##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138794_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 11174888 Sequences flagged as poor quality 0 Sequence length 19-101 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.3879620091047 33.0 31.0 34.0 31.0 34.0 2 32.5486105990503 34.0 31.0 34.0 31.0 34.0 3 32.66603208909118 34.0 31.0 34.0 31.0 34.0 4 36.172631260375944 37.0 35.0 37.0 35.0 37.0 5 36.016004366218255 37.0 35.0 37.0 35.0 37.0 6 36.05972829436859 37.0 35.0 37.0 35.0 37.0 7 36.035718747248296 37.0 35.0 37.0 35.0 37.0 8 36.022742867758495 37.0 35.0 37.0 35.0 37.0 9 37.86151673287464 39.0 38.0 39.0 35.0 39.0 10-11 37.74468612123898 39.0 37.5 39.0 35.0 39.0 12-13 37.762292114247586 39.0 37.5 39.0 35.0 39.0 14-15 39.09443454824782 40.0 38.5 41.0 36.0 41.0 16-17 39.046046054331825 40.0 38.0 41.0 36.0 41.0 18-19 39.10745897408547 40.0 38.5 41.0 36.0 41.0 20-21 39.10680749775746 40.0 39.0 41.0 36.0 41.0 22-23 39.069879527331295 40.0 39.0 41.0 36.0 41.0 24-25 39.05299066302034 40.0 39.0 41.0 36.0 41.0 26-27 38.9579587254802 40.0 38.5 41.0 35.5 41.0 28-29 38.88117900628288 40.0 38.0 41.0 35.0 41.0 30-31 38.74417768865974 40.0 38.0 41.0 35.0 41.0 32-33 38.655657638398836 40.0 38.0 41.0 35.0 41.0 34-35 38.60774705878891 40.0 38.0 41.0 35.0 41.0 36-37 38.51083860332605 40.0 38.0 41.0 34.5 41.0 38-39 38.46758998803581 40.0 38.0 41.0 34.0 41.0 40-41 38.46858214349004 40.0 38.0 41.0 34.0 41.0 42-43 38.43185921545133 40.0 38.0 41.0 34.0 41.0 44-45 38.32236299130708 40.0 38.0 41.0 34.0 41.0 46-47 38.26197554043176 40.0 38.0 41.0 34.0 41.0 48-49 38.232293697926515 40.0 38.0 41.0 34.0 41.0 50-51 38.146943435668454 40.0 37.5 41.0 33.0 41.0 52-53 38.01677634000626 40.0 37.0 41.0 33.0 41.0 54-55 37.837563138536254 40.0 37.0 41.0 33.0 41.0 56-57 37.70569749116932 39.0 36.5 41.0 33.0 41.0 58-59 37.479243966066235 39.0 36.0 41.0 32.5 41.0 60-61 37.30483747433432 39.0 36.0 40.5 32.0 41.0 62-63 37.08793000372037 39.0 35.0 40.0 32.0 41.0 64-65 36.77406958984861 38.0 35.0 40.0 31.0 41.0 66-67 36.69888192957478 38.0 35.0 40.0 31.0 41.0 68-69 36.4630645571368 37.0 35.0 40.0 31.0 41.0 70-71 36.152427664470245 37.0 35.0 39.5 31.0 41.0 72-73 35.837712377026946 36.5 34.5 39.0 31.0 41.0 74-75 35.440594645398534 36.0 34.0 39.0 30.5 40.0 76-77 33.40150424976632 34.5 32.0 36.5 27.5 39.0 78-79 34.59388894647117 35.0 34.0 37.0 30.0 39.0 80-81 34.60243105604437 35.0 34.0 37.0 30.0 39.0 82-83 34.319924171120995 35.0 34.0 36.0 30.0 38.5 84-85 34.06643012328979 35.0 34.0 36.0 30.0 37.0 86-87 33.85999384797401 35.0 34.0 36.0 30.0 37.0 88-89 33.629608182612074 35.0 33.5 35.0 29.5 36.5 90-91 33.471918358031196 35.0 33.0 35.0 29.5 36.0 92-93 33.41168755398979 35.0 33.0 35.0 29.0 36.0 94-95 33.38764436870332 35.0 33.0 35.0 30.0 36.0 96-97 33.42435325140504 35.0 33.0 35.0 30.0 35.5 98-99 33.45478904607096 35.0 33.0 35.0 30.0 35.0 100-101 32.168542160779474 33.5 31.0 34.5 27.