##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138764_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 10110658 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.705932788944104 33.0 33.0 33.0 33.0 33.0 2 32.64251495797801 33.0 33.0 33.0 33.0 33.0 3 32.71098260864921 33.0 33.0 33.0 33.0 33.0 4 36.689200940235544 37.0 37.0 37.0 37.0 37.0 5 36.69446676962073 37.0 37.0 37.0 37.0 37.0 6 36.685941607361265 37.0 37.0 37.0 37.0 37.0 7 36.67070501247298 37.0 37.0 37.0 37.0 37.0 8 36.667098026656625 37.0 37.0 37.0 37.0 37.0 9 36.66339312436441 37.0 37.0 37.0 37.0 37.0 10-11 36.66959103947538 37.0 37.0 37.0 37.0 37.0 12-13 36.66791711281303 37.0 37.0 37.0 37.0 37.0 14-15 38.847940064830595 40.0 37.0 40.0 37.0 40.0 16-17 38.7773845678491 40.0 37.0 40.0 37.0 40.0 18-19 38.84355869815792 40.0 37.0 40.0 37.0 40.0 20-21 38.86694665311276 40.0 37.0 40.0 37.0 40.0 22-23 38.86786663725976 40.0 37.0 40.0 37.0 40.0 24-25 38.860005802817795 40.0 37.0 40.0 37.0 40.0 26-27 38.7702458261948 40.0 37.0 40.0 37.0 40.0 28-29 38.65333159501702 40.0 37.0 40.0 37.0 40.0 30-31 38.4677782934468 40.0 37.0 40.0 37.0 40.0 32-33 38.35980982486588 40.0 37.0 40.0 37.0 40.0 34-35 38.32516108128179 40.0 37.0 40.0 37.0 40.0 36-37 38.28684869368435 40.0 37.0 40.0 37.0 40.0 38-39 38.221433243232276 40.0 37.0 40.0 37.0 40.0 40-41 38.20881165215229 40.0 37.0 40.0 37.0 40.0 42-43 38.18704428736447 40.0 37.0 40.0 37.0 40.0 44-45 38.08992017637969 40.0 37.0 40.0 35.0 40.0 46-47 37.718368948512136 40.0 37.0 40.0 33.0 40.0 48-49 37.892964981043406 40.0 37.0 40.0 33.0 40.0 50-51 37.87132811553968 40.0 37.0 40.0 33.0 40.0 52-53 37.85048781693255 40.0 37.0 40.0 33.0 40.0 54-55 37.76879145480906 40.0 37.0 40.0 33.0 40.0 56-57 37.59108572143727 40.0 37.0 40.0 33.0 40.0 58-59 37.43368353434731 40.0 37.0 40.0 33.0 40.0 60-61 37.23681309031541 37.0 37.0 40.0 33.0 40.0 62-63 37.10863597594299 37.0 37.0 40.0 33.0 40.0 64-65 36.96767186586964 37.0 37.0 40.0 33.0 40.0 66-67 36.79396932808271 37.0 37.0 40.0 33.0 40.0 68-69 36.618994830692216 37.0 37.0 40.0 33.0 40.0 70-71 36.41481582575888 37.0 37.0 40.0 33.0 40.0 72-73 36.1436967917257 37.0 37.0 37.0 33.0 40.0 74-75 35.81968167232522 37.0 37.0 37.0 33.0 40.0 76-77 33.64109610802843 35.0 33.0 37.0 30.0 37.0 78-79 35.3147580673529 37.0 33.0 37.0 33.0 37.0 80-81 35.51725321851659 37.0 33.0 37.0 33.0 37.0 82-83 35.347335297105545 37.0 33.0 37.0 33.0 37.0 84-85 35.19995719717941 37.0 33.0 37.0 33.0 37.0 86-87 35.111175138632 37.0 33.0 37.0 33.0 37.0 88-89 34.94577239885243 37.0 33.0 37.0 33.0 37.0 90-91 34.8880775310595 37.0 33.0 37.0 33.0 37.0 92-93 34.935997327991146 37.0 33.0 37.0 33.0 37.0 94-95 34.92225937854402 37.0 33.0 37.0 33.0 37.0 96-97 34.92144867631636 37.0 33.0 37.0 33.0 37.0 98-99 34.932930083254824 37.0 33.0 37.0 33.0 37.0 100 34.78136847471078 37.0 33.0 37.0 33.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 15 1.0 16 0.0 17 0.0 18 5.0 19 22.0 20 95.0 21 236.0 22 880.0 23 2480.0 24 5888.0 25 11795.0 26 21135.0 27 34374.0 28 52054.0 29 73866.0 30 102207.0 31 138865.0 32 188944.0 33 261506.0 34 375944.0 35 585519.0 36 1151214.0 37 3139347.0 38 3801829.0 39 162452.