##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138762_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 8162299 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.724573922126595 33.0 33.0 33.0 33.0 33.0 2 32.65329241185602 33.0 33.0 33.0 33.0 33.0 3 32.73009393554439 33.0 33.0 33.0 33.0 33.0 4 36.71245184720628 37.0 37.0 37.0 37.0 37.0 5 36.716790085734424 37.0 37.0 37.0 37.0 37.0 6 36.7130320758894 37.0 37.0 37.0 37.0 37.0 7 36.70008449825227 37.0 37.0 37.0 37.0 37.0 8 36.69350179404112 37.0 37.0 37.0 37.0 37.0 9 36.68459082422734 37.0 37.0 37.0 37.0 37.0 10-11 36.692594084093216 37.0 37.0 37.0 37.0 37.0 12-13 36.69161127275538 37.0 37.0 37.0 37.0 37.0 14-15 38.92407329111565 40.0 38.5 40.0 37.0 40.0 16-17 38.863252559113555 40.0 37.0 40.0 37.0 40.0 18-19 38.916642480262 40.0 38.5 40.0 37.0 40.0 20-21 38.936542639344225 40.0 40.0 40.0 37.0 40.0 22-23 38.94099712420924 40.0 40.0 40.0 37.0 40.0 24-25 38.93530635272388 40.0 40.0 40.0 37.0 40.0 26-27 38.85536615262029 40.0 37.0 40.0 37.0 40.0 28-29 38.75242781012466 40.0 37.0 40.0 37.0 40.0 30-31 38.58851991447446 40.0 37.0 40.0 37.0 40.0 32-33 38.47926731100721 40.0 37.0 40.0 37.0 40.0 34-35 38.44565363947497 40.0 37.0 40.0 37.0 40.0 36-37 38.41190246971687 40.0 37.0 40.0 37.0 40.0 38-39 38.36604782483957 40.0 37.0 40.0 37.0 40.0 40-41 38.332784610863456 40.0 37.0 40.0 37.0 40.0 42-43 38.29672020574351 40.0 37.0 40.0 37.0 40.0 44-45 38.19817658882543 40.0 37.0 40.0 37.0 40.0 46-47 37.801221935168456 40.0 37.0 40.0 33.0 40.0 48-49 37.985831082174165 40.0 37.0 40.0 33.0 40.0 50-51 38.000515355130176 40.0 37.0 40.0 33.0 40.0 52-53 37.967120347089605 40.0 37.0 40.0 33.0 40.0 54-55 37.874115799814675 40.0 37.0 40.0 33.0 40.0 56-57 37.69823570438261 40.0 37.0 40.0 33.0 40.0 58-59 37.5292415812271 40.0 37.0 40.0 33.0 40.0 60-61 37.35018039677129 37.0 37.0 40.0 33.0 40.0 62-63 37.20276109464335 37.0 37.0 40.0 33.0 40.0 64-65 37.02650404645597 37.0 37.0 40.0 33.0 40.0 66-67 36.81928214653198 37.0 37.0 40.0 33.0 40.0 68-69 36.61721168896648 37.0 37.0 40.0 33.0 40.0 70-71 36.39480108696088 37.0 37.0 38.5 33.0 40.0 72-73 36.116964164901496 37.0 37.0 37.0 33.0 40.0 74-75 35.784297329548096 37.0 37.0 37.0 33.0 40.0 76-77 33.62799899913581 35.0 33.0 37.0 30.0 37.0 78-79 35.282131589886646 37.0 33.0 37.0 33.0 37.0 80-81 35.48514185046887 37.0 33.0 37.0 33.0 37.0 82-83 35.320651638592935 37.0 33.0 37.0 33.0 37.0 84-85 35.175608786964105 37.0 33.0 37.0 33.0 37.0 86-87 35.081182475196584 37.0 33.0 37.0 33.0 37.0 88-89 34.90976370706872 37.0 33.0 37.0 33.0 37.0 90-91 34.85291259034463 37.0 33.0 37.0 33.0 37.0 92-93 34.90134816019835 37.0 33.0 37.0 33.0 37.0 94-95 34.89092575194067 37.0 33.0 37.0 33.0 37.0 96-97 34.88899561325094 37.0 33.0 37.0 33.0 37.0 98-99 34.89742606732413 37.0 33.0 37.0 33.0 37.0 100 34.84307191416969 37.0 33.0 37.0 33.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 3.0 17 4.0 18 5.0 19 15.0 20 38.0 21 178.0 22 639.0 23 1787.0 24 4275.0 25 8699.0 26 16250.0 27 26758.0 28 40671.0 29 58628.0 30 81322.0 31 111551.0 32 150380.0 33 207652.0 34 297985.0 35 463778.0 36 918501.0 37 2580750.0 38 3075776.0 39 116654.