##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138765_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7714296 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.69713970011003 33.0 33.0 33.0 33.0 33.0 2 32.63298828564525 33.0 33.0 33.0 33.0 33.0 3 32.70596448463995 33.0 33.0 33.0 33.0 33.0 4 36.67873996538375 37.0 37.0 37.0 37.0 37.0 5 36.682684849012794 37.0 37.0 37.0 37.0 37.0 6 36.67690583819962 37.0 37.0 37.0 37.0 37.0 7 36.66170808068552 37.0 37.0 37.0 37.0 37.0 8 36.65455577540711 37.0 37.0 37.0 37.0 37.0 9 36.652004408438565 37.0 37.0 37.0 37.0 37.0 10-11 36.65627349533904 37.0 37.0 37.0 37.0 37.0 12-13 36.6561537825357 37.0 37.0 37.0 37.0 37.0 14-15 38.85840768878975 40.0 37.0 40.0 37.0 40.0 16-17 38.79355076600639 40.0 37.0 40.0 37.0 40.0 18-19 38.84112646183139 40.0 37.0 40.0 37.0 40.0 20-21 38.85763901253835 40.0 37.0 40.0 37.0 40.0 22-23 38.86184829189651 40.0 37.0 40.0 37.0 40.0 24-25 38.85681449484528 40.0 37.0 40.0 37.0 40.0 26-27 38.77584675226139 40.0 37.0 40.0 37.0 40.0 28-29 38.672508291533475 40.0 37.0 40.0 37.0 40.0 30-31 38.51723285946706 40.0 37.0 40.0 37.0 40.0 32-33 38.408556409404056 40.0 37.0 40.0 37.0 40.0 34-35 38.37708108935111 40.0 37.0 40.0 37.0 40.0 36-37 38.34975352952617 40.0 37.0 40.0 37.0 40.0 38-39 38.3046046182083 40.0 37.0 40.0 37.0 40.0 40-41 38.278314672438874 40.0 37.0 40.0 37.0 40.0 42-43 38.24886889201264 40.0 37.0 40.0 37.0 40.0 44-45 38.162975385815564 40.0 37.0 40.0 37.0 40.0 46-47 37.800458286449654 40.0 37.0 40.0 33.0 40.0 48-49 37.972541371207605 40.0 37.0 40.0 33.0 40.0 50-51 37.98913819964561 40.0 37.0 40.0 33.0 40.0 52-53 37.95810585536668 40.0 37.0 40.0 33.0 40.0 54-55 37.86951040240341 40.0 37.0 40.0 33.0 40.0 56-57 37.709005052101126 40.0 37.0 40.0 33.0 40.0 58-59 37.54798256055193 40.0 37.0 40.0 33.0 40.0 60-61 37.37494931684542 38.5 37.0 40.0 33.0 40.0 62-63 37.24173200012561 37.0 37.0 40.0 33.0 40.0 64-65 37.065114059083015 37.0 37.0 40.0 33.0 40.0 66-67 36.86008186043168 37.0 37.0 40.0 33.0 40.0 68-69 36.65682069813106 37.0 37.0 40.0 33.0 40.0 70-71 36.43002524709574 37.0 37.0 40.0 33.0 40.0 72-73 36.14828848210553 37.0 37.0 37.0 33.0 40.0 74-75 35.81006297127974 37.0 37.0 37.0 33.0 40.0 76-77 33.655319010168746 35.0 33.0 37.0 30.0 37.0 78-79 35.30946484156375 37.0 33.0 37.0 33.0 37.0 80-81 35.50093291581881 37.0 33.0 37.0 33.0 37.0 82-83 35.32556579949383 37.0 33.0 37.0 33.0 37.0 84-85 35.17240628632557 37.0 33.0 37.0 33.0 37.0 86-87 35.07161332621099 37.0 33.0 37.0 33.0 37.0 88-89 34.895680050698516 37.0 33.0 37.0 33.0 37.0 90-91 34.8372772709873 37.0 33.0 37.0 33.0 37.0 92-93 34.87603896892891 37.0 33.0 37.0 33.0 37.0 94-95 34.855942051600124 37.0 33.0 37.0 33.0 37.0 96-97 34.8519408746357 37.0 33.0 37.0 33.0 37.0 98-99 34.85833021401159 37.0 33.0 37.0 33.0 37.0 100 34.809963378200045 37.0 33.0 37.0 33.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 4.0 18 5.0 19 11.0 20 44.0 21 186.0 22 617.0 23 1908.0 24 4420.0 25 9138.0 26 16347.0 27 27133.0 28 40753.0 29 58876.0 30 81511.0 31 111344.0 32 149275.0 33 205167.0 34 291529.0 35 446482.0 36 859217.0 37 2366113.0 38 2938663.0 39 105552.