##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138749_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 8998008 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.19006962429907 33.0 32.0 34.0 31.0 34.0 2 32.00907434178765 33.0 32.0 33.0 30.0 34.0 3 32.02786661225463 33.0 31.0 33.0 29.0 34.0 4 32.47609982120487 33.0 33.0 34.0 31.0 34.0 5 32.78654008753938 33.0 33.0 34.0 31.0 34.0 6 36.77398141899852 38.0 37.0 38.0 35.0 38.0 7 37.05372377975214 38.0 38.0 38.0 36.0 38.0 8 37.08479532358717 38.0 38.0 38.0 36.0 38.0 9 37.174936052512955 38.0 38.0 38.0 36.0 38.0 10-11 37.22909826263769 38.0 38.0 38.0 36.0 38.0 12-13 37.26803710332331 38.0 38.0 38.0 36.5 38.0 14-15 37.29521745257395 38.0 38.0 38.0 37.0 38.0 16-17 37.291362210391455 38.0 38.0 38.0 37.0 38.0 18-19 37.16277813933928 38.0 38.0 38.0 36.0 38.0 20-21 37.27840559361856 38.0 38.0 38.0 37.0 38.0 22-23 37.29983836182225 38.0 38.0 38.0 37.0 38.0 24-25 37.30673089007509 38.0 38.0 38.0 37.0 38.0 26-27 37.272938645473324 38.0 38.0 38.0 37.0 38.0 28-29 37.2503840482769 38.0 38.0 38.0 37.0 38.0 30-31 37.25298686479498 38.0 38.0 38.0 37.0 38.0 32-33 37.238601678559476 38.0 38.0 38.0 37.0 38.0 34-35 37.22483826390717 38.0 38.0 38.0 37.0 38.0 36-37 37.202502996692104 38.0 38.0 38.0 36.5 38.0 38-39 37.16943013304348 38.0 38.0 38.0 36.0 38.0 40-41 37.16094635647257 38.0 38.0 38.0 36.0 38.0 42-43 37.13407497068086 38.0 38.0 38.0 36.0 38.0 44-45 37.10346399013924 38.0 38.0 38.0 36.0 38.0 46-47 37.069640174744606 38.0 38.0 38.0 36.0 38.0 48-49 37.03609151275124 38.0 38.0 38.0 36.0 38.0 50-51 37.01131109004872 38.0 38.0 38.0 36.0 38.0 52-53 36.989926301301026 38.0 38.0 38.0 36.0 38.0 54-55 36.974098996611346 38.0 38.0 38.0 36.0 38.0 56-57 36.95945947431645 38.0 38.0 38.0 36.0 38.0 58-59 36.94710777721667 38.0 38.0 38.0 36.0 38.0 60-61 36.94061529969882 38.0 38.0 38.0 36.0 38.0 62-63 36.93337265446637 38.0 38.0 38.0 36.0 38.0 64-65 36.93622523766096 38.0 38.0 38.0 36.0 38.0 66-67 36.92613962904764 38.0 38.0 38.0 36.0 38.0 68-69 36.9265272031916 38.0 38.0 38.0 36.0 38.0 70-71 36.914491963142794 38.0 38.0 38.0 35.5 38.0 72-73 36.884975663929225 38.0 38.0 38.0 35.0 38.0 74-75 36.89972136662976 38.0 38.0 38.0 35.0 38.0 76-77 36.886999292384786 38.0 38.0 38.0 35.0 38.0 78-79 36.87348132087219 38.0 38.0 38.0 35.0 38.0 80-81 36.84663887929999 38.0 38.0 38.0 35.0 38.0 82-83 36.832240547958705 38.0 38.0 38.0 35.0 38.0 84-85 36.8096081787898 38.0 38.0 38.0 35.0 38.0 86-87 36.76867269530432 38.0 38.0 38.0 35.0 38.0 88-89 36.74883000876727 38.0 38.0 38.0 35.0 38.0 90-91 36.75428479957205 38.0 38.0 38.0 35.0 38.0 92-93 36.71852795272027 38.0 38.0 38.0 35.0 38.0 94-95 36.65945704424152 38.0 38.0 38.0 34.0 38.0 96-97 36.67539003256816 38.0 38.0 38.0 34.0 38.0 98-99 36.70078817284238 38.0 38.0 38.0 34.0 38.0 100 35.085780429064116 38.0 35.0 38.0 29.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 21.0 19 41.0 20 95.0 21 264.0 22 889.0 23 2500.0 24 5596.0 25 10855.0 26 18843.0 27 30145.0 28 44878.0 29 64824.0 30 87300.0 31 114729.0 32 148871.0 33 197120.0 34 278586.0 35 458192.0 36 1089284.0 37 6444974.