##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138747_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 8768982 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.190281380438456 33.0 32.0 34.0 31.0 34.0 2 31.98215391478737 33.0 32.0 33.0 30.0 34.0 3 32.025814855133696 33.0 31.0 33.0 29.0 34.0 4 32.45607688554954 33.0 33.0 34.0 31.0 34.0 5 32.78989351329493 33.0 33.0 34.0 31.0 34.0 6 36.78775004897946 38.0 37.0 38.0 35.0 38.0 7 37.077880990062475 38.0 38.0 38.0 36.0 38.0 8 37.118376682720985 38.0 38.0 38.0 36.0 38.0 9 37.21095641432495 38.0 38.0 38.0 36.0 38.0 10-11 37.25786687667964 38.0 38.0 38.0 36.5 38.0 12-13 37.295602784907075 38.0 38.0 38.0 37.0 38.0 14-15 37.32117011986112 38.0 38.0 38.0 37.0 38.0 16-17 37.318292590861745 38.0 38.0 38.0 37.0 38.0 18-19 37.19119978807118 38.0 38.0 38.0 36.5 38.0 20-21 37.30954533824026 38.0 38.0 38.0 37.0 38.0 22-23 37.331419599744976 38.0 38.0 38.0 37.0 38.0 24-25 37.33896216773992 38.0 38.0 38.0 37.0 38.0 26-27 37.30749608777916 38.0 38.0 38.0 37.0 38.0 28-29 37.28603124468441 38.0 38.0 38.0 37.0 38.0 30-31 37.28827731966423 38.0 38.0 38.0 37.0 38.0 32-33 37.27131430288999 38.0 38.0 38.0 37.0 38.0 34-35 37.256730065440465 38.0 38.0 38.0 37.0 38.0 36-37 37.23525268581031 38.0 38.0 38.0 37.0 38.0 38-39 37.19292089630436 38.0 38.0 38.0 36.5 38.0 40-41 37.19902881727085 38.0 38.0 38.0 37.0 38.0 42-43 37.174903793447356 38.0 38.0 38.0 36.0 38.0 44-45 37.144527444427595 38.0 38.0 38.0 36.0 38.0 46-47 37.10706157620815 38.0 38.0 38.0 36.0 38.0 48-49 37.07386084511823 38.0 38.0 38.0 36.0 38.0 50-51 37.04869235385462 38.0 38.0 38.0 36.0 38.0 52-53 37.02986067878214 38.0 38.0 38.0 36.0 38.0 54-55 37.01417149285126 38.0 38.0 38.0 36.0 38.0 56-57 37.00145460132371 38.0 38.0 38.0 36.0 38.0 58-59 36.99147110015562 38.0 38.0 38.0 36.0 38.0 60-61 36.98929460246339 38.0 38.0 38.0 36.0 38.0 62-63 36.981915131842456 38.0 38.0 38.0 36.0 38.0 64-65 36.98567495576805 38.0 38.0 38.0 36.0 38.0 66-67 36.97680826285909 38.0 38.0 38.0 36.0 38.0 68-69 36.97608250333237 38.0 38.0 38.0 36.0 38.0 70-71 36.965186705960775 38.0 38.0 38.0 36.0 38.0 72-73 36.933485314844916 38.0 38.0 38.0 36.0 38.0 74-75 36.950472233712965 38.0 38.0 38.0 36.0 38.0 76-77 36.93798004481609 38.0 38.0 38.0 36.0 38.0 78-79 36.92809775285453 38.0 38.0 38.0 36.0 38.0 80-81 36.9034351755056 38.0 38.0 38.0 35.5 38.0 82-83 36.893398529165665 38.0 38.0 38.0 35.0 38.0 84-85 36.875168107678334 38.0 38.0 38.0 35.0 38.0 86-87 36.836632741239015 38.0 38.0 38.0 35.0 38.0 88-89 36.81870787390288 38.0 38.0 38.0 35.0 38.0 90-91 36.82894905465135 38.0 38.0 38.0 35.0 38.0 92-93 36.794043818451044 38.0 38.0 38.0 35.0 38.0 94-95 36.73572301708427 38.0 38.0 38.0 35.0 38.0 96-97 36.75234890060045 38.0 38.0 38.0 35.0 38.0 98-99 36.78194396586775 38.0 38.0 38.0 35.0 38.0 100 35.2188985190142 38.0 35.0 38.0 29.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 2.0 18 22.0 19 49.0 20 87.0 21 226.0 22 735.0 23 2055.0 24 4818.0 25 9476.0 26 16528.0 27 26868.0 28 40430.0 29 58851.0 30 80155.0 31 106520.0 32 139597.0 33 183396.0 34 260421.0 35 431177.0 36 1041165.0 37 6366404.