##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138782_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 41809191 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.417591361669736 31.0 31.0 34.0 30.0 34.0 2 31.552923016376948 31.0 31.0 34.0 30.0 34.0 3 31.589663765558154 31.0 31.0 34.0 30.0 34.0 4 35.40931624340686 37.0 35.0 37.0 33.0 37.0 5 35.233696605131634 37.0 35.0 37.0 32.0 37.0 6 35.24886128507007 37.0 35.0 37.0 32.0 37.0 7 35.15177545530599 37.0 35.0 37.0 32.0 37.0 8 35.147253172155374 37.0 35.0 37.0 32.0 37.0 9 36.67201496436513 39.0 35.0 39.0 32.0 39.0 10-11 36.554366263628495 38.5 35.0 39.0 32.0 39.0 12-13 36.4965694385237 38.0 35.0 39.0 32.0 39.0 14-15 37.55419377763134 39.0 36.0 41.0 32.0 41.0 16-17 37.53309940869222 39.0 36.0 41.0 32.0 41.0 18-19 37.54062707168862 39.0 36.0 41.0 32.0 41.0 20-21 37.52173325447262 39.0 36.0 41.0 32.0 41.0 22-23 37.430398017723974 39.0 36.0 41.0 32.0 41.0 24-25 37.31946938942988 39.0 36.0 41.0 31.0 41.0 26-27 37.10546973596104 39.0 36.0 41.0 31.0 41.0 28-29 36.9260978738841 39.0 36.0 40.0 30.5 41.0 30-31 36.76440258658461 39.0 35.5 40.0 30.0 41.0 32-33 36.5872973783048 38.0 35.0 40.0 30.0 41.0 34-35 36.45139082209863 38.0 35.0 40.0 30.0 41.0 36-37 36.29476507601814 38.0 35.0 40.0 30.0 41.0 38-39 36.134769376891626 38.0 35.0 40.0 29.5 41.0 40-41 35.9364257607572 38.0 34.0 40.0 29.0 41.0 42-43 35.74188497893291 38.0 34.0 40.0 28.0 41.0 44-45 35.94763696040748 38.0 34.0 40.0 29.0 41.0 46-47 35.934427257539845 38.0 34.0 40.0 29.0 41.0 48-49 36.2797138074675 38.0 35.0 40.0 30.0 41.0 50-51 36.34454025488303 38.0 35.0 40.0 29.5 41.0 52-53 36.27762597779976 38.0 34.5 40.0 29.0 41.0 54-55 36.157574643376506 38.0 34.0 40.0 29.0 41.0 56-57 36.04155440369395 38.0 34.0 40.0 28.5 41.0 58-59 35.87766595402336 38.0 34.0 40.0 28.0 41.0 60-61 35.68368907100185 38.0 34.0 40.0 28.0 41.0 62-63 35.470439212112026 37.0 34.0 40.0 28.0 41.0 64-65 35.24927865482549 37.0 33.0 40.0 28.0 41.0 66-67 34.97879961811586 36.5 33.0 39.5 28.0 41.0 68-69 34.71180800885995 36.0 33.0 39.0 27.5 41.0 70-71 34.461168832023596 36.0 32.0 39.0 27.0 40.0 72-73 34.14511757070794 35.0 32.0 38.5 26.0 40.0 74-75 33.83087004570619 35.0 32.0 38.0 26.0 40.0 76-77 31.964727889306857 33.5 29.5 35.5 25.0 38.5 78-79 33.09453481242951 34.5 31.0 36.0 26.0 39.0 80-81 33.17699247935795 35.0 31.0 36.0 26.0 39.0 82-83 32.96159403572582 34.0 31.0 36.0 26.0 37.5 84-85 32.731238639236814 34.0 31.0 35.5 26.0 37.0 86-87 32.540177079705146 34.0 31.0 35.0 26.0 37.0 88-89 32.369930074593 34.0 31.0 35.0 26.0 36.0 90-91 32.195155496003665 34.0 31.0 35.0 26.0 36.0 92-93 32.16704122058218 34.0 31.0 35.0 26.0 36.0 94-95 32.17400521007263 34.0 31.0 35.0 26.0 35.0 96-97 32.27752198522059 34.0 31.0 35.0 26.5 35.0 98-99 32.42837178116518 34.0 31.0 35.0 27.0 35.0 100 30.95588601090913 32.0 29.0 34.0 25.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 0.0 13 1.0 14 1.0 15 0.0 16 0.0 17 0.0 18 13.0 19 115.0 20 660.0 21 4221.0 22 19162.0 23 61941.0 24 153299.0 25 306418.0 26 521714.0 27 779385.0 28 1063125.0 29 1343508.0 30 1626360.0 31 1928589.0 32 2272409.0 33 2701582.0 34 3279151.0 35 4057245.0 36 5273576.0 37 6836940.0 38 6651372.0 39 2844375.0 40 84028.