##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138751_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7867008 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.249039278973655 33.0 33.0 34.0 31.0 34.0 2 32.02729411232326 33.0 32.0 33.0 30.0 34.0 3 32.06045665645694 33.0 33.0 33.0 29.0 34.0 4 32.47807514623094 33.0 33.0 34.0 31.0 34.0 5 32.80214854236833 33.0 33.0 34.0 31.0 34.0 6 36.802147525463305 38.0 37.0 38.0 35.0 38.0 7 37.0946005139438 38.0 38.0 38.0 36.0 38.0 8 37.13454200122842 38.0 38.0 38.0 36.0 38.0 9 37.222984773880995 38.0 38.0 38.0 36.0 38.0 10-11 37.268684485893495 38.0 38.0 38.0 36.5 38.0 12-13 37.304188136074096 38.0 38.0 38.0 37.0 38.0 14-15 37.33121626417566 38.0 38.0 38.0 37.0 38.0 16-17 37.32689619738534 38.0 38.0 38.0 37.0 38.0 18-19 37.19953774039635 38.0 38.0 38.0 36.5 38.0 20-21 37.31603999116959 38.0 38.0 38.0 37.0 38.0 22-23 37.33788558828765 38.0 38.0 38.0 37.0 38.0 24-25 37.34359419069058 38.0 38.0 38.0 37.0 38.0 26-27 37.31412909490329 38.0 38.0 38.0 37.0 38.0 28-29 37.29102759741495 38.0 38.0 38.0 37.0 38.0 30-31 37.294145960416486 38.0 38.0 38.0 37.0 38.0 32-33 37.27870724957166 38.0 38.0 38.0 37.0 38.0 34-35 37.26563957296871 38.0 38.0 38.0 37.0 38.0 36-37 37.24176517614471 38.0 38.0 38.0 37.0 38.0 38-39 37.20383198643904 38.0 38.0 38.0 37.0 38.0 40-41 37.20544352998017 38.0 38.0 38.0 37.0 38.0 42-43 37.17871007041635 38.0 38.0 38.0 36.5 38.0 44-45 37.14861768672412 38.0 38.0 38.0 36.0 38.0 46-47 37.112178164725464 38.0 38.0 38.0 36.0 38.0 48-49 37.0803609510297 38.0 38.0 38.0 36.0 38.0 50-51 37.05528803911244 38.0 38.0 38.0 36.0 38.0 52-53 37.03525406602858 38.0 38.0 38.0 36.0 38.0 54-55 37.0182642891516 38.0 38.0 38.0 36.0 38.0 56-57 37.004905213425374 38.0 38.0 38.0 36.0 38.0 58-59 36.99424202241653 38.0 38.0 38.0 36.0 38.0 60-61 36.99024163878576 38.0 38.0 38.0 36.0 38.0 62-63 36.98393144895637 38.0 38.0 38.0 36.0 38.0 64-65 36.98658721260844 38.0 38.0 38.0 36.0 38.0 66-67 36.97586599326095 38.0 38.0 38.0 36.0 38.0 68-69 36.97614268053428 38.0 38.0 38.0 36.0 38.0 70-71 36.96626793972782 38.0 38.0 38.0 36.0 38.0 72-73 36.935796862342734 38.0 38.0 38.0 36.0 38.0 74-75 36.95498268701227 38.0 38.0 38.0 36.0 38.0 76-77 36.941353211120614 38.0 38.0 38.0 36.0 38.0 78-79 36.92865690717407 38.0 38.0 38.0 36.0 38.0 80-81 36.903072373754796 38.0 38.0 38.0 35.5 38.0 82-83 36.89151636700714 38.0 38.0 38.0 35.0 38.0 84-85 36.87356867781117 38.0 38.0 38.0 35.0 38.0 86-87 36.83796381782563 38.0 38.0 38.0 35.0 38.0 88-89 36.81780562764003 38.0 38.0 38.0 35.0 38.0 90-91 36.82716012899637 38.0 38.0 38.0 35.0 38.0 92-93 36.794062981449414 38.0 38.0 38.0 35.0 38.0 94-95 36.73370886742008 38.0 38.0 38.0 35.0 38.0 96-97 36.750096861907494 38.0 38.0 38.0 35.0 38.0 98-99 36.779939636700135 38.0 38.0 38.0 35.0 38.0 100 35.194352502828416 38.0 35.0 38.0 29.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 8.0 18 17.0 19 36.0 20 95.0 21 209.0 22 744.0 23 1966.0 24 4511.0 25 8892.0 26 15589.0 27 24292.0 28 36923.0 29 52996.0 30 71992.0 31 93984.0 32 122357.0 33 161664.0 34 229331.0 35 379751.0 36 919389.0 37 5742261.