##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138788_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 20482826 Sequences flagged as poor quality 0 Sequence length 19-101 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.227158254432275 33.0 31.0 34.0 30.0 34.0 2 32.353093611203846 34.0 31.0 34.0 31.0 34.0 3 32.40713478696738 34.0 31.0 34.0 30.0 34.0 4 36.031635136674986 37.0 35.0 37.0 35.0 37.0 5 35.91596330506347 37.0 35.0 37.0 35.0 37.0 6 35.93879804476199 37.0 35.0 37.0 35.0 37.0 7 35.860942332859736 37.0 35.0 37.0 35.0 37.0 8 35.82606945936073 37.0 35.0 37.0 35.0 37.0 9 37.47423461000938 39.0 37.0 39.0 35.0 39.0 10-11 37.372313468854344 39.0 37.0 39.0 34.0 39.0 12-13 37.337051025088044 39.0 37.0 39.0 34.0 39.0 14-15 38.54695189521212 40.0 38.0 41.0 34.0 41.0 16-17 38.568166692428086 40.0 38.0 41.0 34.0 41.0 18-19 38.5675370673949 40.0 38.0 41.0 34.0 41.0 20-21 38.53904531589457 40.0 38.0 41.0 34.0 41.0 22-23 38.441247890284686 40.0 38.0 41.0 34.0 41.0 24-25 38.3570499234568 40.0 38.0 41.0 34.0 41.0 26-27 38.20144046747387 40.0 38.0 41.0 33.5 41.0 28-29 38.07494351318755 40.0 37.5 41.0 33.0 41.0 30-31 37.92636262615649 40.0 37.0 41.0 33.0 41.0 32-33 38.10661612007051 40.0 37.5 41.0 33.0 41.0 34-35 38.09072340910285 40.0 37.5 41.0 33.0 41.0 36-37 38.010341844616434 40.0 37.0 41.0 33.0 41.0 38-39 37.908341654236494 40.0 37.0 41.0 33.0 41.0 40-41 37.85686519812895 40.0 37.0 41.0 33.0 41.0 42-43 37.74795993711645 40.0 37.0 41.0 33.0 41.0 44-45 37.79064567423303 40.0 37.0 41.0 33.0 41.0 46-47 37.930471181666476 40.0 37.0 41.0 33.0 41.0 48-49 37.85848381766843 40.0 37.0 41.0 33.0 41.0 50-51 37.7446956255782 40.0 37.0 41.0 32.5 41.0 52-53 37.59466777655794 40.0 36.5 41.0 32.0 41.0 54-55 37.48866742642228 39.0 36.0 41.0 32.0 41.0 56-57 37.32731631992068 39.0 36.0 41.0 32.0 41.0 58-59 37.18202929429967 39.0 35.5 40.5 31.0 41.0 60-61 36.953717540089656 39.0 35.0 40.0 31.0 41.0 62-63 36.69234454960804 38.0 35.0 40.0 31.0 41.0 64-65 36.4690364599645 38.0 35.0 40.0 31.0 41.0 66-67 36.17590148225896 37.5 34.5 40.0 30.0 41.0 68-69 35.85333932949453 37.0 34.0 39.5 30.0 41.0 70-71 35.54784958155061 36.5 34.0 39.0 30.0 41.0 72-73 35.23342460158324 36.0 34.0 39.0 29.0 40.0 74-75 34.83557623866672 35.5 34.0 38.5 29.0 40.0 76-77 33.76230102383505 35.0 32.0 37.0 28.0 39.0 78-79 34.090453456026594 35.0 33.0 37.0 29.0 39.0 80-81 33.95276653317441 35.0 33.0 36.5 29.0 39.0 82-83 33.70699037163929 35.0 33.0 36.0 29.0 38.5 84-85 33.46501566517664 35.0 33.0 36.0 29.0 37.0 86-87 33.23389468191928 35.0 32.5 35.0 29.0 37.0 88-89 32.98629979195941 34.0 32.0 35.0 28.0 36.0 90-91 32.824672247719256 34.0 32.0 35.0 28.0 36.0 92-93 32.7157326244532 34.0 32.0 35.0 27.5 36.0 94-95 32.64637613710926 34.0 32.0 35.0 28.0 35.5 96-97 32.56741213437071 34.0 32.0 35.0 27.5 35.0 98-99 32.683993909156925 34.0 32.0 35.0 29.0 35.0 100-101 31.791928307718734 33.0 30.5 34.5 26.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 1.0 14 0.0 15 1.0 16 1.0 17 2.0 18 6.0 19 17.0 20 103.0 21 567.0 22 2810.0 23 9917.0 24 26365.0 25 56649.0 26 104068.0 27 168414.0 28 247222.0 29 338757.0 30 443587.0 31 567065.0 32 723362.0 33 935590.0 34 1261867.0 35 1749755.0 36 2654920.0 37 4204544.0 38 4661253.0 39 2234733.0 40 91249.