##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138797_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 8491924 Sequences flagged as poor quality 0 Sequence length 19-101 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.3211199252372 33.0 31.0 34.0 31.0 34.0 2 32.50345916897042 34.0 31.0 34.0 31.0 34.0 3 32.62722817585273 34.0 31.0 34.0 31.0 34.0 4 36.15131258828977 37.0 35.0 37.0 35.0 37.0 5 35.97676203885009 37.0 35.0 37.0 35.0 37.0 6 36.016677610397835 37.0 35.0 37.0 35.0 37.0 7 35.99750633660876 37.0 35.0 37.0 35.0 37.0 8 35.98292872145347 37.0 35.0 37.0 35.0 37.0 9 37.82868935237762 39.0 38.0 39.0 35.0 39.0 10-11 37.707662598016654 39.0 37.0 39.0 35.0 39.0 12-13 37.73082254386638 39.0 37.0 39.0 35.0 39.0 14-15 39.05903556131685 40.0 38.0 41.0 36.0 41.0 16-17 39.012325946393304 40.0 38.0 41.0 36.0 41.0 18-19 39.068759388331785 40.0 38.5 41.0 36.0 41.0 20-21 39.06619584021469 40.0 39.0 41.0 36.0 41.0 22-23 39.03305436311008 40.0 39.0 41.0 36.0 41.0 24-25 39.02224066215467 40.0 39.0 41.0 36.0 41.0 26-27 38.93124027369208 40.0 38.0 41.0 35.0 41.0 28-29 38.84895339264591 40.0 38.0 41.0 35.0 41.0 30-31 38.71329231778039 40.0 38.0 41.0 35.0 41.0 32-33 38.630305161139404 40.0 38.0 41.0 35.0 41.0 34-35 38.59208191006168 40.0 38.0 41.0 35.0 41.0 36-37 38.49417855080017 40.0 38.0 41.0 34.0 41.0 38-39 38.46016292635568 40.0 38.0 41.0 34.0 41.0 40-41 38.45994461174959 40.0 38.0 41.0 34.0 41.0 42-43 38.42266053410644 40.0 38.0 41.0 34.0 41.0 44-45 38.316211222799026 40.0 38.0 41.0 34.0 41.0 46-47 38.26244591452662 40.0 38.0 41.0 34.0 41.0 48-49 38.23927239063735 40.0 38.0 41.0 34.0 41.0 50-51 38.16232859256354 40.0 37.5 41.0 33.0 41.0 52-53 38.027143152572016 40.0 37.0 41.0 33.0 41.0 54-55 37.85128015825351 40.0 37.0 41.0 33.0 41.0 56-57 37.72693283806497 39.0 37.0 41.0 33.0 41.0 58-59 37.50404859420265 39.0 36.0 41.0 32.5 41.0 60-61 37.337590250615555 39.0 36.0 40.0 32.0 41.0 62-63 37.12125137138593 39.0 35.0 40.0 32.0 41.0 64-65 36.793975819084565 38.0 35.0 40.0 31.0 41.0 66-67 36.718831633443045 38.0 35.0 40.0 31.0 41.0 68-69 36.48114361162032 37.5 35.0 40.0 31.0 41.0 70-71 36.15926327282363 37.0 35.0 39.5 31.0 41.0 72-73 35.840200747728915 36.5 34.5 39.0 31.0 41.0 74-75 35.432874992499805 36.0 34.0 39.0 30.5 40.0 76-77 33.390814488333405 34.5 32.0 36.5 27.5 39.0 78-79 34.56025357705823 35.0 34.0 37.0 30.0 39.0 80-81 34.5678913698673 35.0 34.0 37.0 30.0 39.0 82-83 34.284864584074285 35.0 34.0 36.0 30.0 38.5 84-85 34.03265227729922 35.0 34.0 36.0 30.0 37.0 86-87 33.829115808824355 35.0 34.0 35.5 30.0 37.0 88-89 33.59906946473522 35.0 33.0 35.0 29.5 36.5 90-91 33.439873700438596 35.0 33.0 35.0 29.0 36.0 92-93 33.37915040131418 35.0 33.0 35.0 29.0 36.0 94-95 33.36124206809844 35.0 33.0 35.0 29.5 36.0 96-97 33.39963550323321 35.0 33.0 35.0 30.0 35.5 98-99 33.43155779595307 35.0 33.0 35.0 30.0 35.0 100-101 32.195137372031866 34.0 31.0 34.5 27.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 7.0 20 32.0 21 155.0 22 691.0 23 2312.0 24 6146.0 25 13769.0 26 25696.0 27 43094.0 28 64414.0 29 89782.0 30 120218.0 31 158752.0 32 207912.0 33 283723.0 34 407732.0 35 628131.0 36 1108547.0 37 2031200.0 38 2371754.0 39 916935.0 40 10920.