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.55749805957052 19.596348436231665 13.80655585102836 25.03959765316946 2 14.448097845656505 20.23197801113313 42.697894911851606 22.622029231358763 3 18.136002990884204 25.844620275954412 30.036548089310433 25.98282864385095 4 12.358468674399933 17.71692134525775 39.582961028707686 30.34164895163463 5 13.505603856336956 37.12765713881795 35.62566004049545 13.741078964349645 6 29.789468349681076 38.007022018937135 18.946870531636982 13.25663909974481 7 26.281533930962038 32.558758018165356 23.4650988230059 17.694609227866707 8 23.949189642863175 37.033507860850975 21.28758943090515 17.729713065380693 9 25.420637545554527 16.922667772689245 21.399214137173473 36.257480544582755 10-11 24.07321709427242 26.677143429968055 29.109570696091847 20.14006877966768 12-13 24.988326582301692 24.245406552506207 29.220191247895716 21.546075617296385 14-15 22.145577467631302 25.498197850823956 26.864167079674818 25.492057601869927 16-17 21.72037410946956 28.579642294161108 27.504348740298962 22.195634856070363 18-19 21.703331448471705 27.671419051861257 29.219728410999412 21.405521088667626 20-21 22.47965707772321 26.9953434890868 29.138002010286158 21.386997422903836 22-23 22.184071899874752 26.895447449411396 29.035019017148084 21.885461633565768 24-25 21.9797848360092 26.928980142825726 29.16843063166982 21.92280438949526 26-27 21.96490262618851 27.084488839602113 29.038490935216604 21.91211759899277 28-29 21.914090145007602 27.125405177464057 29.065525208299135 21.8949794692292 30-31 22.10509323388208 27.013116385334694 29.004532387699854 21.877257993083365 32-33 21.91555073959232 27.13819868731685 29.00683428581875 21.939416287272085 34-35 22.057157530119373 27.165240133488343 28.975083016959907 21.802519319432374 36-37 22.053948634174077 27.118506518964118 28.918446524511026 21.90909832235078 38-39 21.90881762174175 27.235391912551975 28.98948079986066 21.866309665845613 40-41 22.168246495748246 27.075496744915917 28.861140445745065 21.89511631359077 42-43 21.983942080810937 27.188487463013832 28.763471786381267 22.06409866979396 44-45 22.1117815744121 27.252252857515252 28.63597277250523 21.999992795567422 46-47 22.163306861630325 27.261808221298246 28.377854099236988 22.197030817834438 48-49 22.099805761466545 27.336690253326573 28.391844579483084 22.171659405723798 50-51 22.120182743830544 27.45905719453548 28.28843807136277 22.132321990271205 52-53 22.24779338769891 27.483840602723998 28.137896265497993 22.130469744079097 54-55 22.22044135047046 27.367579162097805 28.213909722493607 22.198069764938133 56-57 22.19095797727622 27.466100061902964 28.18370910533014 22.15923285549067 58-59 22.206165313613955 27.471173514741448 28.173942399700298 22.1487187719443 60-61 22.250939054081922 27.43380179463334 28.218915404228856 22.096343747055887 62-63 22.211082226539375 27.506936632738572 28.178069373377674 22.10391176734438 64-65 22.206095684432427 27.442340352782836 28.18789018300955 22.163673779775184 66-67 22.27087173638506 27.462602817065267 28.03721743292835 22.229308013621317 68-69 22.21928885763462 27.42645873195823 28.14019766310323 22.214054747303923 70-71 22.24728613784948 27.250439084421362 