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.56744762390891 19.365634460191615 13.921764236715276 25.145153679184197 2 14.747264847846647 19.909323568003675 42.39933438111744 22.944077203032233 3 18.54003121456972 25.130317293387076 29.712080604111176 26.61757088793203 4 12.738833310411628 17.500298210214137 38.48942784920758 31.271440630166648 5 13.898585478301023 36.813111682015276 35.14292618834112 14.145376651342579 6 30.521635999749115 37.152669361782195 18.48563396985956 13.840060668609128 7 26.973872223708522 32.164144024927865 22.543814093813854 18.31816965754976 8 24.34197036782605 36.80593710877728 20.870278898964557 17.981813624432117 9 25.463594291788944 16.96686114762238 21.017126047242428 36.55241851334625 10-11 24.48173573625764 26.54436968852257 28.471075661918338 20.50281891330145 12-13 25.305327648370568 23.918610160142315 28.6821337232836 22.09392846820352 14-15 22.42871079155544 25.27342542574642 26.28192339098902 26.01594039170912 16-17 22.105085858312858 28.448940823461605 26.991496846498258 22.45447647172728 18-19 22.143881695731615 27.392204705175583 28.722735432687625 21.741178166405177 20-21 22.757224015278155 26.63107442877834 28.75769648264977 21.854005073293738 22-23 22.540207563042507 26.636036840412896 28.607703842466904 22.216051754077693 24-25 22.36535399537411 26.774692972899178 28.720635491082263 22.13931754064445 26-27 22.34369655924292 26.89223160987792 28.668726776217134 22.095345054662026 28-29 22.209290020409007 26.926118252441306 28.69509855796315 22.169493169186534 30-31 22.613988617480963 26.699780279758645 28.61233122405327 22.073899878707117 32-33 22.158449849265356 26.995608514703072 28.612830703821384 22.233110932210185 34-35 22.423624411901464 26.94034836453335 28.61598720266418 22.020040020901003 36-37 22.292626536035325 26.94263417647189 28.593163942152522 22.17157534534026 38-39 22.154063791208188 26.878994026614233 28.780611363700693 22.186330818476886 40-41 22.424926005631534 26.717426843114634 28.663279416009637 22.194367735244196 42-43 22.394841639567666 26.798586602142795 28.509197780894375 22.297373977395164 44-45 22.339701674920835 26.931446330272536 28.43674251103004 22.29210948377659 46-47 22.527919589923766 26.86977131934471 28.103989282286683 22.498319808444844 48-49 22.42681792714815 26.970619123115036 28.084655765372773 22.517907184364034 50-51 22.337553347651045 27.127177725664602 28.099556021203476 22.43571290548088 52-53 22.550478573063895 27.025301720667862 28.09241170797796 22.331807998290284 54-55 22.453978287254333 26.965131240741357 27.999555889483403 22.581334582520903 56-57 22.54042611388723 27.1464761585437 27.865483294755244 22.44761443281383 58-59 22.407248249879334 27.24622764250828 28.01638752576176 22.33013658185062 60-61 22.550321361754612 27.36033944229877 27.85038805284711 22.238951143099506 62-63 22.399862213568593 27.525120242030965 27.797253456298577 22.27776408810187 64-65 22.39543995036234 27.45985087241468 27.770578577916417 22.374130599306564 66-67 22.455145673334417 27.424380373982565 27.687579220446935 22.432894732236083 68-69 22.398321949507544 27.390800923295167 27.787910079626727 22.422967047570562 70-71 22.468458706390372 27.16711974052957 