##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138763_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 10086439 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.66088725664231 33.0 33.0 33.0 33.0 33.0 2 32.602015141319946 33.0 33.0 33.0 33.0 33.0 3 32.669191277516276 33.0 33.0 33.0 33.0 33.0 4 36.638561934494426 37.0 37.0 37.0 37.0 37.0 5 36.64435724044928 37.0 37.0 37.0 37.0 37.0 6 36.6369924013817 37.0 37.0 37.0 37.0 37.0 7 36.61805092956989 37.0 37.0 37.0 37.0 37.0 8 36.614244035977414 37.0 37.0 37.0 37.0 37.0 9 36.61901965599554 37.0 37.0 37.0 37.0 37.0 10-11 36.62237802657608 37.0 37.0 37.0 37.0 37.0 12-13 36.61920168257598 37.0 37.0 37.0 37.0 37.0 14-15 38.74021857466248 40.0 37.0 40.0 37.0 40.0 16-17 38.656098103602275 40.0 37.0 40.0 37.0 40.0 18-19 38.73290613267973 40.0 37.0 40.0 37.0 40.0 20-21 38.76958041549766 40.0 37.0 40.0 37.0 40.0 22-23 38.76942043276064 40.0 37.0 40.0 37.0 40.0 24-25 38.75758913576652 40.0 37.0 40.0 37.0 40.0 26-27 38.66476584360069 40.0 37.0 40.0 37.0 40.0 28-29 38.54737612467984 40.0 37.0 40.0 37.0 40.0 30-31 38.37071467141267 40.0 37.0 40.0 37.0 40.0 32-33 38.23583898303143 40.0 37.0 40.0 37.0 40.0 34-35 38.17508980315673 40.0 37.0 40.0 37.0 40.0 36-37 38.161711006359354 40.0 37.0 40.0 37.0 40.0 38-39 38.09676343002023 40.0 37.0 40.0 37.0 40.0 40-41 38.095366560806234 40.0 37.0 40.0 37.0 40.0 42-43 38.0717574736326 40.0 37.0 40.0 37.0 40.0 44-45 37.97061266099882 40.0 37.0 40.0 33.0 40.0 46-47 37.601192980309875 40.0 37.0 40.0 33.0 40.0 48-49 37.79248877473279 40.0 37.0 40.0 33.0 40.0 50-51 37.77539332802711 40.0 37.0 40.0 33.0 40.0 52-53 37.77066431600788 40.0 37.0 40.0 33.0 40.0 54-55 37.63929285740206 40.0 37.0 40.0 33.0 40.0 56-57 37.4558766848266 40.0 37.0 40.0 33.0 40.0 58-59 37.29799607259301 38.5 37.0 40.0 33.0 40.0 60-61 37.100224028531535 37.0 37.0 40.0 33.0 40.0 62-63 36.97962134836864 37.0 37.0 40.0 33.0 40.0 64-65 36.84445230598594 37.0 37.0 40.0 33.0 40.0 66-67 36.65332861572238 37.0 37.0 40.0 33.0 40.0 68-69 36.48419882129657 37.0 37.0 40.0 33.0 40.0 70-71 36.28728689192211 37.0 37.0 38.5 33.0 40.0 72-73 36.02528426606978 37.0 37.0 37.0 33.0 40.0 74-75 35.70886341082114 37.0 35.0 37.0 33.0 40.0 76-77 33.517315033188495 35.0 33.0 37.0 27.0 37.0 78-79 35.22068995507982 37.0 33.0 37.0 33.0 37.0 80-81 35.439168692111025 37.0 33.0 37.0 33.0 37.0 82-83 35.275590163724075 37.0 33.0 37.0 33.0 37.0 84-85 35.13642646751772 37.0 33.0 37.0 33.0 37.0 86-87 35.050510172088124 37.0 33.0 37.0 33.0 37.0 88-89 34.88453885222434 37.0 33.0 37.0 33.0 37.0 90-91 34.83088121503712 37.0 33.0 37.0 33.0 37.0 92-93 34.881597255118336 37.0 33.0 37.0 33.0 37.0 94-95 34.87090022535829 37.0 33.0 37.0 33.0 37.0 96-97 34.872013533308866 37.0 33.0 37.0 33.0 37.0 98-99 34.88448790277424 37.0 33.0 37.0 33.0 37.0 100 34.732593182136334 37.0 33.0 37.0 33.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 2.0 17 5.0 18 8.0 19 23.0 20 86.0 21 294.0 22 1098.0 23 3049.0 24 6923.0 25 13618.0 26 23989.0 27 39221.0 28 58536.0 29 82184.0 30 113173.0 31 153257.0 32 207440.0 33 281930.0 34 399097.0 35 608081.0 36 1174735.0 37 3167846.0 38 3601318.0 39 150526.