##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138766_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 8365806 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.66080303559514 33.0 33.0 33.0 33.0 33.0 2 32.60453995705853 33.0 33.0 33.0 33.0 33.0 3 32.67792678912229 33.0 33.0 33.0 33.0 33.0 4 36.64371669627529 37.0 37.0 37.0 37.0 37.0 5 36.64693156881716 37.0 37.0 37.0 37.0 37.0 6 36.636847543440524 37.0 37.0 37.0 37.0 37.0 7 36.61819255670046 37.0 37.0 37.0 37.0 37.0 8 36.615785854943326 37.0 37.0 37.0 37.0 37.0 9 36.61958704277866 37.0 37.0 37.0 37.0 37.0 10-11 36.620743835082955 37.0 37.0 37.0 37.0 37.0 12-13 36.618949626611 37.0 37.0 37.0 37.0 37.0 14-15 38.763729998042024 40.0 37.0 40.0 37.0 40.0 16-17 38.681961965171084 40.0 37.0 40.0 37.0 40.0 18-19 38.73746265452486 40.0 37.0 40.0 37.0 40.0 20-21 38.76504295032714 40.0 37.0 40.0 37.0 40.0 22-23 38.76749346558718 40.0 37.0 40.0 37.0 40.0 24-25 38.76146981434212 40.0 37.0 40.0 37.0 40.0 26-27 38.66924485742166 40.0 37.0 40.0 37.0 40.0 28-29 38.55805649130815 40.0 37.0 40.0 37.0 40.0 30-31 38.406876521888385 40.0 37.0 40.0 37.0 40.0 32-33 38.27730931425295 40.0 37.0 40.0 37.0 40.0 34-35 38.2230652474094 40.0 37.0 40.0 37.0 40.0 36-37 38.20039516107789 40.0 37.0 40.0 37.0 40.0 38-39 38.13915188486332 40.0 37.0 40.0 37.0 40.0 40-41 38.13775744854451 40.0 37.0 40.0 37.0 40.0 42-43 38.11916363056492 40.0 37.0 40.0 37.0 40.0 44-45 38.01537812681882 40.0 37.0 40.0 33.0 40.0 46-47 37.65019021167252 40.0 37.0 40.0 33.0 40.0 48-49 37.84474433585466 40.0 37.0 40.0 33.0 40.0 50-51 37.82573660274885 40.0 37.0 40.0 33.0 40.0 52-53 37.81272389734437 40.0 37.0 40.0 33.0 40.0 54-55 37.70094624153843 40.0 37.0 40.0 33.0 40.0 56-57 37.484835564704454 40.0 37.0 40.0 33.0 40.0 58-59 37.31544658933796 38.5 37.0 40.0 33.0 40.0 60-61 37.12446210769511 37.0 37.0 40.0 33.0 40.0 62-63 37.00085954399952 37.0 37.0 40.0 33.0 40.0 64-65 36.8627672949784 37.0 37.0 40.0 33.0 40.0 66-67 36.67399266462537 37.0 37.0 40.0 33.0 40.0 68-69 36.49821060705981 37.0 37.0 40.0 33.0 40.0 70-71 36.29734219866603 37.0 37.0 40.0 33.0 40.0 72-73 36.03271703527332 37.0 37.0 37.0 33.0 40.0 74-75 35.70803308795472 37.0 35.0 37.0 33.0 40.0 76-77 33.537488637656594 35.0 33.0 37.0 27.0 37.0 78-79 35.21290188087008 37.0 33.0 37.0 33.0 37.0 80-81 35.424103112695306 37.0 33.0 37.0 33.0 37.0 82-83 35.25611157945022 37.0 33.0 37.0 33.0 37.0 84-85 35.10679690636705 37.0 33.0 37.0 33.0 37.0 86-87 35.01206240710597 37.0 33.0 37.0 33.0 37.0 88-89 34.84113163775505 37.0 33.0 37.0 33.0 37.0 90-91 34.79074287132017 37.0 33.0 37.0 33.0 37.0 92-93 34.84438628362207 37.0 33.0 37.0 33.0 37.0 94-95 34.83386249854911 37.0 33.0 37.0 33.0 37.0 96-97 34.8420499148044 37.0 33.0 37.0 33.0 37.0 98-99 34.8524631323009 37.0 33.0 37.0 33.0 37.0 100 34.7011803309796 37.0 33.0 37.0 33.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 3.0 17 1.0 18 7.0 19 13.0 20 62.0 21 265.0 22 950.0 23 2725.0 24 6038.0 25 12178.0 26 21268.0 27 33977.0 28 50421.0 29 70597.0 30 95113.0 31 127246.0 32 169235.0 33 231837.0 34 328199.0 35 499823.0 36 957668.0 37 2576753.0 38 3059323.0 39 122104.