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.42040160499637 21.965930888258516 14.620177654238752 23.993489852506357 2 14.427740222543372 22.81297456544178 41.14936955400437 21.609915658010472 3 17.42738263685222 28.09506586105534 31.450839456445323 23.02671204564712 4 12.283873179942658 19.60376367961772 39.83999594730259 28.272367193137033 5 12.246166159971859 38.84769977969677 36.582202702750216 12.32393135758116 6 27.95990755042273 40.26919549632761 19.38889290050228 12.382004052747376 7 24.549563755012624 33.371334546989914 25.059903694381457 17.019198003615998 8 23.208432806078452 37.940339481813936 22.113419989398984 16.737807722708624 9 25.1134957701804 16.459203209248642 21.93150256818249 36.49579845238846 10-11 23.175888300356853 27.395275007020313 30.3108531773692 19.11798351525363 12-13 24.175470803842565 25.033651739050693 30.07075702982784 20.7201204272789 14-15 21.411346190770132 26.31633556772721 27.49251280424833 24.779805437254325 16-17 21.015891915267357 29.284393814872896 28.151712754384974 21.548001515474777 18-19 21.057871300910094 28.64662533713598 29.616905325240978 20.678598036712952 20-21 21.832259733087316 27.911375809075306 29.351940570358682 20.904423887478696 22-23 21.517053574819606 27.93069655429598 29.233724782088476 21.318525088795937 24-25 21.381457911981023 28.03181600151219 29.284781133896015 21.301944952610775 26-27 21.42711703542056 28.13419696893314 29.14075506406198 21.297930931584315 28-29 21.356217644802783 28.21203017888509 29.13110767359497 21.30064450271715 30-31 21.64933244517125 28.052167262245188 29.08107251093065 21.21742778165291 32-33 21.38228327600308 28.207649803703518 29.07049921180353 21.33956770848988 34-35 21.472953039749456 28.252331562850713 29.03648315000288 21.238232247396947 36-37 21.53283102544316 28.198530694043917 28.997961774689518 21.27067650582341 38-39 21.422953656559386 28.253798971484358 29.008605952962856 21.314641418993396 40-41 21.677857226122494 28.128955533459532 28.890160737276126 21.303026503141847 42-43 21.54611762860238 28.293706944434643 28.693232119709002 21.46694330725398 44-45 21.57566406367811 28.436136857856827 28.51981954260469 21.468379535860375 46-47 21.697509708194897 28.319033273345756 28.289062954807516 21.69439406365183 48-49 21.651767411944768 28.379383057887747 28.31457331253268 21.654276217634806 50-51 21.583161309500998 28.530176329175415 28.18391643629456 21.702745925029028 52-53 21.684136282606588 28.447635296456387 28.19011525759479 21.67811316334224 54-55 21.71276937830939 28.379299032719413 28.19117056346717 21.716761025504027 56-57 21.75394291698038 28.46420983691293 28.10520696697437 21.676640279132318 58-59 21.646447937854045 28.54918777564295 28.183951076485876 21.62041321001713 60-61 21.788910865726983 28.56142832279005 28.08317463296649 21.566486178516474 62-63 21.686932905759043 28.611566527955596 28.06429999312654 21.637200573158825 64-65 21.656173270893454 28.542876428216395 28.09368886618366 21.707261434706492 66-67 21.78612068143151 28.532126593859587 27.94385393437998 21.737898790328927 68-69 21.689397382915292 28.502400935266024 28.04210325282761 21.766098428991075 70-71 21.721839222209066 28.279621625530353 28.10924437907539 21.889294773185192 72-73 21.739687902384663 28.33556493168071 28.090273894563968 21.834473271370662 74-75 21.595815909143354 28.43003741127543 28.10854213349781 21.865604546083404 76-77 