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.43318993434232 20.434379770709203 14.08690186110945 24.04552843383902 2 14.583099031754983 21.145341091478127 41.96342740293908 22.3081324738278 3 18.487803057093195 25.88825876070708 30.215417638619662 25.40852054358006 4 12.548007388668903 17.9678522718414 39.02644183495798 30.457698504531717 5 13.273435582735393 37.80275264145335 35.7534742453882 13.170337530423051 6 30.02816558414795 38.12728422910992 18.831280166897397 13.013270019844736 7 26.594514976817972 32.40999330658164 23.303164277023676 17.692327439576708 8 23.907712812340915 37.70962223572793 21.212174025478213 17.170490926452946 9 25.355841492959243 17.110985475239797 21.318258912921035 36.214914118879925 10-11 24.15187633612273 26.922226793887177 29.109175755500345 19.816721114489745 12-13 24.869319571511625 24.28877215802967 29.256135759504442 21.585772510954264 14-15 21.94344426206854 25.82168810164152 26.64297435086409 25.591893285425854 16-17 21.763631083724945 28.98333560609326 27.288987194587584 21.96404611559422 18-19 21.849512548628557 28.308137237215032 28.71246257031975 21.12988764383666 20-21 22.555849445687596 27.489945560027728 28.556470173363905 21.39773482092077 22-23 22.255874421479124 27.40646871651763 28.429158482700835 21.908498379302415 24-25 22.05376509445359 27.52408230275058 28.4889528946265 21.933199708169333 26-27 22.047992341249017 27.693033414294334 28.39288195268925 21.866092291767398 28-29 21.99188411949477 27.789842030709455 28.40245687425102 21.815816975544756 30-31 22.3049319294281 27.58961102884622 28.2964684408879 21.808988600837775 32-33 22.030846012349347 27.777374482981664 28.27625343529205 21.91552606937694 34-35 22.13466938897451 27.79033880183517 28.27497804791704 21.80001376127328 36-37 22.172118380806502 27.747472339303275 28.2388026613895 21.841606618500727 38-39 21.99249287482557 27.832915682507714 28.337044938298227 21.837546504368486 40-41 22.229652883248814 27.680879908897293 28.190651295551657 21.89881591230224 42-43 22.145218585578004 27.756221123253923 28.081531563854483 22.017028727313594 44-45 22.1856758853084 27.828404498829435 27.969541896138217 22.01637771972395 46-47 22.24725177058013 27.780123408782565 27.75158027173316 22.221044548904135 48-49 22.162818035988966 27.88215759534458 27.7975098394256 22.157514529240853 50-51 22.171408368011473 27.954516209683288 27.73193047541927 22.142144946885967 52-53 22.328999846177354 27.870499367059743 27.62099491045435 22.179505876308557 54-55 22.29189572291665 27.788829429032084 27.64125340490632 22.27802144314495 56-57 22.281424285372452 27.914445849756643 27.626031085739527 22.17809877913138 58-59 22.285521022043156 27.939187871229237 27.596762926551634 22.17852818017597 60-61 22.361051797865475 27.916426688783602 27.592170992002053 22.13035052134887 62-63 22.322616869497026 27.94430211330838 27.556266222772802 22.17681479442179 64-65 22.298383997540448 27.901406556243035 27.55982805096982 22.240381395246697 66-67 22.347244500263496 27.93714027719813 27.421999945315957 22.29361527722242 68-69 22.29356354654216 27.913723687840246 