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.64897520322312 21.01051841394821 14.816506002709842 23.524000380118828 2 14.183277942822361 20.69926042521217 43.39421687444035 21.723244757525116 3 16.988225641378726 27.646899772717653 32.3026376657551 23.062236920148518 4 11.536796334985535 18.963456718934193 38.57368913407746 30.92605781200281 5 12.135244350633997 38.16571887992622 36.05902407968819 13.64001268975159 6 27.625479242526062 38.809051990925916 18.864900763895314 14.700568002652703 7 24.236266057329082 34.20788146414105 23.0881399831648 18.46771249536506 8 23.72696665449808 36.398812021220664 21.895905786005557 17.97831553827569 9 24.639849406022563 16.534330344260912 21.584734334025914 37.24108591569061 10-11 23.217478716442546 27.020305542717043 29.046634212208787 20.71558152863162 12-13 24.74521088026319 24.590645249792143 29.070334863309327 21.593809006635343 14-15 21.962014180104106 25.985697014728764 27.18579656281774 24.86649224234939 16-17 20.691855632320426 29.55640496564228 27.758227957951693 21.993511444085602 18-19 20.44418672869058 27.263822517519532 30.683271880796664 21.60871887299323 20-21 21.272235987193497 26.322014020307606 30.879851225943128 21.52589876655577 22-23 20.73135564780222 27.079330950903298 30.8272884879994 21.36202491329508 24-25 20.529702923824434 27.55713482868266 31.220350635546286 20.692811611946617 26-27 20.387081097484703 27.48841928964066 31.275637745892503 20.848861866982134 28-29 19.53940502176511 26.804816383851858 31.503770242156033 22.152008352227 30-31 19.967274189990903 26.792593413941233 31.7416956652072 21.49843673086066 32-33 19.843145808003335 27.450339145827286 31.545249367678903 21.16126567849048 34-35 19.983883012697806 28.217606345704834 31.59545574376813 20.20305489782923 36-37 20.39941312936266 27.539941129813876 30.60804691058488 21.452598830238585 38-39 20.534155818347067 27.16790605595949 31.00701950757142 21.290918618122017 40-41 20.607599012356772 27.169473662535264 31.15713623398933 21.065791091118633 42-43 21.128418215523183 27.145586886097483 30.87419475121065 20.851800147168685 44-45 20.587904841870724 28.045209771010988 30.136937074974167 21.229948312144124 46-47 21.57599684385184 27.243880317516016 28.960547691590705 22.21957514704144 48-49 21.39007226020325 27.363777621140866 29.122424818865845 22.12372529979004 50-51 20.756412366286586 27.95119313506524 29.270462980066835 22.021931518581336 52-53 20.921959039432924 28.366915945385458 29.487817222761898 21.223307792419718 54-55 20.98304449213187 28.461173527966267 28.608360051482617 21.947421928419246 56-57 21.761503722928683 28.83074341779493 27.767392580224108 21.640360279052278 58-59 20.75915564282461 29.422037355969 29.003052265173174 20.81575473603322 60-61 21.552264220539225 29.994674136339512 27.473926420856614 20.97913522226465 62-63 20.895072015096588 30.390005492229317 27.446389152612387 21.268533340061705 64-65 20.914342781470335 30.05980321963072 27.638059409548294 21.387794589350655 66-67 21.27516746734612 29.532802697934773 27.563523914498983 21.628505920220118 68-69 21.386152667320474 28.967016512216 27.921410508624607 21.72542031183892 70-71 21.599878420434997 28.206237335791958 27.981570147180012 22.212314096593033 72-73 21.673157952957432 28.13466237784268 28.11212944699503 22.080050222204857 74-75 21.55043343487649 28.27226301308572 28.087830250322277 22.089473301715515 76-77 21.62406615018512 28.23994128198313 27.852699551930005 22.283293015901755 78-79 21.812495551321913 28.307619800136802 27.76592622583455 22.113958422706737 80-81 21.659293276668283 28.17866533954391 27.90286030100762 22.259181082780184 82-83 22.07455934254107 27.83052863091431 28.04118944038536 22.053722586159257 84-85 22.288762689044926 