##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138800_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 9864534 Sequences flagged as poor quality 0 Sequence length 19-101 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.41662951336576 33.0 31.0 34.0 31.0 34.0 2 32.61492909852609 34.0 31.0 34.0 31.0 34.0 3 32.69647811036994 34.0 31.0 34.0 31.0 34.0 4 36.16417957503111 37.0 35.0 37.0 35.0 37.0 5 35.974750353133764 37.0 35.0 37.0 35.0 37.0 6 36.04144220091897 37.0 35.0 37.0 35.0 37.0 7 36.04280516444061 37.0 35.0 37.0 35.0 37.0 8 36.028499268186415 37.0 35.0 37.0 35.0 37.0 9 37.89118492571469 39.0 38.0 39.0 35.0 39.0 10-11 37.76451056887228 39.0 37.5 39.0 35.0 39.0 12-13 37.77407315946196 39.0 37.5 39.0 35.0 39.0 14-15 39.095192535197306 40.0 38.5 41.0 36.0 41.0 16-17 39.06652524082739 40.0 38.0 41.0 36.0 41.0 18-19 39.13109666406948 40.0 38.5 41.0 36.0 41.0 20-21 39.15024112917837 40.0 39.0 41.0 36.0 41.0 22-23 39.11092871437194 40.0 39.0 41.0 36.0 41.0 24-25 39.08379840303827 40.0 39.0 41.0 36.0 41.0 26-27 38.994670050357556 40.0 39.0 41.0 36.0 41.0 28-29 38.932570747378534 40.0 38.0 41.0 35.0 41.0 30-31 38.80075506897499 40.0 38.0 41.0 35.0 41.0 32-33 38.671041950181625 40.0 38.0 41.0 35.0 41.0 34-35 38.63317222622354 40.0 38.0 41.0 35.0 41.0 36-37 38.58773685781735 40.0 38.0 41.0 35.0 41.0 38-39 38.515644007618235 40.0 38.0 41.0 34.5 41.0 40-41 38.43730201232707 40.0 38.0 41.0 34.0 41.0 42-43 38.46245836517573 40.0 38.0 41.0 34.0 41.0 44-45 38.407687967399184 40.0 38.0 41.0 34.0 41.0 46-47 38.36295148086025 40.0 38.0 41.0 34.0 41.0 48-49 38.32468306625792 40.0 38.0 41.0 34.0 41.0 50-51 38.2652212553146 40.0 38.0 41.0 34.0 41.0 52-53 38.01946414199482 40.0 37.0 41.0 33.0 41.0 54-55 37.87395628892121 40.0 37.0 41.0 33.0 41.0 56-57 37.780057503551134 39.0 37.0 41.0 33.0 41.0 58-59 37.654017902441346 39.0 36.0 41.0 33.0 41.0 60-61 37.469451487071865 39.0 36.0 41.0 33.0 41.0 62-63 37.2257165050352 39.0 35.5 40.0 32.0 41.0 64-65 36.99414162508185 38.5 35.0 40.0 32.0 41.0 66-67 36.73775348115755 38.0 35.0 40.0 31.5 41.0 68-69 36.50124308875651 37.5 35.0 40.0 31.0 41.0 70-71 36.18931049531496 37.0 35.0 39.5 31.0 41.0 72-73 35.899981590925016 36.5 34.5 39.0 31.0 41.0 74-75 35.44801449020257 36.0 34.0 39.0 30.5 40.0 76-77 33.51561972764138 34.5 32.0 36.5 27.5 39.0 78-79 34.70197666586764 35.0 34.0 37.0 30.0 39.0 80-81 34.67309773769773 35.0 34.0 37.0 31.0 39.0 82-83 34.399081110981335 35.0 34.0 36.5 30.0 39.0 84-85 34.11577796275144 35.0 34.0 36.0 30.0 37.0 86-87 33.88104434917483 35.0 34.0 36.0 30.0 37.0 88-89 33.73955446354162 35.0 34.0 35.0 30.0 36.5 90-91 33.57413458633318 35.0 33.5 35.0 30.0 36.0 92-93 33.5353389665126 35.0 33.0 35.0 30.0 36.0 94-95 33.402242615825 35.0 33.0 35.0 30.0 36.0 96-97 33.42597564431284 35.0 33.0 35.0 30.0 35.5 98-99 33.52460976392252 35.0 33.0 35.0 30.0 35.0 100-101 32.313355585901974 34.0 31.0 34.5 27.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 5.0 20 29.0 21 174.0 22 723.0 23 2593.0 24 7048.0 25 14831.0 26 28301.0 27 46404.0 28 69451.0 29 97270.0 30 131577.0 31 173564.0 32 228798.0 33 312548.0 34 458001.0 35 715265.0 36 1279380.0 37 2363686.0 38 2782813.0 39 1134669.0 40 17402.