##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138767_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6925952 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.772517626457706 33.0 33.0 33.0 33.0 33.0 2 32.78919851018315 33.0 33.0 33.0 33.0 33.0 3 33.54749527573971 33.0 33.0 33.0 33.0 37.0 4 36.704141322377055 37.0 37.0 37.0 37.0 37.0 5 36.709060357334266 37.0 37.0 37.0 37.0 37.0 6 36.687739100704135 37.0 37.0 37.0 37.0 37.0 7 36.68533423275241 37.0 37.0 37.0 37.0 37.0 8 36.66243470933671 37.0 37.0 37.0 37.0 37.0 9 36.678346601304774 37.0 37.0 37.0 37.0 37.0 10-11 36.693022128943426 37.0 37.0 37.0 37.0 37.0 12-13 36.949864581793236 37.0 37.0 37.0 37.0 38.5 14-15 38.903228899074094 40.0 38.5 40.0 37.0 40.0 16-17 38.82358945023009 40.0 37.0 40.0 37.0 40.0 18-19 38.86496506184276 40.0 37.0 40.0 37.0 40.0 20-21 38.88195255953164 40.0 37.0 40.0 37.0 40.0 22-23 38.884657146663216 40.0 37.0 40.0 37.0 40.0 24-25 38.86750117085218 40.0 37.0 40.0 37.0 40.0 26-27 38.775690978861476 40.0 37.0 40.0 37.0 40.0 28-29 38.6521771606901 40.0 37.0 40.0 37.0 40.0 30-31 38.50979500909425 40.0 37.0 40.0 37.0 40.0 32-33 38.39221852751385 40.0 37.0 40.0 37.0 40.0 34-35 38.35482123464028 40.0 37.0 40.0 37.0 40.0 36-37 38.3408356189801 40.0 37.0 40.0 37.0 40.0 38-39 38.23369958001899 40.0 37.0 40.0 37.0 40.0 40-41 38.25206526506123 40.0 37.0 40.0 37.0 40.0 42-43 38.233153023241144 40.0 37.0 40.0 37.0 40.0 44-45 38.0983401049123 40.0 37.0 40.0 37.0 40.0 46-47 37.81728727245407 40.0 37.0 40.0 33.0 40.0 48-49 37.96588331761813 40.0 37.0 40.0 33.0 40.0 50-51 37.89550118762703 40.0 37.0 40.0 33.0 40.0 52-53 37.840526563913016 40.0 37.0 40.0 33.0 40.0 54-55 37.722725059972944 40.0 37.0 40.0 33.0 40.0 56-57 37.51913264519883 40.0 37.0 40.0 33.0 40.0 58-59 37.34736077754637 38.5 37.0 40.0 33.0 40.0 60-61 37.149822476607454 37.0 37.0 40.0 33.0 40.0 62-63 36.98869504466565 37.0 37.0 40.0 33.0 40.0 64-65 36.83211710635851 37.0 37.0 40.0 33.0 40.0 66-67 36.63714729203347 37.0 37.0 40.0 33.0 40.0 68-69 36.44826757453808 37.0 37.0 40.0 33.0 40.0 70-71 36.231455726052246 37.0 37.0 38.5 33.0 40.0 72-73 35.94192644322777 37.0 37.0 37.0 33.0 40.0 74-75 35.35654253046669 37.0 33.0 37.0 33.0 40.0 76-77 33.745480681409134 35.0 33.0 37.0 30.0 37.0 78-79 35.221862698377194 37.0 33.0 37.0 33.0 37.0 80-81 35.37861770908761 37.0 33.0 37.0 33.0 37.0 82-83 35.21617719601969 37.0 33.0 37.0 33.0 37.0 84-85 35.075660717584924 37.0 33.0 37.0 33.0 37.0 86-87 34.98602952323402 37.0 33.0 37.0 33.0 37.0 88-89 34.80645941133736 37.0 33.0 37.0 33.0 37.0 90-91 34.768969592659445 37.0 33.0 37.0 33.0 37.0 92-93 34.805510217177826 37.0 33.0 37.0 33.0 37.0 94-95 34.798011706166776 37.0 33.0 37.0 33.0 37.0 96-97 34.791118592556714 37.0 33.0 37.0 33.0 37.0 98-99 34.786227952382134 37.0 33.0 37.0 33.0 37.0 100 34.71908287143184 37.0 33.0 37.0 33.