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.42360877240717 20.897652842935923 14.959126790672455 22.719611593984446 2 14.354507518770593 20.900044893349364 43.241701381783464 21.503746206096576 3 17.22811880573142 27.974126706108223 32.125597772726344 22.67215671543402 4 11.593994336866537 19.00569864055323 38.74178502940017 30.658521993180067 5 12.008527240119014 38.455809548281586 35.90132668925472 13.63433652234469 6 27.672425243977717 38.75780772703495 18.899751025081756 14.67001600390558 7 24.048031695665276 34.593478940092616 23.21407995543712 18.144409408804986 8 23.879773589391867 36.27135209907724 21.748517430667462 18.10035688086343 9 25.132854854748327 16.5321980033347 21.665731350026874 36.6692157918901 10-11 23.348907764679655 27.20212682254549 28.887946632413104 20.561018780361746 12-13 24.848036376015067 25.048170138129684 29.149735178610207 20.954058307245038 14-15 21.929675595792084 26.26972942809459 27.675943543931563 24.12465143218176 16-17 20.288130604358294 29.64123106527785 28.25964937197955 21.81098895838431 18-19 20.211666738208333 27.45252089428799 31.616231109785335 20.71958125771834 20-21 21.149323046889624 26.615515350760603 31.674191115375866 20.560970486973908 22-23 20.681968342458816 27.099030148866277 31.584748682617477 20.63425282605743 24-25 20.51254522934466 27.259780138445645 31.849894111323003 20.3777805208867 26-27 20.591918835503805 27.48773485546465 31.724791086130356 20.19555522290119 28-29 20.0489520283404 27.3728595753361 31.823808974888745 20.75437942143476 30-31 20.316479981986294 27.461500896039766 31.900476263181552 20.32154285879239 32-33 19.56746247951247 27.309294400721807 32.37051660131598 20.75272651844974 34-35 19.677783479942633 27.66911360279382 31.79495626154143 20.858146655722123 36-37 20.045661885853676 27.83241426886935 31.80687219568854 20.315051649588437 38-39 20.160400325705524 27.580549581379 31.511728700383017 20.747321392532463 40-41 20.296661816999475 27.67212570568434 31.464088186920424 20.56712429039576 42-43 20.806654339525895 27.64233754602526 31.09551085435162 20.45549726009723 44-45 20.4523250762566 28.41463342238682 30.284894483171392 20.848147018185188 46-47 21.218547393557063 27.9572697925713 29.09252894434668 21.731653869524955 48-49 21.113152884494767 28.136262683222256 29.014804884878686 21.735779547404295 50-51 20.75581209570821 28.437024962289755 29.094955763479057 21.712207178522974 52-53 20.892609532002922 28.726680990432445 29.166303641210728 21.214405836353905 54-55 20.90609620937778 28.845425944705244 28.601196316366533 21.64728152955044 56-57 21.52749628173973 29.150203799104997 27.810545833243705 21.51175408591157 58-59 20.76418465093461 29.496486794169073 28.807675756808187 20.931652798088123 60-61 21.36598384978626 29.950942139612373 27.703884709129234 20.979189301472132 62-63 20.971888124342364 30.283705385943883 27.569519450301883 21.17488703941187 64-65 21.063533612476046 29.911764392769218 27.710000246762107 21.314701747992626 66-67 21.20364406901567 29.509341932956634 27.718772066157783 21.568241931869913 