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.397799429755125 20.493598582558487 14.110681761551028 23.997920226135367 2 14.53165990060859 21.197161438760702 42.043223159078366 22.227955501552344 3 18.213274930360253 26.21705582270194 30.516634770625256 25.053034476312554 4 12.463539687239882 18.15704061019659 39.12890403997448 30.250515662589045 5 13.149440174135608 37.88452040529997 35.94846609497333 13.017573325591089 6 29.763839553630806 38.3546522472548 18.911366843462606 12.970141355651792 7 26.307253844935808 32.58220814080016 23.483390092223313 17.627147922040717 8 23.799735496882064 37.767126151118745 21.380209141151525 17.05292921084767 9 25.21945790850333 17.144783524492897 21.375931189451016 36.25982737755275 10-11 23.926857568740704 27.03392273775933 29.31120719944804 19.728012494051924 12-13 24.769452030339707 24.389947197167846 29.38889645253812 21.451704319954327 14-15 21.86227327623641 25.932518620264304 26.717189480675284 25.488018622824 16-17 21.646117947505626 29.071174645629128 27.43006150119357 21.85264590567168 18-19 21.71007267043735 28.331637358642585 28.887492303235003 21.070797667685063 20-21 22.378547419385626 27.54173272816364 28.74022459227813 21.3394952601726 22-23 22.076843517336684 27.553627491519308 28.609106696049942 21.760422295094067 24-25 21.909214054561126 27.67622515719208 28.682656022261742 21.73190476598505 26-27 21.933885577617566 27.822271533309912 28.589381173067967 21.65446171600455 28-29 21.845416198089424 27.79661447020661 28.67127902303167 21.6866903086723 30-31 22.126872126343613 27.7258864923133 28.523822572051927 21.62341880929116 32-33 21.934794870370833 27.78766526871755 28.503054818593554 21.774485042318066 34-35 21.933229986312696 27.914185337077 28.53599530721031 21.616589369399993 36-37 22.032700446050583 27.80837365011853 28.468355935472257 21.69056996835863 38-39 21.821954201071208 27.853397292220894 28.59603621440554 21.72861229230236 40-41 22.080678973939758 27.733374488576008 28.44418328030739 21.74176325717685 42-43 21.996659954912648 27.80153033035406 28.331066076065937 21.870743638667353 44-45 21.992981908283873 27.929301235646832 28.216997066504913 21.86071978956438 46-47 22.129607830019648 27.854171115931326 27.954493993171077 22.06172706087795 48-49 22.059315427027844 27.896047931701982 27.955019874926386 22.089616766343788 50-51 21.999941226420727 28.01602997386874 27.950114912197797 22.033913887512732 52-53 22.18124283493689 27.96742367959691 27.871614221981524 21.979719263484682 54-55 22.14604972483375 27.874118668001596 27.837356592632982 22.14247501453167 56-57 22.175184358216228 28.030766350773206 27.76841622538263 22.025633065627936 58-59 22.06983574263017 28.08856336935729 27.859354189164193 21.98224669884835 60-61 22.22097811230511 28.142037034157152 27.697319576703123 21.939665276834617 62-63 22.128839062279262 28.21144102780368 27.667091878477702 21.992628031439352 64-65 22.117145843214296 28.145401190943254 27.6743413569481 22.06311160889435 66-67 22.213250276022848 28.09179093129814 27.591527997088157 