21.689635942399754 28.40159977934078 28.084326871944782 21.824437406314683 78-79 21.661885770999366 28.40090414056216 28.058106318129134 21.87910377030934 80-81 21.684755497903183 28.36802091828643 28.084106054394827 21.863117529415565 82-83 21.700892258380986 28.3061015497801 28.228899276775156 21.76410691506376 84-85 21.823502678561734 28.304964169805547 28.12611021226013 21.74542293937259 86-87 21.621364410848802 28.3282705869686 28.223027327725813 21.827337674456782 88-89 21.69763737840878 28.27743478594695 28.18814381126577 21.8367840243785 90-91 21.703351209232995 28.262502954561796 28.319993194369346 21.714152641835856 92-93 21.719935268832856 28.196896268203993 28.3165082074881 21.766660255475053 94-95 21.499417773157052 28.245592498893622 28.430469421686084 21.824520306263242 96-97 21.494035618053857 28.39501247404048 28.567793958903902 21.54315794900176 98-99 22.539867489731396 30.34482308274859 28.865867486270698 18.249441941249316 100 21.92211291706866 30.999036635888494 22.6496072862001 24.429243160842745 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 7133.0 1 6907.0 2 11562.5 3 17409.0 4 23683.5 5 39405.5 6 53272.0 7 62646.5 8 67943.0 9 65538.5 10 59029.0 11 52157.0 12 54609.5 13 70075.5 14 107119.5 15 162464.5 16 208234.5 17 231631.5 18 239622.5 19 238143.5 20 230575.5 21 225335.0 22 229345.0 23 253293.0 24 303046.5 25 377149.0 26 474184.5 27 577002.5 28 676242.5 29 781413.0 30 880966.5 31 977002.5 32 1081093.5 33 1178746.0 34 1276524.0 35 1372925.5 36 1465833.5 37 1548202.5 38 1602422.0 39 1635235.5 40 1667497.0 41 1697000.5 42 1717558.5 43 1737350.5 44 1749787.0 45 1758638.0 46 1755184.5 47 1741466.0 48 1728847.5 49 1684464.5 50 1618644.0 51 1549253.5 52 1466392.5 53 1375778.0 54 1277363.5 55 1167125.0 56 1056951.5 57 946433.0 58 831971.5 59 719208.0 60 602035.5 61 489167.0 62 389126.0 63 302047.0 64 227480.0 65 170596.5 66 128316.0 67 97351.5 68 74030.0 69 53523.0 70 38249.5 71 27951.0 72 19871.0 73 13919.0 74 9707.0 75 6714.0 76 4718.5 77 3350.5 78 2413.5 79 1773.5 80 1309.0 81 946.5 82 703.0 83 493.5 84 338.5 85 246.0 86 196.5 87 161.0 88 118.5 89 80.5 90 55.0 91 36.5 92 28.0 93 20.5 94 16.5 95 14.5 96 12.5 97 11.0 98 5.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.13045935282507617 3 2.702754999492815E-4 4 0.0 5 0.0 6 5.2620008839683117E-5 7 0.0 8 0.0 9 0.002451614048212509 10-11 4.2215598000927595E-4 12-13 1.4111729643369564E-4 14-15 7.498351259654845E-4 16-17 0.0012222192962308214 18-19 5.2620008839683117E-5 20-21 0.002827324121423381 22-23 3.827860766397296E-5 24-25 8.077358163475366E-4 26-27 0.005011092955295364 28-29 0.001299098648446049 30-31 0.005927184644669121 32-33 0.00487125854663937 34-35 4.7116413288892E-5 36-37 8.015131596923889E-5 38-39 1.2228307789050539E-6 40-41 0.0 42-43 1.3669812368031166E-5 44-45 0.0 46-47 0.0 48-49 2.5382844443083854E-4 50-51 0.0 52-53 7.840901009434982E-6 54-55 3.5616138754144824E-5 56-57 0.0 58-59 0.0 60-61 0.0 62-63 3.142459385469739E-4 64-65 4.181042775760851E-6 66-67 0.0 68-69 4.28465530255158E-6 70-71 7.2355009099655365E-6 72-73 7.332582584421233E-6 74-75 3.863249353176904E-5 76-77 7.061165608136716E-4 78-79 0.004075149850595886 80-81 3.869123762482045E-5 82-83 6.287981767871104E-6 84-85 6.3874128110167035E-6 86-87 1.6234729511953997E-6 88-89 1.6540266227824735E-6 