27.515136247466 22.277576518151594 70-71 22.285900857963348 27.733266446133126 27.57255952611461 22.408273169788917 72-73 22.354619496450212 27.752091222387353 27.496583646594917 22.396705634567514 74-75 22.21701436904467 27.854382510262642 27.51399738818689 22.4146057325058 76-77 22.32108407743423 27.851010220129545 27.438485790951955 22.389419911484268 78-79 22.317302917308517 27.88829302195198 27.390516401351633 22.40388765938787 80-81 22.318020277116673 27.850216524270678 27.416164822435313 22.415598376177336 82-83 22.349870816156 27.837852023778353 27.492248854757356 22.32002830530829 84-85 22.414658943305774 27.8149924401149 27.441079277559226 22.329269339020094 86-87 22.267621701330633 27.86106442910673 27.50364736082159 22.36766650874105 88-89 22.36618068074891 27.771490965898998 27.46744390092917 22.39488445242292 90-91 22.38155401595745 27.789656109065263 27.47377756293429 22.355012312042987 92-93 22.38812920379898 27.780469564581484 27.50224265466037 22.32915857695917 94-95 22.279680336076186 27.861417266110873 27.5001540421451 22.358748355667846 96-97 22.277176619207047 27.845264447599092 27.532019562316695 22.345539370877162 98-99 22.502154789104292 28.409581744374407 27.669419904654468 21.418843561866836 100-101 26.653703874088762 35.42275333043285 28.219399155838783 9.704143639639607 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1619.0 1 1431.5 2 1855.0 3 2593.0 4 3471.5 5 5506.0 6 7181.0 7 8265.5 8 8937.5 9 8729.5 10 7976.0 11 7287.0 12 7849.0 13 10296.0 14 15922.0 15 23498.0 16 29796.5 17 33540.0 18 34641.5 19 33890.5 20 32515.5 21 31698.0 22 32911.0 23 37539.5 24 46153.5 25 59052.0 26 75780.0 27 94163.5 28 113698.5 29 133385.5 30 151182.0 31 168992.0 32 187236.0 33 205428.0 34 224314.5 35 242710.5 36 263669.0 37 282965.0 38 298455.0 39 312701.5 40 326284.5 41 340056.0 42 350191.0 43 358106.0 44 366829.5 45 373907.0 46 376825.0 47 377914.0 48 376021.5 49 370105.0 50 362118.0 51 349741.0 52 332052.0 53 312018.5 54 290942.5 55 268706.5 56 246238.5 57 222399.0 58 197088.5 59 170326.5 60 142213.5 61 115803.5 62 91987.0 63 71196.0 64 53376.5 65 39800.0 66 30195.0 67 23118.5 68 17667.5 69 12800.5 70 9059.0 71 6474.0 72 4514.5 73 3061.0 74 2053.5 75 1363.5 76 956.5 77 685.5 78 497.0 79 372.0 80 263.5 81 181.0 82 139.0 83 96.0 84 63.0 85 51.0 86 42.0 87 30.5 88 21.5 89 14.0 90 9.0 91 7.0 92 4.5 93 3.0 94 1.5 95 1.0 96 1.0 97 1.0 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.004415960387775491 3 1.1775894367401309E-5 4 2.3551788734802617E-5 5 9.420715493921047E-5 6 0.0 7 0.0 8 4.8281166906345366E-4 9 1.2953483804141442E-4 10-11 2.3551788734802617E-5 12-13 2.9439735918503274E-4 14-15 5.887947183700654E-6 16-17 5.416911409004603E-4 18-19 0.0 20-21 6.476949361561213E-5 22-23 0.0 24-25 0.0 26-27 5.8920686157315406E-5 28-29 5.896026172696022E-6 30-31 8.85696654446218E-5 32-33 3.9671418809214407E-4 34-35 0.0 36-37 3.643009658693592E-4 38-39 0.0011913255614783556 40-41 0.0 42-43 0.0 44-45 3.2737789700098375E-4 46-47 0.0 48-49 0.0 50-51 3.827784162734416E-5 52-53 5.797302347739973E-4 54-55 0.003252186721568782 56-57 0.003825750349937835 58-59 0.004279796337517765 60-61 