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.60676162687558 20.217203590754366 14.641578791065651 22.53445599130441 2 14.887287151110124 20.892178451862392 42.36015430066675 21.860380096360732 3 18.013767204717887 27.055426561349893 30.889580578797926 24.04122565513429 4 12.181694954458893 17.98730406248438 39.14154791739971 30.68945306565702 5 12.764815194156153 38.02758439537111 35.434465988491475 13.773134421981267 6 28.945332422968683 38.204772504602566 18.761446685902264 14.088448386526489 7 25.471634891101147 33.720181042130406 23.455340217259867 17.352843849508577 8 24.176240051975554 36.30474698366232 21.267929537989236 18.251083426372887 9 25.800108523346182 16.67728663211186 21.893500838427997 35.62910400611396 10-11 24.03484105235469 27.02187155766377 28.59614368904871 20.34714370093283 12-13 25.160376481162892 24.935530229023144 29.082829213030763 20.8212640767832 14-15 22.15699277862769 25.931070400631 27.894598078311024 24.01733874243029 16-17 20.62344812411307 28.96308993336314 28.535391805666517 21.878070136857275 18-19 20.4472906469121 27.411982824936942 31.605605234505624 20.535121293645332 20-21 21.514233873390932 26.595358292754838 31.699289450342903 20.191118383511323 22-23 21.245931834074582 26.477004148760365 31.540742679445614 20.736321337719435 24-25 20.73056313616199 26.753902110140572 31.720831874149575 20.794702879547867 26-27 20.740152313403577 27.020008881719864 31.48169377487562 20.75814503000094 28-29 20.5999753962598 27.273264416273197 31.44413217669167 20.682628010775332 30-31 20.93956769571817 27.089234559386906 31.31529458262761 20.65590316226731 32-33 20.66087058786692 27.297714067974777 31.178471782454487 20.862943561703815 34-35 20.766471553835466 27.425546433937082 31.10650959109788 20.701472421129573 36-37 20.873370161571764 27.395364433484847 30.911830990308403 20.819434414634983 38-39 20.837279313714465 27.569614602627183 30.767828181830524 20.825277901827825 40-41 21.02455971033026 27.502966942967532 30.634207195442887 20.838266151259322 42-43 21.13709060281004 27.611752972578422 30.111530234935152 21.139626189676385 44-45 21.21761478486861 28.00028876696506 29.57617351686078 21.205922931305548 46-47 21.32910740673006 28.079359237436158 28.945572408515048 21.645960947318738 48-49 21.579375935457424 28.172340145057746 28.647218028107524 21.601065891377306 50-51 21.527174333841057 28.220132895121807 28.44746607997639 21.805226691060742 52-53 21.591223003473747 28.35821285619907 28.190054418943973 21.86050972138321 54-55 21.725626073186042 28.292786602192916 28.15430815056279 21.827279174058255 56-57 21.79256861497116 28.286228150341326 27.950418697961965 21.970784536725553 58-59 21.74160932107006 28.15575169887643 28.20242675869607 21.900212221357435 60-61 21.79348359623996 28.28590701710269 28.10655435295921 21.81405503369814 62-63 21.817264535956415 28.249842267946097 28.023111602810374 21.909781593287114 64-65 21.769389669560645 28.209527398222324 27.957603986098523 22.06347894611851 66-67 21.894579828809615 28.17758572384258 27.77966385161213 22.148170595735678 68-69 21.9063102421358 28.072800866334713 27.93191858853405 22.088970302995435 70-71 21.883196245059434 27.838328459056438 27.906959353002975 22.37151594288115 72-73 22.030150601656544 27.919528655075844 27.924276944893943 22.126043798373665 74-75 22.0007489096061 27.96487534292147 27.801935276806113 22.23244047066632 76-77 21.98552465388259 27.862724557196668 27.715687092771997 22.436063696148743 78-79 22.071773182414354 27.825222112441956 27.714386414980964 22.388618290162725 80-81 22.048072062436503 27.805797740072517 27.834471991445486 22.31165820604549 82-83 22.267709990345853 27.620159098505585 27.8514743232035 22.260656587945054 84-85 22.394594389174923 27.62170505494428 27.64565313147358 22.338047424407222 86-87 22.088750722721116 27.72753849533005 27.78770894598076 22.396001835968075 88-89 22.39295227575037 27.4240436432102 27.64481060250848 22.538193478530946 90-91 22.3989577484104 27.380222524690385 27.769769615967082 22.451050110932137 