##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138752_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 9303175 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.269396308249604 33.0 33.0 34.0 31.0 34.0 2 32.03520282054245 33.0 32.0 33.0 30.0 34.0 3 32.07104112305745 33.0 33.0 33.0 29.0 34.0 4 32.495469987396774 33.0 33.0 34.0 31.0 34.0 5 32.808006621395386 33.0 33.0 34.0 31.0 34.0 6 36.83244064526358 38.0 37.0 38.0 35.0 38.0 7 37.10373275790254 38.0 38.0 38.0 36.0 38.0 8 37.1454234710193 38.0 38.0 38.0 36.0 38.0 9 37.23301829751671 38.0 38.0 38.0 36.0 38.0 10-11 37.27631550519043 38.0 38.0 38.0 37.0 38.0 12-13 37.30996815603275 38.0 38.0 38.0 37.0 38.0 14-15 37.334605121369854 38.0 38.0 38.0 37.0 38.0 16-17 37.33053495177721 38.0 38.0 38.0 37.0 38.0 18-19 37.20335670349101 38.0 38.0 38.0 36.5 38.0 20-21 37.321388715334734 38.0 38.0 38.0 37.0 38.0 22-23 37.34138535275976 38.0 38.0 38.0 37.0 38.0 24-25 37.346257083623385 38.0 38.0 38.0 37.0 38.0 26-27 37.31565524882052 38.0 38.0 38.0 37.0 38.0 28-29 37.2954187083194 38.0 38.0 38.0 37.0 38.0 30-31 37.29767115361993 38.0 38.0 38.0 37.0 38.0 32-33 37.283200089714555 38.0 38.0 38.0 37.0 38.0 34-35 37.26814661361514 38.0 38.0 38.0 37.0 38.0 36-37 37.24584335364031 38.0 38.0 38.0 37.0 38.0 38-39 37.208453778822346 38.0 38.0 38.0 37.0 38.0 40-41 37.21048864762732 38.0 38.0 38.0 37.0 38.0 42-43 37.18629355640829 38.0 38.0 38.0 36.5 38.0 44-45 37.158259191416334 38.0 38.0 38.0 36.0 38.0 46-47 37.1249578340109 38.0 38.0 38.0 36.0 38.0 48-49 37.094425182756844 38.0 38.0 38.0 36.0 38.0 50-51 37.071181171548545 38.0 38.0 38.0 36.0 38.0 52-53 37.050597366474896 38.0 38.0 38.0 36.0 38.0 54-55 37.03428979085653 38.0 38.0 38.0 36.0 38.0 56-57 37.02005329944889 38.0 38.0 38.0 36.0 38.0 58-59 37.0086944202199 38.0 38.0 38.0 36.0 38.0 60-61 37.0042684402373 38.0 38.0 38.0 36.0 38.0 62-63 36.998314777535015 38.0 38.0 38.0 36.0 38.0 64-65 37.00184829771191 38.0 38.0 38.0 36.0 38.0 66-67 36.99153954087683 38.0 38.0 38.0 36.0 38.0 68-69 36.992779349294445 38.0 38.0 38.0 36.0 38.0 70-71 36.981149058440124 38.0 38.0 38.0 36.0 38.0 72-73 36.95231936819411 38.0 38.0 38.0 36.0 38.0 74-75 36.970027958744794 38.0 38.0 38.0 36.0 38.0 76-77 36.95635432828082 38.0 38.0 38.0 36.0 38.0 78-79 36.94254067799737 38.0 38.0 38.0 36.0 38.0 80-81 36.92052884160037 38.0 38.0 38.0 35.5 38.0 82-83 36.90677348114336 38.0 38.0 38.0 35.0 38.0 84-85 36.889219577885555 38.0 38.0 38.0 35.0 38.0 86-87 36.852682222965406 38.0 38.0 38.0 35.0 38.0 88-89 36.83661646991581 38.0 38.0 38.0 35.0 38.0 90-91 36.84283329992327 38.0 38.0 38.0 35.0 38.0 92-93 36.81079930763163 38.0 38.0 38.0 35.0 38.0 94-95 36.74866118535142 38.0 38.0 38.0 35.0 38.0 96-97 36.76124263760401 38.0 38.0 38.0 35.0 38.0 98-99 36.79439445804701 38.0 38.0 38.0 35.0 38.0 100 35.209903663771826 38.0 35.0 38.0 29.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 4.0 18 21.0 19 31.0 20 93.0 21 239.0 22 739.0 23 2149.0 24 5028.0 25 10053.0 26 17306.0 27 28453.0 28 42555.0 29 60870.0 30 83458.0 31 110496.0 32 143281.0 33 189664.0 34 269682.0 35 446796.0 36 1086463.0 37 6805794.