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 2.0 18 0.0 19 9.0 20 48.0 21 219.0 22 917.0 23 3194.0 24 8686.0 25 19239.0 26 35444.0 27 57801.0 28 86134.0 29 119015.0 30 158089.0 31 206297.0 32 269885.0 33 367311.0 34 534106.0 35 823169.0 36 1471002.0 37 2686890.0 38 3084779.0 39 1223537.0 40 19115.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.478599159114616 20.338253054527257 14.021661783097962 24.161486003260165 2 14.387719461055632 21.10262571566719 42.08877051873113 22.42088430454604 3 18.239492189534417 26.178827187196134 30.344501300148423 25.237179323121023 4 12.310364921908809 18.192600478000486 38.96259683769424 30.53443776239646 5 13.02326522043462 37.99757813910809 35.83509368066479 13.14406295979249 6 29.743832779353134 38.24194032190748 18.93611819644188 13.07810870229751 7 26.38848396305788 32.503785720946055 23.293553061749357 17.81417725424671 8 24.047058541383162 37.40991711116939 21.320077133941968 17.222947213505474 9 25.418431973512007 16.84511012427432 21.2609268560051 36.47553104620857 10-11 23.997093302250523 26.91031908573877 29.140383201413204 19.952204410597503 12-13 24.803910312620445 24.326955834171002 29.228645439079738 21.640488414128818 14-15 21.917235322626947 25.818871741712314 26.661528956710796 25.602363978949942 16-17 21.673055571886884 28.997687752335803 27.333068989527458 21.996187686249854 18-19 21.66651789559403 28.251581951048728 28.853171899940826 21.22872825341642 20-21 22.425125957723235 27.422699223637498 28.663517199698763 21.48865761894051 22-23 22.049851413056043 27.474217953502077 28.587323429804357 21.888607203637527 24-25 21.855926189739368 27.549449181100954 28.76687876810069 21.827745861058983 26-27 21.83370717290642 27.71265926987441 28.63372624734396 21.81990730987521 28-29 21.65620081495146 27.716679244626985 28.668694105722704 21.958425834698854 30-31 22.01317858421509 27.552399995889854 28.595861252753878 21.83856016714118 32-33 21.7776911684535 27.794638555943063 28.56132450727939 21.866345768324045 34-35 21.876751070650595 27.883829609817518 28.63633223203771 21.60308708749418 36-37 21.927614311945103 27.747757933320255 28.444572020850163 21.880055733884483 38-39 21.8227180622542 27.766873446855406 28.607455130567054 21.80295336032334 40-41 22.01984192452721 27.628965821013747 28.551778361710213 21.799413892748838 42-43 21.993917766569567 27.686388099084542 28.42071658203369 21.898977552312207 44-45 21.94488031634497 27.91328378279438 28.230295460213245 21.9115404406474 46-47 22.12442245888168 27.749017294826768 27.92405903313216 22.202501213159394 48-49 22.034999834827175 27.844719978598185 27.960130908532637 22.160149278042002 50-51 21.956620473986845 28.020241400225448 27.921054585533923 22.10208354025378 52-53 22.08305780887838 27.91372371842144 27.878717050125513 22.124501422574664 54-55 22.06205478770866 27.844640021135596 27.83501374309501 22.25829144806073 56-57 22.203585079336598 27.96630047233666 27.688688060029236 22.14142638829751 58-59 22.015322869382555 28.11098564607677 27.843947091033368 22.029744393507308 