28.470845115928885 21.967648994255427 26-27 22.08164716702052 27.477527627877024 28.428443190413148 22.012382014689308 28-29 21.79917999555965 27.34715133086955 28.461295357414112 22.392373316156686 30-31 22.15475253913058 27.208939273432193 28.44333644499761 22.192971742439617 32-33 22.011311317450744 27.49295764947666 28.41171832980491 22.084012703267685 34-35 22.03401325362884 27.688925075959865 28.532147723407142 21.744913947004154 36-37 22.1322771882152 27.45426020549396 28.208688417454464 22.20477418883638 38-39 22.088943793863063 27.425912013437088 28.419093370397334 22.06605082230252 40-41 22.252975738795723 27.287766416409394 28.388855678004365 22.070402166790526 42-43 22.298309148400854 27.32475524944039 28.297995695405042 22.078939906753718 44-45 22.156865196697602 27.576998573046946 28.089444597663103 22.176691632592345 46-47 22.47022294366468 27.35937723703403 27.696597621190435 22.473802198110857 48-49 22.335935116667518 27.460324355589993 27.78942586316253 22.41431466457996 50-51 22.170051944584156 27.66981811563954 27.791951162692985 22.368178777083322 52-53 22.353124661075046 27.639847270696606 27.8141895142426 22.192838553985748 54-55 22.27007615751576 27.563532778121314 27.639289046747617 22.527102017615306 56-57 22.49993689438409 27.69990096250627 27.45358977956774 22.3465723635419 58-59 22.207749671502693 27.917601958053005 27.730871468315204 22.143776902129094 60-61 22.47976353447666 28.03039284091528 27.352111473741488 22.137732150866572 62-63 22.287234825703194 28.180982043001407 27.306623301242517 22.225159830052878 64-65 22.298087560401783 28.032385098157487 27.35170019096372 22.317827150477008 66-67 22.400522492673048 27.931587479995727 27.222707962982646 22.44518206434858 68-69 22.340542798828718 27.8302603894537 27.361962331010968 22.467234480706612 70-71 22.35554092093114 27.611926795916762 27.41277134604971 22.61976093710239 72-73 22.388872981890064 27.676799577242516 27.342250864643464 22.592076576223956 74-75 22.312948228514134 27.760675827539483 27.346259790472104 22.58011615347428 76-77 22.44591052431056 27.668516422644885 27.26111405075739 22.624459002287168 78-79 22.38721635212566 27.706711813117575 27.233296506358162 22.672775328398608 80-81 22.41844047291299 27.772899791896457 27.192742806106075 22.61591692908448 82-83 22.473842157585597 27.651296588224017 27.32012665106995 22.554734603120437 84-85 22.5851345993994 27.67484043066095 27.21452804779943 22.52549692214022 86-87 22.37409156441499 27.75998136433365 27.294363045012 22.571564026239358 88-89 22.436920423483436 27.688822070217128 27.286471939255623 22.58778556704381 90-91 22.477166029872503 27.65134050795653 27.337370882410728 22.53412257976024 92-93 22.431715714680845 27.636899331485893 27.343433473200633 22.58795148063263 94-95 22.300399962712607 27.697698277185857 27.421781896352655 22.580119863748884 96-97 22.273799643258606 27.7232425367028 27.460723670318416 22.542234149720176 98-99 22.545322561751277 28.331112300145616 27.494483101790706 21.6290820363124 100-101 23.38960414022842 30.917430455565064 24.488577156465823 21.204388247740695 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2489.0 1 2214.5 2 2874.0 3 4098.5 4 5700.0 5 9044.0 6 11655.5 7 13556.5 8 14768.0 9 14414.0 10 13015.0 11 11560.0 12 12404.5 13 16265.0 14 25171.0 15 36947.0 16 46128.0 17 51218.5 18 52096.0 19 49847.5 20 46532.0 21 43725.5 22 43940.5 23 49342.0 24 59872.5 25 75744.5 26 96019.5 27 117652.5 28 140586.5 29 164730.5 30 185595.0 31 204887.0 32 226636.5 33 249597.0 34 271934.0 35 292982.0 36 316140.5 37 337981.5 38 353908.5 39 366038.5 40 380507.5 41 396323.0 42 407422.0 43 417990.5 44 431239.0 45 443262.0 46 459375.5 47 475840.5 48 478339.0 49 472916.5 50 467765.0 51 455290.0 52 433214.0 53 410037.5 54 386529.0 55 359407.0 56 330397.0 57 298341.5 58 264721.5 59 230815.0 60 193252.0 61 156621.0 62 124346.5 63 96523.5 64 72213.5 65 52694.5 66 39083.5 67 29659.0 68 22257.0 69 15768.0 70 10942.5 71 7556.0 72 5112.5 73 3478.5 74 2378.5 75 1621.0 76 1140.0 77 776.0 78 506.0 79 335.5 80 241.5 81 180.0 82 140.5 83 104.5 84 73.0 85 52.5 86 37.5 87 27.5 88 19.5 89 13.5 90 10.5 91 10.5 92 10.0 93 6.0 94 2.5 95 2.0 96 2.0 97 2.0 98 1.