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.642568262985485 19.37356870100799 13.743060836757342 25.24080219924918 2 14.770763744635568 20.01230762615989 42.19289651113733 23.02403211806722 3 18.42234505961674 25.24255428926146 29.771191018120156 26.563909633001636 4 12.679144485619156 17.462844673995708 38.750770570262304 31.107240270122833 5 13.897538988332336 36.796059302661945 35.2515538736578 14.054847835347923 6 30.46280913205256 37.25154635895134 18.636377121540846 13.649267387455252 7 26.90281832845435 32.18142539309702 22.779859862881207 18.13589641556742 8 24.345559446103078 36.52097267868228 21.091208109059544 18.0422597661551 9 25.62343501009064 16.785086811760504 21.094497308714498 36.49698086943436 10-11 24.458800355792512 26.431642960602158 28.634627425583204 20.474929258022126 12-13 25.234162018253127 23.921459493286914 28.748914080291303 22.095464408168652 14-15 22.429269838444384 25.19401980442374 26.401011095783012 25.97569926134887 16-17 22.103115334281036 28.328807100801605 27.08933777984398 22.478739785073376 18-19 22.082880306991967 27.337946453764438 28.820585445291524 21.758587793952064 20-21 22.82956630184315 26.605505277470144 28.733896253449277 21.83103216723743 22-23 22.572747265670497 26.55847684741487 28.605538849056238 22.263237037858392 24-25 22.367922568870934 26.6914193370553 28.708159587318367 22.232498506755398 26-27 22.331216511959333 26.84042772227834 28.62209497043027 22.20626079533206 28-29 22.255556093285367 26.83592787967758 28.646899718767312 22.261616308269748 30-31 22.558060011876186 26.73651021148632 28.541025422724548 22.164404353912946 32-33 22.34406855481581 26.84506194583019 28.550409243458375 22.260460255895627 34-35 22.48052817285539 26.846906458664595 28.554168035734133 22.118397332745886 36-37 22.43937639333455 26.783229673580212 28.502929797624933 22.27446413546031 38-39 22.23675159539328 26.84413024674962 28.66094845023803 22.258169707619064 40-41 22.498535364309433 26.7296205270541 28.514931176092322 22.256912932544147 42-43 22.396986797156963 26.77953781895926 28.400535306377623 22.42294007750616 44-45 22.457681022631675 26.918995446602807 28.27668528655459 22.346638244210933 46-47 22.534354948715432 26.872021403088898 28.019494462008872 22.574129186186802 48-49 22.45464273444584 26.9552538058201 28.03018748908801 22.559915970646045 50-51 22.40569101494229 27.106825371883808 27.961770974144695 22.52571263902921 52-53 22.56859692041232 27.0742421155905 27.85499254584851 22.502168418148667 54-55 22.577963421412857 26.954312652672485 27.840622584514378 22.62710134140028 56-57 22.561589956217396 27.08976756261438 27.770608516827423 22.578033964340804 58-59 22.50537129796576 27.14241702813357 27.902068695730424 22.45014297817024 60-61 22.56138662831704 27.19181831881265 27.832578708793935 22.414216344076372 62-63 22.50634070179703 27.322593772746266 27.76246387370877 22.408601651747937 64-65 22.48845752874401 27.2560444628484 27.740382565807813 22.515115442599775 66-67 22.518088108378702 27.320556188664902 27.56578535200218 22.595570350954215 68-69 22.48066666743513 27.259584855021767 27.694704278531763 22.565044199011336 70-71 22.52326140427832 