68-69 21.43211221920759 28.97224167578803 28.015352736328776 21.58029336867561 70-71 21.452665082520824 28.40983549640525 28.153720555135877 21.983778865938046 72-73 21.5967149107831 28.495815789162513 28.186605042508635 21.720864257545752 74-75 21.506646950162764 28.575329835040776 28.17088958831514 21.747133626481325 76-77 21.477357001556946 28.437287779748544 27.99111014780976 22.09424507088475 78-79 21.658239019463306 28.322152479371105 28.031535955155213 21.98807254601038 80-81 21.59548046914324 28.186742801831816 28.187617280738582 22.03015944828636 82-83 21.84018279082553 28.09088840254622 28.219935860649493 21.848992945978758 84-85 22.058566493493935 28.02337001978052 28.0308102650849 21.887253221640652 86-87 21.609772575398196 28.171005382700454 28.14489230927396 22.07432973262739 88-89 21.984009760701404 27.881830708945586 28.07909267722256 22.05506685313045 90-91 22.041648680385084 27.775680331259657 28.181200776610915 22.00147021174434 92-93 22.09742939346519 27.779232914010564 28.099744588616062 22.02359310390818 94-95 21.82897638409832 27.72356851727088 28.290975815866116 22.156479282764685 96-97 21.978945560236323 27.90607469871752 28.27900895394535 21.835970787100806 98-99 23.06814881933411 29.82501452831407 28.359692476079886 18.747144176271938 100 29.621495204413694 40.82584350650219 29.552661289084114 0.0 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 4109.0 1 4047.5 2 6948.5 3 10351.0 4 15174.0 5 27803.0 6 37476.0 7 41874.5 8 42643.0 9 38724.5 10 33286.5 11 28602.0 12 31644.5 13 44867.5 14 75423.5 15 117863.0 16 151465.5 17 168948.0 18 170841.0 19 158631.5 20 138066.5 21 115058.5 22 97371.0 23 90903.5 24 94134.5 25 106622.5 26 125899.5 27 145337.0 28 162993.5 29 184375.5 30 205187.0 31 221624.5 32 242724.0 33 268020.5 34 288312.5 35 308059.0 36 333347.0 37 356270.0 38 366866.0 39 368684.5 40 377774.0 41 389405.5 42 395968.5 43 403999.0 44 418361.0 45 435032.5 46 455768.5 47 479635.5 48 500442.5 49 488437.5 50 450287.0 51 418972.0 52 386031.0 53 348036.0 54 304281.5 55 258780.0 56 217328.5 57 181820.5 58 151673.0 59 123469.0 60 96205.0 61 73218.5 62 54816.0 63 39530.0 64 27691.0 65 20044.0 66 15184.5 67 11815.5 68 8932.0 69 6621.0 70 5050.0 71 3943.0 72 3117.0 73 2438.0 74 1776.0 75 1122.0 76 743.5 77 512.0 78 329.0 79 195.0 80 134.5 81 100.0 82 72.0 83 56.0 84 44.5 85 34.5 86 27.0 87 18.0 88 12.0 89 9.0 90 5.5 91 3.0 92 3.0 93 2.0 94 1.5 95 1.5 96 1.0 97 1.0 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 9.890553117314422E-6 2 2.8682604040211824E-4 3 9.890553117314422E-6 4 9.890553117314422E-6 5 9.890553117314422E-6 6 9.890553117314422E-6 7 9.890553117314422E-6 8 9.890553117314422E-6 9 0.0 10-11 0.0017456826252059956 12-13 0.00909436359137061 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.005759250583036328 36-37 0.0468749913182768 38-39 0.15141216800091303 40-41 0.17989299710609155 42-43 0.05631534633338341 44-45 0.005188804922824345 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.01560214907490037 64-65 0.10522765300102589 66-67 0.22679123617894936 68-69 0.2531424608912801 70-71 0.11827028696842702 72-73 