90-91 7.958409285343652E-5 92-93 5.814122099931083E-4 94-95 0.0 96-97 0.0 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 1719.0 20-21 6111.0 22-23 12141.0 24-25 24356.0 26-27 32557.0 28-29 51018.0 30-31 110188.0 32-33 138775.0 34-35 199360.0 36-37 264389.0 38-39 322808.0 40-41 325551.0 42-43 379028.0 44-45 421052.0 46-47 417887.0 48-49 390902.0 50-51 363043.0 52-53 351476.0 54-55 377675.0 56-57 409362.0 58-59 415374.0 60-61 417477.0 62-63 399640.0 64-65 414776.0 66-67 443154.0 68-69 451510.0 70-71 462607.0 72-73 444163.0 74-75 451161.0 76-77 411760.0 78-79 467303.0 80-81 500444.0 82-83 495189.0 84-85 504569.0 86-87 546322.0 88-89 678536.0 90-91 710297.0 92-93 767917.0 94-95 914239.0 96-97 1807492.0 98-99 2976479.0 100-101 2.2529384E7 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 79.76600578304439 #Duplication Level Percentage of deduplicated Percentage of total 1 87.67769770524703 69.93699742200752 2 7.80701761912511 12.454692251109261 3 2.1722337042829327 5.19811218653869 4 0.9198868794046924 2.9350280856936544 5 0.47813310517378804 1.9069384016178672 6 0.2863571572677412 1.3704939997580878 7 0.17421084066578557 0.9727272046811253 8 0.1185234410038976 0.7563313184434572 9 0.08127949916871915 0.5835006900661504 >10 0.27832960864612427 3.36433825086168 >50 0.004801640793882071 0.25369176182618464 >100 0.0014539614747614183 0.17814658531890634 >500 3.477381309128488E-5 0.01682953531582584 >1k 4.006393247781926E-5 0.07217230676173814 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 9.56727433448784E-6 0.0 4.78363716724392E-6 0.0 3 0.0 9.56727433448784E-6 0.0 2.152636725259764E-5 0.0 4 0.0 3.1093641587085484E-5 0.0 2.631000441984156E-5 2.39181858362196E-6 5 0.0 3.1093641587085484E-5 0.0 3.348546017070744E-5 4.78363716724392E-6 6 4.544455308881724E-5 3.1093641587085484E-5 0.0 3.348546017070744E-5 4.78363716724392E-6 7 4.544455308881724E-5 3.1093641587085484E-5 0.0 4.066091592157332E-5 4.78363716724392E-6 8 4.78363716724392E-5 3.58772787543294E-5 0.0 4.78363716724392E-5 7.17545575086588E-6 9 4.78363716724392E-5 7.653819467590272E-5 0.0 8.37136504267686E-5 1.19590929181098E-5 10-11 4.9032280964250184E-5 7.653819467590272E-5 0.0 1.1600320130566506E-4 1.19590929181098E-5 12-13 5.0228190256061164E-5 7.653819467590272E-5 0.0 1.5068457076818347E-4 1.19590929181098E-5 14-15 5.0228190256061164E-5 1.255704756401529E-4 0.0 1.865618495225129E-4 1.79386393771647E-5 16-17 7.893001325952468E-5 1.3035411280739684E-4 0.0 2.1645958181778737E-4 1.913454866897568E-5 18-19 7.893001325952468E-5 1.5546820793542742E-4 0.0 2.3559413048676307E-4 2.631000441984156E-5 20-21 7.893001325952468E-5 1.79386393771647E-4 0.0 2.810386835755803E-4 2.631000441984156E-5 22-23 8.490955971857957E-5 2.152636725259764E-4 0.0 3.408341481661293E-4 3.468136946251842E-5 24-25 9.088910617763448E-5 2.5592458844754973E-4 0.0 3.9345415700581244E-4 4.664046238062822E-5 26-27 9.328092476125644E-5 2.7266731853290343E-4 0.0 4.855391724752579E-4 4.9032280964250184E-5 28-29 9.56727433448784E-5 2.7386322782471445E-4 0.0 9.746660728259487E-4 5.0228190256061164E-5 30-31 9.56727433448784E-5 3.061527787036109E-4 0.0 0.0024862954176750273 5.0228190256061164E-5 32-33 9.806456192850037E-5 3.1332823445447675E-4 0.0 0.005502378651622319 5.262000883968312E-5 34-35 1.0284819909574429E-4 