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0010185948188155946 3 0.0022316486484959845 4 4.537376920178558E-4 5 2.7779858694970764E-4 6 5.185573623061209E-4 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 9.86184983671462E-4 14-15 5.880070090435478E-4 16-17 1.0648945833072127E-4 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 4.633118410692125E-5 28-29 1.8080323925229053E-4 30-31 3.713755774600092E-5 32-33 0.0010982102430441643 34-35 0.0020630187827125 36-37 0.0014203866264270665 38-39 8.632552298053821E-4 40-41 6.175083178370413E-5 42-43 5.742647007097481E-5 44-45 7.530802793715429E-4 46-47 2.438183633165715E-5 48-49 0.0 50-51 0.0 52-53 0.001048430306698973 54-55 0.0038453479966571785 56-57 0.006642255186656057 58-59 0.00464559168191324 60-61 2.3480360217945748E-4 62-63 6.332563768521364E-5 64-65 1.5479914170815195E-4 66-67 2.48558401795413E-4 68-69 5.470515779921588E-6 70-71 8.299750697621713E-5 72-73 1.1191164620296934E-5 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86-87 1.2148412047653116E-5 88-89 3.1387827566599585E-4 90-91 1.0613398229060856E-4 92-93 4.564383771105282E-4 94-95 2.320786602253664E-4 96-97 0.0 98-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 193.0 20-21 751.0 22-23 1681.0 24-25 3619.0 26-27 5467.0 28-29 10899.0 30-31 25027.0 32-33 30076.0 34-35 41029.0 36-37 61962.0 38-39 73798.0 40-41 76355.0 42-43 86097.0 44-45 102475.0 46-47 103026.0 48-49 98393.0 50-51 90516.0 52-53 82936.0 54-55 93968.0 56-57 99303.0 58-59 101378.0 60-61 109200.0 62-63 106657.0 64-65 110318.0 66-67 118442.0 68-69 103343.0 70-71 102034.0 72-73 97243.0 74-75 98069.0 76-77 95785.0 78-79 103176.0 80-81 106423.0 82-83 101764.0 84-85 100680.0 86-87 105133.0 88-89 113517.0 90-91 120693.0 92-93 126576.0 94-95 149560.0 96-97 221970.0 98-99 909170.0 100-101 6510489.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 84.22119937513777 #Duplication Level Percentage of deduplicated Percentage of total 1 89.1763482861998 75.1053900855876 2 7.3865666798584915 12.442110100842232 3 1.9126661060811012 4.832611003749745 4 0.7145207220575356 2.4071116876030048 5 0.33448440517426786 1.408533888802819 6 0.1705766763354646 0.8619703359838505 7 0.08963601126781788 0.528447666332529 8 0.05507490275293016 0.3710779492256684 9 0.041526852967503386 0.31476972268783215 >10 0.11543680550939997 1.4600752289716479 >50 0.0024614742344371047 0.14309056290620992 >100 6.462813843655672E-4 0.08610750962699147 >500 3.653118501864946E-5 0.021567601037404408 >1k 1.826499183677001E-5 0.017136656642438363 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 9.259952898323587E-6 0.0 1.8519905796647174E-5 0.0 3 0.0 1.8519905796647174E-5 0.0 1.8519905796647174E-5 0.0 4 0.0 7.40796231865887E-5 0.0 2.7779858694970763E-5 9.259952898323587E-6 5 9.259952898323587E-6 8.333957608491229E-5 0.0 3.703981159329435E-5 9.259952898323587E-6 6 9.259952898323587E-6 8.333957608491229E-5 0.0 3.703981159329435E-5 1.8519905796647174E-5 7 9.259952898323587E-6 8.333957608491229E-5 0.0 3.703981159329435E-5 1.8519905796647174E-5 8 9.259952898323587E-6 1.0185948188155946E-4 0.0 3.703981159329435E-5 3.703981159329435E-5 9 9.259952898323587E-6 2.5001872825473686E-4 0.0 5.555971738994153E-5 4.629976449161794E-5 10-11 9.259952898323587E-6 2.5001872825473686E-4 0.0 8.796955253407407E-5 4.629976449161794E-5 12-13 9.259952898323587E-6 2.5001872825473686E-4 0.0 1.0648945833072125E-4 4.629976449161794E-5 14-15 9.259952898323587E-6 3.796580688312671E-4 0.0 1.2037938767820664E-4 6.481967028826511E-5 16-17 9.259952898323587E-6 3.8891802172959065E-4 0.0 1.435292699240156E-4 7.87095996357505E-5 18-19 9.259952898323587E-6 4.1206790397539965E-4 0.0 1.57419199271501E-4 1.0185948188155946E-4 