22.103430795590853 68-69 22.13427166904737 28.04858383064865 27.67848417869653 22.138660321607453 70-71 22.16886644127555 27.85913512639745 27.7372104265504 22.2347880057766 72-73 22.201308383104752 27.93929691856889 27.685331697252767 22.174063001073584 74-75 22.123581837281023 28.043667271890904 27.608280316397664 22.22447057443041 76-77 22.202684395518492 27.99413528436578 27.604732815413946 22.19844750470178 78-79 22.165480051668514 27.979740208429725 27.57524460317941 22.27953513672235 80-81 22.177223598655782 28.005081964073792 27.574778987095566 22.24291545017486 82-83 22.20103940257809 27.98827585971918 27.644090714070984 22.166594023631745 84-85 22.280726952360133 27.936251522942573 27.620919069513185 22.162102455184108 86-87 22.15509607999738 27.96219755358705 27.67154853194999 22.211157834465574 88-89 22.18111728649945 27.971785038189317 27.596807776208447 22.250289899102786 90-91 22.207713934401195 27.959152873850268 27.654365963483063 22.178767228265475 92-93 22.197171019318045 27.96318514211401 27.63346140444023 22.206182434127715 94-95 22.097184495629605 28.00170900066786 27.672949061801887 22.22815744190065 96-97 22.114947120530747 27.995989694946704 27.705313238974753 22.18374994554779 98-99 22.373669010757293 28.553910286501655 27.7896501486515 21.28277055408955 100-101 26.37068918495017 35.63828310362733 28.37461648113553 9.616411230286968 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2640.0 1 2126.5 2 2360.5 3 3272.0 4 4258.0 5 6651.0 6 8773.5 7 10468.0 8 11676.5 9 11539.5 10 10492.0 11 9429.0 12 10173.5 13 13334.0 14 20389.0 15 29909.5 16 37698.5 17 42584.0 18 44459.0 19 43696.5 20 41915.5 21 40722.5 22 42287.0 23 48396.0 24 59032.5 25 74551.0 26 94576.5 27 116375.0 28 139158.0 29 162460.5 30 185009.5 31 207270.0 32 228423.5 33 247358.0 34 266741.0 35 286504.5 36 307328.5 37 326640.5 38 342784.0 39 357579.5 40 371808.0 41 385838.0 42 397268.5 43 407710.5 44 417059.0 45 424724.5 46 432544.0 47 438491.0 48 436281.5 49 426764.0 50 415549.0 51 399558.0 52 377091.5 53 353380.0 54 329259.0 55 303650.5 56 276405.0 57 247269.5 58 218315.0 59 188576.0 60 156939.0 61 127217.5 62 101530.0 63 79087.0 64 59581.0 65 44600.0 66 33686.0 67 25911.0 68 19926.5 69 14511.0 70 10481.0 71 7589.0 72 5350.0 73 3729.0 74 2605.5 75 1799.0 76 1232.5 77 852.5 78 586.5 79 391.5 80 265.0 81 176.0 82 123.5 83 89.5 84 73.0 85 58.5 86 47.5 87 40.5 88 30.0 89 19.5 90 12.5 91 10.0 92 8.0 93 4.0 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0010137326304516768 3 0.0019869159556852862 4 4.156303784851874E-4 5 3.852183995716371E-4 6 5.474156204439054E-4 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0010238699567561933 14-15 8.059174412090829E-4 16-17 1.0137326304516766E-4 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 4.5645870813665034E-5 28-29 2.131429851446444E-4 30-31 3.0491061596111536E-5 32-33 0.0011973543055459669 34-35 0.002044746726168796 36-37 0.0012172571939129745 38-39 7.654733058511176E-4 40-41 3.127297097446109E-5 42-43 4.203163258636817E-5 44-45 7.106824105095715E-4 46-47 5.360559543782075E-6 48-49 0.0 50-51 0.0 52-53 0.0010108944593040406 