27.825625415051146 22.53879613802891 72-73 22.545847234496648 27.076474434684204 27.758949653258135 22.61872867756101 74-75 22.397770529237835 27.230211925043307 27.742839128566764 22.629178417152087 76-77 22.601477108100337 27.144894207968328 27.65831717914194 22.595311504789393 78-79 22.539759628560834 27.130696932080156 27.671969293932406 22.6575741454266 80-81 22.53834079908941 27.219466115065643 27.609306830238168 22.632886255606774 82-83 22.59444193249639 27.19210479718092 27.6564226833674 22.55703058695529 84-85 22.66955332059022 27.186941816304394 27.59031727806278 22.553187585042604 86-87 22.53063157057479 27.187441698016794 27.682047801206703 22.599878930201708 88-89 22.584365635902177 27.19704481310537 27.592204210566827 22.626385340425625 90-91 22.630718595052283 27.235313964737035 27.579522071227963 22.554445368982723 92-93 22.661064782785463 27.229603678362924 27.576623371787807 22.532708167063802 94-95 22.563509017763696 27.28802918876981 27.562710089405474 22.58575170406102 96-97 22.677238952522647 27.36514249578204 27.60558545349471 22.3520330982006 98-99 23.76893090832041 29.317910795020836 27.80303370328541 19.110124593373342 100 22.65534044607384 30.144415010527 21.78500928182303 25.415235261576136 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1920.0 1 1767.0 2 2358.5 3 3344.0 4 4083.5 5 5449.0 6 6869.5 7 9225.0 8 12311.0 9 13849.0 10 13386.0 11 12757.0 12 13816.0 13 16646.0 14 21581.0 15 27107.5 16 30959.0 17 32887.5 18 32621.0 19 30163.5 20 27207.5 21 25333.0 22 25710.0 23 29180.5 24 36158.5 25 46897.0 26 60729.5 27 75719.0 28 91053.5 29 108291.0 30 125139.5 31 142445.5 32 162109.0 33 181557.5 34 200085.0 35 217280.0 36 236617.0 37 256214.0 38 272091.5 39 286826.0 40 302272.0 41 316257.0 42 327819.0 43 345220.5 44 359440.0 45 366063.0 46 368363.0 47 366180.0 48 366475.0 49 364885.0 50 361376.0 51 355364.0 52 343768.0 53 327711.0 54 311349.0 55 293686.0 56 271875.0 57 247110.0 58 220149.5 59 192101.5 60 163312.0 61 134294.5 62 106914.5 63 83152.5 64 62459.0 65 45998.5 66 34009.0 67 25657.0 68 19332.5 69 14087.0 70 10223.0 71 7344.5 72 5158.0 73 3525.0 74 2339.0 75 1487.5 76 925.0 77 567.0 78 367.5 79 233.5 80 149.0 81 98.0 82 63.0 83 38.0 84 26.0 85 20.5 86 17.5 87 13.0 88 7.5 89 3.0 90 2.0 91 2.0 92 1.5 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.004960667042080825 6 3.649226329806584E-4 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 5.701916140322787E-6 14-15 5.701916140322787E-6 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 5.146671267409544E-5 34-35 1.3180587516092496E-4 36-37 1.6672106180849926E-4 38-39 1.559628316311338E-4 40-41 9.290842208458743E-5 42-43 1.4594441771067032E-4 44-45 1.409962939124145E-4 46-47 5.326892449567942E-5 48-49 3.160326901829573E-4 50-51 4.323397325618471E-4 52-53 3.8076820771618916E-4 54-55 0.002135335105560078 56-57 0.003357700764158775 58-59 0.0019444206793028083 60-61 0.0034765480402966123 62-63 0.0021238908778698842 64-65 0.002903441019436013 66-67 6.810167286985924E-4 68-69 7.514867877061386E-4 70-71 3.695813777669569E-4 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86-87 0.0 88-89 7.023182612791084E-6 90-91 