28.14047997885185 22.361794798877305 72-73 22.300576926230907 27.28674987289456 28.047162110846035 22.3655110900285 74-75 22.15091369147727 27.46480506705611 28.05612429739932 22.328156944067302 76-77 22.320804886996843 27.390180547667875 27.971564654683938 22.317449910651348 78-79 22.254429659140623 27.39715241798973 27.91067800336895 22.437739919500697 80-81 22.28421499547576 27.45384523674409 27.86961035336944 22.392329414410707 82-83 22.302599276376828 27.45740704453077 27.97579759130896 22.264196087783443 84-85 22.439207826483837 27.383346893417738 27.871860509726883 22.30558477037155 86-87 22.266970989692265 27.440744641653236 27.958794660556208 22.33348970809829 88-89 22.33762253460542 27.43424886328885 27.88883922720445 22.339289374901284 90-91 22.360381080202828 27.508905035915802 27.83419110646495 22.296522777416417 92-93 22.40497181831913 27.460886569940712 27.874832917539166 22.259308694200993 94-95 22.26803780394642 27.567363955393105 27.867991430265338 22.29660681039514 96-97 22.364522624888224 27.68733539728472 27.925014203766192 22.02312777406087 98-99 23.4445001498605 29.533249911239963 28.16524950375241 18.857000435147132 100 22.359616473437384 30.524013815739497 22.048420834931786 25.067948875891332 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2235.0 1 2051.0 2 2592.0 3 3655.0 4 4625.5 5 6276.0 6 7816.0 7 10032.5 8 12902.5 9 14137.0 10 13263.5 11 12539.0 12 13794.0 13 16709.5 14 21842.5 15 27621.0 16 31975.5 17 34399.5 18 33927.0 19 31495.5 20 29118.5 21 28088.0 22 29644.0 23 34275.0 24 42621.0 25 55167.5 26 70739.5 27 87469.0 28 105115.0 29 124894.5 30 143581.5 31 162023.0 32 181970.5 33 200301.0 34 219645.5 35 237417.5 36 255657.5 37 275337.0 38 290615.5 39 302715.5 40 316488.0 41 330611.5 42 341136.5 43 350831.5 44 358554.5 45 366409.0 46 372795.5 47 374529.0 48 373980.0 49 370777.0 50 364305.5 51 353196.0 52 337945.5 53 319941.0 54 300137.0 55 278519.5 56 256320.5 57 231868.0 58 206137.5 59 179881.5 60 150452.0 61 121838.5 62 95924.5 63 73331.5 64 55071.0 65 41159.0 66 30942.0 67 23296.0 68 17370.0 69 12915.5 70 9513.0 71 6641.0 72 4518.0 73 3044.5 74 2019.0 75 1265.0 76 770.0 77 456.0 78 287.0 79 196.5 80 127.0 81 77.0 82 50.5 83 36.5 84 25.0 85 15.5 86 11.5 87 7.5 88 5.0 89 4.5 90 2.5 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.005045561195322342 6 2.8895284378497996E-4 7 2.2227141829613845E-5 8 0.0 9 0.0 10-11 0.0 12-13 5.556785457403461E-6 14-15 1.6670356372210382E-5 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 3.9014191635145526E-5 34-35 1.340287489432671E-4 36-37 1.792213459791915E-4 38-39 1.3501714717769158E-4 40-41 7.9168106065357E-5 42-43 1.5346933634345435E-4 44-45 1.257915217086148E-4 46-47 2.8789436994345927E-5 48-49 3.073385070968231E-4 50-51 4.7879434445784744E-4 52-53 3.5255139979064324E-4 54-55 0.0019687080651880034 56-57 0.0031718164647743 58-59 0.0018755012321983176 60-61 0.0034339921528752956 62-63 0.0020542659263043644 64-65 0.0027105718113380832 66-67 6.901563857397423E-4 68-69 7.761076080028242E-4 70-71 3.942732252119328E-4 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86-87 0.0 88-89 1.3442258643573941E-5 90-91 0.0 