54-55 0.003641498945805573 56-57 0.006260261673303145 58-59 0.004665197727484782 60-61 2.5918889427425815E-4 62-63 2.9116111149706135E-5 64-65 1.0597245446216448E-4 66-67 1.9655253992339455E-4 68-69 6.02836853779992E-6 70-71 8.539845608131251E-5 72-73 6.171094076971563E-6 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86-87 4.0312846501513446E-5 88-89 3.677569502488182E-4 90-91 1.5202352992555547E-4 92-93 4.3512872827242594E-4 94-95 2.6408644220175575E-4 96-97 0.0 98-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 188.0 20-21 633.0 22-23 1430.0 24-25 2869.0 26-27 4874.0 28-29 9875.0 30-31 24588.0 32-33 29935.0 34-35 40554.0 36-37 63636.0 38-39 74623.0 40-41 74734.0 42-43 84972.0 44-45 99069.0 46-47 99715.0 48-49 94048.0 50-51 86561.0 52-53 83841.0 54-55 91355.0 56-57 95185.0 58-59 96632.0 60-61 95699.0 62-63 93044.0 64-65 95941.0 66-67 102130.0 68-69 97288.0 70-71 95902.0 72-73 91724.0 74-75 92852.0 76-77 90486.0 78-79 97241.0 80-81 98097.0 82-83 94579.0 84-85 94170.0 86-87 98555.0 88-89 104687.0 90-91 110680.0 92-93 115053.0 94-95 134314.0 96-97 201383.0 98-99 817729.0 100-101 5883663.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 87.2945290092683 #Duplication Level Percentage of deduplicated Percentage of total 1 90.86957711992014 79.32416935954812 2 6.595237135704311 11.514562389314872 3 1.4957711356893733 3.917179103869866 4 0.5047517121142373 1.7624825190253657 5 0.2246769463425574 0.9806534105107095 6 0.11068886844081448 0.5797519582265857 7 0.05929076661606676 0.36230316824435976 8 0.04130036667727107 0.28842368456019657 9 0.02313099380434895 0.18172882887002503 >10 0.07410834066081806 0.9820752427578211 >50 0.0012933384511977031 0.07346058222304766 >100 1.5623689878898868E-4 0.02575796128726416 >500 1.703867999688407E-5 0.007451791561790856 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.0137326304516767E-5 2 0.0 1.0137326304516767E-5 0.0 0.0 1.0137326304516767E-5 3 0.0 1.0137326304516767E-5 0.0 0.0 1.0137326304516767E-5 4 0.0 4.054930521806707E-5 0.0 1.0137326304516767E-5 1.0137326304516767E-5 5 0.0 5.0686631522583836E-5 0.0 1.0137326304516767E-5 1.0137326304516767E-5 6 0.0 5.0686631522583836E-5 0.0 1.0137326304516767E-5 1.0137326304516767E-5 7 0.0 6.08239578271006E-5 0.0 3.04119789135503E-5 1.0137326304516767E-5 8 0.0 6.08239578271006E-5 0.0 3.04119789135503E-5 2.0274652609033534E-5 9 0.0 2.128838523948521E-4 0.0 4.054930521806707E-5 4.054930521806707E-5 10-11 0.0 2.128838523948521E-4 0.0 4.054930521806707E-5 4.054930521806707E-5 12-13 0.0 2.3315850500388563E-4 0.0 5.0686631522583836E-5 4.054930521806707E-5 14-15 0.0 3.3960043120131165E-4 0.0 7.096128413161736E-5 4.054930521806707E-5 16-17 0.0 3.4466909435357007E-4 0.0 7.096128413161736E-5 4.054930521806707E-5 18-19 0.0 3.497377575058285E-4 0.0 7.096128413161736E-5 4.054930521806707E-5 20-21 0.0 3.5480642065808686E-4 0.0 8.616727358839252E-5 4.561796837032545E-5 22-23 0.0 4.2069904163744584E-4 0.0 1.1151058934968445E-4 6.08239578271006E-5 24-25 0.0 4.612483468555129E-4 0.0 1.875405366335602E-4 8.616727358839252E-5 26-27 0.0 4.865916626168048E-4 0.0 2.2302117869936887E-4 