27.00868786601 27.731070466668186 22.736980263043492 72-73 22.60860841630389 26.976483165933452 27.6556883199856 22.759220097777057 74-75 22.493438482174618 27.103184079099613 27.64573918497244 22.757638253753328 76-77 22.68675002099954 27.034100734405392 27.508595978450202 22.770553266144873 78-79 22.586072855733143 27.091190018762784 27.471774934916475 22.850962190587598 80-81 22.657757982599417 27.109912141570902 27.444311172639125 22.788018703190556 82-83 22.683129004893324 27.10827097045944 27.52030117450483 22.68829885014241 84-85 22.785920504903494 27.110505084108528 27.414072100883153 22.68950231010483 86-87 22.681065998311126 27.146763407323636 27.469102132357186 22.70306846200805 88-89 22.733703111794625 27.119770052807052 27.41096378236057 22.73556305303775 90-91 22.731248658222412 27.192571919278663 27.37926685272649 22.696912569772433 92-93 22.82940160422408 27.161653664053492 27.39846543640465 22.610479295317774 94-95 22.70903166446444 27.24938772595184 27.416490763626783 22.625089845956936 96-97 22.7809821111984 27.317145578552903 27.465616374545483 22.436255935703212 98-99 23.875036486166604 29.1784318815015 27.719255833295186 19.227275799036715 100 22.738971380205612 30.071856712002575 21.62666210080289 25.56250980698892 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1842.0 1 1751.0 2 2387.0 3 3310.0 4 4091.0 5 5688.5 6 7277.0 7 9305.0 8 11847.5 9 13133.0 10 12766.0 11 12371.0 12 13420.5 13 16291.0 14 21585.5 15 27428.0 16 31633.5 17 33849.5 18 33549.5 19 31052.5 20 27957.0 21 25882.0 22 26528.0 23 30399.0 24 37582.0 25 48901.0 26 63645.5 27 80040.0 28 97479.0 29 116776.0 30 134925.5 31 153005.0 32 172938.5 33 193027.5 34 213417.5 35 233381.0 36 255110.5 37 276193.5 38 292416.0 39 304995.5 40 319679.0 41 333984.0 42 344792.5 43 356397.5 44 369527.5 45 384515.5 46 391816.0 47 394368.5 48 396298.0 49 393471.0 50 387616.0 51 377305.0 52 364717.5 53 349353.5 54 331827.5 55 311496.0 56 288481.0 57 264030.5 58 237036.0 59 207925.5 60 175386.5 61 142809.5 62 113909.5 63 88629.5 64 67244.5 65 50971.0 66 38718.5 67 29219.0 68 22030.0 69 16555.0 70 12349.5 71 8871.0 72 6491.5 73 4660.5 74 3179.0 75 2071.0 76 1331.0 77 793.5 78 452.5 79 248.5 80 168.0 81 122.5 82 80.5 83 57.5 84 41.5 85 24.5 86 15.5 87 13.5 88 8.0 89 3.0 90 3.0 91 2.5 92 1.5 93 1.5 94 1.5 95 1.0 96 0.5 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0049015524269940105 6 3.332195728877507E-4 7 1.0749018480250023E-5 8 0.0 9 0.0 10-11 0.0 12-13 1.0749018480250023E-5 14-15 1.0749018480250023E-5 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 3.773666075081615E-5 34-35 1.512928705233993E-4 36-37 1.40959716640609E-4 38-39 1.3076418754657453E-4 40-41 9.861012318376587E-5 42-43 1.873084014098373E-4 44-45 1.5527332041681126E-4 46-47 2.235449126319418E-5 48-49 2.9286284241861454E-4 50-51 3.6871995464177296E-4 52-53 4.0536351887049963E-4 54-55 0.0022295740703293853 56-57 0.003587234098442151 58-59 0.0022438187020132417 60-61 0.003705547015962921 62-63 0.002100407650666826 64-65 0.0027664794980318346 66-67 6.914251794082999E-4 68-69 6.855475771838604E-4 70-71 3.1838834757427266E-4 