##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138768_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4938421 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.89413600015065 33.0 33.0 33.0 33.0 33.0 2 32.94974567781888 33.0 33.0 33.0 33.0 33.0 3 33.61965413641324 33.0 33.0 33.0 33.0 37.0 4 36.78393964386592 37.0 37.0 37.0 37.0 37.0 5 36.7986457614691 37.0 37.0 37.0 37.0 37.0 6 36.802761651953126 37.0 37.0 37.0 37.0 37.0 7 36.796865840316165 37.0 37.0 37.0 37.0 37.0 8 36.78389266528714 37.0 37.0 37.0 37.0 37.0 9 36.78524998172493 37.0 37.0 37.0 37.0 37.0 10-11 36.777752747285014 37.0 37.0 37.0 37.0 37.0 12-13 37.02997607939866 37.0 37.0 37.0 37.0 38.5 14-15 39.09081647757451 40.0 40.0 40.0 37.0 40.0 16-17 39.047667462940076 40.0 40.0 40.0 37.0 40.0 18-19 39.08680527642338 40.0 40.0 40.0 37.0 40.0 20-21 39.130894255699076 40.0 40.0 40.0 37.0 40.0 22-23 39.148348837161635 40.0 40.0 40.0 37.0 40.0 24-25 39.037436131895404 40.0 40.0 40.0 37.0 40.0 26-27 38.96969888426018 40.0 40.0 40.0 37.0 40.0 28-29 38.944508346861454 40.0 40.0 40.0 37.0 40.0 30-31 38.87342353361636 40.0 40.0 40.0 37.0 40.0 32-33 38.743322517304584 40.0 37.0 40.0 37.0 40.0 34-35 38.76156498464113 40.0 37.0 40.0 37.0 40.0 36-37 38.51590243520627 40.0 37.0 40.0 37.0 40.0 38-39 38.666634793835236 40.0 37.0 40.0 37.0 40.0 40-41 38.67788042895201 40.0 37.0 40.0 37.0 40.0 42-43 38.62544067272435 40.0 37.0 40.0 37.0 40.0 44-45 38.536889111103434 40.0 37.0 40.0 37.0 40.0 46-47 38.45909069151838 40.0 37.0 40.0 37.0 40.0 48-49 38.405749462535105 40.0 37.0 40.0 37.0 40.0 50-51 38.33568445990586 40.0 37.0 40.0 37.0 40.0 52-53 38.290408127293446 40.0 37.0 40.0 37.0 40.0 54-55 38.206575398930056 40.0 37.0 40.0 37.0 40.0 56-57 38.07791590277575 40.0 37.0 40.0 37.0 40.0 58-59 37.958139488821175 40.0 37.0 40.0 35.0 40.0 60-61 37.79583434190418 40.0 37.0 40.0 33.0 40.0 62-63 37.61010476384753 38.5 37.0 40.0 33.0 40.0 64-65 37.39280524120632 37.0 37.0 40.0 33.0 40.0 66-67 37.15591354956362 37.0 37.0 40.0 33.0 40.0 68-69 36.9009764161624 37.0 37.0 40.0 33.0 40.0 70-71 36.64881643586663 37.0 37.0 40.0 33.0 40.0 72-73 36.392750670405164 37.0 37.0 37.0 33.0 40.0 74-75 35.94222478181923 37.0 35.0 37.0 33.0 40.0 76-77 34.68830588870316 37.0 33.0 37.0 30.0 37.0 78-79 35.80146620161155 37.0 37.0 37.0 33.0 37.0 80-81 35.88979854967567 37.0 37.0 37.0 33.0 37.0 82-83 35.80832606201047 37.0 37.0 37.0 33.0 37.0 84-85 35.69717671286192 37.0 37.0 37.0 33.0 37.0 86-87 35.618504626780634 37.0 37.0 37.0 33.0 37.0 88-89 35.54545001395643 37.0 37.0 37.0 33.0 37.0 90-91 35.47267219797995 37.0 33.0 37.0 33.0 37.0 92-93 35.40998802762084 37.0 33.0 37.0 33.0 37.0 94-95 35.36638032030346 37.0 33.0 37.0 33.0 37.0 96-97 35.32312145696484 37.0 33.0 37.0 33.0 37.0 98-99 35.27041127960698 37.0 33.0 37.0 33.0 37.0 100 35.17356530377879 37.0 33.0 37.0 33.