9.12359367406509E-5 28-29 0.0 4.865916626168048E-4 0.0 4.3590503109422094E-4 9.12359367406509E-5 30-31 0.0 5.271409678348719E-4 0.0 0.0014040196931755721 9.630459989290929E-5 32-33 0.0 5.474156204439054E-4 0.0 0.0031222965017911643 1.1151058934968443E-4 34-35 0.0 6.183769045755228E-4 0.0 0.005403194920307436 1.1151058934968443E-4 36-37 0.0 7.045441781639154E-4 0.0 0.009118525010912832 1.1151058934968443E-4 38-39 0.0 7.197501676206905E-4 0.0 0.014638299183722212 1.216479156542012E-4 40-41 0.0 7.805741254477911E-4 0.0 0.02074603828219356 1.3178524195871797E-4 42-43 0.0 8.059174412090829E-4 0.0 0.026027585286846802 1.3178524195871797E-4 44-45 0.0 8.667413990361835E-4 0.0 0.031942715185532336 1.3178524195871797E-4 46-47 0.0 9.427713463200593E-4 0.0 0.03815182754704885 1.3178524195871797E-4 48-49 0.0 9.579773357768346E-4 0.0 0.044142987393018265 1.5205989456775151E-4 50-51 0.0 0.0010542819356697437 0.0 0.05033182510192574 1.5205989456775151E-4 52-53 0.0 0.0010644192619742605 0.0 0.05639901489517903 1.6726588402452664E-4 54-55 0.0 0.0010694879251265188 0.0 0.06291224704583105 1.824718734813018E-4 56-57 0.0 0.0011049685671923276 0.0 0.06889833822864821 1.824718734813018E-4 58-59 0.0 0.0011049685671923276 0.0 0.0747830561484202 1.824718734813018E-4 60-61 0.0 0.001125243219801361 0.0 0.08097696252047994 2.0274652609033534E-4 62-63 0.0 0.0011607238618671699 0.0 0.08678565049296805 2.3315850500388563E-4 64-65 0.0 0.0012975777669781462 0.0 0.09223953204479807 2.3822716815614402E-4 66-67 0.0 0.0013026464301304046 0.0 0.09801780803837262 2.432958313084024E-4 68-69 0.0 0.0013584017248052468 0.0 0.10390759462129687 2.432958313084024E-4 70-71 0.0 0.0013685390511097636 0.0 0.10945778077301979 2.5343315761291915E-4 72-73 0.0 0.0013685390511097636 0.0 0.11471398446191172 2.9398246283098624E-4 74-75 0.0 0.001388813703718797 0.0 0.11882467027839327 2.9398246283098624E-4 76-77 0.0 0.0014496376615458976 0.0 0.12246397042171481 2.9398246283098624E-4 78-79 0.0 0.0015003242930684815 0.0 0.12578394478644406 2.9398246283098624E-4 80-81 0.0 0.0015053929562207399 0.0 0.12738564234255767 3.04119789135503E-4 82-83 0.0 0.0015104616193729983 0.0 0.12800401924713323 3.2439444174453655E-4 84-85 0.0 0.001520598945677515 0.0 0.12849567957290228 3.2439444174453655E-4 86-87 0.0 0.0015814229035046156 0.0 0.12868322010953584 3.2439444174453655E-4 88-89 1.0137326304516767E-5 0.0016878648297020417 0.0 0.12876431871997196 3.2439444174453655E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 10640 0.0 43.860073 1 GTATCAA 17975 0.0 33.907475 1 TCAACGC 20105 0.0 29.227882 4 ATCAACG 20310 0.0 28.974964 3 CAACGCA 20675 0.0 28.462713 5 AACGCAG 21440 0.0 27.525919 6 TATCAAC 22140 0.0 27.092403 2 ACGCAGA 25075 0.0 23.552494 7 CGCAGAG 25400 0.0 23.184984 8 GTACATG 25190 0.0 20.226912 1 TACATGG 24820 0.0 19.936111 2 ACATGGG 24745 0.0 19.198612 3 CTTATAC 6675 0.0 19.067259 1 GCAGAGT 31055 0.0 18.868502 9 GAGTACT 17230 0.0 17.80864 12-13 CAGAGTA 29415 0.0 17.614374 10-11 CATGGGG 18055 0.0 17.168905 4 AGAGTAC 26695 0.0 17.143291 10-11 TATGCCG 4330 0.0 15.863305 42-43 GTACTTT 19965 0.0 15.411274 14-15 >>END_MODULE