0.008018794363038564 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86-87 0.0 88-89 0.0 90-91 0.0 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 218.0 20-21 1074.0 22-23 2413.0 24-25 4560.0 26-27 9240.0 28-29 19931.0 30-31 40822.0 32-33 50882.0 34-35 64172.0 36-37 80717.0 38-39 97424.0 40-41 117166.0 42-43 144710.0 44-45 177797.0 46-47 168248.0 48-49 135631.0 50-51 114283.0 52-53 107679.0 54-55 118321.0 56-57 127021.0 58-59 127914.0 60-61 119343.0 62-63 113449.0 64-65 144713.0 66-67 164798.0 68-69 141301.0 70-71 120257.0 72-73 107766.0 74-75 104946.0 76-77 100872.0 78-79 107986.0 80-81 111566.0 82-83 105941.0 84-85 118480.0 86-87 122429.0 88-89 126767.0 90-91 125162.0 92-93 127468.0 94-95 132225.0 96-97 286026.0 98-99 1881686.0 100-101 4037254.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 77.17308629768806 #Duplication Level Percentage of deduplicated Percentage of total 1 87.42799708221631 67.47088363659898 2 7.39811478910161 11.418707021190816 3 2.271130940437123 5.258105521791104 4 1.0483388761364865 3.2361418622920954 5 0.5952769786848502 2.2969680823536476 6 0.3570747614059816 1.6533936826026112 7 0.22841595206970872 1.2339294786590944 8 0.16169626486707536 0.9982879842080504 9 0.10322097794671481 0.716929329493222 >10 0.40154578999263346 4.6738065532274735 >50 0.005142006702546107 0.25761831749064557 >100 0.0015168265292966848 0.1997166279257967 >500 2.4882539767990083E-4 0.14274749739864778 >1k 2.7992851199018574E-4 0.44276440476779827 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.901497805582979E-5 2 0.0 0.0 0.0 0.0 8.901497805582979E-5 3 0.0 0.0 0.0 0.0 8.901497805582979E-5 4 0.0 0.0 0.0 0.0 1.7802995611165958E-4 5 0.0 0.0 0.0 0.0 1.7802995611165958E-4 6 0.0 0.0 0.0 0.0 2.670449341674894E-4 7 0.0 0.0 0.0 9.890553117314422E-6 2.670449341674894E-4 8 0.0 0.0 0.0 9.890553117314422E-6 3.7584101845794803E-4 9 0.0 0.0 0.0 9.890553117314422E-6 4.648559965137778E-4 10-11 0.0 0.0 9.890553117314422E-6 9.890553117314422E-6 4.6980127307243505E-4 12-13 0.0 0.0 9.890553117314422E-6 1.9781106234628844E-5 4.994729324243783E-4 14-15 0.0 0.0 9.890553117314422E-6 2.9671659351943267E-5 6.824481650946951E-4 16-17 0.0 0.0 9.890553117314422E-6 2.9671659351943267E-5 8.753139508823264E-4 18-19 0.0 0.0 9.890553117314422E-6 3.461693591060048E-5 9.940005882900995E-4 20-21 0.0 0.0 9.890553117314422E-6 3.956221246925769E-5 0.0010038911414074138 22-23 0.0 0.0 9.890553117314422E-6 1.0385080773180144E-4 0.0011769758209604162 24-25 0.0 0.0 9.890553117314422E-6 3.1155242319540427E-4 0.0013747868833067045 26-27 0.0 0.0 9.890553117314422E-6 6.775028885360379E-4 0.0014242396488932767 28-29 0.0 0.0 9.890553117314422E-6 0.0015973243284462793 0.0014440207551279056 30-31 4.945276558657211E-6 0.0 9.890553117314422E-6 0.003842479886076653 0.001478637691038506 32-33 9.890553117314422E-6 0.0 9.890553117314422E-6 0.007160760456935641 0.001661612923708823 34-35 9.890553117314422E-6 0.0 9.890553117314422E-6 0.010805429280666006 0.0017704090079992815 36-37 9.890553117314422E-6 0.0 9.890553117314422E-6 0.015364974267747956 0.0017901901142339104 38-39 