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 1.0 19 9.0 20 30.0 21 65.0 22 325.0 23 903.0 24 2233.0 25 4508.0 26 7998.0 27 12976.0 28 19474.0 29 27926.0 30 38293.0 31 51878.0 32 70165.0 33 96919.0 34 139067.0 35 216036.0 36 437028.0 37 1389185.0 38 2306212.0 39 117188.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.85890244497575 0.0 24.43635232614202 29.704745228882235 2 15.052016973959923 23.909947942526994 38.47370842469243 22.56432665882065 3 16.72158209906081 24.339582102705865 33.005737516855845 25.933098281377482 4 13.048139843898255 23.46390823053027 36.91156792961549 26.576383995955993 5 17.49211433440568 35.83215666803216 32.15306361930435 14.522665378257818 6 27.946503548401402 37.16554339939831 20.14682425819913 14.74112879400116 7 26.16913381827916 32.767275208006765 22.213496986182427 18.85009398753164 8 24.234790836990204 32.0120945541095 21.898092527955797 21.855022080944497 9 23.842013469487515 20.427966752935806 23.479772178192178 32.2502475993845 10-11 24.66999067110722 26.0221232657159 28.20814588306667 21.099740180110203 12-13 25.205192104925843 24.13201507121406 28.163313739351096 22.499479084508998 14-15 22.6350487331882 26.35370698447945 26.420934950665405 24.590309331666944 16-17 21.625738267353068 28.89661493015683 27.254966719119327 22.222680083370776 18-19 21.69161964927656 27.595642412827903 29.360123407866606 21.35261453002893 20-21 22.4200916894385 26.961714865265897 29.321868930414418 21.29632451488118 22-23 22.363979993610673 26.740699150300557 29.09983905174696 21.795481804341808 24-25 22.094792216915078 27.03990454229377 29.284467307204352 21.5808359335868 26-27 21.978044591835214 27.440144491973395 29.08223328373864 21.49957763245275 28-29 21.860992643582442 26.968836986380868 29.330625658707195 21.839544711329502 30-31 22.03598425124079 27.23306057272111 29.112566741648667 21.61838843438943 32-33 22.0461684950682 27.26222980891305 29.081187538656856 21.610414157361895 34-35 22.120611005257594 26.989199678074783 29.096633042368737 21.79355627429889 36-37 21.97284511045111 27.32583103237517 29.006037263748674 21.695286593425045 38-39 21.821626351903 27.23463119383248 29.212096312478636 21.73164614178588 40-41 22.13597769020584 26.96341696469445 28.89957093523613 22.001034409863582 42-43 22.099943192896852 27.003091302698074 28.866845755115012 22.030119749290066 44-45 22.0455238662599 27.445268716010712 28.539495000942782 21.969712416786606 46-47 22.3760495775155 27.15830944212983 28.036744354339938 22.428896626014737 48-49 22.239646296994923 27.357579076199833 28.120421494081565 22.282353132723674 50-51 22.222272611883675 27.71531079425372 27.80555867791493 22.25685791594767 52-53 22.381506056061678 27.54199992887313 27.866094853013706 22.210399162051488 54-55 22.23124426086769 27.588439748163506 27.88142652710908 22.298889463859723 56-57 22.405614859333 28.00312992261031 27.352112206156864 22.239143011899827 58-59 22.295189027563712 27.845020021107697 27.742691153378512 22.11709979795008 60-61 22.426650465037802 28.046011366553646 27.475918237548846 22.051419930859705 62-63 22.262635719104917 