0.001101892836890297 62-63 1.3581933420819094E-5 64-65 6.313542026092497E-4 66-67 0.0 68-69 0.0 70-71 0.0 72-73 2.875710084712668E-4 74-75 2.908962914722661E-5 76-77 0.0 78-79 0.0 80-81 6.184860968850928E-4 82-83 0.0 84-85 0.0 86-87 2.3508604345095343E-5 88-89 0.0 90-91 0.0011374886573826079 92-93 2.0495796599058686E-4 94-95 8.337869134142308E-6 96-97 0.0 98-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 162.0 20-21 585.0 22-23 1196.0 24-25 3058.0 26-27 4724.0 28-29 9065.0 30-31 22572.0 32-33 27388.0 34-35 37515.0 36-37 58316.0 38-39 68541.0 40-41 67689.0 42-43 75141.0 44-45 88260.0 46-47 87202.0 48-49 83536.0 50-51 76599.0 52-53 73571.0 54-55 80040.0 56-57 82510.0 58-59 82029.0 60-61 80410.0 62-63 76547.0 64-65 79493.0 66-67 83446.0 68-69 84498.0 70-71 83051.0 72-73 79392.0 74-75 81692.0 76-77 79353.0 78-79 83848.0 80-81 85571.0 82-83 81967.0 84-85 81420.0 86-87 85451.0 88-89 91568.0 90-91 101625.0 92-93 98950.0 94-95 113292.0 96-97 175398.0 98-99 714819.0 100-101 5020434.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 87.02932572243046 #Duplication Level Percentage of deduplicated Percentage of total 1 90.9501558565284 79.15330738543625 2 6.48898024734722 11.29463151105597 3 1.4786426173839569 3.8605580992612647 4 0.5007980613107937 1.7433647039591504 5 0.2259128696025582 0.9830522356764997 6 0.11946048255972487 0.623793914858941 7 0.06336127077978179 0.3860002071016521 8 0.04483778392933254 0.3121761681806271 9 0.030940095300547876 0.2423426068614979 >10 0.09491698851009185 1.2541075970751074 >50 0.0017504941139982813 0.10145373701553775 >100 2.2276035869780623E-4 0.03452170383568085 >500 2.0472274896997025E-5 0.010690129681739343 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 4.710357746960524E-5 0.0 0.0 0.0 5 0.0 4.710357746960524E-5 0.0 0.0 0.0 6 0.0 4.710357746960524E-5 0.0 0.0 0.0 7 0.0 5.887947183700655E-5 0.0 0.0 0.0 8 0.0 7.065536620440786E-5 0.0 0.0 0.0 9 0.0 1.177589436740131E-4 0.0 2.355178873480262E-5 0.0 10-11 0.0 1.177589436740131E-4 0.0 2.355178873480262E-5 0.0 12-13 0.0 1.177589436740131E-4 0.0 3.532768310220393E-5 0.0 14-15 0.0 2.1196609861322355E-4 0.0 5.887947183700655E-5 0.0 16-17 1.177589436740131E-5 2.2374199298062487E-4 0.0 5.887947183700655E-5 0.0 18-19 1.177589436740131E-5 2.6495762326652944E-4 0.0 6.476741902070721E-5 5.887947183700655E-6 20-21 1.177589436740131E-5 3.0617325355243406E-4 0.0 9.420715493921048E-5 2.355178873480262E-5 22-23 1.7663841551101967E-5 3.2383709510353605E-4 0.0 1.1187099649031244E-4 4.121563028590458E-5 24-25 2.355178873480262E-5 3.4150093665463797E-4 0.0 1.4719867959251637E-4 7.065536620440786E-5 26-27 2.355178873480262E-5 3.4150093665463797E-4 0.0 2.1785404579692421E-4 7.65433133881085E-5 28-29 2.355178873480262E-5 3.4738888383833863E-4 0.0 6.358982958396708E-4 8.243126057180916E-5 30-31 2.355178873480262E-5 4.7692372187975305E-4 0.0 0.002196204299520344 8.831920775550982E-5 32-33 2.355178873480262E-5 4.828116690634537E-4 0.0 0.005369807831534998 9.420715493921048E-5 34-35 2.355178873480262E-5 5.475790880841609E-4 0.0 0.009226413236858926 1.0598304930661179E-4 36-37 2.355178873480262E-5 6.123465071048681E-4 0.0 