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.82932359072652 20.504715013454245 15.021167199487081 22.64479419633216 2 14.602994972946206 20.988727369831974 42.77313702156785 21.635140635653972 3 17.692053219646542 27.05279316551845 31.24766828954147 24.00748532529354 4 11.941416803663433 18.30636737464245 39.72399807422429 30.028217747469828 5 12.537038386143957 38.13932940590546 35.92061697415214 13.40301523379845 6 28.477680523972772 38.71610286048212 19.07077951657015 13.735437098974968 7 25.204522928475377 33.8518340109931 23.749807824280484 17.193835236251044 8 23.724669590675493 36.844416761350196 21.460833426774578 17.970080221199733 9 25.394993917785886 17.140125294647753 22.091711285125694 35.37316950244067 10-11 23.565753621147177 27.254902329344933 29.171188921366664 20.008155128141226 12-13 24.737604225997856 25.048795394982605 29.485868862687937 20.727731516331605 14-15 21.725812698916403 26.286915876704757 28.046966307748626 23.940305116630213 16-17 20.39366910473749 29.29217390673109 28.793521793822798 21.52063519470863 18-19 20.203580469300114 27.853060084808778 31.583893073327758 20.359466372563357 20-21 21.201099397838306 27.074745908143345 31.636959150204152 20.087195543814197 22-23 20.895322014429155 26.950148138856722 31.50565540059398 20.648874446120143 24-25 20.46961088824085 27.244501467416505 31.644248235624868 20.641639408717772 26-27 20.454524962969952 27.46011992967291 31.51058263092193 20.574772476435204 28-29 20.37992957842486 27.564947926492433 31.488200120983116 20.56692237409959 30-31 20.68178679871031 27.45696725483272 31.30501759632972 20.556228350127252 32-33 20.388993768093403 27.686454519533775 31.167795117888442 20.75675659448438 34-35 20.58560358573102 27.83850051248327 31.068764268968636 20.507131632817075 36-37 20.726713284056064 27.662772853759765 30.981032653590596 20.629481208593575 38-39 20.56885573536425 27.93355331675169 30.85194540720201 20.645645540682054 40-41 20.820584583028413 27.866638287697025 30.705962265155236 20.60681486411933 42-43 20.810620759819464 28.018565699922966 30.240639178086447 20.930174362171122 44-45 20.89028935983501 28.2888317973434 29.799507050401502 21.021371792420084 46-47 21.11800052010849 28.254015859128085 29.210384163950682 21.417599456812738 48-49 21.129610215042373 28.49313547593158 29.01273857459387 21.364515734432178 50-51 21.150668549764575 28.567459696632643 28.81832748615716 21.463544267445624 52-53 21.352718001752883 28.607024552640127 28.590709427256115 21.44954801835087 54-55 21.357729065906454 28.56370037045613 28.587860235906952 21.49071032773047 56-57 21.39691216855787 28.602289027130706 28.447446148993865 21.55335265531756 58-59 21.412481344163524 28.496982705327277 28.581098563372265 21.50943738713693 60-61 21.395940190675418 28.605867198457414 28.53315830090992 21.46503430995724 62-63 21.3944424375798 28.574953509322963 28.502205298760398 21.528398754336838 64-65 21.406195633038443 28.479896109652756 28.45502400415267 21.65888425315613 66-67 21.525156663362168 28.566192417093873 28.172099927004655 21.736550992539307 68-69 21.536396172002025 28.45670858846506 28.353099162507505 21.653796077025408 70-71 21.498210955896564 28.173864475848482 28.344163015757516 21.983761552497437 72-73 21.6305400434624 28.229321323805166 28.32746171352831 21.81267691920411 74-75 21.564648716737164 28.338248473933465 28.238097630756393 21.85900517857298 76-77 21.60386891753915 28.35062705291286 28.148841916293264 21.896662113254727 78-79 21.700427707238134 28.172904606658104 28.227101267689108 21.89956641841465 80-81 21.653323705185556 28.159023974507804 28.2286825041301 21.95896981617655 82-83 21.864198293470032 28.11954325432272 28.173378401009476 21.84288005119777 84-85 22.017267102349443 28.06531147545496 28.079477387093725 21.837944035101874 86-87 21.78101665390113 28.16354590383258 28.15276095202266 21.902676490243632 88-89 21.98261657531313 27.961854515141916 28.075744087387903 21.979784822157054 90-91 21.991882850280735 27.891346941497865 