28.244651360035817 27.399776071914744 22.09293684894452 64-65 22.365392769844096 27.914108814093613 27.397634762922213 22.32286365314008 66-67 22.360020645867866 27.91168480271726 27.384912236561686 22.343382314853187 68-69 22.429012664824107 27.833613456178448 27.46799910500897 22.269374773988478 70-71 22.457951525787063 27.496371948478952 27.490131534710034 22.55554499102395 72-73 22.412974827631647 27.55318894399899 27.50987142947441 22.52396479889496 74-75 22.313594002321764 27.742396433906425 27.456391232632697 22.487618331139114 76-77 22.551057437686328 27.527269709161473 27.32794108470588 22.593731768446318 78-79 22.371862076589686 27.621063429169396 27.447435651757807 22.559638842483114 80-81 22.445354995546595 27.715120785380375 27.338421364891346 22.50110285418168 82-83 22.57399225086635 27.4810824836148 27.41611550350657 22.52880976201228 84-85 22.588586453657552 27.522898324496246 27.46198649430744 22.426528727538763 86-87 22.46185622638484 27.55627868975549 27.465375036428913 22.51649004743076 88-89 22.591980627629113 27.368541272973534 27.408977547449926 22.63050055194743 90-91 22.623657486630982 27.410414854994436 27.46713486154216 22.498792796832422 92-93 22.581846747336314 27.445286663164786 27.488120571392745 22.48474601810615 94-95 22.582928918679887 27.357940537898408 27.48047290553075 22.57865763789096 96-97 22.66355755353923 27.62643822970449 27.603437740909996 22.106566475846282 98-99 23.700771625240943 29.71849498678956 27.11920843537382 19.46152495259568 100 22.8373780911419 29.95112303976016 21.50916889944372 25.702329969654226 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 889.0 1 842.0 2 1269.5 3 1851.0 4 2640.0 5 4551.5 6 6143.0 7 7297.0 8 8179.0 9 8329.0 10 7815.0 11 7218.0 12 7845.0 13 10135.0 14 16037.5 15 24875.0 16 32947.0 17 38060.5 18 38865.0 19 35869.0 20 31151.0 21 26270.5 22 22889.5 23 22458.5 24 24854.0 25 30078.5 26 37531.5 27 45959.0 28 54874.5 29 65286.5 30 75685.0 31 85685.0 32 96413.5 33 107603.0 34 119244.5 35 129579.0 36 140276.0 37 151123.5 38 159309.0 39 165728.5 40 173372.5 41 180166.5 42 184279.0 43 188938.5 44 194505.0 45 200998.5 46 207581.0 47 212914.0 48 213808.0 49 210143.0 50 206049.0 51 199331.5 52 188823.5 53 177930.5 54 167149.0 55 155384.5 56 143284.5 57 129902.0 58 115367.5 59 100640.0 60 84997.0 61 69893.0 62 55920.5 63 43165.0 64 32411.5 65 23927.5 66 17880.0 67 13662.5 68 10301.5 69 7324.5 70 5048.0 71 3468.5 72 2303.5 73 1467.0 74 926.5 75 609.0 76 399.0 77 268.5 78 189.5 79 128.0 80 89.0 81 61.5 82 40.5 83 26.0 84 19.0 85 14.5 86 12.0 87 10.5 88 7.5 89 3.5 90 0.5 91 0.0 92 0.0 93 0.5 94 1.0 95 1.0 96 1.0 97 1.0 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 1.6199509924326013E-4 2 6.68229784378448E-4 3 0.004495364004000468 4 0.015065544229623192 5 6.074816221622255E-4 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 3.037481304302572E-5 22-23 5.16408840271303E-4 24-25 0.012487760374361383 26-27 0.05513637031863898 28-29 