##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138735_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 8875067 Sequences flagged as poor quality 0 Sequence length 19-101 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.763872317808982 33.0 31.0 34.0 30.0 34.0 2 31.479202128840267 33.0 31.0 34.0 28.0 34.0 3 31.79412132888687 33.0 31.0 34.0 30.0 34.0 4 32.9977404114245 37.0 35.0 37.0 27.0 37.0 5 34.43523029178259 37.0 35.0 37.0 28.0 37.0 6 35.080538546920266 37.0 35.0 37.0 32.0 37.0 7 35.21558259785532 37.0 35.0 37.0 32.0 37.0 8 35.35861036316684 37.0 35.0 37.0 32.0 37.0 9 37.118591330071084 39.0 37.0 39.0 32.0 39.0 10-11 36.99924423105763 39.0 37.0 39.0 32.0 39.0 12-13 36.891906787858616 39.0 37.0 39.0 32.0 39.0 14-15 38.241399529716226 40.0 38.0 41.0 32.0 41.0 16-17 38.23751589706309 40.0 38.0 41.0 32.0 41.0 18-19 38.17403716501521 40.0 38.0 41.0 32.0 41.0 20-21 38.23379352276617 40.0 38.0 41.0 32.0 41.0 22-23 38.27722699651038 40.0 38.0 41.0 32.0 41.0 24-25 38.164432910118656 40.0 38.0 41.0 32.0 41.0 26-27 38.07636624565771 40.0 38.0 41.0 32.0 41.0 28-29 38.085552188461676 40.0 38.0 41.0 32.0 41.0 30-31 38.035468649423905 40.0 37.5 41.0 32.0 41.0 32-33 37.93868967471275 40.0 37.0 41.0 32.0 41.0 34-35 37.83359266926372 40.0 37.0 41.0 31.0 41.0 36-37 37.79652764777488 40.0 37.0 41.0 31.0 41.0 38-39 37.73930986423619 40.0 37.0 41.0 31.0 41.0 40-41 37.6474168686478 40.0 37.0 41.0 31.0 41.0 42-43 37.62095654932752 40.0 37.0 41.0 31.0 41.0 44-45 37.55901096543788 40.0 36.5 41.0 30.5 41.0 46-47 37.42516990630092 40.0 36.0 41.0 30.0 41.0 48-49 37.60104922742123 40.0 37.0 41.0 31.0 41.0 50-51 37.5654428587564 40.0 36.0 41.0 31.0 41.0 52-53 37.49786159691761 40.0 36.0 41.0 30.5 41.0 54-55 37.37380793628622 39.5 36.0 41.0 30.0 41.0 56-57 37.24284575731794 39.0 35.5 41.0 30.0 41.0 58-59 37.12846674147332 39.0 35.0 41.0 30.5 41.0 60-61 36.92028183632467 39.0 35.0 41.0 30.5 41.0 62-63 36.73040483219401 38.5 35.0 41.0 30.0 41.0 64-65 36.46726920319513 38.0 35.0 40.0 30.0 41.0 66-67 36.24453806044021 37.5 35.0 40.0 30.0 41.0 68-69 35.99382394492545 37.0 34.0 40.0 30.0 41.0 70-71 35.74278056795069 36.5 34.0 39.0 30.0 41.0 72-73 35.43852054059596 36.0 34.0 39.0 30.0 41.0 74-75 35.25669468240754 36.0 34.0 39.0 30.0 40.5 76-77 35.063005616894785 35.0 34.0 37.5 30.0 40.0 78-79 34.80570311009038 35.0 34.0 37.0 30.0 39.0 80-81 34.556586728724284 35.0 34.0 37.0 30.0 39.0 82-83 34.31279899456069 35.0 34.0 36.0 30.0 38.5 84-85 34.103051937944684 35.0 34.0 36.0 30.0 37.0 86-87 33.920146649716926 35.0 34.0 36.0 29.5 37.0 88-89 33.783893045704076 35.0 34.0 35.0 29.0 36.5 90-91 33.65413829774086 35.0 34.0 35.0 29.0 36.0 92-93 33.61333218778664 35.0 34.0 35.0 29.0 36.0 94-95 33.59068472910435 35.0 34.0 35.0 29.5 36.0 96-97 33.59766554662022 35.0 34.0 35.0 30.0 36.0 98-99 33.629719958527915 35.0 34.0 35.0 30.0 35.0 100-101 33.246210976298904 34.5 33.0 35.0 29.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 1.0 15 2.0 16 15.0 17 98.0 18 603.0 19 2249.0 20 6508.0 21 13609.0 22 23272.0 23 34712.0 24 51521.0 25 75256.0 26 106963.0 27 144465.0 28 158245.0 29 136195.0 30 163139.0 31 198866.0 32 246317.0 33 321258.0 34 438230.0 35 621612.0 36 951644.0 37 1663882.0 38 2243087.0 39 1213198.0 40 60120.