1.9781106234628844E-5 0.0 9.890553117314422E-6 0.0217048188159465 0.0018594239860551115 40-41 1.9781106234628844E-5 0.0 9.890553117314422E-6 0.02798532004544116 0.0018989861985243691 42-43 1.9781106234628844E-5 0.0 9.890553117314422E-6 0.034676279229304365 0.0019237125813176552 44-45 1.9781106234628844E-5 0.0 9.890553117314422E-6 0.04259861227627322 0.00196822007034557 46-47 1.9781106234628844E-5 0.0 9.890553117314422E-6 0.0515001100818562 0.002042399218725428 48-49 1.9781106234628844E-5 0.0 9.890553117314422E-6 0.05947189589441162 0.0020967972608706576 50-51 1.9781106234628844E-5 0.0 9.890553117314422E-6 0.06675134298875504 0.002101742537429315 52-53 1.9781106234628844E-5 0.0 9.890553117314422E-6 0.07380825263795887 0.002299553599775603 54-55 1.9781106234628844E-5 0.0 9.890553117314422E-6 0.07981676365672738 0.002512200491797863 56-57 1.9781106234628844E-5 0.0 9.890553117314422E-6 0.08573625969744006 0.0025616532573844355 58-59 1.9781106234628844E-5 0.0 9.890553117314422E-6 0.09164091990847678 0.0026160512995296644 60-61 1.9781106234628844E-5 0.0 9.890553117314422E-6 0.09744667458834033 0.0026852851713508657 62-63 1.9781106234628844E-5 0.0 9.890553117314422E-6 0.10208039872380215 0.0027594643197307238 64-65 1.9781106234628844E-5 0.0 9.890553117314422E-6 0.10675863034829186 0.002769354872848038 66-67 1.9781106234628844E-5 0.0 9.890553117314422E-6 0.11335562927754059 0.0028039718087586388 68-69 1.9781106234628844E-5 0.0 9.890553117314422E-6 0.1207389271796158 0.0028237529149932675 70-71 1.9781106234628844E-5 0.0 9.890553117314422E-6 0.12661886100785924 0.002922658446166412 72-73 1.9781106234628844E-5 0.0 9.890553117314422E-6 0.13166798837424826 0.0031353053381886716 74-75 1.9781106234628844E-5 0.0 9.890553117314422E-6 0.13549563243064894 0.0031353053381886716 76-77 1.9781106234628844E-5 0.0 9.890553117314422E-6 0.13916997291373123 0.0031451958913059864 78-79 1.9781106234628844E-5 0.0 9.890553117314422E-6 0.14165250174617716 0.0031550864444233008 80-81 1.9781106234628844E-5 0.0 9.890553117314422E-6 0.14237945740029978 0.003189703380333901 82-83 1.9781106234628844E-5 0.0 9.890553117314422E-6 0.14283936812025488 0.003283663634948388 84-85 1.9781106234628844E-5 0.0 9.890553117314422E-6 0.14316575637312626 0.0032886089115070453 86-87 1.9781106234628844E-5 0.0 9.890553117314422E-6 0.14332895049956196 0.0032984994646243597 88 1.9781106234628844E-5 0.0 9.890553117314422E-6 0.14335367688235523 0.0033331164005349604 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 15095 0.0 48.53765 1 TATACAC 17425 0.0 44.23976 3 GGTATCA 31930 0.0 41.904137 1 TTATACA 20025 0.0 37.363148 2 GTATCAA 56095 0.0 33.4586 1 TACACAT 25745 0.0 29.619072 5 ATACACA 27985 0.0 27.958519 4 ACACATC 26725 0.0 27.883492 6 TATCAAC 70275 0.0 26.503492 2 ATCAACG 70450 0.0 26.40928 3 AACGCAG 70555 0.0 26.387524 6 ACATCTC 28390 0.0 26.263649 8 TCAACGC 71495 0.0 26.023272 4 CAACGCA 71480 0.0 25.984964 5 CACATCT 28760 0.0 25.925768 7 ACGCAGA 78235 0.0 23.767939 7 CGCAGAG 78755 0.0 23.590782 8 CATCTCC 32255 0.0 23.005491 9 TGCGCGA 625 7.2759576E-12 22.302382 94 GCAGAGT 85125 0.0 21.774015 9 >>END_MODULE