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.400541019095705 22.11980417155328 14.986940766864883 24.49271404248613 2 13.906184753998483 22.86709333498417 41.25113749114674 21.975584419870607 3 16.723346671011118 28.05623110795356 31.712279350515406 23.50814287051992 4 11.926882488555982 19.608559473984798 39.99071609218174 28.473841945277478 5 12.382319705298478 38.60265668418996 36.5645736579513 12.450449952560257 6 28.35243535242647 40.00275645557893 19.262810707858378 12.381997484136221 7 24.85604281362347 33.19005883270209 24.995501109075477 16.958397244598963 8 23.389560600671018 37.75947713464929 22.0503459825319 16.800616282147786 9 25.212282719191194 16.429041578539994 21.871469298230625 36.48720640403819 10-11 23.366424144793303 27.259619839567062 30.250369260569805 19.123586755069834 12-13 24.252278469777558 24.905672195819072 30.023852665642913 20.818196668760454 14-15 21.54390463503425 26.200012634975273 27.349853970345695 24.90622875964479 16-17 21.18819764411428 29.173680904951958 28.033180406664375 21.60494104426938 18-19 21.300832707361767 28.580746133370464 29.397259440665074 20.721161718602694 20-21 22.118864395230258 27.860618459435187 29.04012545278028 20.98039169255427 22-23 21.776489040955926 27.781507839171404 28.9668079874502 21.47519513242247 24-25 21.57516206119669 27.91745318381327 29.013147066537275 21.494237688452763 26-27 21.584329598881652 28.039913421135935 28.903183416359056 21.472573563623353 28-29 21.55110809058417 28.085444199977704 28.91788101633438 21.445566693103746 30-31 21.796975534222756 27.949762327891893 28.832142844210583 21.421119293674764 32-33 21.59293588172125 28.14207114172208 28.78373906578687 21.481253910769794 34-35 21.679863565879266 28.11517029905371 28.81913916191734 21.385826973149683 36-37 21.71542926460156 28.062874678774346 28.783923171381865 21.43777288524223 38-39 21.534732985235298 28.138780985182304 28.874435064507686 21.452050965074708 40-41 21.73451832610893 28.015206516866463 28.750221451632292 21.500053705392315 42-43 21.63831607076334 28.139738406872805 28.567229405368867 21.654716116994987 44-45 21.68610920588043 28.19545291106305 28.458006868629145 21.660431014427378 46-47 21.739870137354572 28.150646650892064 28.276468735483668 21.8330144762697 48-49 21.69979998748326 28.222124105518105 28.266552803580602 21.811523103418036 50-51 21.686204922558986 28.333718612012614 28.15810258166537 21.821973883763025 52-53 21.80208447304993 28.222546683676992 28.077742038625903 21.897626804647174 54-55 21.78314969870011 28.12670599486293 28.120490808945558 21.969653497491397 56-57 21.817063919079093 28.19178507041986 28.119573096507704 21.871577913993338 58-59 21.76327961748421 28.218863498777974 28.10106736588297 21.91678951785485 60-61 21.853071499195938 28.18538146450567 28.052413607912374 21.909133428386017 62-63 21.774606303115977 28.282116277883784 28.03331612385307 21.909961295147166 64-65 21.754655218323073 28.241813096561184 28.02810238916945 21.97542929594629 66-67 21.86063071556764 28.33278010813323 27.835719902961742 21.97086927333739 68-69 21.812717364123234 28.33091965015477 27.862044742628534 21.994318243093463 70-71 21.85804096933658 28.070247374023694 27.926185582445385 22.14552607419434 72-73 21.86664778193451 28.106622746808224 27.882284470700842 22.144445000556427 74-75 21.76185469877239 28.217757609972438 27.872564099081593 22.14782359217358 76-77 21.94646015056599 28.19264198727672 27.77441327899891 22.086484583158388 78-79 21.910978625715575 28.180990040579257 27.738936347464527 22.16909498624064 80-81 21.86865677006814 28.193911526284115 27.759347975885472 22.178083727762264 82-83 21.914160017121194 28.116025529346857 