0.08327721540455138 30-31 0.06961174730458726 32-33 0.03174957658756527 34-35 0.003630297072512125 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 1.0875667412519937E-5 54-55 3.506055889817811E-4 56-57 6.738810977677744E-4 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 1.15624246635768E-5 68-69 3.505185571534528E-5 70-71 0.0012622227695786381 72-73 0.015496197897158805 74-75 0.02455433875165742 76-77 0.0030169187348714852 78-79 7.337413016497317E-5 80-81 9.015412032117097E-4 82-83 0.015603112690020283 84-85 0.04782201394533756 86-87 0.03646015411475611 88-89 0.009040754124924446 90-91 1.1710930514104646E-4 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 63.0 20-21 287.0 22-23 664.0 24-25 1886.0 26-27 2305.0 28-29 4503.0 30-31 9258.0 32-33 12378.0 34-35 17671.0 36-37 24069.0 38-39 28216.0 40-41 30572.0 42-43 38122.0 44-45 46247.0 46-47 44212.0 48-49 38791.0 50-51 33609.0 52-53 33201.0 54-55 36250.0 56-57 39475.0 58-59 40064.0 60-61 39265.0 62-63 39780.0 64-65 41283.0 66-67 46355.0 68-69 41525.0 70-71 38245.0 72-73 36582.0 74-75 37526.0 76-77 37629.0 78-79 39528.0 80-81 40414.0 82-83 38774.0 84-85 39249.0 86-87 41580.0 88-89 44572.0 90-91 46338.0 92-93 48680.0 94-95 62422.0 96-97 228642.0 98-99 867168.0 100-101 2601021.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 88.3548761125663 #Duplication Level Percentage of deduplicated Percentage of total 1 91.59920390877706 80.93236313369697 2 6.324788439978815 11.176517981050395 3 1.2574600117127306 3.3330817065415346 4 0.38724948389867037 1.3686152069808906 5 0.17016377891914014 0.7517399802623376 6 0.08633511972881718 0.4576877284681933 7 0.047956962660083265 0.2966062046196637 8 0.030609794979938793 0.21636197146268368 9 0.02045723467973249 0.16267467921601134 >10 0.07333104765198788 1.013117698323534 >50 0.0014703417826591179 0.08832363308823972 >100 9.406497953613167E-4 0.18682282831158986 >500 3.3225434998281456E-5 0.01608724797796487 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 2.0249387405407516E-5 7 0.0 0.0 0.0 0.0 2.0249387405407516E-5 8 0.0 4.049877481081503E-5 0.0 0.0 2.0249387405407516E-5 9 0.0 1.0124693702703759E-4 0.0 0.0 2.0249387405407516E-5 10-11 0.0 1.0124693702703759E-4 0.0 0.0 2.0249387405407516E-5 12-13 0.0 1.0124693702703759E-4 0.0 0.0 2.0249387405407516E-5 14-15 0.0 1.8224448664866765E-4 0.0 0.0 2.0249387405407516E-5 16-17 0.0 2.0249387405407517E-4 0.0 0.0 2.0249387405407516E-5 18-19 0.0 2.0249387405407517E-4 0.0 0.0 2.0249387405407516E-5 20-21 0.0 2.0249387405407517E-4 0.0 2.0249387405407516E-5 2.0249387405407516E-5 22-23 0.0 2.6324203627029776E-4 0.0 7.08728559189263E-5 3.0374081108111273E-5 24-25 0.0 3.239901984865203E-4 0.0 9.112224332433383E-5 4.049877481081503E-5 26-27 0.0 3.644889732973353E-4 0.0 2.0249387405407517E-4 4.049877481081503E-5 28-29 0.0 3.644889732973353E-4 0.0 5.973569284595218E-4 4.049877481081503E-5 30-31 0.0 4.657359103243729E-4 0.0 0.0013769583435677113 4.049877481081503E-5 32-33 0.0 4.7586060402707666E-4 