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.15605761599614 20.83757045973131 15.090098731613299 22.91627319265925 2 14.433078306585912 20.80839998996668 43.16134618193045 21.59717552151696 3 17.158579815365886 27.841739920992897 32.37892278094292 22.6207574826983 4 11.546309474060955 19.055255895665812 38.2048265814433 31.19360804882994 5 12.023643636230243 38.25687668636144 35.87057270482584 13.848906972582483 6 27.649733994273696 38.77850027715436 18.534076998646796 15.037688729925147 7 24.084312428660386 34.52407425932468 22.816292809839588 18.575320502175348 8 24.018669823645354 36.05041106190422 21.60625203924835 18.324667075202075 9 25.010950347387258 16.41275145893922 21.353911063548896 37.22238713012463 10-11 23.342256183438952 26.999155734031284 28.756350274553743 20.902237807976014 12-13 24.849045116196727 24.899523293061016 28.862754239445525 21.388677351296728 14-15 22.090893525455314 26.158171382387778 27.327974719323638 24.422960372833266 16-17 20.397163954493752 29.67392158917533 27.942557328706396 21.986357127624526 18-19 20.055517115604427 27.14653803983745 31.65494283958888 21.143002004969247 20-21 20.9714122347412 26.14948846544392 31.545307640297164 21.333791659517715 22-23 20.854914303002815 26.94770658058971 31.45046923889381 20.74690987751367 24-25 20.58428617384108 27.281726045173514 31.79043252208845 20.343555258896956 26-27 20.22571443757419 27.31424196275254 32.07078200059146 20.389261599081813 28-29 19.52828632772046 26.881538441585406 32.59666976360799 20.99350546708615 30-31 20.266335914642376 26.8417617090343 31.503631953053624 21.3882704232697 32-33 20.60888627921331 27.111442189356445 32.15960697951892 20.12006455191133 34-35 20.355258208288152 28.02159275854159 31.72630623593048 19.89684279723978 36-37 20.143252416594905 27.566955470100336 31.17949992876848 21.110292184536288 38-39 20.21218051952386 27.258105947403266 31.5433527750003 20.986360758072575 40-41 20.20008413167965 27.35038965702249 31.710132961456 20.73939324984186 42-43 20.900845361334017 27.239217428957634 31.30237097110217 20.557566238606174 44-45 20.399055786083288 28.121939049106004 30.520262643485584 20.958742521325124 46-47 21.42643079412918 27.581051416625048 29.048135172693414 21.94438261655236 48-49 21.2981106337105 27.683623958142807 29.043194587950815 21.97507082019588 50-51 20.695798575311517 28.134404943558877 29.181729433360488 21.988067047769118 52-53 20.9053765720966 28.564371793121595 29.35216118744212 21.178090447339688 54-55 20.90708768290629 28.65459994544842 28.577801536354574 21.860510835290714 56-57 21.676654493051252 29.04820443290757 27.6717140362784 21.603427037762778 58-59 20.7683456548455 29.555088359289826 28.907238786658485 20.769327199206185 60-61 21.47685002046968 30.279582879873512 27.331394048658257 20.91217305099855 62-63 20.863353598687688 30.684245944374393 27.251808880135215 21.20059157680271 64-65 20.938075789072386 30.230697311792703 27.48784944249629 21.343377456638617 66-67 21.277279158463962 29.6819458597478 27.518729214515552 21.522045767272687 68-69 21.43960550961509 28.97556395836093 27.836445311207076 21.748385220816903 70-71 21.56888455455119 28.411610925809068 27.92830723169676 22.091197287942986 72-73 21.736404995631165 28.405883531526698 27.98674966669096 21.870961806151175 74-75 21.607344305132774 28.436105359828286 27.986233401823558 21.970316933215386 76-77 21.624519653568665 28.28562099767832 27.89487509332756 22.194984255425457 78-79 21.779285262586033 28.270488637633907 27.87684703333283 22.07337906644723 80-81 21.687662569565504 28.11956324128927 28.016255632754138 22.176518556391084 82-83 21.955249323744173 27.913094549055156 28.116300157135303 22.015355970065364 84-85 22.190925447438158 27.81992764352595 27.911656219695452 22.07749068934044 86-87 21.845173505383396 28.063879927948104 27.934757304380582 22.156189262287917 88-89 22.099570343469274 27.76060640974744 27.83761964753469 22.302203599248596 90-91 22.22923495141014 27.652500552061642 27.990019271750967 