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.61527648185642 20.326178946029366 14.757511126394876 24.301033445719337 2 14.320133924220446 20.786804795129193 41.63272887798334 23.260332402667018 3 17.56758888577386 26.046319492083867 30.71160002055319 25.674491601589082 4 12.153638088800921 18.153931177418816 38.73927770787446 30.953153025905806 5 13.169904173931425 37.57145603207558 35.57607302639155 13.682566767601445 6 29.81784812554527 38.16275550815555 18.666933385684832 13.352462980614346 7 26.227550106702324 32.797212609526966 23.167021965407823 17.808215318362887 8 24.1423137391041 37.089182199323474 21.003511995647102 17.764992065925327 9 25.274055041091636 17.04034752736945 21.3393581686712 36.34623926286771 10-11 23.97453103673231 26.881123273242384 29.00273078698319 20.141614903042118 12-13 24.77232250931901 24.483682378542053 29.100619097422907 21.643376014716022 14-15 21.97074600223852 25.841592854493783 26.69554759654878 25.49211354671892 16-17 21.52760942986673 29.007195616163116 27.37647360329481 22.088721350675343 18-19 21.59254429106976 28.061466883934838 29.186110996169884 21.159877828825522 20-21 22.294290346230333 27.171868417000045 29.186468903404943 21.34737233336468 22-23 22.0711951272522 27.108622045504347 29.04640437349677 21.77377845374668 24-25 21.903325498128893 27.253515534500522 29.0445632947575 21.798595672613086 26-27 21.822970003512992 27.42440313297069 29.008091861663775 21.74453500185254 28-29 21.785662412199795 27.322193378155756 29.094559558217814 21.797584651426636 30-31 22.03375758552658 27.236547707403663 28.975654650470645 21.75404005659911 32-33 21.785439695109158 27.439677551539393 28.928948573457813 21.845934179893643 34-35 21.987821407986356 27.39390954543619 28.9434511174992 21.67481792907825 36-37 21.928965396188595 27.32409478843522 28.861921612550162 21.885018202826018 38-39 21.833958202714427 27.39277023642643 28.970146105961497 21.80312545489765 40-41 22.04210883988625 27.28357910207679 28.8201192098558 21.85419284818116 42-43 21.938458808938226 27.38721839300261 28.665070437031538 22.00925236102762 44-45 22.00722529537495 27.49948472189454 28.500793601371505 21.992496381359004 46-47 22.153518874860826 27.480070157436415 28.1799980490185 22.18641291868426 48-49 22.04095829828927 27.567776696669505 28.153522111429464 22.237742893611763 50-51 22.063183038623542 27.708983346067463 28.02582778626453 22.20200582904447 52-53 22.180309759871715 27.693865149011327 27.968149028683527 22.15767606243344 54-55 22.165684673587744 27.628961980481147 27.93821559239669 22.267137753534417 56-57 22.156245036138145 27.74683825051747 27.917804103082105 22.179112610262276 58-59 22.087888980382335 27.783274343521434 27.96833308415339 22.16050359194284 60-61 22.21147830470953 27.786816339151716 27.89142820416236 22.110277151976394 62-63 22.15747698277376 27.90627585134328 27.86083147486229 22.075415691020673 64-65 22.179472908222266 27.79783382000307 27.81802614858763 22.20466712318703 66-67 22.17773572899855 27.813028480398792 27.738402262913457 22.270833527689195 68-69 22.125822682395448 27.77202904225228 27.814562392265362 22.2875858830869 70-71 22.150555046320676 27.566620957008297 27.89741021722824 