27.846795184336536 22.123019269195414 84-85 21.98175638381877 28.132980388433598 27.860977570655514 22.024285657092115 86-87 21.834459872658115 28.124006912332355 27.93796889869702 22.10356431631251 88-89 21.90089237678955 28.170295876301925 27.883612640158752 22.045199106749777 90-91 21.935403159622382 28.113648793849226 27.985797819767654 21.965150226760734 92-93 21.962741936361084 28.02839851129036 27.97277472553834 22.036084826810214 94-95 21.757592778960998 28.054168430862326 28.082083502660655 22.106155287516017 96-97 21.68886203262794 28.10010390871365 28.20685071893631 22.004183339722097 98-99 21.801310845592102 28.691086433902875 28.317914129159 21.189688591346023 100-101 21.44661439905533 31.81866112625919 25.847460793212225 20.887263681473257 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 3482.0 1 3285.0 2 4977.5 3 7268.5 4 9754.5 5 15021.0 6 19262.0 7 22296.5 8 24283.0 9 24164.5 10 22798.0 11 21611.5 12 24016.5 13 31262.5 14 47572.0 15 69800.5 16 87177.5 17 96034.5 18 98282.5 19 96370.5 20 92835.5 21 91589.0 22 96374.5 23 111182.0 24 137543.0 25 174274.5 26 220715.0 27 271232.0 28 323290.5 29 374362.5 30 418815.0 31 464437.5 32 513528.0 33 562794.0 34 612181.0 35 656552.5 36 702730.0 37 744460.5 38 772581.0 39 794408.0 40 818925.5 41 842691.5 42 857455.0 43 869607.5 44 878287.0 45 880246.0 46 875074.0 47 865264.5 48 849764.5 49 828017.0 50 802439.0 51 766594.0 52 720580.0 53 671236.5 54 620029.0 55 568280.5 56 517217.5 57 464274.0 58 409485.5 59 352768.5 60 295779.0 61 240524.0 62 190015.0 63 146734.5 64 109907.0 65 82725.0 66 62855.5 67 47946.0 68 36507.5 69 26363.0 70 19077.0 71 13913.5 72 9791.0 73 6876.5 74 4820.5 75 3391.5 76 2351.5 77 1615.5 78 1118.0 79 802.5 80 585.0 81 420.0 82 301.5 83 212.0 84 153.5 85 115.0 86 92.5 87 79.0 88 59.0 89 40.0 90 26.5 91 18.0 92 15.0 93 10.0 94 4.5 95 1.5 96 1.0 97 1.0 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.001215652566691725 3 0.0 4 3.5151399518796873E-4 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0033100901213533717 18-19 0.0 20-21 0.002209245798636986 22-23 0.0 24-25 2.783835604837369E-4 26-27 0.003534773141459887 28-29 0.0 30-31 2.0307122473650226E-4 32-33 0.0010031287561377562 34-35 7.676943962147549E-4 36-37 0.010033991196050515 38-39 0.011647785990681423 40-41 0.024968465209714664 42-43 0.002017726307158577 44-45 0.0013728189753182203 46-47 0.001799783474187018 48-49 0.0016414274186328794 50-51 6.05218276181519E-5 52-53 1.035702552494252E-4 54-55 0.006129083535390395 56-57 0.0036216927440264925 58-59 0.003770995529976668 60-61 0.001613346397019022 62-63 4.273026986343825E-4 64-65 7.73520572739475E-4 66-67 6.16859190038181E-4 68-69 1.4456364648729711E-5 70-71 0.0 72-73 1.39439857631312E-4 74-75 3.03485713710508E-4 76-77 0.001433645542371394 78-79 0.0018511247711778393 80-81 0.011020449477172031 82-83 0.009563483701554472 84-85 0.01268974662988683 86-87 0.006134616678984484 88-89 0.08737705783496551 90-91 3.8341572926044946E-4 92-93 5.196215686183492E-5 94-95 2.65958437079287E-4 96-97 0.014422472318196308 98-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 450.0 20-21 1607.0 22-23 3457.0 24-25 7114.0 26-27 8468.0 28-29 14813.0 30-31 47071.0 32-33 60371.0 34-35 84556.0 36-37 135511.0 38-39 149091.0 40-41 154055.0 42-43 172992.0 44-45 199981.0 46-47 203691.0 48-49 192142.0 50-51 179551.0 52-53 159578.0 54-55 176469.0 56-57 185149.0 58-59 197612.0 60-61 199211.0 62-63 189859.0 64-65 198973.0 