0.0 0.00285516362416246 4.049877481081503E-5 34-35 0.0 5.771075410541143E-4 0.0 0.00530533950021677 4.049877481081503E-5 36-37 0.0 6.68229784378448E-4 0.0 0.008535116791379268 4.049877481081503E-5 38-39 0.0 6.68229784378448E-4 0.0 0.01378983282308252 6.074816221622255E-5 40-41 0.0 7.492273340000781E-4 0.0 0.019267292116245255 6.074816221622255E-5 42-43 0.0 8.302248836217082E-4 0.0 0.024765000796813395 6.074816221622255E-5 44-45 0.0 9.112224332433383E-4 0.0 0.031123308442111353 1.0124693702703759E-4 46-47 0.0 9.112224332433383E-4 0.0 0.03781573097959854 1.0124693702703759E-4 48-49 0.0 9.314718206487458E-4 0.0 0.044447405354869504 1.1137163072974135E-4 50-51 0.0 0.0011339656947028211 0.0 0.05096770809941072 1.214963244324451E-4 52-53 0.0 0.0011542150821082285 0.0 0.057336140438411384 1.214963244324451E-4 54-55 0.0 0.0011542150821082285 0.0 0.06360332584038501 1.4174571183785264E-4 56-57 0.0 0.0011643397758109323 0.0 0.06909090982725045 1.4174571183785264E-4 58-59 0.0 0.0011947138569190436 0.0 0.07450762095819696 1.4174571183785264E-4 60-61 0.0 0.0012250879380271548 0.0 0.0797623369899002 1.4174571183785264E-4 62-63 0.0 0.0012352126317298586 0.0 0.08490568139087373 1.4174571183785264E-4 64-65 0.0 0.0013769583435677111 0.0 0.08932004784525256 1.4174571183785264E-4 66-67 0.0 0.0014174571183785262 0.0 0.0942912724532801 1.4174571183785264E-4 68-69 0.0 0.00142758181208123 0.0 0.09944474154795632 1.4174571183785264E-4 70-71 0.0 0.0014377065057839338 0.0 0.10427422044414601 2.0249387405407517E-4 72-73 0.0 0.0014377065057839338 0.0 0.10819247690709237 2.0249387405407517E-4 74-75 0.0 0.0014579558931893414 0.0 0.11128050848641702 2.0249387405407517E-4 76-77 0.0 0.00150857936170286 0.0 0.11458115863349844 2.0249387405407517E-4 78-79 2.0249387405407516E-5 0.0015389534428109713 0.0 0.11630235656295808 2.0249387405407517E-4 80-81 2.0249387405407516E-5 0.001549078136513675 0.0 0.11685921471660679 2.0249387405407517E-4 82-83 2.0249387405407516E-5 0.001559202830216379 0.0 0.11732495062693116 2.0249387405407517E-4 84-85 2.0249387405407516E-5 0.0015693275239190827 0.0 0.11745657164506632 2.0249387405407517E-4 86-87 2.0249387405407516E-5 0.0015794522176217863 0.0 0.11751731980728253 2.0249387405407517E-4 88 2.0249387405407516E-5 0.001640200379838009 0.0 0.11752744450098523 2.0249387405407517E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 7900 0.0 53.521427 1 GTATCAA 14480 0.0 38.91407 1 CTTATAC 4125 0.0 37.704124 1 ATCAACG 17590 0.0 31.47791 3 TCAACGC 18230 0.0 30.370049 4 TATCAAC 18840 0.0 29.682924 2 CAACGCA 18635 0.0 29.6611 5 AACGCAG 18890 0.0 29.2604 6 ACGCAGA 19210 0.0 28.817217 7 TATACAC 6180 0.0 27.779228 3 GTGGTAT 3565 0.0 26.70055 1 TTATACA 6165 0.0 26.123888 2 TGGTATC 3485 0.0 25.85025 2 CGCAGAG 22080 0.0 25.09074 8 ACACATC 6795 0.0 22.883717 6 GCAGAGT 25075 0.0 22.04303 9 ACATCTC 7395 0.0 21.141928 8 GAGTACT 15330 0.0 20.743624 12-13 TACACAT 8200 0.0 20.154642 5 CAGAGTA 24560 0.0 19.616413 10-11 >>END_MODULE