22.38541377944279 72-73 22.21475980794372 27.623016694458375 27.794350070992056 22.367873426605847 74-75 22.086099846827167 27.782994708331394 27.761504168990513 22.36940127585093 76-77 22.21527761056902 27.72562968862739 27.738947020421172 22.320145680382414 78-79 22.15018361437686 27.700829207255882 27.708901596009 22.440085582358254 80-81 22.158637142491123 27.754548724742957 27.719067144692573 22.367746988073353 82-83 22.209570953407066 27.730452718591568 27.76623873400631 22.293737593995047 84-85 22.222455204705117 27.73739061737181 27.731396613493708 22.308757564429364 86-87 22.164621621721924 27.699310876807132 27.817792733188938 22.318274768282006 88-89 22.1813076797492 27.71190182780921 27.773128088108074 22.333662404333516 90-91 22.195096015476057 27.77417885690548 27.76137611178659 22.269349015831878 92-93 22.201000036453422 27.7346445129427 27.79710335033581 22.267252100268063 94-95 22.06609518338532 27.761692145743588 27.816913143953197 22.355299526917896 96-97 22.138143014732993 27.75540598792562 27.815648646326785 22.290802351014598 98-99 22.39030831371481 28.314224395915133 27.887394298074575 21.40807299229548 100-101 23.028413794647825 30.94821758599961 25.042774996868417 20.980593622484147 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 3201.0 1 2518.0 2 2580.0 3 3353.5 4 3942.5 5 5849.5 6 7790.0 7 10051.5 8 12074.5 9 12061.0 10 10180.0 11 8260.0 12 8753.5 13 11945.0 14 20050.0 15 31238.0 16 40320.0 17 45444.0 18 46575.5 19 44571.5 20 40753.5 21 37334.5 22 36518.5 23 40357.5 24 48948.5 25 61494.0 26 76951.0 27 93516.5 28 112169.5 29 132621.5 30 152132.0 31 172084.0 32 193057.0 33 214571.5 34 235016.5 35 253265.0 36 273823.5 37 291180.0 38 304548.5 39 318588.5 40 331072.0 41 342120.5 42 348982.0 43 354090.5 44 360566.0 45 366266.5 46 368209.5 47 365435.0 48 360733.0 49 355615.5 50 348787.5 51 338719.0 52 324633.0 53 307177.0 54 289101.5 55 270422.0 56 249558.5 57 227022.5 58 203126.5 59 176383.5 60 148702.5 61 122445.0 62 98418.0 63 77044.5 64 58367.5 65 43857.5 66 33218.5 67 25811.5 68 20161.0 69 15365.5 70 11537.0 71 8496.5 72 6224.5 73 4460.0 74 3109.5 75 2144.5 76 1487.5 77 1012.0 78 688.0 79 475.0 80 339.5 81 243.5 82 186.5 83 135.0 84 90.0 85 66.0 86 54.0 87 43.0 88 31.5 89 25.0 90 19.0 91 13.0 92 10.5 93 5.5 94 1.0 95 1.5 96 2.0 97 1.5 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content warn #Base N-Count 1 0.0 2 1.7320094597595714 3 0.005983053423709365 4 8.5799915651341 5 3.267580965867638E-4 6 0.07670928005388579 7 0.025374456328048002 8 6.309811520296128E-4 9 2.816880142989343E-4 10-11 0.29054991922877876 12-13 0.304504743457148 14-15 7.323888371772292E-5 16-17 1.183089660055524E-4 18-19 0.4738048738110935 20-21 2.1975567451412302E-4 22-23 1.6909214315611386E-4 24-25 0.16620773514120496 26-27 0.1497978175122528 28-29 1.3547980766609105E-4 30-31 1.0173180309108694E-4 32-33 7.929239916088253E-5 34-35 3.9186332715817306E-4 36-37 2.9643887410463345E-4 38-39 0.0015186903502128603 40-41 0.0017410001677009765 42-43 9.978994796128267E-4 44-45 8.185911403296173E-4 46-47 0.0012746722100744781 48-49 0.0024172525626449458 50-51 3.4216345148077235E-4 52-53 0.001487922694794938 54-55 4.0227553863018473E-4 56-57 0.008623774116372024 58-59 