92-93 22.500912451324496 27.377836145695838 27.763466889679833 22.357784513299837 94-95 22.2867091976583 27.336595182662133 27.874121291890887 22.50257432778868 96-97 22.436565687074367 27.444147869080695 27.810371281178764 22.308915162666175 98-99 23.526828067767344 29.344606282034757 28.054035389820616 19.07453026037728 100 22.39441089434816 30.136057137642663 21.784092908961732 25.685439059047443 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3245.0 1 3174.0 2 5148.0 3 7567.0 4 10827.5 5 19010.0 6 25360.0 7 28801.5 8 30226.0 9 28212.5 10 24319.0 11 20676.0 12 22585.0 13 31610.5 14 52475.5 15 81035.5 16 103749.5 17 116247.0 18 117298.0 19 107346.0 20 91900.0 21 75122.0 22 61764.5 23 56342.0 24 57918.0 25 65933.0 26 77514.0 27 89944.5 28 103849.0 29 120374.0 30 137682.5 31 154075.0 32 173139.5 33 191195.0 34 207989.5 35 226736.0 36 247349.0 37 268206.0 38 281756.0 39 287287.0 40 293990.0 41 303303.0 42 312228.0 43 323343.0 44 335305.0 45 348037.5 46 355709.0 47 356367.0 48 353558.5 49 343824.0 50 330599.5 51 315194.0 52 294884.5 53 272237.0 54 247731.5 55 219193.0 56 190055.0 57 162435.5 58 137697.0 59 116723.0 60 94812.0 61 73969.5 62 57044.0 63 43586.5 64 32853.0 65 24090.0 66 18272.5 67 14284.0 68 10739.5 69 7876.5 70 5940.5 71 4278.0 72 3114.0 73 2379.0 74 1814.0 75 1288.0 76 771.0 77 492.0 78 338.5 79 242.0 80 173.5 81 118.5 82 90.0 83 59.0 84 36.0 85 26.5 86 23.5 87 23.5 88 19.0 89 13.0 90 9.0 91 5.0 92 2.5 93 1.5 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 3.675435070437875E-5 2 6.493268624440247E-4 3 3.675435070437875E-5 4 3.675435070437875E-5 5 3.675435070437875E-5 6 2.450290046958584E-5 7 0.0 8 0.0 9 0.0 10-11 0.001788711734279766 12-13 0.008845547069520487 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 1.2271190612882776E-5 30-31 1.2293419080750982E-5 32-33 1.2327534707557592E-5 34-35 0.006127884434159437 36-37 0.048364064407172266 38-39 0.15449031845885036 40-41 0.18098974422923655 42-43 0.05592954833110699 44-45 0.005043541937051207 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.014748337042985645 64-65 0.10088466027678827 66-67 0.22054054362441716 68-69 0.243450148735739 70-71 0.1105551294108721 72-73 0.0071293456180638185 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86-87 0.0 88-89 0.0 90-91 0.0 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 123.0 20-21 635.0 22-23 1491.0 24-25 2895.0 26-27 5559.0 28-29 11627.0 30-31 22163.0 32-33 24662.0 34-35 31751.0 36-37 45248.0 38-39 56010.0 40-41 70523.0 42-43 75456.0 44-45 93793.0 46-47 95352.0 48-49 77322.0 50-51 71573.0 52-53 59838.0 54-55 66396.0 56-57 72986.0 58-59 65715.0 60-61 34059.0 62-63 59909.0 64-65 79981.0 66-67 97067.0 68-69 89801.0 70-71 89448.0 72-73 86515.0 74-75 83100.0 76-77 79477.0 78-79 84598.0 80-81 83196.0 82-83 85596.0 84-85 92388.0 86-87 98674.0 88-89 105454.0 90-91 105010.0 92-93 107109.0 94-95 114119.0 96-97 257961.0 98-99 468311.0 100-101 4909408.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 77.07741123812289 #Duplication Level Percentage of deduplicated Percentage of total 1 86.38706101526266 66.58491027526215 2 8.148427167707826 12.561193434986183 3 2.553577918081182 5.904695259615989 4 1.1385379737583965 3.510222384543804 5 0.6005582518255487 2.3144737674202993 6 0.354885390822461 1.6412188326494876 7 0.2232248416074496 1.2043915040599569 8 0.15316668367645178 0.9444553172567488 9 0.10545915061048376 0.7315666488384658 >10 0.3295639410549663 3.8022619956925845 >50 0.0037878140932624082 0.19476706092869644 >100 0.0012468210772623015 0.17250788283501975 >500 2.5151522452848446E-4 