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.534087673484 19.512081340199476 13.788939835830853 25.164891150485673 2 14.756957155757307 20.063472669660435 42.227947397536646 22.951622777045603 3 18.297896735328095 25.396961589463235 29.940111920567514 26.365029754641157 4 12.662781072550072 17.58710554253917 38.73883184051675 31.011281544394002 5 13.764710608214322 36.87899807311975 35.310938572969626 14.045352745696299 6 30.30028657738638 37.393296161108736 18.602145548771226 13.704271712733659 7 26.731916377865637 32.34495249019704 22.845775674818178 18.077355457119147 8 24.362896287889882 36.59279360082003 21.028833325198093 18.015476786091995 9 25.550539671499 16.785720822960904 21.15187883373196 36.51186067180814 10-11 24.39832907250126 26.484624141732155 28.671236892094175 20.445809893672408 12-13 25.20607105052334 23.98788230467557 28.755730816323744 22.050315828477345 14-15 22.41643486525435 25.225711633407727 26.430610777389674 25.927242723948257 16-17 22.043202447487023 28.370582564553132 27.123475659361223 22.462739328598623 18-19 22.03253765599323 27.37857899725029 28.837310194676295 21.75157315208018 20-21 22.76721918459814 26.612364422350165 28.825334369574573 21.795082023477118 22-23 22.505867608348474 26.581552923265804 28.67177279634012 22.2408066720456 24-25 22.275213175811054 26.697854816695244 28.8053496856267 22.221582321866997 26-27 22.203658534181947 26.829411722447688 28.75103951884955 22.215890224520813 28-29 22.093518623271923 26.798556747539752 28.80246637770838 22.305458251479944 30-31 22.343638131046315 26.689368582467267 28.744239261041884 22.222754025444537 32-33 22.149033712748075 26.81421939440031 28.747603632608605 22.289143260243012 34-35 22.32326693651783 26.900590363861944 28.7454630532736 22.030679646346623 36-37 22.30754871045463 26.79238049872164 28.601339670968564 22.29873111985517 38-39 22.16870605522156 26.87883414576517 28.748756151406933 22.203703647606343 40-41 22.447868900484742 26.706477264404633 28.63325229488317 22.212401540227454 42-43 22.37244507509535 26.80600522894427 28.470883197212345 22.350666498748044 44-45 22.34314483319505 26.969030291885197 28.3643689336063 22.32345594131345 46-47 22.487869283307973 26.860292407363453 28.08079982154212 22.571038487786456 48-49 22.44265770722586 26.945606259303208 28.043699679664957 22.56803635380598 50-51 22.351733344942172 27.15682575614664 27.980737655798965 22.510703243112225 52-53 22.517028165096047 27.103363145035996 27.937884759901298 22.441723929966656 54-55 22.502039581465148 26.992400929045445 27.90577116607542 22.599788323413986 56-57 22.530501179881032 27.155014775605864 27.788523506670625 22.52596053784248 58-59 22.427082678218348 27.233734200354263 27.961279853374034 22.377903268053355 60-61 22.548409812567428 27.319574666422486 27.79055065201798 22.341464868992105 62-63 22.450245350583277 27.45518381565161 27.753696266284507 22.340874567480608 64-65 22.47274449810836 27.36430240612957 