1.1782032400589103E-4 60-61 0.0025157281509166542 62-63 0.0014712218895590982 64-65 0.0014336411477692797 66-67 0.004702922618715985 68-69 0.0018910574169221435 70-71 0.0024098607034849606 72-73 0.003508523390509663 74-75 7.098725457328691E-4 76-77 3.719911244270407E-4 78-79 8.407243599063063E-4 80-81 4.6295128681455997E-4 82-83 0.0015507265712806835 84-85 2.1886185340971943E-4 86-87 3.711242495439454E-4 88-89 1.4435028154800665E-4 90-91 2.9943581180736755E-4 92-93 0.0 94-95 0.0 96-97 3.0410217103101435E-5 98-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 986.0 20-21 2468.0 22-23 3151.0 24-25 4000.0 26-27 5284.0 28-29 8277.0 30-31 17614.0 32-33 22385.0 34-35 30029.0 36-37 43465.0 38-39 51141.0 40-41 53612.0 42-43 62656.0 44-45 77363.0 46-47 76497.0 48-49 70722.0 50-51 63490.0 52-53 62255.0 54-55 67407.0 56-57 71106.0 58-59 72900.0 60-61 72127.0 62-63 70783.0 64-65 74250.0 66-67 77427.0 68-69 79325.0 70-71 77377.0 72-73 72788.0 74-75 72853.0 76-77 76101.0 78-79 79255.0 80-81 78864.0 82-83 76249.0 84-85 75848.0 86-87 77454.0 88-89 80530.0 90-91 84081.0 92-93 84949.0 94-95 93009.0 96-97 145239.0 98-99 729613.0 100-101 5730137.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 87.60176608870833 #Duplication Level Percentage of deduplicated Percentage of total 1 91.48708664300983 80.14430364238339 2 6.076304096729433 10.645899403311038 3 1.3682828482492293 3.595919820465618 4 0.47934291452379235 1.6796514349757188 5 0.23636899436958914 1.0353170677693984 6 0.11768819458196705 0.6185816215903122 7 0.07185990030210442 0.4406537924195997 8 0.04292510796942743 0.30082522141362655 9 0.03064665979734933 0.24162313706708555 >10 0.08800834299280824 1.169524078058919 >50 0.001262024267808729 0.07663896162672644 >100 1.8555414756208402E-4 0.02974413233109581 >500 3.87190590524798E-5 0.021317686587389462 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 1.1267520571957373E-5 0.0 3 0.0 0.0 0.0 1.1267520571957373E-5 0.0 4 0.0 5.6337602859786864E-5 0.0 1.1267520571957373E-5 0.0 5 0.0 5.6337602859786864E-5 0.0 3.380256171587212E-5 0.0 6 2.2535041143914746E-5 5.6337602859786864E-5 0.0 3.380256171587212E-5 4.507008228782949E-5 7 2.2535041143914746E-5 5.6337602859786864E-5 0.0 3.380256171587212E-5 4.507008228782949E-5 8 2.2535041143914746E-5 6.760512343174424E-5 0.0 3.380256171587212E-5 4.507008228782949E-5 9 2.2535041143914746E-5 1.0140768514761635E-4 0.0 4.507008228782949E-5 4.507008228782949E-5 10-11 2.8168801429893432E-5 1.0140768514761635E-4 0.0 7.88726440037016E-5 4.507008228782949E-5 12-13 3.380256171587212E-5 1.0140768514761635E-4 0.0 7.88726440037016E-5 4.507008228782949E-5 14-15 4.507008228782949E-5 1.5211152772142452E-4 0.0 8.45064042896803E-5 5.6337602859786864E-5 16-17 6.760512343174424E-5 1.577452880074032E-4 0.0 9.014016457565898E-5 6.760512343174424E-5 18-19 6.760512343174424E-5 1.690128085793606E-4 0.0 9.577392486163767E-5 6.760512343174424E-5 20-21 6.760512343174424E-5 1.8028032915131797E-4 0.0 1.0704144543359503E-4 7.88726440037016E-5 22-23 6.760512343174424E-5 2.1971665115316877E-4 0.0 1.690128085793606E-4 1.0140768514761635E-4 24-25 7.323888371772292E-5 2.647867334409983E-4 0.0 2.3661793201110482E-4 1.3521024686348847E-4 26-27 7.88726440037016E-5 