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 166.0 20-21 587.0 22-23 1003.0 24-25 941.0 26-27 2014.0 28-29 4627.0 30-31 13706.0 32-33 16692.0 34-35 22481.0 36-37 36572.0 38-39 46124.0 40-41 44802.0 42-43 49476.0 44-45 59308.0 46-47 61948.0 48-49 60351.0 50-51 54988.0 52-53 51535.0 54-55 54324.0 56-57 57347.0 58-59 59061.0 60-61 59255.0 62-63 55162.0 64-65 56492.0 66-67 60513.0 68-69 62980.0 70-71 64052.0 72-73 59017.0 74-75 58254.0 76-77 60962.0 78-79 63804.0 80-81 64885.0 82-83 60746.0 84-85 59053.0 86-87 59734.0 88-89 64765.0 90-91 67466.0 92-93 67732.0 94-95 79994.0 96-97 278827.0 98-99 629786.0 100-101 6266476.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 83.41684772998282 #Duplication Level Percentage of deduplicated Percentage of total 1 88.66217046803055 73.95918773341485 2 7.676723719213349 12.807361871015349 3 2.0273611674804393 5.073482334041881 4 0.751451961087248 2.507350152576478 5 0.34738199404451586 1.4488755450674593 6 0.18858553775569784 0.9438726652226386 7 0.10871973855777345 0.6348340513562132 8 0.061106272356291506 0.40778340931933016 9 0.04015802460199637 0.3014870241025472 >10 0.13324504439400825 1.6562130322159745 >50 0.0026337717124837725 0.14553579760597912 >100 3.9458582482447796E-4 0.05030054942724751 >500 2.257164722848531E-5 0.01743524341042813 >1k 4.514329358295909E-5 0.04628059122364644 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 4.445428365922769E-5 0.0 0.0 0.0 3 0.0 5.556785457403461E-5 0.0 1.1113570914806922E-5 0.0 4 0.0 1.1113570914806922E-4 0.0 1.1113570914806922E-5 1.1113570914806922E-5 5 0.0 1.1113570914806922E-4 0.0 1.1113570914806922E-5 1.1113570914806922E-5 6 0.0 1.1113570914806922E-4 0.0 1.1113570914806922E-5 1.1113570914806922E-5 7 0.0 1.3336285097768306E-4 0.0 1.1113570914806922E-5 1.1113570914806922E-5 8 0.0 1.3336285097768306E-4 0.0 1.1113570914806922E-5 1.1113570914806922E-5 9 0.0 3.111799856145938E-4 0.0 2.2227141829613845E-5 1.1113570914806922E-5 10-11 0.0 3.111799856145938E-4 0.0 8.890856731845538E-5 1.1113570914806922E-5 12-13 0.0 3.222935565294007E-4 0.0 8.890856731845538E-5 1.1113570914806922E-5 14-15 0.0 5.612353311977496E-4 0.0 1.0002213823326229E-4 1.6670356372210382E-5 16-17 0.0 6.001328293995737E-4 0.0 1.0557892369066576E-4 4.445428365922769E-5 18-19 0.0 6.279167566865911E-4 0.0 1.1113570914806922E-4 4.445428365922769E-5 20-21 0.0 6.557006839736084E-4 0.0 1.1113570914806922E-4 4.445428365922769E-5 22-23 0.0 7.168253240050465E-4 0.0 1.3336285097768306E-4 5.001106911663115E-5 24-25 1.1113570914806922E-5 8.44631389525326E-4 0.0 1.6670356372210383E-4 5.556785457403461E-5 26-27 1.1113570914806922E-5 9.27983171386378E-4 0.0 2.0560106192392803E-4 5.556785457403461E-5 28-29 1.1113570914806922E-5 9.335399568437814E-4 0.0 3.50077483816418E-4 5.556785457403461E-5 30-31 1.1113570914806922E-5 0.0010335620950770437 0.0 9.27983171386378E-4 6.112464003143807E-5 32-33 1.1113570914806922E-5 0.0010446756659918505 0.0 0.002122692044728122 7.779499640364845E-5 34-35 1.1113570914806922E-5 0.0011280274478529025 0.0 0.003495218052706777 7.779499640364845E-5 36-37 1.1113570914806922E-5 0.0012224928006287614 0.0 0.005762386519327389 7.779499640364845E-5 