66-67 213094.0 68-69 220332.0 70-71 221348.0 72-73 213479.0 74-75 213567.0 76-77 215076.0 78-79 233650.0 80-81 240452.0 82-83 232240.0 84-85 231407.0 86-87 250042.0 88-89 268254.0 90-91 298095.0 92-93 318799.0 94-95 404373.0 96-97 527550.0 98-99 1751149.0 100-101 1.1508147E7 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 82.99840410955895 #Duplication Level Percentage of deduplicated Percentage of total 1 88.70882958485558 73.62691285969841 2 7.566326744658433 12.559860895562483 3 1.9968344377838378 4.972022148212006 4 0.769027438309837 2.5531220038471503 5 0.3656117516587887 1.5172595955689923 6 0.19469610874821575 0.9695679787465825 7 0.1169697555734159 0.6795812129175094 8 0.07760597059575881 0.515293736705707 9 0.048447850296874415 0.36189848314614576 >10 0.15232567950085021 1.9512896865782836 >50 0.002628162916539711 0.14240703102305788 >100 6.428096991033355E-4 0.08472015972586054 >500 1.0765950886202183E-5 0.005799183257375608 >1k 4.293945193734497E-5 0.06026502501033482 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 4.8821388220551205E-6 4.8821388220551205E-6 2 0.0 2.9292832932330723E-5 0.0 1.4646416466165361E-5 4.8821388220551205E-6 3 0.0 3.4174971754385843E-5 0.0 1.9528555288220482E-5 4.8821388220551205E-6 4 0.0 7.811422115288193E-5 0.0 3.4174971754385843E-5 4.8821388220551205E-6 5 0.0 8.299635997493706E-5 0.0 3.9057110576440964E-5 4.8821388220551205E-6 6 0.0 8.299635997493706E-5 0.0 3.9057110576440964E-5 9.764277644110241E-6 7 4.8821388220551205E-6 8.299635997493706E-5 0.0 3.9057110576440964E-5 9.764277644110241E-6 8 9.764277644110241E-6 1.0740705408521265E-4 0.0 4.8821388220551205E-5 9.764277644110241E-6 9 9.764277644110241E-6 1.5622844230576386E-4 0.0 6.834994350877169E-5 9.764277644110241E-6 10-11 9.764277644110241E-6 1.5622844230576386E-4 2.4410694110275602E-6 1.1228919290726778E-4 9.764277644110241E-6 12-13 1.4646416466165361E-5 1.5622844230576386E-4 4.8821388220551205E-6 1.3181774819548826E-4 9.764277644110241E-6 14-15 1.4646416466165361E-5 2.2457838581453556E-4 9.764277644110241E-6 1.3914095642857094E-4 9.764277644110241E-6 16-17 1.4646416466165361E-5 2.3922480228070092E-4 9.764277644110241E-6 1.733159281829568E-4 9.764277644110241E-6 18-19 1.4646416466165361E-5 2.709587046240592E-4 9.764277644110241E-6 2.2457838581453556E-4 9.764277644110241E-6 20-21 1.4646416466165361E-5 3.075747457894726E-4 9.764277644110241E-6 3.0025153755638994E-4 9.764277644110241E-6 22-23 1.9528555288220482E-5 3.9301217517543724E-4 9.764277644110241E-6 5.150656457268152E-4 9.764277644110241E-6 24-25 2.6851763521303163E-5 4.247460775187955E-4 9.764277644110241E-6 0.0012644739549122763 1.2205347055137801E-5 26-27 2.9292832932330723E-5 4.393924939849609E-4 9.764277644110241E-6 0.003393086481328309 1.4646416466165361E-5 28-29 3.4174971754385843E-5 4.393924939849609E-4 9.764277644110241E-6 0.01804926722513778 1.4646416466165361E-5 30-31 3.4174971754385843E-5 4.7844960456140185E-4 9.764277644110241E-6 0.029695609385150274 1.4646416466165361E-5 32-33 3.4174971754385843E-5 4.906549516165397E-4 9.764277644110241E-6 0.044193120617242954 2.4410694110275602E-5 34-35 3.661604116541341E-5 5.809745198245594E-4 9.764277644110241E-6 0.06361670992078924 2.4410694110275602E-5 36-37 3.9057110576440964E-5 6.688530186215515E-4 1.2205347055137801E-5 0.08927723156951096 2.4410694110275602E-5 38-39 4.3939249398496084E-5 6.88381573909772E-4 1.4646416466165361E-5 0.13068997412759353 2.4410694110275602E-5 40-41 