60-61 22.19353824672881 28.157819789807604 27.665211096179586 21.983430867283992 62-63 22.04991291689053 28.207111037857658 27.626930403645446 22.116045641606362 64-65 22.04164421851769 28.141826901075756 27.6304512159386 22.186077664467952 66-67 22.107692144336248 28.13690438424207 27.502242755980568 22.25316071544112 68-69 22.07391876484108 28.101776324356255 27.58478537271687 22.239519538085794 70-71 22.08118511016532 27.824644369058042 27.67034609125667 22.423824429519964 72-73 22.136525389862474 27.861976769438762 27.616022117554547 22.385475723144218 74-75 21.999650377635433 27.961944301355413 27.615006282739092 22.423399038270063 76-77 22.132599115110494 27.939640098833774 27.503002186929653 22.424758599126083 78-79 22.154881935956375 27.927481678944233 27.47816444943337 22.439471935666024 80-81 22.124954948917136 27.9616117956631 27.49295001272014 22.420483242699625 82-83 22.167124589751296 27.887435398939026 27.59182071406118 22.353619297248496 84-85 22.31701588685296 27.890039012889762 27.476726249685985 22.31621885057129 86-87 22.080854827138165 27.946363357731425 27.576501184069098 22.39628063106132 88-89 22.20635162482704 27.889753585690958 27.51554209380757 22.388352695674435 90-91 22.17980816032867 27.902203380985867 27.59286080487132 22.325127653814143 92-93 22.159559438554595 27.88335215064092 27.620482491529746 22.336605919274735 94-95 22.045513113814337 27.953003040568714 27.659314305548982 22.342169540067964 96-97 22.004826642761348 27.97450326280795 27.72915850671826 22.291511587712442 98-99 22.239428479655373 28.579403963183026 27.78896206733583 21.392205489825773 100-101 23.069443211419404 31.101269674337225 24.84823927818335 20.981047836060025 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2402.0 1 2147.5 2 2826.0 3 4028.5 4 5639.5 5 9124.0 6 11993.5 7 14021.0 8 15225.0 9 14763.5 10 13338.5 11 12008.5 12 12851.5 13 16828.0 14 26260.0 15 38590.5 16 47889.5 17 52933.0 18 53657.0 19 51216.0 20 48087.0 21 45941.0 22 46849.0 23 52996.0 24 65068.0 25 82393.0 26 104263.0 27 128066.0 28 152390.0 29 178113.5 30 202206.0 31 226018.5 32 251490.5 33 276149.0 34 299212.5 35 321529.5 36 346099.5 37 369476.0 38 387395.0 39 401236.0 40 415428.0 41 427774.5 42 437081.5 43 447891.5 44 459549.5 45 470695.5 46 480364.0 47 489082.0 48 489326.0 49 481534.5 50 472298.0 51 456785.5 52 432293.0 53 405294.0 54 378707.5 55 348291.5 56 317679.0 57 285152.0 58 251636.0 59 219539.0 60 184197.0 61 149962.5 62 119364.5 63 92393.5 64 69463.0 65 51566.0 66 39132.0 67 29904.0 68 22521.0 69 16060.0 70 11175.5 71 8010.0 72 5596.5 73 3798.5 74 2592.5 75 1762.0 76 1232.0 77 840.0 78 581.5 79 420.5 80 294.0 81 210.0 82 157.0 83 112.5 84 86.5 85 71.0 86 58.0 87 45.0 88 29.5 89 17.0 90 12.0 91 8.5 92 5.5 93 4.5 94 3.5 95 3.0 96 3.0 97 3.0 98 1.