27.865246044471327 27.726039215405706 22.119952051078045 86-87 21.761536077963186 28.02122156963985 28.002517939610243 22.214724412786722 88-89 22.022358367034315 27.719136655971464 27.962471004889057 22.296033972105164 90-91 22.11844095690589 27.669010000730836 28.030627995656104 22.18192104670717 92-93 22.171414045602596 27.67695327266779 27.96623659337208 22.185396088357532 94-95 21.804455173927355 27.70068559487402 28.172538991121144 22.32232024007748 96-97 21.975248688605 27.808710896372457 28.215563579616283 22.00047683540626 98-99 23.098507158787104 29.728049868129002 28.351564794950406 18.821878178133485 100 29.70316142288943 40.73509847429071 29.56174010281986 0.0 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2760.0 1 2698.5 2 4777.5 3 7240.0 4 10510.0 5 19312.5 6 26170.0 7 29018.0 8 29223.0 9 26330.0 10 22691.0 11 19468.5 12 21361.5 13 30101.5 14 50166.5 15 78365.0 16 101270.0 17 113855.0 18 115772.5 19 108076.5 20 94578.5 21 79075.0 22 67385.5 23 64663.5 24 70097.0 25 82199.5 26 100330.0 27 117683.5 28 131318.5 29 147545.5 30 162784.5 31 174228.0 32 190286.0 33 210711.5 34 230228.5 35 249938.0 36 271935.5 37 289475.5 38 296857.0 39 299395.5 40 309369.5 41 323209.0 42 332066.5 43 340562.5 44 359576.0 45 394534.0 46 420564.5 47 434329.5 48 429454.5 49 409186.5 50 392932.5 51 366371.0 52 330621.0 53 297267.5 54 266643.5 55 236330.0 56 203254.0 57 167358.0 58 137977.5 59 112298.0 60 86102.0 61 64179.0 62 47362.0 63 34733.5 64 24510.0 65 16723.5 66 11893.0 67 8909.5 68 6567.5 69 4600.5 70 3312.0 71 2306.0 72 1656.5 73 1186.5 74 799.5 75 518.5 76 329.0 77 226.0 78 150.5 79 97.0 80 75.0 81 65.5 82 60.5 83 47.5 84 32.0 85 19.0 86 13.0 87 11.0 88 6.5 89 2.0 90 0.5 91 0.0 92 0.5 93 1.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 1.195342086584365E-5 2 6.335313058897134E-4 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0016077351064559709 12-13 0.008977019070248582 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 5.97779404933318E-6 24-25 5.97927630666321E-6 26-27 1.1964005809960502E-5 28-29 5.986744151100634E-6 30-31 6.0001114820713366E-6 32-33 0.0 34-35 0.006063341383261992 36-37 0.04814410309171046 38-39 0.1542583396280625 40-41 0.18252499869980912 42-43 0.05701253916379885 44-45 0.005047337363004503 46-47 0.0 48-49 0.0 50-51 0.0 52-53 1.3592941294329386E-5 54-55 2.7510206630537512E-5 56-57 6.981123461028787E-6 58-59 0.0 60-61 0.0 62-63 0.015319857578859682 64-65 0.10749380361673352 66-67 0.23810761378856635 68-69 0.26593520872491494 70-71 0.121139618888352 72-73 0.00819749645891414 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86-87 0.0 88-89 0.0 90-91 0.0 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 218.0 20-21 882.0 22-23 1899.0 24-25 3169.0 26-27 5711.0 28-29 12974.0 30-31 32638.0 32-33 41090.0 34-35 55024.0 36-37 74532.0 38-39 87168.0 40-41 95611.0 42-43 115232.0 44-45 137586.0 46-47 127123.0 48-49 107580.0 50-51 90015.0 52-53 83140.0 54-55 102405.0 56-57 114320.0 58-59 115705.0 60-61 115639.0 62-63 117613.0 64-65 129139.0 66-67 139128.0 68-69 114515.0 70-71 91911.0 72-73 82824.0 74-75 81424.0 76-77 76942.0 78-79 82254.0 80-81 87060.0 82-83 90431.0 84-85 92493.0 86-87 92544.0 88-89 97226.0 90-91 99403.0 92-93 103636.0 94-95 108900.0 96-97 236316.0 98-99 1570699.0 100-101 3351687.