4.638031880952365E-5 7.27438684486213E-4 1.4646416466165361E-5 0.19140425251867102 2.4410694110275602E-5 42-43 5.3703527042606325E-5 7.616136562405988E-4 1.4646416466165361E-5 0.2261162595434829 2.4410694110275602E-5 44-45 5.3703527042606325E-5 8.690207103258115E-4 1.4646416466165361E-5 0.2753208956615655 2.4410694110275602E-5 46-47 5.3703527042606325E-5 9.422527926566383E-4 1.4646416466165361E-5 0.3303181894920164 2.4410694110275602E-5 48-49 5.3703527042606325E-5 9.49576000889721E-4 1.4646416466165361E-5 0.3732004558355375 2.4410694110275602E-5 50-51 5.8585665864661446E-5 0.0010179259443984928 2.9292832932330723E-5 0.4148060428770913 2.4410694110275602E-5 52-53 6.102673527568901E-5 0.0010252491526315753 2.9292832932330723E-5 0.4565385655280184 2.9292832932330723E-5 54-55 6.83499435087717E-5 0.0010472187773308233 2.9292832932330723E-5 0.5471242103018401 3.9057110576440964E-5 56-57 7.323208233082681E-5 0.0010691884020300713 3.173390234335828E-5 0.6237933183633938 4.3939249398496084E-5 58-59 7.323208233082681E-5 0.001071629471441099 3.4174971754385843E-5 0.687580903142955 4.3939249398496084E-5 60-61 7.811422115288193E-5 0.0010960401655513746 3.4174971754385843E-5 0.7215410607891704 4.3939249398496084E-5 62-63 7.811422115288193E-5 0.0011350972761278156 3.4174971754385843E-5 0.7414772746690325 4.3939249398496084E-5 64-65 8.05552905639095E-5 0.0013059721348997449 3.4174971754385843E-5 0.7558307628058746 4.3939249398496084E-5 66-67 8.787849879699217E-5 0.0013108542737217998 3.4174971754385843E-5 0.7644184449938696 4.3939249398496084E-5 68-69 9.031956820801973E-5 0.0013499113842982409 3.4174971754385843E-5 0.772166399304471 4.3939249398496084E-5 70-71 9.520170703007485E-5 0.0013816452866415993 3.4174971754385843E-5 0.7795506342728293 4.3939249398496084E-5 72-73 9.764277644110241E-5 0.001403614911340847 3.4174971754385843E-5 0.7857729202015387 4.8821388220551205E-5 74-75 1.0008384585212998E-4 0.0014304666748621503 3.4174971754385843E-5 0.7914239958880674 4.8821388220551205E-5 76-77 1.1228919290726778E-4 0.0015110219654260598 3.4174971754385843E-5 0.796345191820699 4.8821388220551205E-5 78-79 1.1717133172932289E-4 0.0015427558677694182 3.4174971754385843E-5 0.8009563719381301 4.8821388220551205E-5 80-81 1.1717133172932289E-4 0.0015427558677694182 3.661604116541341E-5 0.803526818027942 4.8821388220551205E-5 82-83 1.1717133172932289E-4 0.0015476380065914733 3.9057110576440964E-5 0.8052477719627165 4.8821388220551205E-5 84-85 1.2693560937343315E-4 0.0015574022842355835 3.9057110576440964E-5 0.8067002082622778 4.8821388220551205E-5 86-87 1.2693560937343315E-4 0.0015964593948120244 3.9057110576440964E-5 0.806890611676338 4.8821388220551205E-5 88-89 1.2937667878446072E-4 0.001659927199498741 3.9057110576440964E-5 0.8069589616198468 4.8821388220551205E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 21910 0.0 45.695763 1 GTATCAA 36680 0.0 33.291214 1 TCAACGC 44025 0.0 26.832731 4 ATCAACG 44375 0.0 26.630533 3 CAACGCA 45075 0.0 26.19838 5 AACGCAG 46610 0.0 25.398506 6 TATCAAC 47885 0.0 24.97624 2 ACGCAGA 54585 0.0 21.687723 7 CGCAGAG 55260 0.0 21.445549 8 GTACATG 54225 0.0 20.232819 1 TACATGG 54285 0.0 19.701141 2 ACATGGG 54410 0.0 18.808746 3 AGAGTAC 59495 0.0 17.621319 10-11 GCAGAGT 67445 0.0 17.37232 9 GAGTACT 36335 0.0 16.989077 12-13 CATGGGG 37050 0.0 16.462215 4 CAGAGTA 65505 0.0 16.369125 10-11 AGTACTT 41220 0.0 14.929959 12-13 GTACTTT 42430 0.0 14.638414 14-15 TATACTG 12085 0.0 14.073254 5 >>END_MODULE