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 2.0 18 5.0 19 16.0 20 35.0 21 143.0 22 595.0 23 1731.0 24 4184.0 25 8835.0 26 15449.0 27 25712.0 28 37954.0 29 53935.0 30 72425.0 31 97214.0 32 132514.0 33 184106.0 34 264906.0 35 417380.0 36 839224.0 37 2235061.0 38 2432487.0 39 102038.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.66647742662809 0.026292429570652278 24.92219115708059 30.385038986720662 2 14.791820707373695 24.01924709306145 39.16245748404293 22.026474715521918 3 16.03278741071082 24.39962396499773 33.733981080720895 25.83360754357055 4 12.424012240340712 24.39470045341066 36.70667031863206 26.47461698761657 5 16.731998248327198 35.46900635017487 32.858924355658885 14.940071045839048 6 26.900497404688167 38.211725467264415 19.666298486128255 15.221478641919159 7 25.038395449231448 32.80000103956843 23.02130061272452 19.140302898475603 8 23.845865410174234 32.11679211521544 21.7940737923637 22.24326868224663 9 23.292260689523733 20.39287085940681 23.710601015890983 32.60426743517847 10-11 24.1552654189108 26.047503512440294 28.325324923739203 21.471906144909703 12-13 24.76934469714992 24.176666825742192 28.294431906517303 22.759556570590583 14-15 22.31608737686891 26.05985429873034 26.45266672365041 25.171391600750336 16-17 21.25761916917703 28.971576759411562 27.42470637971502 22.34609769169639 18-19 21.053011918072777 27.349965752000593 29.672592302112406 21.924430027814225 20-21 21.886252270623608 26.90714153855239 29.729605827466465 21.477000363357533 22-23 21.71121761406068 26.971561103522152 29.57858088770819 21.738640394708977 24-25 21.83823325499005 27.320262542435948 29.81546863842149 21.02603556415252 26-27 21.86681443549226 27.888485591094568 29.6357965645193 20.608903408893873 28-29 21.031696601787857 27.14905825877296 29.84785686085679 21.97138827858239 30-31 21.900990695533306 27.49805947243575 29.803795084634082 20.797154747396863 32-33 21.55645980285318 27.7226364087253 29.875193688188318 20.845710100233205 34-35 21.494868268062326 27.251922578163473 30.172529352282762 21.080679801491435 36-37 21.69122740710614 27.078003170706484 29.97031954664211 21.26044987554527 38-39 21.054830755343605 27.033525961868115 30.291792705454696 21.619850577333583 40-41 21.308591727252015 26.824580636952476 30.005370569280345 21.861457066515165 42-43 21.923580886515012 26.592349880192938 29.867011818470235 21.617057414821815 44-45 21.296942315950123 27.61995798512874 29.51358577459479 21.569513924326344 46-47 21.845927774538424 26.802300796821033 28.57434555753546 22.777425871105088 48-49 21.77921246619858 26.898592536792936 29.062318178642354 22.259876818366127 50-51 21.45300214739484 27.452227435359823 28.53061798531703 22.564152431928306 52-53 21.683242338737355 27.634692408583362 28.83898718036718 21.843078072312103 54-55 21.62292516738855 27.967234236861245 28.445436088297647 21.96440450745256 56-57 22.16865274758114 28.73156620877119 