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 78.07678086238704 #Duplication Level Percentage of deduplicated Percentage of total 1 87.16210826996809 68.05336826897951 2 7.757600904898906 12.113770117392948 3 2.344993840850022 5.492687107070834 4 1.0733539411601953 3.3521608180697617 5 0.5674543481650816 2.2152504395546875 6 0.33030201194610925 1.5473350683073153 7 0.20054004375325432 1.0960264735179444 8 0.14604188533616455 0.912198422249726 9 0.09180231214005966 0.6450866106857903 >10 0.3200106726320193 3.6354378211952816 >50 0.003812469200277914 0.19280699764966494 >100 0.0013424246842226753 0.19739225496721902 >500 3.016777862333884E-4 0.15671281028599618 >1k 3.351974793120036E-4 0.3897667900732628 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 2.39068417316873E-5 0.0 6 0.0 0.0 0.0 2.39068417316873E-5 0.0 7 0.0 0.0 0.0 2.39068417316873E-5 0.0 8 0.0 0.0 0.0 2.39068417316873E-5 0.0 9 0.0 0.0 0.0 3.586026259753095E-5 0.0 10-11 0.0 0.0 0.0 3.586026259753095E-5 0.0 12-13 0.0 0.0 0.0 3.586026259753095E-5 0.0 14-15 0.0 0.0 0.0 5.3790393896296424E-5 0.0 16-17 0.0 0.0 0.0 9.56273669267492E-5 0.0 18-19 0.0 0.0 0.0 1.6137118168888927E-4 0.0 20-21 0.0 0.0 0.0 3.167656529448567E-4 0.0 22-23 0.0 0.0 0.0 0.0010519010361942412 0.0 24-25 0.0 0.0 0.0 0.0037055604684115315 0.0 26-27 0.0 0.0 0.0 0.008905298545053519 0.0 28-29 0.0 0.0 0.0 0.03459319998575152 0.0 30-31 0.0 0.0 0.0 0.04902695568125773 0.0 32-33 0.0 0.0 0.0 0.055810522022624 0.0 34-35 0.0 0.0 0.0 0.06407631255135489 0.0 36-37 0.0 0.0 0.0 0.07654970722486273 0.0 38-39 0.0 0.0 0.0 0.10785571647250726 0.0 40-41 0.0 0.0 0.0 0.14091290187699787 0.0 42-43 0.0 0.0 0.0 0.1612098105072004 0.0 44-45 0.0 0.0 0.0 0.1863239477463379 0.0 46-47 0.0 0.0 0.0 0.2108344372317503 0.0 48-49 0.0 0.0 0.0 0.23367742450637752 0.0 50-51 0.0 0.0 0.0 0.2558749270542492 0.0 52-53 0.0 0.0 0.0 0.30273233684835626 0.0 54-55 5.976710432921825E-6 0.0 0.0 0.3564390567985918 0.0 56-57 1.195342086584365E-5 0.0 0.0 0.4139350111632998 0.0 58-59 1.195342086584365E-5 0.0 0.0 0.4592205461135484 0.0 60-61 1.195342086584365E-5 0.0 0.0 0.4780352305563863 0.0 62-63 1.195342086584365E-5 0.0 0.0 0.5019002353150432 0.0 64-65 1.195342086584365E-5 0.0 0.0 0.5108832310957248 0.0 66-67 1.195342086584365E-5 0.0 0.0 0.5180373534839321 0.0 68-69 1.195342086584365E-5 0.0 0.0 0.5247850595627008 0.0 70-71 1.195342086584365E-5 0.0 0.0 0.5307438398643238 0.0 72-73 1.195342086584365E-5 0.0 0.0 0.5356387657088868 0.0 74-75 1.195342086584365E-5 0.0 0.0 0.5393861631503288 0.0 76-77 1.195342086584365E-5 0.0 0.0 0.5428705853327223 0.0 78-79 1.195342086584365E-5 0.0 0.0 0.5450879449033362 0.0 80-81 1.195342086584365E-5 0.0 0.0 0.545799173444854 0.0 82-83 1.195342086584365E-5 0.0 0.0 0.5464028211985791 0.0 84-85 1.195342086584365E-5 0.0 0.0 0.5466538430367618 0.0 86-87 1.195342086584365E-5 0.0 0.0 0.5468331443497494 0.0 88 1.195342086584365E-5 0.0 0.0 0.5468570511914811 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 18140 0.0 43.67431 1 GGTATCA 21340 0.0 42.087677 1 TATACAC 20870 0.0 39.010464 3 TTATACA 23070 0.0 34.772644 2 GTATCAA 37340 0.0 33.457146 1 TACACAT 28620 0.0 28.586792 5 ATACACA 30590 0.0 26.953232 4 TATCAAC 47520 0.0 26.138966 2 ACACATC 30900 0.0 26.004482 6 ATCAACG 47900 0.0 25.923288 3 CAACGCA 48350 0.0 25.666317 5 TCAACGC 48430 0.0 25.647816 4 AACGCAG 48665 0.0 25.520205 6 CACATCT 33225 0.0 24.245691 7 ACGCAGA 53430 0.0 23.200516 7 CGCAGAG 53600 0.0 23.156649 8 CATCTCC 36065 0.0 22.12664 9 GCAGAGT 59050 0.0 20.898033 9 TACATGG 35165 0.0 18.918036 2 GAGTACT 39950 0.0 18.791842 12-13 >>END_MODULE