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86-87 0.0 88-89 6.642646855636685E-6 90-91 0.0 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 79.0 20-21 331.0 22-23 723.0 24-25 843.0 26-27 1880.0 28-29 4914.0 30-31 15106.0 32-33 19725.0 34-35 27086.0 36-37 43397.0 38-39 49861.0 40-41 50092.0 42-43 56399.0 44-45 68207.0 46-47 70035.0 48-49 65075.0 50-51 58318.0 52-53 55201.0 54-55 59582.0 56-57 61164.0 58-59 64297.0 60-61 64362.0 62-63 63955.0 64-65 68118.0 66-67 73729.0 68-69 75097.0 70-71 79334.0 72-73 67960.0 74-75 68183.0 76-77 70833.0 78-79 72976.0 80-81 71811.0 82-83 69158.0 84-85 68604.0 86-87 71233.0 88-89 73994.0 90-91 74278.0 92-93 74821.0 94-95 89228.0 96-97 294934.0 98-99 648095.0 100-101 6290157.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 83.99892746311775 #Duplication Level Percentage of deduplicated Percentage of total 1 89.14864411759183 74.88390490668897 2 7.4331268030587 12.487493583085682 3 1.8949529520426718 4.775220466939597 4 0.7028805783135024 2.361648588519606 5 0.3061374163431533 1.2857607314577404 6 0.1742384675275183 0.8781506637077284 7 0.096730374885069 0.5687673420415769 8 0.05961205364234847 0.4005878855864891 9 0.04006564158323813 0.30289238290023246 >10 0.1403851678339522 1.7810364558186829 >50 0.002538509905079262 0.13728388137941697 >100 6.2301228683358E-4 0.07682734155558185 >500 2.1634996087432504E-5 0.01650123352047876 >1k 4.326998999971697E-5 0.043924536798327495 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 9.67411663222502E-5 0.0 0.0 0.0 3 0.0 9.67411663222502E-5 0.0 0.0 0.0 4 0.0 1.3973724024325028E-4 0.0 2.1498036960500046E-5 0.0 5 0.0 1.504862587235003E-4 0.0 3.2247055440750066E-5 0.0 6 0.0 1.504862587235003E-4 0.0 5.374509240125011E-5 0.0 7 0.0 1.504862587235003E-4 0.0 6.449411088150013E-5 0.0 8 0.0 1.504862587235003E-4 0.0 7.524312936175015E-5 0.0 9 0.0 2.6872546200625057E-4 0.0 1.0749018480250022E-4 0.0 10-11 0.0 2.6872546200625057E-4 0.0 1.6660978644387534E-4 0.0 12-13 0.0 2.6872546200625057E-4 0.0 1.7735880492412536E-4 0.0 14-15 5.3745092401250115E-6 3.009725174470006E-4 0.0 1.934823326445004E-4 1.0749018480250023E-5 16-17 1.0749018480250023E-5 3.063470266871256E-4 0.0 2.1498036960500045E-4 2.1498036960500046E-5 18-19 1.0749018480250023E-5 3.385940821278757E-4 0.0 2.4722742504575053E-4 2.1498036960500046E-5 20-21 1.0749018480250023E-5 3.654666283285008E-4 0.0 2.4722742504575053E-4 2.1498036960500046E-5 22-23 2.1498036960500046E-5 3.923391745291258E-4 0.0 2.633509527661255E-4 2.1498036960500046E-5 24-25 3.224705544075007E-5 4.51458776170501E-4 0.0 2.7947448048650056E-4 3.2247055440750066E-5 26-27 4.299607392100009E-5 4.944548500915011E-4 0.0 3.0097251744700066E-4 3.2247055440750066E-5 28-29 4.299607392100009E-5 4.998293593316261E-4 0.0 5.320764147723761E-4 3.2247055440750066E-5 30-31 6.986862012162514E-5 5.750724886933762E-4 0.0 0.0014994880779948781 3.2247055440750066E-5 32-33 7.524312936175015E-5 5.804469979335012E-4 0.0 0.003402064348999132 4.299607392100009E-5 34-35 8.599214784200018E-5 6.718136550156264E-4 0.0 0.0062183071908246375 4.299607392100009E-5 36-37 9.67411663222502E-5 7.846783490582516E-4 0.0 