27.06075561281487 22.039025430832798 58-59 21.524727233582276 28.63275373821177 28.480893540161915 21.36162548804404 60-61 21.985508455544352 29.26460548053859 27.273919062057267 21.475967001859793 62-63 21.471915524304446 29.66592805145295 27.217034329649703 21.6451220945929 64-65 21.652359298764644 29.14240726318898 27.331121090549104 21.87411234749727 66-67 21.779910890039513 28.881469830959418 27.365773277621187 21.972846001379885 68-69 21.930469014197982 28.405309647623984 27.592898050379798 22.071323287798233 70-71 22.186712017767327 27.585456747586214 27.72130212297385 22.50652911167261 72-73 22.097585610359204 27.838528706728184 27.676410199552077 22.38747548336054 74-75 22.042934256792172 27.959015604104486 27.661239568575812 22.33681057052753 76-77 22.235812404135448 27.71670884021723 27.44366801581517 22.60381073983215 78-79 22.175217486808865 27.78582055614977 27.504433158372432 22.53452879866893 80-81 22.308043660881204 27.798973044822173 27.3812734225953 22.51170987170133 82-83 22.52286148556051 27.284639684161277 27.62252547317207 22.56997335710614 84-85 22.48138352379036 27.441804070543736 27.60745096214941 22.46936144351649 86-87 22.248498287833772 27.679145263603 27.480147285192295 22.59220916337093 88-89 22.544773859336058 27.439786217032548 27.404530605210457 22.610909318420934 90-91 22.576802484022704 27.38725414142571 27.567988784849028 22.467954589702558 92-93 22.511798901043484 27.53675136430201 27.494737091908323 22.456712642746187 94-95 22.635518013996776 27.169980611724 27.574916449355356 22.61958492492387 96-97 22.65457667408326 27.492952517473686 27.75053432988973 22.101936478553327 98-99 23.683999716189337 29.693267049811062 27.134027296177027 19.488705937822576 100 22.962288305505176 29.66540987341691 21.496750968625797 25.875550852452122 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1529.0 1 1566.0 2 3008.0 3 4701.0 4 6984.0 5 12679.0 6 16960.5 7 18787.5 8 19249.0 9 17758.0 10 15467.5 11 13249.5 12 14298.0 13 19182.5 14 31277.5 15 50248.0 16 67297.5 17 77311.5 18 78221.5 19 71603.0 20 61462.0 21 50272.0 22 42121.0 23 39126.5 24 40955.5 25 48731.0 26 60494.5 27 73585.0 28 85503.5 29 97850.5 30 110231.0 31 121149.5 32 135053.0 33 150869.5 34 165885.0 35 182239.0 36 204252.0 37 220528.5 38 222280.5 39 224893.0 40 237113.0 41 246984.5 42 249086.0 43 254555.5 44 264121.5 45 274859.5 46 294349.0 47 312963.0 48 332127.0 49 333942.5 50 315994.5 51 300644.5 52 284143.0 53 260232.0 54 228437.5 55 201950.5 56 180108.0 57 157170.5 58 134917.0 59 115327.5 60 94681.5 61 73982.5 62 56206.5 63 41446.5 64 29525.5 65 21262.0 66 16014.5 67 12280.0 68 9052.5 69 6549.5 70 4910.0 71 3601.0 72 2661.5 73 2024.0 74 1486.0 75 1002.5 76 673.0 77 434.0 78 287.5 79 214.5 80 162.0 81 117.0 82 93.0 83 68.5 84 45.0 85 30.0 86 21.5 87 16.0 88 11.5 89 9.5 90 8.5 91 7.0 92 4.5 93 3.0 94 1.