28.123835657516366 21.99293455070504 92-93 22.05853424388063 27.94499090311161 28.082078938086912 21.91439591492085 94-95 21.913607416858422 27.868488937670975 28.196458717538707 22.021444927931892 96-97 22.04125444936966 27.96447780924256 28.2014237982912 21.792843943096578 98-99 23.08899329668029 29.828514976846037 28.409101992946262 18.673389733527408 100 22.0454921887637 30.7220781659937 22.231778107603002 25.0006515376396 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2378.0 1 2343.5 2 4025.0 3 6042.0 4 8593.5 5 15100.5 6 20365.5 7 23352.0 8 24772.5 9 23470.0 10 20541.0 11 17886.0 12 19689.0 13 26890.0 14 43329.5 15 66179.5 16 84651.0 17 94688.0 18 95891.0 19 89343.0 20 78691.0 21 67071.5 22 58703.0 23 56646.5 24 60292.0 25 69261.0 26 83449.5 27 98799.0 28 112600.0 29 128085.0 30 145164.5 31 162325.5 32 180939.5 33 199513.5 34 216980.0 35 234828.5 36 256073.5 37 276427.5 38 289604.5 39 298447.0 40 308894.0 41 317392.5 42 321762.5 43 327566.5 44 333520.5 45 340411.5 46 342342.5 47 337712.0 48 333551.5 49 325080.0 50 309929.5 51 293603.0 52 274633.0 53 251682.5 54 226826.5 55 199888.0 56 172085.5 57 144580.5 58 121413.0 59 101869.5 60 81233.5 61 62379.0 62 47269.5 63 34383.5 64 24515.0 65 17572.0 66 12771.0 67 9816.0 68 7446.0 69 5453.0 70 3952.5 71 2712.5 72 1924.0 73 1454.0 74 1106.0 75 764.0 76 468.0 77 293.5 78 204.5 79 139.0 80 94.0 81 62.0 82 45.0 83 29.0 84 20.0 85 15.5 86 11.0 87 8.0 88 5.0 89 3.0 90 2.5 91 2.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 2.5925891358070782E-5 2 4.666660444452741E-4 3 2.5925891358070782E-5 4 2.5925891358070782E-5 5 2.5925891358070782E-5 6 2.5925891358070782E-5 7 2.5925891358070782E-5 8 1.2962945679035391E-5 9 0.0 10-11 0.0017046273567931538 12-13 0.00919720995927561 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 6.486541464308195E-6 28-29 2.5967608265126165E-5 30-31 2.6017077479572205E-5 32-33 2.6104679896910008E-5 34-35 0.005846870718084869 36-37 0.04855616617813783 38-39 0.1557268349104107 40-41 0.1843892654817687 42-43 0.05758366966168171 44-45 0.005177110388283966 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.015037834843278206 64-65 0.10707088718276313 66-67 0.22964684839121616 68-69 0.2535907051038737 70-71 0.11675562635660884 72-73 0.007970361492414473 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86-87 0.0 88-89 0.0 90-91 0.0 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 140.0 20-21 672.0 22-23 1447.0 24-25 2755.0 26-27 5148.0 28-29 11046.0 30-31 24312.0 32-33 31469.0 34-35 41156.0 36-37 57461.0 38-39 67585.0 40-41 73152.0 42-43 89772.0 44-45 107030.0 46-47 99808.0 48-49 83917.0 50-51 71785.0 52-53 65761.0 54-55 70004.0 56-57 71451.0 58-59 68385.0 60-61 67397.0 62-63 63550.0 64-65 69370.0 66-67 75937.0 68-69 72018.0 70-71 75093.0 72-73 69980.0 74-75 67873.0 76-77 64813.0 78-79 71361.0 80-81 70815.0 82-83 70983.0 84-85 75746.0 86-87 82796.0 88-89 87820.0 90-91 87282.0 92-93 90501.0 94-95 93858.0 96-97 232463.0 98-99 437521.0 100-101 4642863.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 79.42914498408791 #Duplication Level Percentage of deduplicated Percentage of total 1 87.3675477808127 69.39529619586399 2 7.837921103952859 12.45118743479428 3 2.358792396868279 5.620705898346442 4 0.999370008337778 3.1751642114004204 5 0.5063513167545722 2.010952607569137 6 0.29730016150026806 1.4168578578958524 7 0.17944436155732432 0.9977178547499663 8 0.11246915991169826 0.7146663367091878 9 0.07991466746956488 0.5712798337915718 >10 0.25702855346618114 3.051610967102205 >50 0.0026715193244852137 