22.12824522477725 92-93 22.168223058253123 27.691113672656613 27.96928494771483 22.171378321375432 94-95 21.995863049617878 27.621404177876315 28.113569875167542 22.269162897338266 96-97 22.164423208181766 27.703459522927904 28.04009612361463 22.092021145275694 98-99 23.193924918591406 29.613479594398584 28.21578846206855 18.976807024941465 100 30.008708586372556 40.553071257837594 29.438220155789846 0.0 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 4656.0 1 4468.0 2 7424.5 3 11074.5 4 16214.5 5 29384.0 6 39524.5 7 44292.5 8 45606.0 9 42010.5 10 36411.0 11 31335.5 12 34127.5 13 47427.0 14 79077.5 15 123599.0 16 159350.5 17 178477.5 18 179955.5 19 166020.0 20 143998.5 21 119522.0 22 100269.0 23 93503.0 24 98527.0 25 111765.5 26 130491.0 27 148905.0 28 163925.5 29 180871.0 30 197533.0 31 212963.5 32 234495.0 33 259388.5 34 279908.5 35 300638.0 36 321895.5 37 341094.0 38 353599.0 39 357113.5 40 367318.0 41 377757.5 42 386648.5 43 401244.5 44 416041.5 45 432623.5 46 460207.0 47 492408.0 48 525018.5 49 523409.0 50 487939.5 51 461315.5 52 426428.5 53 379799.5 54 330843.5 55 281828.0 56 238561.5 57 200238.0 58 166949.0 59 135258.0 60 105529.0 61 81977.0 62 61528.5 63 44577.5 64 32132.0 65 23596.0 66 17628.5 67 13087.5 68 9435.0 69 6765.5 70 5003.0 71 3871.5 72 3130.0 73 2511.0 74 1815.0 75 1151.5 76 781.5 77 530.0 78 322.0 79 212.5 80 152.5 81 108.0 82 79.5 83 49.0 84 27.5 85 20.5 86 19.5 87 16.5 88 14.0 89 11.0 90 7.0 91 4.0 92 2.5 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 3.965720706782642E-5 2 4.560578812800038E-4 3 3.965720706782642E-5 4 3.965720706782642E-5 5 3.965720706782642E-5 6 1.982860353391321E-5 7 1.982860353391321E-5 8 1.982860353391321E-5 9 9.914301766956604E-6 10-11 0.0016110740371304483 12-13 0.008848514327008769 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 4.962741720260969E-6 28-29 2.4845755067962582E-5 30-31 3.9868839491839744E-5 32-33 4.0063233805076244E-5 34-35 0.005952437954276607 36-37 0.046333688063452644 38-39 0.1507142497932114 40-41 0.1810609373856322 42-43 0.05561492418905078 44-45 0.005158137012287511 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.014748295340769792 64-65 0.10531163645562572 66-67 0.23005665356314373 68-69 0.25555612923203314 70-71 0.11994942820240588 72-73 0.00810517496717404 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86-87 0.0 88-89 0.0 90-91 0.0 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 222.0 20-21 1333.0 22-23 2796.0 24-25 5052.0 26-27 10318.0 28-29 22826.0 30-31 45944.0 32-33 59403.0 34-35 79358.0 36-37 104530.0 38-39 125146.0 40-41 132910.0 42-43 162476.0 44-45 196253.0 46-47 178864.0 48-49 148577.0 50-51 124164.0 52-53 113522.0 54-55 136600.0 56-57 147438.0 58-59 144903.0 60-61 147778.0 62-63 147920.0 64-65 164867.0 66-67 176217.0 68-69 145755.0 70-71 117307.0 72-73 108491.0 74-75 107063.0 76-77 100716.0 78-79 102987.0 80-81 106492.0 82-83 114090.0 84-85 111949.0 86-87 111972.0 88-89 124623.0 90-91 123710.0 92-93 124760.0 94-95 129504.0 96-97 271746.0 98-99 1791231.0 100-101 3814626.