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 5.775379326914192E-5 2 3.32084311297566E-4 3 1.443844831728548E-5 4 1.443844831728548E-5 5 1.443844831728548E-5 6 2.887689663457096E-5 7 1.443844831728548E-5 8 7.21922415864274E-5 9 1.7326137980742574E-4 10-11 0.003053731819105879 12-13 0.007515212349147092 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 3.6207236899751E-5 32-33 6.098948911500984E-4 34-35 0.01084656452733418 36-37 0.062274557361677016 38-39 0.1652372970567157 40-41 0.16756752365626576 42-43 0.049315641433670204 44-45 0.00411937591904213 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 3.144003783494153E-5 58-59 7.150095763615927E-5 60-61 0.0015110871194773182 62-63 0.024476105923990906 64-65 0.11746368231561734 66-67 0.23135553593857136 68-69 0.23447687168944342 70-71 0.09802783675517647 72-73 0.00660646586627218 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86-87 0.0 88-89 0.0 90-91 0.0 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 175.0 20-21 567.0 22-23 1327.0 24-25 2344.0 26-27 3840.0 28-29 8832.0 30-31 17446.0 32-33 21029.0 34-35 27420.0 36-37 30430.0 38-39 32584.0 40-41 40426.0 42-43 49007.0 44-45 61575.0 46-47 60480.0 48-49 48391.0 50-51 41543.0 52-53 41691.0 54-55 58024.0 56-57 66347.0 58-59 72407.0 60-61 76673.0 62-63 82019.0 64-65 91282.0 66-67 104298.0 68-69 90747.0 70-71 66447.0 72-73 59459.0 74-75 59984.0 76-77 56276.0 78-79 58813.0 80-81 60682.0 82-83 63908.0 84-85 68951.0 86-87 70992.0 88-89 76623.0 90-91 76382.0 92-93 82545.0 94-95 100617.0 96-97 316336.0 98-99 1158014.0 100-101 3419019.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 74.48912554864606 #Duplication Level Percentage of deduplicated Percentage of total 1 85.59469707071699 63.758741363989635 2 8.539415435210103 12.721871769308226 3 2.733187917604693 6.107783338274952 4 1.2555824886813238 3.7410896654425834 5 0.6284453098051421 2.3406170791266496 6 0.3746078148316826 1.6742525130300692 7 0.2410708491454717 1.2570009723681026 8 0.1510618855950369 0.9001974209363127 9 0.10448149312565116 0.7004461553051965 >10 0.3554036836472538 4.106368354566492 >50 0.010668149386646357 0.5452920839868459 >100 0.010411542427955103 1.5199330462428602 >500 7.120546058278952E-4 0.3810568486795869 >1k 2.5430521635693283E-4 0.24534938874246656 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.443844831728548E-5 2 0.0 0.0 0.0 0.0 1.443844831728548E-5 3 0.0 0.0 0.0 0.0 1.443844831728548E-5 4 0.0 0.0 0.0 0.0 1.443844831728548E-5 5 0.0 0.0 0.0 0.0 1.443844831728548E-5 6 0.0 0.0 0.0 0.0 1.443844831728548E-5 7 0.0 0.0 0.0 0.0 1.443844831728548E-5 8 0.0 0.0 0.0 0.0 1.443844831728548E-5 9 0.0 0.0 0.0 0.0 1.443844831728548E-5 10-11 0.0 0.0 0.0 1.443844831728548E-5 1.443844831728548E-5 12-13 0.0 0.0 0.0 1.443844831728548E-5 4.331534495185644E-5 14-15 0.0 0.0 0.0 5.775379326914192E-5 6.497301742778466E-5 16-17 0.0 0.0 0.0 1.1550758653828383E-4 