20-21 9.259952898323587E-6 4.583676684670176E-4 0.0 1.7593910506814815E-4 1.0185948188155946E-4 22-23 9.259952898323587E-6 5.231873387552827E-4 0.0 2.0834894021228072E-4 1.2963934057653022E-4 24-25 9.259952898323587E-6 5.741170796960623E-4 0.0 2.777985869497076E-4 1.527892228223392E-4 26-27 9.259952898323587E-6 6.111568912893567E-4 0.0 4.954074800603119E-4 1.57419199271501E-4 28-29 9.259952898323587E-6 6.111568912893567E-4 0.0 0.0015001123695284212 1.57419199271501E-4 30-31 9.259952898323587E-6 6.435667264334894E-4 0.0 0.0037502809238210526 1.6667915216982457E-4 32-33 9.259952898323587E-6 6.667166086792983E-4 0.0 0.007926519680964991 2.0371896376311893E-4 34-35 9.259952898323587E-6 7.917259728066667E-4 0.0 0.013612130760535673 2.222388695597661E-4 36-37 9.259952898323587E-6 9.167353369340352E-4 0.0 0.021311781595491734 2.222388695597661E-4 38-39 9.259952898323587E-6 9.398852191798441E-4 0.0 0.037294460297998246 2.361287989072515E-4 40-41 9.259952898323587E-6 0.0010463746775105653 0.0 0.0717646349620078 2.5001872825473686E-4 42-43 9.259952898323587E-6 0.001055634630408889 0.0 0.08598329263738366 2.5001872825473686E-4 44-45 9.259952898323587E-6 0.0011482341593921246 0.0 0.10400779095397053 2.5927868115306044E-4 46-47 9.259952898323587E-6 0.001231573735477037 0.0 0.12540754210199634 2.91688516297193E-4 48-49 9.259952898323587E-6 0.0012454636648245223 0.0 0.14409412705081337 3.0557844564467837E-4 50-51 9.259952898323587E-6 0.0013704730289518909 0.0 0.16371596724236104 3.0557844564467837E-4 52-53 9.259952898323587E-6 0.0013797329818502145 0.0 0.19016702269642236 3.194683749921638E-4 54-55 9.259952898323587E-6 0.001388992934748538 0.0 0.2450924333128287 3.3798828078881093E-4 56-57 9.259952898323587E-6 0.0014260327463418326 0.0 0.30479597962477 3.426182572379727E-4 58-59 9.259952898323587E-6 0.0014352926992401561 0.0 0.363087383119717 3.518782101362963E-4 60-61 9.259952898323587E-6 0.0014769624872826123 0.0 0.4024329229846939 3.611381630346199E-4 62-63 9.259952898323587E-6 0.0015047423459775828 0.0 0.41971199509296575 3.796580688312671E-4 64-65 9.259952898323587E-6 0.0016760514745965693 0.0 0.4351946363389628 3.889180217295907E-4 66-67 9.259952898323587E-6 0.0016853114274948929 0.0 0.442125711083358 4.0280795107707607E-4 68-69 9.259952898323587E-6 0.0017501310977831581 0.0 0.44834839943103144 4.0743792752623786E-4 70-71 9.259952898323587E-6 0.0017779109564781289 0.0 0.45457571775515404 4.0743792752623786E-4 72-73 9.259952898323587E-6 0.0017871709093764524 0.0 0.45941404314452816 4.25957833322885E-4 74-75 9.259952898323587E-6 0.001865880509012203 0.0 0.46350231234913797 4.25957833322885E-4 76-77 9.259952898323587E-6 0.0019214402264021444 0.0 0.4672618532258574 4.25957833322885E-4 78-79 9.259952898323587E-6 0.0019399601321987915 0.0 0.47081304516236444 4.25957833322885E-4 80-81 9.259952898323587E-6 0.0019445901086479534 0.0 0.4724150170137744 4.537376920178558E-4 82-83 9.259952898323587E-6 0.0019445901086479534 0.0 0.47303543385796215 4.8151755071282657E-4 84-85 9.259952898323587E-6 0.0019631100144446006 0.0 0.47357714110251403 4.8151755071282657E-4 86-87 9.259952898323587E-6 0.001972369967342924 0.0 0.4737623401604806 4.8151755071282657E-4 88-89 9.259952898323587E-6 0.0020325596611820273 0.0 0.47393364928909953 4.954074800603119E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 12135 0.0 45.667236 1 GTATCAA 21360 0.0 35.977787 1 TCAACGC 25495 0.0 29.495152 4 ATCAACG 25635 0.0 29.285282 3 CAACGCA 26005 0.0 29.014097 5 TATCAAC 26840 0.0 28.285612 2 AACGCAG 27010 0.0 28.075764 6 CTTATAC 14095 0.0 25.821405 1 ACGCAGA 31250 0.0 24.117655 7 CGCAGAG 31735 0.0 23.789028 8 TATACAC 18110 0.0 22.524162 3 GTACATG 31740 0.0 21.60159 1 TACATGG 31395 0.0 21.20615 2 ACATGGG 31775 0.0 20.40702 3 TTATACA 18840 0.0 20.395048 2 GCAGAGT 38350 0.0 19.586454 9 GAGTACT 20540 0.0 18.181799 12-13 AGAGTAC 33645 0.0 17.815147 10-11 CATGGGG 23270 0.0 17.619967 4 CAGAGTA 36805 0.0 17.514462 10-11 >>END_MODULE