27.74788879235816 22.41506430340391 66-67 22.483106834815025 27.406508686852998 27.58913132612132 22.52125315221066 68-69 22.42128049633683 27.313887018351952 27.733197914944935 22.531634570366286 70-71 22.495892042476118 27.07639655095268 27.741018060462004 22.686693346109198 72-73 22.599428590410326 26.99270201951165 27.687532905731526 22.720336484346497 74-75 22.474064256152857 27.160437269784367 27.669122547177295 22.69637592688548 76-77 22.62066223638107 27.059167025835556 27.570237616862634 22.74993312092074 78-79 22.53361695318008 27.117796340217005 27.548698725371345 22.799887981231574 80-81 22.59399618477074 27.159749979099384 27.485791963387456 22.760461872742418 82-83 22.6539389258322 27.12024528331936 27.595050479163714 22.630765311684726 84-85 22.74465512391202 27.15177718920629 27.4340114622102 22.669556224671496 86-87 22.575597981127935 27.1723800119126 27.555824634001063 22.696197372958398 88-89 22.63688714509722 27.14497534280052 27.504248553307654 22.713888958794612 90-91 22.672365183032912 27.162209364192712 27.49310024399485 22.67232520877953 92-93 22.733002522159875 27.137173654217317 27.4973748874043 22.63244893621851 94-95 22.597312103373255 27.225131061047836 27.52399581101081 22.6535610245681 96-97 22.692977557553 27.344678723475702 27.52577546110599 22.436568257865304 98-99 23.77811905265052 29.210740242413145 27.761719688247826 19.24942101668851 100 22.672954221608816 30.073555821298115 21.65172907760909 25.601760879483983 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2122.0 1 1954.5 2 2258.0 3 2986.5 4 3766.0 5 5162.0 6 6527.5 7 8240.5 8 10354.5 9 11505.0 10 11239.0 11 10966.0 12 12087.5 13 14494.0 14 18959.0 15 24271.5 16 28462.5 17 30708.0 18 30200.0 19 27707.0 20 24754.0 21 22792.0 22 23236.0 23 26640.0 24 33174.5 25 42815.5 26 55639.5 27 70326.5 28 85066.0 29 100647.0 30 116473.5 31 132543.0 32 150241.5 33 167641.5 34 184331.0 35 201316.0 36 220195.0 37 236972.0 38 249370.0 39 259860.5 40 272145.5 41 284014.0 42 292666.5 43 306329.5 44 317692.5 45 324428.0 46 327800.5 47 326968.5 48 327160.5 49 325805.5 50 322942.5 51 317251.5 52 306941.0 53 293515.5 54 279051.5 55 261959.5 56 242653.5 57 221465.5 58 198345.5 59 174137.0 60 147485.0 61 120807.0 62 96191.0 63 74760.0 64 57252.0 65 43364.0 66 32738.5 67 24891.0 68 18753.5 69 14150.0 70 10577.5 71 7732.0 72 5731.0 73 4084.0 74 2785.0 75 1834.0 76 1179.5 77 730.0 78 463.5 79 283.5 80 174.0 81 107.5 82 68.5 83 46.5 84 32.5 85 24.0 86 17.5 87 13.0 88 9.0 89 6.5 90 5.0 91 2.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.005160793023217976 6 2.9236019589658484E-4 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 6.3556564325344536E-6 14-15 1.2711312865068907E-5 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 4.463100772416099E-5 34-35 1.469868244205955E-4 36-37 1.3466847507190334E-4 38-39 1.546852519278133E-4 40-41 1.166641216604571E-4 42-43 1.6948279717015876E-4 44-45 1.837626532071899E-4 46-47 3.969257308295787E-5 48-49 3.4008558820636524E-4 50-51 3.4262084388320016E-4 52-53 