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.004698033662619259 3 8.948635547846206E-5 4 3.5794542191384824E-5 5 8.948635547846206E-5 6 0.0 7 1.7897271095692412E-5 8 3.6689405746169446E-4 9 1.1633226212200068E-4 10-11 6.711476660884655E-5 12-13 2.4161315979184757E-4 14-15 0.0 16-17 4.2058587074877176E-4 18-19 4.474317773923103E-6 20-21 4.921925288932675E-5 22-23 0.0 24-25 0.0 26-27 8.507371010121354E-5 28-29 1.3441979175506633E-5 30-31 9.422816587567357E-5 32-33 3.958582253558799E-4 34-35 0.0 36-37 4.1252623678199074E-4 38-39 0.0011043650530706735 40-41 0.0 42-43 0.0 44-45 2.9454578351866727E-4 46-47 4.7246006649402975E-6 48-49 7.638043797688842E-5 50-51 3.4232158934031784E-4 52-53 6.373654368303223E-4 54-55 0.003519530053890534 56-57 0.0037521821020715467 58-59 0.004621684573482857 60-61 9.968868287010904E-4 62-63 2.0461853707874605E-5 64-65 5.791369132922935E-4 66-67 0.0 68-69 0.0 70-71 1.6065482908334373E-5 72-73 1.245941886020153E-4 74-75 5.4782540431843094E-5 76-77 5.540878998395251E-6 78-79 0.0 80-81 4.5965938445139136E-4 82-83 0.0 84-85 0.0 86-87 1.7672230316758235E-5 88-89 0.0 90-91 0.001109111746947973 92-93 1.7856706335442416E-4 94-95 0.0 96-97 0.0 98-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 253.0 20-21 826.0 22-23 1828.0 24-25 3930.0 26-27 6395.0 28-29 12125.0 30-31 27040.0 32-33 32785.0 34-35 44202.0 36-37 68119.0 38-39 80277.0 40-41 82658.0 42-43 93311.0 44-45 110140.0 46-47 110163.0 48-49 105704.0 50-51 96554.0 52-53 88871.0 54-55 96527.0 56-57 102067.0 58-59 102694.0 60-61 109000.0 62-63 103813.0 64-65 107653.0 66-67 114970.0 68-69 109005.0 70-71 108355.0 72-73 103166.0 74-75 103948.0 76-77 101264.0 78-79 108573.0 80-81 111200.0 82-83 107020.0 84-85 105178.0 86-87 111343.0 88-89 119649.0 90-91 132254.0 92-93 130036.0 94-95 149864.0 96-97 230950.0 98-99 945911.0 100-101 6695267.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 83.55982484435545 #Duplication Level Percentage of deduplicated Percentage of total 1 89.03420721412668 74.39682759968474 2 7.425657684902418 12.409733110091759 3 1.8820455117350838 4.717901799290668 4 0.7564031554960232 2.528196607398618 5 0.34154503877396075 1.4269721808205373 6 0.18888806698538377 0.9470072275492527 7 0.10734973216691936 0.6279087371869375 8 0.06989514507206879 0.46723408637543046 9 0.045341232658226184 0.34098349132336936 >10 0.14482316234927148 1.8239283060753058 >50 0.003166038444581022 0.17372830225025174 >100 6.040678458429294E-4 0.08101745857469776 >500 3.69780465477005E-5 0.017565771304063685 >1k 3.697139695454439E-5 0.04099532207440796 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 1.7897271095692412E-5 0.0 2 0.0 1.7897271095692412E-5 0.0 1.7897271095692412E-5 0.0 3 0.0 1.7897271095692412E-5 0.0 1.7897271095692412E-5 0.0 4 0.0 8.053771993061586E-5 0.0 1.7897271095692412E-5 0.0 5 0.0 8.948635547846207E-5 0.0 1.7897271095692412E-5 0.0 6 0.0 8.948635547846207E-5 0.0 1.7897271095692412E-5 0.0 7 0.0 8.948635547846207E-5 0.0 1.7897271095692412E-5 0.0 8 0.0 1.0738362657415448E-4 0.0 2.684590664353862E-5 0.0 9 0.0 2.4161315979184757E-4 0.0 8.053771993061586E-5 0.0 10-11 0.0 2.4161315979184757E-4 0.0 8.053771993061586E-5 0.0 