0.0 92-93 0.0 94-95 7.23339339460982E-6 96-97 0.0 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 78.0 20-21 278.0 22-23 664.0 24-25 665.0 26-27 1838.0 28-29 4609.0 30-31 13440.0 32-33 17188.0 34-35 24102.0 36-37 38643.0 38-39 45810.0 40-41 44782.0 42-43 51115.0 44-45 62032.0 46-47 63379.0 48-49 59693.0 50-51 54928.0 52-53 52900.0 54-55 57424.0 56-57 60154.0 58-59 60549.0 60-61 59779.0 62-63 58213.0 64-65 63473.0 66-67 70080.0 68-69 72212.0 70-71 79598.0 72-73 63388.0 74-75 62485.0 76-77 65255.0 78-79 67121.0 80-81 66562.0 82-83 63133.0 84-85 62448.0 86-87 64899.0 88-89 67782.0 90-91 68323.0 92-93 68891.0 94-95 82052.0 96-97 273934.0 98-99 608044.0 100-101 5967039.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 85.48752537180359 #Duplication Level Percentage of deduplicated Percentage of total 1 90.35384773156716 77.24126850392425 2 6.822382348300245 11.66457168192924 3 1.5430571407063458 3.9573640939882924 4 0.5544677807553944 1.896003139006976 5 0.2699942912872825 1.1540571913331843 6 0.1454374956445401 0.7459854959354515 7 0.08514125657330253 0.5094960732048207 8 0.05040383306447709 0.344711916634851 9 0.037022787514808406 0.28484878383063694 >10 0.13345601630855533 1.8191827386595516 >50 0.0037623074259402144 0.2216967716607172 >100 9.817703514769613E-4 0.1228927902319961 >500 2.262025600577085E-5 0.014213060362693703 >1k 2.2620244424950268E-5 0.023707759297322543 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 2.280766456129115E-5 0.0 2.280766456129115E-5 0.0 3 0.0 2.280766456129115E-5 0.0 2.280766456129115E-5 0.0 4 0.0 6.842299368387346E-5 0.0 4.56153291225823E-5 0.0 5 0.0 6.842299368387346E-5 0.0 4.56153291225823E-5 0.0 6 0.0 6.842299368387346E-5 0.0 4.56153291225823E-5 0.0 7 0.0 6.842299368387346E-5 0.0 4.56153291225823E-5 0.0 8 0.0 7.982682596451903E-5 0.0 4.56153291225823E-5 1.1403832280645575E-5 9 0.0 2.0526898105162035E-4 0.0 4.56153291225823E-5 3.421149684193673E-5 10-11 0.0 2.0526898105162035E-4 0.0 6.272107754355067E-5 3.421149684193673E-5 12-13 0.0 2.0526898105162035E-4 0.0 9.693257438548739E-5 3.421149684193673E-5 14-15 5.701916140322787E-6 2.736919747354938E-4 0.0 1.0833640666613297E-4 5.131724526290509E-5 16-17 1.1403832280645575E-5 2.736919747354938E-4 0.0 1.1974023894677854E-4 5.701916140322788E-5 18-19 1.1403832280645575E-5 3.0790347157743053E-4 0.0 1.2544215508710133E-4 6.272107754355067E-5 20-21 1.1403832280645575E-5 3.421149684193673E-4 0.0 1.2544215508710133E-4 6.842299368387346E-5 22-23 1.1403832280645575E-5 3.7062454912098117E-4 0.0 1.368459873677469E-4 7.982682596451902E-5 24-25 1.1403832280645575E-5 3.76326465261304E-4 0.0 1.7675940035000642E-4 9.12306582451646E-5 26-27 1.1403832280645575E-5 3.76326465261304E-4 0.0 2.1097089719194313E-4 1.0263449052581018E-4 28-29 1.1403832280645575E-5 3.76326465261304E-4 0.0 3.7632646526130395E-4 1.311440712274241E-4 30-31 1.1403832280645575E-5 4.105379621032407E-4 0.0 9.69325743854874E-4 1.4254790350806971E-4 32-33 1.1403832280645575E-5 4.219417943838863E-4 0.0 0.002172430049462982 1.5965365192903807E-4 34-35 1.1403832280645575E-5 4.390475428048547E-4 0.0 0.003985639382085629 1.824613164903292E-4 36-37 1.1403832280645575E-5 