4.66675765716862E-4 54-55 0.0019951104133596404 56-57 0.003168746448020418 58-59 0.001997268924796882 60-61 0.00329479376611088 62-63 0.0020149430139714186 64-65 0.0026252963365157207 66-67 7.209487800154712E-4 68-69 6.916895944955342E-4 70-71 3.710516826975545E-4 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86-87 0.0 88-89 7.91385484106724E-6 90-91 0.0 92-93 8.077890248936344E-6 94-95 2.4495096857287238E-5 96-97 0.0 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 66.0 20-21 289.0 22-23 685.0 24-25 811.0 26-27 1874.0 28-29 4392.0 30-31 12955.0 32-33 16958.0 34-35 23448.0 36-37 37126.0 38-39 43331.0 40-41 43090.0 42-43 49207.0 44-45 59225.0 46-47 61042.0 48-49 56733.0 50-51 51073.0 52-53 48870.0 54-55 52392.0 56-57 54648.0 58-59 56365.0 60-61 57026.0 62-63 55384.0 64-65 59239.0 66-67 64393.0 68-69 66300.0 70-71 71545.0 72-73 59115.0 74-75 58732.0 76-77 61067.0 78-79 62971.0 80-81 62921.0 82-83 59473.0 84-85 59480.0 86-87 60995.0 88-89 63489.0 90-91 64511.0 92-93 64422.0 94-95 76391.0 96-97 247424.0 98-99 544276.0 100-101 5273274.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 85.08261757822693 #Duplication Level Percentage of deduplicated Percentage of total 1 89.74699722116848 76.35909443362874 2 7.141158481876363 12.151769123579962 3 1.738472288989905 4.437413188034186 4 0.6416705307348707 2.1838003351093165 5 0.28784824591557995 1.2245441113899354 6 0.15316912508940014 0.7819218056863821 7 0.08570335053807704 0.5104305779302757 8 0.051336770785800394 0.34942934691754773 9 0.034711848875098046 0.2658037466945856 >10 0.11623793574262267 1.501531514535216 >50 0.002184118975165233 0.12194335757351 >100 4.3818165451740674E-4 0.05681315217645402 >500 4.7933103920048046E-5 0.03291167069404221 >1k 2.3966550226740317E-5 0.022593636049931146 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 1.2711312865068905E-5 0.0 3 0.0 0.0 0.0 1.2711312865068905E-5 0.0 4 0.0 1.1440181578562015E-4 0.0 2.542262573013781E-5 0.0 5 0.0 1.1440181578562015E-4 0.0 2.542262573013781E-5 0.0 6 0.0 1.1440181578562015E-4 0.0 2.542262573013781E-5 2.542262573013781E-5 7 0.0 1.1440181578562015E-4 0.0 2.542262573013781E-5 2.542262573013781E-5 8 0.0 1.2711312865068905E-4 0.0 2.542262573013781E-5 2.542262573013781E-5 9 0.0 3.9405069881713606E-4 0.0 2.542262573013781E-5 5.084525146027562E-5 10-11 0.0 3.9405069881713606E-4 0.0 3.813393859520672E-5 6.991222075787898E-5 12-13 0.0 3.9405069881713606E-4 0.0 3.813393859520672E-5 8.897919005548234E-5 14-15 0.0 5.720090789281008E-4 0.0 5.084525146027562E-5 1.1440181578562015E-4 16-17 0.0 5.720090789281008E-4 0.0 5.084525146027562E-5 1.1440181578562015E-4 18-19 0.0 6.03787361090773E-4 0.0 5.084525146027562E-5 1.1440181578562015E-4 20-21 0.0 6.546326125510486E-4 0.0 5.084525146027562E-5 1.1440181578562015E-4 22-23 0.0 7.690344283366688E-4 0.0 6.355656432534452E-5 1.2075747221815459E-4 24-25 0.0 8.516579619596166E-4 0.0 7.626787719041344E-5 1.2711312865068905E-4 26-27 0.0 8.897919005548233E-4 0.0 1.2075747221815459E-4 1.2711312865068905E-4 28-29 0.0 9.025032134198922E-4 