0.010856508665052523 4.299607392100009E-5 38-39 9.67411663222502E-5 8.061763860187517E-4 0.0 0.023169509334178925 4.299607392100009E-5 40-41 9.67411663222502E-5 8.599214784200018E-4 0.0 0.03647679421272845 4.299607392100009E-5 42-43 9.67411663222502E-5 8.760450061403768E-4 0.0 0.04468904433163947 4.299607392100009E-5 44-45 9.67411663222502E-5 9.727861724626271E-4 0.0 0.05435241194538423 4.83705831611251E-5 46-47 9.67411663222502E-5 0.0010480293018243771 0.0 0.06494019514843051 5.374509240125011E-5 48-49 9.67411663222502E-5 0.0010587783203046272 0.0 0.07557634893463791 5.374509240125011E-5 50-51 9.67411663222502E-5 0.0011662685051071274 0.0 0.08612113606376318 5.374509240125011E-5 52-53 9.67411663222502E-5 0.0011716430143472523 0.0 0.11700844066676161 5.911960164137512E-5 54-55 9.67411663222502E-5 0.0012038900697880024 0.0 0.1558607679636253 6.449411088150013E-5 56-57 1.0749018480250022E-4 0.0012361371252287525 0.0 0.20913290355174444 6.449411088150013E-5 58-59 1.0749018480250022E-4 0.0012468861437090026 0.0 0.2439650979369946 6.449411088150013E-5 60-61 1.0749018480250022E-4 0.0012898822176300026 0.0 0.2582290454602864 6.449411088150013E-5 62-63 1.0749018480250022E-4 0.0013113802545905028 0.0 0.2702142010657652 6.449411088150013E-5 64-65 1.0749018480250022E-4 0.0014941135687547532 0.0 0.2770505768192042 6.449411088150013E-5 66-67 1.0749018480250022E-4 0.0015317351334356282 0.0 0.2835429839812752 6.986862012162514E-5 68-69 1.1823920328275024E-4 0.0015908547350770032 0.0 0.28985265782918196 7.524312936175015E-5 70-71 1.1823920328275024E-4 0.0016123527720375034 0.0 0.29493156906110013 7.524312936175015E-5 72-73 1.1823920328275024E-4 0.0016231017905177533 0.0 0.29876359414930925 8.599214784200018E-5 74-75 1.1823920328275024E-4 0.0016660978644387535 0.0 0.30163358208353597 8.599214784200018E-5 76-77 1.1823920328275024E-4 0.0017682135400011287 0.0 0.3046164347118054 8.599214784200018E-5 78-79 1.1823920328275024E-4 0.0018112096139221287 0.0 0.30658350509369114 8.599214784200018E-5 80-81 1.2898822176300026E-4 0.0018219586324023788 0.0 0.3072284462025061 8.599214784200018E-5 82-83 1.2898822176300026E-4 0.0018327076508826289 0.0 0.3076207853770353 9.67411663222502E-5 84-85 1.2898822176300026E-4 0.0018595801970832538 0.0 0.30780889320043964 9.67411663222502E-5 86-87 1.2898822176300026E-4 0.0018810782340437538 0.0 0.3079056343667619 9.67411663222502E-5 88 1.2898822176300026E-4 0.001945572344925254 0.0 0.30791638338524213 9.67411663222502E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 10975 0.0 47.063457 1 GTATCAA 20430 0.0 39.147778 1 TCAACGC 23945 0.0 32.698856 4 ATCAACG 23935 0.0 32.658474 3 CAACGCA 24570 0.0 31.831982 5 TATCAAC 25300 0.0 31.186174 2 AACGCAG 25410 0.0 30.913765 6 ACGCAGA 29490 0.0 26.5634 7 CGCAGAG 30275 0.0 25.903118 8 GTGGTAT 5510 0.0 22.144526 1 GCAGAGT 35475 0.0 22.08188 9 GTACATG 24885 0.0 20.929594 1 TACATGG 24875 0.0 20.522022 2 GAGTACT 21450 0.0 19.70715 12-13 TGGTATC 5760 0.0 19.686333 2 ACATGGG 25115 0.0 19.673563 3 AGAGTAC 31865 0.0 18.873995 10-11 CAGAGTA 34380 0.0 18.759844 10-11 CATGGGG 19470 0.0 17.582722 4 GTACTTT 24115 0.0 17.57439 14-15 >>END_MODULE