0.015538292617786028 1.0598304930661179E-4 38-39 2.355178873480262E-5 6.123465071048681E-4 0.0 0.02542415593921943 1.177589436740131E-4 40-41 2.355178873480262E-5 7.065536620440786E-4 0.0 0.03468000891199686 1.2953483804141442E-4 42-43 2.355178873480262E-5 7.183295564114799E-4 0.0 0.042528642507869835 1.3542278522511508E-4 44-45 2.355178873480262E-5 8.066487641669898E-4 0.0 0.051136821290440185 1.4719867959251637E-4 46-47 2.355178873480262E-5 8.831920775550983E-4 0.0 0.060963805140036575 1.6486252114361833E-4 48-49 2.355178873480262E-5 8.890800247387989E-4 0.0 0.0702255460599977 1.6486252114361833E-4 50-51 3.532768310220393E-5 9.538474437595061E-4 0.0 0.07885138868411917 1.6486252114361833E-4 52-53 3.532768310220393E-5 9.656233381269074E-4 0.0 0.08774807687869085 1.8841430987842097E-4 54-55 3.532768310220393E-5 9.71511285310608E-4 0.0 0.09645635076338413 2.1785404579692421E-4 56-57 3.532768310220393E-5 9.773992324943086E-4 0.0 0.10417544952121569 2.355178873480262E-4 58-59 3.532768310220393E-5 9.950630740454107E-4 0.0 0.11121154640573797 2.472937817154275E-4 60-61 3.532768310220393E-5 0.0010362787043313153 0.0 0.11824175534307654 2.472937817154275E-4 62-63 3.532768310220393E-5 0.0010716063874335192 0.0 0.12490691155502569 2.6495762326652944E-4 64-65 3.532768310220393E-5 0.0011893653311075322 0.0 0.13153674008387262 2.708455704502301E-4 66-67 3.532768310220393E-5 0.0011893653311075322 0.0 0.13803703377467813 2.7673351763393076E-4 68-69 3.532768310220393E-5 0.0012188050670260357 0.0 0.14462564667323918 3.002853063687334E-4 70-71 3.532768310220393E-5 0.001242356855760838 0.0 0.15074911174428784 3.0617325355243406E-4 72-73 3.532768310220393E-5 0.001248244802944539 0.0 0.15603060036806735 3.0617325355243406E-4 74-75 3.532768310220393E-5 0.0012600206973119401 0.0 0.16041712101992434 3.120612007361347E-4 76-77 3.532768310220393E-5 0.0013071242747815454 0.0 0.16450924431259628 3.2383709510353605E-4 78-79 3.532768310220393E-5 0.0013542278522511507 0.0 0.16826575461579732 3.2972504228723665E-4 80-81 3.532768310220393E-5 0.0013542278522511507 0.0 0.16994970751033572 3.4150093665463797E-4 82-83 3.532768310220393E-5 0.0013601157994348513 0.0 0.17060326964772649 3.650527253894406E-4 84-85 3.532768310220393E-5 0.0013895555353533547 0.0 0.17111552105270844 3.650527253894406E-4 86-87 3.532768310220393E-5 0.001401331429720756 0.0 0.17135103894005646 3.650527253894406E-4 88-89 3.532768310220393E-5 0.001448435007190361 0.0 0.17139814251752605 3.8271656694054254E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 8305 0.0 42.742653 1 GTATCAA 14390 0.0 34.7917 1 TCAACGC 16630 0.0 29.047146 4 ATCAACG 16815 0.0 28.827143 3 CAACGCA 17075 0.0 28.26562 5 AACGCAG 17710 0.0 27.228668 6 TATCAAC 18115 0.0 26.990425 2 ACGCAGA 20720 0.0 23.293352 7 CGCAGAG 20995 0.0 22.968311 8 GTACATG 22045 0.0 21.11543 1 TACATGG 21905 0.0 20.39043 2 ACATGGG 22340 0.0 19.730364 3 GCAGAGT 26045 0.0 18.402363 9 CATGGGG 16410 0.0 17.626226 4 GAGTACT 13655 0.0 17.396637 12-13 AGAGTAC 22690 0.0 17.175432 10-11 CAGAGTA 25270 0.0 16.32465 10-11 GTGGTAT 4885 0.0 16.281494 1 TATACCG 655 0.0 15.976756 5 GTACTTT 15825 0.0 15.170281 14-15 >>END_MODULE