12-13 0.0 2.4608747756577065E-4 0.0 8.053771993061586E-5 0.0 14-15 0.0 3.847913285573869E-4 0.0 8.501203770453896E-5 0.0 16-17 0.0 3.982142818791562E-4 0.0 8.948635547846207E-5 0.0 18-19 0.0 4.2506018852269485E-4 0.0 1.0290930880023138E-4 0.0 20-21 0.0 4.4743177739231033E-4 0.0 1.1185794434807758E-4 0.0 22-23 0.0 5.100722262272339E-4 0.0 1.6554975763515483E-4 0.0 24-25 0.0 5.995585817056958E-4 0.0 2.2819020647007825E-4 0.0 26-27 0.0 6.443017594449269E-4 0.0 3.5347110413992515E-4 0.0 28-29 0.0 6.4877607721885E-4 0.0 0.0012975521544377 0.0 30-31 0.0 7.38262432697312E-4 0.0 0.003847913285573869 0.0 32-33 0.0 7.472110682451582E-4 0.0 0.008774137154663205 0.0 34-35 0.0 8.63543330367159E-4 0.0 0.014917375458259625 0.0 36-37 0.0 9.977728635848521E-4 0.0 0.024465569587811528 0.0 38-39 0.0 0.0010514646768719294 0.0 0.04218834229032094 0.0 40-41 0.0 0.0011096308079329297 0.0 0.07879273599878585 0.0 42-43 0.0 0.0011498996678982376 0.0 0.09393382734574163 0.0 44-45 0.0 0.0012707062477941614 0.0 0.1141085261883609 0.0 46-47 0.0 0.0013333466966290847 0.0 0.13848460942069396 0.0 48-49 0.0 0.0013512439677247773 0.0 0.15891434437642687 0.0 50-51 0.0 0.0015346909964556244 0.0 0.1799525865494133 0.0 52-53 0.0 0.0015525882675513168 0.0 0.2073980517746576 0.0 54-55 0.0 0.0015704855386470093 0.0 0.25956412270082707 0.0 56-57 0.0 0.0015839084919687786 0.0 0.31831638939021134 0.0 58-59 0.0 0.001597331445290548 0.0 0.37932818655542677 0.0 60-61 0.0 0.0016241773519340866 0.0 0.4184605698061582 0.0 62-63 0.0 0.001646548940803702 0.0 0.4373958826254008 0.0 64-65 0.0 0.0018255216517606262 0.0 0.454783081494866 0.0 66-67 0.0 0.001861316193952011 0.0 0.4623312555794743 0.0 68-69 0.0 0.001950802549430473 0.0 0.46898904042707185 0.0 70-71 0.0 0.0019955457271697043 0.0 0.47552154437699956 0.0 72-73 0.0 0.0020134429982653964 0.0 0.48057304914375876 0.0 74-75 0.0 0.002080557764874243 0.0 0.4847654848979247 0.0 76-77 0.0 0.002165569802578782 0.0 0.4882509784438108 0.0 78-79 0.0 0.0022013643447701668 0.0 0.4915843451853835 0.0 80-81 0.0 0.0022013643447701668 0.0 0.4929042689286908 0.0 82-83 0.0 0.0022103129803180133 0.0 0.49346803296820513 0.0 84-85 0.0 0.002232684569187629 0.0 0.4940228483721716 0.0 86-87 0.0 0.0022729534291529366 0.0 0.4942599872141895 0.0 88-89 0.0 0.002389285691274937 0.0 0.49443895992514647 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 11970 0.0 44.132313 1 GTATCAA 20995 0.0 36.053967 1 ATCAACG 24780 0.0 29.779243 3 TCAACGC 24940 0.0 29.638948 4 CAACGCA 25335 0.0 29.026962 5 AACGCAG 26435 0.0 27.947168 6 TATCAAC 26815 0.0 27.8512 2 ACGCAGA 30325 0.0 24.264793 7 CGCAGAG 30630 0.0 23.981852 8 GTACATG 31905 0.0 21.450556 1 TACATGG 31700 0.0 21.309856 2 ACATGGG 31945 0.0 20.52453 3 GCAGAGT 37090 0.0 19.747944 9 CATGGGG 22655 0.0 18.67936 4 GAGTACT 20140 0.0 18.215378 12-13 AGAGTAC 32430 0.0 18.194727 10-11 CAGAGTA 35455 0.0 17.582474 10-11 CTTATAC 12780 0.0 16.078466 1 GTGGTAT 6665 0.0 15.889859 1 TATACTG 5850 0.0 15.794771 5 >>END_MODULE