38-39 1.1113570914806922E-5 0.0012725038697453926 0.0 0.009257604572034166 7.779499640364845E-5 40-41 1.1113570914806922E-5 0.001433650648010093 0.0 0.013364069025055323 7.779499640364845E-5 42-43 1.1113570914806922E-5 0.0014503210043823032 0.0 0.017214921347035922 7.779499640364845E-5 44-45 1.1113570914806922E-5 0.0015170024298711447 0.0 0.02149920293469399 7.779499640364845E-5 46-47 1.1113570914806922E-5 0.001567013498987776 0.0 0.02620024343165732 7.779499640364845E-5 48-49 1.1113570914806922E-5 0.001567013498987776 0.0 0.03095129499773728 8.890856731845538E-5 50-51 1.1113570914806922E-5 0.001833739200943142 0.0 0.03608576476037807 8.890856731845538E-5 52-53 1.1113570914806922E-5 0.001844852771857949 0.0 0.04079791882825621 9.446535277585883E-5 54-55 1.1113570914806922E-5 0.0018893070555171766 0.0 0.04525446076509378 1.0557892369066576E-4 56-57 1.1113570914806922E-5 0.0019337613391764044 0.0 0.04985547912382385 1.1669249460547268E-4 58-59 1.1113570914806922E-5 0.001972658837378229 0.0 0.0542731235624596 1.3336285097768306E-4 60-61 1.1113570914806922E-5 0.0019948859792078425 0.0 0.05881301728115823 1.3336285097768306E-4 62-63 1.1113570914806922E-5 0.002000442764665246 0.0 0.06308062851244409 1.3336285097768306E-4 64-65 1.1113570914806922E-5 0.002267168466620612 0.0 0.06689814012168027 1.3336285097768306E-4 66-67 1.1113570914806922E-5 0.002267168466620612 0.0 0.07115463778205132 1.3336285097768306E-4 68-69 1.1113570914806922E-5 0.002306065964822436 0.0 0.07543891936970938 1.3336285097768306E-4 70-71 1.1113570914806922E-5 0.0023560770339390675 0.0 0.07933978276080661 1.3336285097768306E-4 72-73 1.1113570914806922E-5 0.0023838609612260846 0.0 0.08257938868247283 1.3336285097768306E-4 74-75 1.1113570914806922E-5 0.0024227584594279086 0.0 0.08497992000007112 1.3336285097768306E-4 76-77 1.1113570914806922E-5 0.0025172238122037676 0.0 0.08743046238678605 1.3336285097768306E-4 78-79 1.1113570914806922E-5 0.002567234881320399 0.0 0.0891086115949219 1.3336285097768306E-4 80-81 1.1113570914806922E-5 0.002567234881320399 0.0 0.08961427907154562 1.3336285097768306E-4 82-83 1.1113570914806922E-5 0.0025727916667778023 0.0 0.09012550333362673 1.4447642189248998E-4 84-85 1.1113570914806922E-5 0.002589462023150013 0.0 0.09033110439555067 1.4447642189248998E-4 86-87 1.1113570914806922E-5 0.002722824874127696 0.0 0.0903922290355821 1.4447642189248998E-4 88 1.1113570914806922E-5 0.002845074154190572 0.0 0.0903977858210395 1.4447642189248998E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 12755 0.0 41.74407 1 GTATCAA 21965 0.0 35.39212 1 TCAACGC 24260 0.0 31.43536 4 CAACGCA 24330 0.0 31.202118 5 ATCAACG 24480 0.0 31.09963 3 AACGCAG 24715 0.0 30.730732 6 TATCAAC 26395 0.0 29.073654 2 ACGCAGA 28040 0.0 27.133125 7 CGCAGAG 28510 0.0 26.655361 8 GCAGAGT 34010 0.0 22.319195 9 GTACATG 23025 0.0 20.31425 1 GAGTACT 21245 0.0 20.164343 12-13 TACATGG 22815 0.0 19.758848 2 AGAGTAC 30345 0.0 19.312098 10-11 CAGAGTA 33235 0.0 19.272589 10-11 ACATGGG 22855 0.0 18.926174 3 GTACTTT 24250 0.0 17.576872 14-15 CATGGGG 17450 0.0 17.19758 4 AGTACTT 23750 0.0 16.529076 12-13 ACTTTTT 29085 0.0 14.842617 16-17 >>END_MODULE