0.13423570436797347 >100 8.193740208546176E-4 0.15816463254841961 >500 2.015978336894014E-4 0.1123027076987618 >1k 1.679981897372771E-4 0.18985775716178382 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 1.2962945679035391E-5 0.0 12-13 0.0 0.0 0.0 1.2962945679035391E-5 0.0 14-15 0.0 0.0 0.0 1.2962945679035391E-5 0.0 16-17 6.4814728395176955E-6 0.0 0.0 1.2962945679035391E-5 0.0 18-19 1.2962945679035391E-5 0.0 0.0 1.2962945679035391E-5 0.0 20-21 2.5925891358070782E-5 0.0 0.0 1.2962945679035391E-5 0.0 22-23 3.888883703710617E-5 0.0 0.0 2.5925891358070782E-5 0.0 24-25 3.888883703710617E-5 0.0 0.0 5.1851782716141564E-5 0.0 26-27 4.537030987662387E-5 0.0 0.0 1.2962945679035392E-4 0.0 28-29 5.1851782716141564E-5 0.0 0.0 6.092584469146634E-4 0.0 30-31 6.481472839517694E-5 0.0 0.0 0.0015361090629656938 0.0 32-33 7.777767407421234E-5 0.0 0.0 0.0038370319209944754 0.0 34-35 7.777767407421234E-5 0.0 0.0 0.0064620284209991425 0.0 36-37 7.777767407421234E-5 0.0 0.0 0.010111097629647604 0.0 38-39 9.074061975324773E-5 0.0 0.0 0.015458312722249703 0.0 40-41 1.0370356543228313E-4 0.0 0.0 0.020922194325963123 0.0 42-43 1.0370356543228313E-4 0.0 0.0 0.026476816549429787 0.0 44-45 1.0370356543228313E-4 0.0 0.0 0.03251106776302076 0.0 46-47 1.0370356543228313E-4 0.0 0.0 0.03918050331488447 0.0 48-49 1.0370356543228313E-4 0.0 0.0 0.046024938633415155 0.0 50-51 1.0370356543228313E-4 0.0 0.0 0.05246104116305623 0.0 52-53 1.0370356543228313E-4 0.0 0.0 0.059169365551957044 6.4814728395176955E-6 54-55 1.0370356543228313E-4 0.0 0.0 0.06471102482974467 1.2962945679035391E-5 56-57 1.1018503827180082E-4 0.0 0.0 0.07060916511370577 1.2962945679035391E-5 58-59 1.2962945679035392E-4 0.0 0.0 0.07673415694704999 1.2962945679035391E-5 60-61 1.2962945679035392E-4 0.0 0.0 0.08258692692113448 1.2962945679035391E-5 62-63 1.425924024693893E-4 0.0 0.0 0.08810914178040355 1.2962945679035391E-5 64-65 2.3981449506215474E-4 0.0 0.0 0.09408505973843886 1.2962945679035391E-5 66-67 2.5925891358070783E-4 0.0 0.0 0.100184125680425 1.2962945679035391E-5 68-69 2.5925891358070783E-4 0.0 0.0 0.10662022821006609 1.2962945679035391E-5 70-71 2.5925891358070783E-4 0.0 0.0 0.11198040624834722 1.2962945679035391E-5 72-73 2.5925891358070783E-4 0.0 0.0 0.11597299351749013 1.2962945679035391E-5 74-75 2.916662777782963E-4 0.0 0.0 0.11912298931749572 1.2962945679035391E-5 76-77 3.1111069629684936E-4 0.0 0.0 0.12241557751997072 1.2962945679035391E-5 78-79 3.1111069629684936E-4 0.0 0.0 0.12415261224096147 1.2962945679035391E-5 80-81 3.1111069629684936E-4 0.0 0.0 0.12471001890515998 1.2962945679035391E-5 82-83 3.1111069629684936E-4 0.0 0.0 0.12522205525948188 1.2962945679035391E-5 84-85 3.1111069629684936E-4 0.0 0.0 0.12548131417306257 1.2962945679035391E-5 86-87 3.1111069629684936E-4 0.0 0.0 0.12562390657553196 1.2962945679035391E-5 88 3.1111069629684936E-4 0.0 0.0 0.12566279541256908 1.2962945679035391E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 17850 0.0 47.74334 1 GTATCAA 32510 0.0 35.47354 1 ATCAACG 40275 0.0 28.295454 3 TCAACGC 40545 0.0 28.147823 4 TATCAAC 40790 0.0 28.019304 2 CAACGCA 40885 0.0 27.914106 5 AACGCAG 41035 0.0 27.906378 6 CGCAGAG 46105 0.0 24.829449 8 ACGCAGA 46080 0.0 24.82497 7 GCAGAGT 50810 0.0 22.448849 9 GTGGTAT 8085 0.0 22.247551 1 GTACATG 29775 0.0 20.91444 1 GAGTACT 35520 0.0 20.61868 12-13 TACATGG 29380 0.0 20.590435 2 TGGTATC 8410 0.0 20.551964 2 ACATGGG 29420 0.0 20.168901 3 CAGAGTA 50775 0.0 19.576868 10-11 AGAGTAC 49330 0.0 18.771198 10-11 GTACTTT 39225 0.0 18.622551 14-15 AGTACTT 38025 0.0 18.178263 12-13 >>END_MODULE