1.4438448317285479E-4 18-19 0.0 0.0 0.0 5.919763810087046E-4 1.4438448317285479E-4 20-21 0.0 0.0 0.0 0.0012489257794451938 1.66042155648783E-4 22-23 0.0 0.0 0.0 0.0020863557818477517 1.7326137980742576E-4 24-25 0.0 0.0 0.0 0.0038334080282392945 1.7326137980742576E-4 26-27 0.0 0.0 0.0 0.008056654161045299 1.8048060396606852E-4 28-29 0.0 0.0 0.0 0.024343223862943318 1.9491905228335397E-4 30-31 0.0 0.0 0.0 0.031129294572067492 2.0213827644199672E-4 32-33 0.0 0.0 0.0 0.03330228104381895 2.0935750060063947E-4 34-35 0.0 0.0 0.0 0.036132216914006914 2.4545362139385317E-4 36-37 0.0 0.0 0.0 0.039936748045611634 2.4545362139385317E-4 38-39 0.0 0.0 0.0 0.04966826221146205 2.4545362139385317E-4 40-41 0.0 0.0 0.0 0.05863453861649633 2.4545362139385317E-4 42-43 0.0 0.0 0.0 0.0641861219944926 2.4545362139385317E-4 44-45 0.0 0.0 0.0 0.07074839675469885 2.5267284555249587E-4 46-47 0.0 0.0 0.0 0.07773660574026503 2.598920697111386E-4 48-49 0.0 0.0 0.0 0.0855694639523924 3.03207414662995E-4 50-51 0.0 0.0 0.0 0.09435525975346061 3.32084311297566E-4 52-53 0.0 0.0 0.0 0.11859019525402428 3.60961207932137E-4 54-55 0.0 0.0 0.0 0.1505857967251289 3.60961207932137E-4 56-57 0.0 0.0 0.0 0.18439342346005286 3.6818043209077973E-4 58-59 0.0 0.0 0.0 0.20784146352732447 3.753996562494225E-4 60-61 0.0 0.0 0.0 0.22433739072982314 3.826188804080652E-4 62-63 0.0 0.0 0.0 0.23980096887763588 4.187150012012789E-4 64-65 0.0 0.0 0.0 0.24607447467149643 4.403726736772071E-4 66-67 0.0 0.0 0.0 0.2527883531390342 4.4759189783584983E-4 68-69 0.0 0.0 0.0 0.2601447425566911 4.4759189783584983E-4 70-71 0.0 0.0 0.0 0.26524151481269287 4.6203034615313534E-4 72-73 0.0 0.0 0.0 0.26911823818588404 4.7646879447042084E-4 74-75 0.0 0.0 0.0 0.272150312332514 4.836880186290636E-4 76-77 0.0 0.0 0.0 0.2750524404442884 4.909072427877063E-4 78-79 0.0 0.0 0.0 0.27651794294849286 4.909072427877063E-4 80-81 0.0 0.0 0.0 0.27704494631207377 4.98126466946349E-4 82-83 0.0 7.21922415864274E-6 0.0 0.277485318985751 5.342225877395627E-4 84-85 0.0 1.443844831728548E-5 0.0 0.27781740329704857 5.342225877395627E-4 86-87 0.0 1.443844831728548E-5 0.0 0.2780339800218078 5.703187085327765E-4 88 0.0 1.443844831728548E-5 0.0 0.2780845145909183 6.064148293259901E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 11790 0.0 54.217525 1 GGTATCA 14080 0.0 46.292583 1 TATACAC 14950 0.0 43.935085 3 TTATACA 15580 0.0 41.136158 2 GTATCAA 25610 0.0 36.040546 1 ATACACA 19470 0.0 34.68398 4 ACACATC 20035 0.0 32.225502 6 ATCAACG 30315 0.0 30.059769 3 TACACAT 22345 0.0 29.435202 5 ACGCAGA 31640 0.0 28.794348 7 AACGCAG 31760 0.0 28.644917 6 TATCAAC 32030 0.0 28.554953 2 TCAACGC 31970 0.0 28.504684 4 CAACGCA 32105 0.0 28.347292 5 ACATCTC 24155 0.0 26.834064 8 CACATCT 25270 0.0 25.50073 7 CGCAGAG 36460 0.0 25.022242 8 CGCTACG 220 1.9970491E-4 23.215939 94 CATCTCC 28070 0.0 23.016762 9 GCAGAGT 41125 0.0 22.153269 9 >>END_MODULE