0.0 3.495611037893949E-4 1.334687850832235E-4 30-31 0.0 0.0010359719985031158 0.0 0.0011567294707212703 1.4618009794829242E-4 32-33 0.0 0.001067750280665788 0.0 0.003126982964806951 1.9066969297603357E-4 34-35 0.0 0.0012393530043442182 0.0 0.005573910691332715 2.033810058411025E-4 36-37 0.0 0.0014490896666178553 0.0 0.009533484648801679 2.033810058411025E-4 38-39 0.0 0.0015317132002408032 0.0 0.019244927677714324 2.160923187061714E-4 40-41 0.0 0.0017033159239192334 0.0 0.029623714632043087 2.288036315712403E-4 42-43 0.0 0.00174144986251444 0.0 0.03620181903971624 2.6058191373391255E-4 44-45 0.0 0.001982964806950749 0.0 0.04394936423097574 2.7329322659898147E-4 46-47 0.0 0.0021863458127918517 0.0 0.0527773710157661 2.9236019589658484E-4 48-49 0.0 0.0021863458127918517 0.0 0.061681645677746866 2.9236019589658484E-4 50-51 0.0 0.0025231956037161775 0.0 0.07014102438945022 2.9236019589658484E-4 52-53 0.0 0.002542262573013781 0.0 0.08965924529376353 3.1142716519418816E-4 54-55 0.0 0.0025549738858788498 0.0 0.11225995956785603 3.3049413449179153E-4 56-57 0.0 0.0026185304502041947 0.0 0.14122268593091553 3.3049413449179153E-4 58-59 0.0 0.0026312417630692635 0.0 0.1641475386830673 3.36849790924326E-4 60-61 0.0 0.002694798327394608 0.0 0.17306452465791317 3.4320544735686045E-4 62-63 0.0 0.00278377751745009 0.0 0.1839962537218724 3.5591676022192937E-4 64-65 0.0 0.003050715087616537 0.0 0.18965278794682808 3.5591676022192937E-4 66-67 0.0 0.0030952046826442786 0.0 0.19486442622150632 3.5591676022192937E-4 68-69 0.0 0.0031905395291322953 0.0 0.20045740388213662 3.5591676022192937E-4 70-71 0.0 0.003241384780592571 0.0 0.2054148158995135 3.5591676022192937E-4 72-73 0.0 0.003285874375620312 0.0 0.20938710116984754 3.686280730869983E-4 74-75 0.0 0.0033812092221083287 0.0 0.21241239363173395 3.7498372951953274E-4 76-77 0.0 0.003495611037893949 0.0 0.21538684084216006 3.8133938595206714E-4 78-79 0.0 0.0035464562893542245 0.0 0.21759860928068206 3.8133938595206714E-4 80-81 0.0 0.003552811945786759 0.0 0.2183040871446934 3.8133938595206714E-4 82-83 0.0 0.0035591676022192933 0.0 0.2186600039049153 3.8133938595206714E-4 84-85 0.0 0.0035845902279494314 0.0 0.21881889531572868 3.8133938595206714E-4 86-87 0.0 0.003648146792274776 0.0 0.2189015188493516 3.8133938595206714E-4 88 0.0 0.0038261051723857404 0.0 0.2189142301622167 3.8133938595206714E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 9495 0.0 49.438347 1 GTATCAA 18010 0.0 38.917194 1 TCAACGC 21455 0.0 32.04663 4 ATCAACG 21590 0.0 31.806389 3 CAACGCA 22155 0.0 30.97584 5 TATCAAC 22440 0.0 30.92756 2 AACGCAG 22915 0.0 30.003677 6 ACGCAGA 26165 0.0 26.243816 7 CGCAGAG 26800 0.0 25.573832 8 GCAGAGT 31260 0.0 21.95263 9 GTGGTAT 4765 0.0 21.400286 1 GTACATG 21970 0.0 20.798336 1 GAGTACT 18755 0.0 20.267693 12-13 CTTATAC 6510 0.0 20.158258 1 TACATGG 22170 0.0 20.009079 2 TGGTATC 4655 0.0 19.87252 2 CAGAGTA 30530 0.0 18.898043 10-11 ACATGGG 22485 0.0 18.8868 3 AGAGTAC 28320 0.0 18.701637 10-11 GTACTTT 21105 0.0 17.949938 14-15 >>END_MODULE