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 77.9268271784714 #Duplication Level Percentage of deduplicated Percentage of total 1 87.64499143958136 68.29896100970862 2 7.410405992181936 11.549388541501413 3 2.184050367048214 5.1058834650612965 4 0.986666367639141 3.0755111805530184 5 0.553944973320408 2.1583587101161195 6 0.3438902453694747 1.6078965431561505 7 0.2143746931461991 1.1693877764969185 8 0.1568304855757491 0.9777041716621723 9 0.10390970449621667 0.7287618225998439 >10 0.39324174954044794 4.728350239201529 >50 0.006113343527933359 0.3147721174026968 >100 0.0014344731386786345 0.19417617487083946 >500 1.169323994109479E-4 0.0677717262674054 >1k 2.9233034799681433E-5 0.023076521401965967 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.9742905300869813E-5 2 0.0 0.0 0.0 0.0 2.9742905300869813E-5 3 0.0 0.0 0.0 0.0 2.9742905300869813E-5 4 0.0 0.0 0.0 0.0 3.965720706782642E-5 5 0.0 0.0 0.0 0.0 3.965720706782642E-5 6 0.0 0.0 0.0 0.0 6.940011236869622E-5 7 0.0 0.0 0.0 0.0 6.940011236869622E-5 8 0.0 0.0 0.0 0.0 1.0905731943652264E-4 9 0.0 0.0 0.0 0.0 1.8837173357217547E-4 10-11 0.0 0.0 0.0 0.0 1.8837173357217547E-4 12-13 0.0 0.0 0.0 0.0 2.1811463887304528E-4 14-15 0.0 0.0 0.0 9.914301766956604E-6 3.222148074260896E-4 16-17 0.0 0.0 0.0 9.914301766956604E-6 4.064863724452208E-4 18-19 0.0 0.0 0.0 4.957150883478302E-5 4.858007865808736E-4 20-21 0.0 0.0 0.0 8.922871590260943E-5 4.907579374643519E-4 22-23 0.0 0.0 0.0 9.914301766956603E-5 5.254579936487E-4 24-25 0.0 0.0 0.0 1.6854313003826228E-4 5.552008989495698E-4 26-27 0.0 0.0 0.0 3.1725765654261134E-4 5.998152569008746E-4 28-29 0.0 0.0 0.0 0.001016215931113052 6.146867095513094E-4 30-31 0.0 0.0 0.0 0.0026223328173600215 6.24601011318266E-4 32-33 0.0 0.0 0.0 0.005264494238253956 6.543439166191359E-4 34-35 0.0 0.0 0.0 0.00864031398990268 6.940011236869622E-4 36-37 0.0 0.0 0.0 0.013587550571614026 6.989582745704406E-4 38-39 0.0 0.0 0.0 0.021380191760441918 7.23744028987832E-4 40-41 0.0 0.0 0.0 0.02951983351111329 7.435726325217453E-4 42-43 0.0 0.0 0.0 0.03698034559074813 7.485297834052237E-4 44-45 0.0 0.0 0.0 0.04597757444426125 7.534869342887019E-4 46-47 0.0 0.0 0.0 0.05608520509567351 7.534869342887019E-4 48-49 0.0 0.0 0.0 0.06526584853187532 7.733155378226151E-4 50-51 0.0 0.0 0.0 0.07405487704828234 7.782726887060934E-4 52-53 0.0 0.0 0.0 0.08236306192899198 8.575871028417462E-4 54-55 0.0 0.0 0.0 0.09020031747577117 9.468158187443557E-4 56-57 0.0 0.0 0.0 0.09822098760523906 9.666444222782689E-4 58-59 0.0 0.0 0.0 0.10663327265450176 9.716015731617472E-4 60-61 0.0 0.0 0.0 0.1141383990920879 9.914301766956604E-4 62-63 0.0 0.0 0.0 0.1215840397190723 0.0010112587802295736 64-65 0.0 0.0 0.0 0.1291932663252115 0.0010112587802295736 66-67 0.0 0.0 0.0 0.13704539332464113 0.001036044534646965 68-69 0.0 0.0 0.0 0.14429770506716988 0.001065787439947835 70-71 0.0 0.0 0.0 0.15004304294112125 0.0011203160996660962 72-73 0.0 0.0 0.0 0.15468293616805695 0.001249202022636532 74-75 0.0 0.0 0.0 0.1582570419550448 0.001249202022636532 76-77 0.0 0.0 0.0 0.161751833327897 0.0012591163244034887 78-79 0.0 0.0 0.0 0.16396272262192832 0.0012739877770539237 80-81 0.0 0.0 0.0 0.16466168089649874 0.0012888592297043585 82-83 0.0 0.0 0.0 0.16530611051135094 0.0012888592297043585 84-85 0.0 0.0 0.0 0.16562832531877703 0.0012888592297043585 86-87 0.0 0.0 0.0 0.16578199699616486 0.0012888592297043585 88 0.0 0.0 0.0 0.16579686844881528 0.0012888592297043585 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 17990 0.0 53.88168 1 TATACAC 20840 0.0 47.692944 3 TTATACA 22615 0.0 43.51829 2 GGTATCA 33430 0.0 42.028225 1 ATACACA 31175 0.0 32.370358 4 GTATCAA 56940 0.0 31.983776 1 TACACAT 31445 0.0 31.857162 5 ACACATC 33890 0.0 28.92927 6 CACATCT 36670 0.0 26.769108 7 ACATCTC 37160 0.0 26.542217 8 TATCAAC 72350 0.0 25.036583 2 ATCAACG 73305 0.0 24.63573 3 TCAACGC 73730 0.0 24.514902 4 AACGCAG 73635 0.0 24.4921 6 CAACGCA 73885 0.0 24.42169 5 CATCTCC 41255 0.0 23.860296 9 ACGCAGA 82020 0.0 21.984354 7 CGCAGAG 82190 0.0 21.915129 8 ACGGTAC 980 0.0 21.909378 3 GCAGAGT 88990 0.0 20.161547 9 >>END_MODULE