0.129333261329406 >1k 2.515151975237951E-4 0.30400237458112755 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 3.675435070437875E-5 0.0 0.0 0.0 0.0 6 7.35087014087575E-5 0.0 0.0 0.0 0.0 7 7.35087014087575E-5 0.0 0.0 0.0 0.0 8 7.35087014087575E-5 0.0 0.0 0.0 0.0 9 7.35087014087575E-5 0.0 0.0 0.0 0.0 10-11 1.7152030328710085E-4 0.0 0.0 0.0 0.0 12-13 2.0827465399147962E-4 0.0 0.0 0.0 0.0 14-15 2.4502900469585835E-4 0.0 0.0 0.0 0.0 16-17 3.1241198098721937E-4 0.0 0.0 0.0 0.0 18-19 3.4916633169159816E-4 0.0 0.0 1.8377175352189377E-5 0.0 20-21 3.6754350704378756E-4 0.0 0.0 2.4502900469585835E-5 0.0 22-23 4.533036586873379E-4 0.0 0.0 3.675435070437875E-5 0.0 24-25 5.819438861526636E-4 0.0 0.0 7.963442652615397E-5 0.0 26-27 6.615783126788176E-4 0.0 0.0 2.0214892887408315E-4 0.0 28-29 6.738297629136105E-4 0.0 0.0 7.718413647919539E-4 0.0 30-31 7.105841136179893E-4 0.0 0.0 0.001960232037566867 0.0 32-33 7.963442652615397E-4 0.0 0.0 0.003975595601190302 0.0 34-35 8.759786917876937E-4 0.0 0.0 0.006517771524909833 0.0 36-37 9.556131183138476E-4 0.0 0.0 0.009801160187834335 0.0 38-39 9.678645685486405E-4 0.0 0.0 0.016153537134574462 0.0 40-41 0.001016870369487812 0.0 0.0 0.02292246338929755 0.0 42-43 0.001016870369487812 0.0 0.0 0.028797033776880754 0.0 44-45 0.0010720018955443803 0.0 0.0 0.03486762736822065 0.0 46-47 0.001133259146718345 0.0 0.0 0.04103623256143887 0.0 48-49 0.0011700134974227238 0.0 0.0 0.0477622787403402 0.0 50-51 0.00117613922254012 0.0 0.0 0.054659845222528605 0.0 52-53 0.0012435221988314812 0.0 0.0 0.061980086737817366 0.0 54-55 0.0012496479239488777 0.0 0.0 0.06845497818690544 0.0 56-57 0.0012496479239488777 0.0 0.0 0.07348419850828791 0.0 58-59 0.0012496479239488777 0.0 0.0 0.07878295073483585 0.0 60-61 0.0012741508244184636 6.125725117396459E-6 0.0 0.08242163145456935 0.0 62-63 0.0012741508244184636 1.2251450234792918E-5 0.0 0.08527621935927611 0.0 64-65 0.0012741508244184636 1.2251450234792918E-5 0.0 0.08941108381351871 0.0 66-67 0.0012802765495358599 1.2251450234792918E-5 0.0 0.09536528862762808 0.0 68-69 0.001359910976062014 1.2251450234792918E-5 0.0 0.10192594022835968 0.0 70-71 0.001372162426296807 1.2251450234792918E-5 0.0 0.10761061313730359 0.0 72-73 0.0013844138765315998 1.2251450234792918E-5 0.0 0.11224166132605531 0.0 74-75 0.0013844138765315998 1.2251450234792918E-5 0.0 0.11571494746761911 0.0 76-77 0.0014089167770011855 1.2251450234792918E-5 0.0 0.11893095315425226 0.0 78-79 0.0014334196774707713 1.2251450234792918E-5 0.0 0.12107495694534101 0.0 80-81 0.0014334196774707713 1.2251450234792918E-5 0.0 0.12174878670825462 0.0 82-83 0.0014579225779403572 1.2251450234792918E-5 0.0 0.12228785051858551 0.0 84-85 0.001482425478409943 1.2251450234792918E-5 0.0 0.12256963387398576 0.0 86-87 0.001482425478409943 1.2251450234792918E-5 0.0 0.12275953135262505 0.0 88 0.001482425478409943 1.2251450234792918E-5 0.0 0.12279628570332941 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 21680 0.0 48.357204 1 GTATCAA 39295 0.0 35.873566 1 TATCAAC 49260 0.0 28.438923 2 ATCAACG 49320 0.0 28.361908 3 AACGCAG 49575 0.0 28.271475 6 TCAACGC 49755 0.0 28.130693 4 CAACGCA 49745 0.0 28.087296 5 ACGCAGA 54850 0.0 25.485748 7 CGCAGAG 55260 0.0 25.289112 8 GCAGAGT 61105 0.0 22.911007 9 GTACATG 33955 0.0 21.451 1 GAGTACT 42590 0.0 21.218508 12-13 TACATGG 34490 0.0 20.731653 2 ACATGGG 33715 0.0 20.713715 3 ACGGTAC 745 0.0 20.69439 3 CAGAGTA 60225 0.0 20.225006 10-11 GTACTTT 46775 0.0 19.250889 14-15 GTGGTAT 10260 0.0 19.087996 1 AGAGTAC 58475 0.0 19.076906 10-11 AGTACTT 44740 0.0 18.638638 12-13 >>END_MODULE