3.468136946251842E-4 0.0 0.010454639029011586 5.740364600692704E-5 36-37 1.0524001767936625E-4 3.779073362122697E-4 0.0 0.01731676654542299 5.740364600692704E-5 38-39 1.0524001767936625E-4 3.898664291303795E-4 0.0 0.028097888811098974 5.740364600692704E-5 40-41 1.0524001767936625E-4 4.18568252133843E-4 0.0 0.03853339329144159 5.740364600692704E-5 42-43 1.0882774555479919E-4 4.2933143576014186E-4 0.0 0.051172958596591836 5.979546459054901E-5 44-45 1.1002365484661017E-4 4.7238417026533716E-4 0.0 0.06517944822228203 6.218728317417097E-5 46-47 1.1002365484661017E-4 5.046737211442336E-4 0.0 0.07997523798056748 6.457910175779293E-5 48-49 1.1121956413842114E-4 5.058696304360446E-4 0.0 0.09300108198697268 7.414637609228076E-5 50-51 1.2796229422377487E-4 5.608814578593497E-4 0.0 0.10544451816826592 7.414637609228076E-5 52-53 1.315500220992078E-4 5.644691857347825E-4 0.0 0.11540883438763501 8.251774113495763E-5 54-55 1.315500220992078E-4 5.680569136102154E-4 0.0 0.1308001869732423 9.088910617763448E-5 56-57 1.3394184068282977E-4 5.716446414856484E-4 0.0 0.14652161052338947 9.208501546944546E-5 58-59 1.3633365926645172E-4 5.740364600692704E-4 0.0 0.15938122313823294 9.806456192850037E-5 60-61 1.494886614763725E-4 5.847996436955693E-4 0.0 0.17356351142981935 1.0045638051212233E-4 62-63 1.6025184510267134E-4 6.051301016563558E-4 0.0 0.18752575241171254 1.0524001767936625E-4 64-65 1.6025184510267134E-4 6.673173848305269E-4 0.0 0.19868836974147622 1.0524001767936625E-4 66-67 1.6503548226991525E-4 6.840601149158806E-4 0.0 0.20960702157571048 1.0882774555479919E-4 68-69 1.6503548226991525E-4 6.948232985421794E-4 0.0 0.22382877487392663 1.1361138272204311E-4 70-71 1.7699457518802506E-4 7.008028450012343E-4 0.0 0.23440539665070295 1.1719911059747604E-4 72-73 2.152636725259764E-4 7.019987542930452E-4 0.0 0.2417733937975504 1.2198274776471996E-4 74-75 2.152636725259764E-4 7.18741484378399E-4 0.0 0.24742884883852453 1.2198274776471996E-4 76-77 2.2124321898503132E-4 7.510310352572954E-4 0.0 0.25160376817623664 1.2198274776471996E-4 78-79 2.2483094686046425E-4 7.653819467590272E-4 0.0 0.2553266338016442 1.2198274776471996E-4 80-81 2.2483094686046425E-4 7.653819467590272E-4 0.0 0.2562761857793422 1.2317865705653095E-4 82-83 2.2483094686046425E-4 7.665778560508381E-4 0.0 0.25687892406241486 1.2676638493196388E-4 84-85 2.2483094686046425E-4 7.725574025098931E-4 0.0 0.25720062366191204 1.2676638493196388E-4 86-87 2.2483094686046425E-4 7.869083140116249E-4 0.0 0.25736446323489015 1.2676638493196388E-4 88 2.320064026113301E-4 8.203937741823323E-4 0.0 0.25738838142072634 1.2676638493196388E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 46840 0.0 45.56894 1 GTATCAA 80700 0.0 33.588463 1 ATCAACG 99685 0.0 26.485394 3 TCAACGC 99720 0.0 26.467999 4 CAACGCA 101010 0.0 26.109514 5 AACGCAG 103385 0.0 25.585686 6 TATCAAC 106260 0.0 25.080566 2 ACGCAGA 119000 0.0 22.106817 7 CGCAGAG 120490 0.0 21.819717 8 GTACATG 107935 0.0 19.480051 1 TACATGG 106950 0.0 19.160233 2 ACATGGG 106260 0.0 18.676748 3 GCAGAGT 144640 0.0 17.962536 9 AGAGTAC 130330 0.0 17.654127 10-11 GAGTACT 88810 0.0 17.043003 12-13 CATGGGG 73800 0.0 16.60215 4 CAGAGTA 141695 0.0 16.516743 10-11 AGTACTT 98880 0.0 15.255076 12-13 GTACTTT 103150 0.0 14.679706 14-15 TATACTG 25070 0.0 14.130872 5 >>END_MODULE