4.56153291225823E-4 0.0 0.006739664877861535 1.824613164903292E-4 38-39 1.1403832280645575E-5 4.84662871927437E-4 0.0 0.01114724605433105 1.8816323263065197E-4 40-41 2.280766456129115E-5 5.473839494709876E-4 0.0 0.015902644115360253 2.0526898105162035E-4 42-43 2.280766456129115E-5 5.530858656113104E-4 0.0 0.020315927207970094 2.0526898105162035E-4 44-45 2.280766456129115E-5 6.158069431548611E-4 0.0 0.025099834849700912 2.280766456129115E-4 46-47 3.421149684193672E-5 6.728261045580889E-4 0.0 0.031143865958443068 2.67990058595171E-4 48-49 4.56153291225823E-5 6.728261045580889E-4 0.0 0.03697692616999328 2.736919747354938E-4 50-51 4.56153291225823E-5 7.355471821016396E-4 0.0 0.042809986381543486 2.850958070161394E-4 52-53 4.56153291225823E-5 7.412490982419624E-4 0.0 0.04823821054713079 3.0220155543710775E-4 54-55 5.131724526290509E-5 7.52652930522608E-4 0.0 0.05364932896429711 3.1930730385807614E-4 56-57 5.701916140322788E-5 7.52652930522608E-4 0.0 0.05871833241304407 3.1930730385807614E-4 58-59 5.701916140322788E-5 7.640567628032536E-4 0.0 0.06361627837758135 3.1930730385807614E-4 60-61 5.701916140322788E-5 7.925663435048675E-4 0.0 0.06828044578036538 3.1930730385807614E-4 62-63 5.701916140322788E-5 8.267778403468042E-4 0.0 0.07272223845367684 3.307111361387217E-4 64-65 5.701916140322788E-5 9.009027501710005E-4 0.0 0.07708420430102378 3.307111361387217E-4 66-67 5.701916140322788E-5 9.12306582451646E-4 0.0 0.0816970544585449 3.421149684193673E-4 68-69 5.701916140322788E-5 9.408161631532599E-4 0.0 0.08572260725361279 3.421149684193673E-4 70-71 6.842299368387346E-5 9.579219115742284E-4 0.0 0.08981088112622423 3.4781688455969007E-4 72-73 6.842299368387346E-5 9.579219115742284E-4 0.0 0.09299255033252435 3.649226329806584E-4 74-75 6.842299368387346E-5 9.69325743854874E-4 0.0 0.0954614800212841 3.820283814016268E-4 76-77 6.842299368387346E-5 9.978353245564879E-4 0.0 0.0980102365360084 3.934322136822724E-4 78-79 6.842299368387346E-5 0.0010149410729774562 0.0 0.09974361904266653 3.9913412982259516E-4 80-81 6.842299368387346E-5 0.0010149410729774562 0.0 0.10035942598582138 3.9913412982259516E-4 82-83 6.842299368387346E-5 0.0010149410729774562 0.0 0.10079847352862624 4.219417943838863E-4 84-85 6.842299368387346E-5 0.0010263449052581018 0.0 0.10099233867739721 4.219417943838863E-4 86-87 6.842299368387346E-5 0.0010377487375387473 0.0 0.10107786741950206 4.219417943838863E-4 88 6.842299368387346E-5 0.0010719602343806842 0.0 0.10110637700020367 4.219417943838863E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 10955 0.0 50.580208 1 GTATCAA 19880 0.0 38.19169 1 TCAACGC 23710 0.0 31.348421 4 ATCAACG 24000 0.0 30.933638 3 CAACGCA 24630 0.0 30.230072 5 TATCAAC 25100 0.0 29.836079 2 AACGCAG 25370 0.0 29.329285 6 CTTATAC 6160 0.0 29.096033 1 ACGCAGA 29170 0.0 25.567753 7 CGCAGAG 29910 0.0 24.935183 8 TATACAC 9725 0.0 22.604483 3 GTGGTAT 5105 0.0 21.996012 1 GCAGAGT 34815 0.0 21.434532 9 GTACATG 24460 0.0 21.01149 1 TACATGG 24180 0.0 20.665382 2 TGGTATC 5115 0.0 20.517622 2 ACATGGG 24100 0.0 20.285969 3 GAGTACT 21095 0.0 20.185244 12-13 TTATACA 9950 0.0 19.619217 2 TATGCCG 5175 0.0 19.589283 42-43 >>END_MODULE