2.816880142989343E-4 0.0 3.549268980166572E-4 1.3521024686348847E-4 28-29 7.88726440037016E-5 2.816880142989343E-4 0.0 0.0013239336672049911 1.3521024686348847E-4 30-31 9.014016457565898E-5 3.154905760148064E-4 0.0 0.004326727899631631 1.3521024686348847E-4 32-33 1.295764865775098E-4 3.267580965867638E-4 0.0 0.011802727799125348 1.4084400714946716E-4 34-35 1.4084400714946716E-4 3.9436322001850803E-4 0.0 0.02312095221365653 1.4647776743544584E-4 36-37 1.4647776743544584E-4 4.507008228782949E-4 0.0 0.03932364679613123 1.577452880074032E-4 38-39 1.4647776743544584E-4 4.901371448801457E-4 0.0 0.0604502478685513 1.577452880074032E-4 40-41 1.4647776743544584E-4 6.535161931735276E-4 0.0 0.07977967940974418 1.633790482933819E-4 42-43 1.4647776743544584E-4 6.535161931735276E-4 0.0 0.09660772138396251 1.6901280857936057E-4 44-45 1.4647776743544584E-4 7.042200357473357E-4 0.0 0.11583011147972178 1.8028032915131797E-4 46-47 1.4647776743544584E-4 7.549238783211439E-4 0.0 0.13309758675624644 1.9154784972327533E-4 48-49 1.4647776743544584E-4 7.605576386071226E-4 0.0 0.14788620750694054 2.028153702952327E-4 50-51 1.4647776743544584E-4 8.450640428968029E-4 0.0 0.1595480912989164 2.028153702952327E-4 52-53 1.4647776743544584E-4 8.450640428968029E-4 0.0 0.1687536556062056 2.1408289086719006E-4 54-55 1.4647776743544584E-4 8.506978031827817E-4 0.0 0.17777893958434343 2.3098417172512614E-4 56-57 1.4647776743544584E-4 8.78866604612675E-4 0.0 0.18433100279693665 2.3661793201110482E-4 58-59 1.4647776743544584E-4 8.845003648986537E-4 0.0 0.1899985656446312 2.3661793201110482E-4 60-61 1.633790482933819E-4 9.014016457565898E-4 0.0 0.1949619084565784 2.3661793201110482E-4 62-63 1.8028032915131797E-4 9.014016457565898E-4 0.0 0.19962102821308278 2.591529731550196E-4 64-65 1.8028032915131797E-4 9.69006769188334E-4 0.0 0.20428578172987313 2.591529731550196E-4 66-67 1.8028032915131797E-4 0.0010366118926200783 0.0 0.2093730672681119 2.647867334409983E-4 68-69 1.8028032915131797E-4 0.001059146933763993 0.0 0.21442655024463475 2.7042049372697695E-4 70-71 1.8028032915131797E-4 0.0010704144543359504 0.0 0.2193391892140082 2.7042049372697695E-4 72-73 1.8028032915131797E-4 0.0010873157351938864 0.0 0.22315887868790174 3.267580965867638E-4 74-75 1.8028032915131797E-4 0.00111548453662378 0.0 0.2262405455643321 3.267580965867638E-4 76-77 1.8028032915131797E-4 0.001205624701199439 0.0 0.22897291930303174 3.267580965867638E-4 78-79 1.8028032915131797E-4 0.001239427262915311 0.0 0.2314686751097203 3.267580965867638E-4 80-81 1.8028032915131797E-4 0.001239427262915311 0.0 0.2327644399754954 3.323918568727425E-4 82-83 1.8591408943729665E-4 0.001239427262915311 0.0 0.23319260575722978 3.4929313773067857E-4 84-85 1.9154784972327533E-4 0.0012506947834872682 0.0 0.2335249976141025 3.549268980166572E-4 86-87 1.9718161000925401E-4 0.0012619623040592257 0.0 0.2336320390595361 3.6056065830263593E-4 88-89 2.028153702952327E-4 0.0013352011877769488 0.0 0.2337109117035398 3.6056065830263593E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 10450 0.0 57.821617 1 GTATCAA 19375 0.0 41.7027 1 TCAACGC 24105 0.0 32.680847 4 ATCAACG 24150 0.0 32.62156 3 TATCAAC 25015 0.0 31.738472 2 CAACGCA 24890 0.0 29.862545 5 AACGCAG 25860 0.0 28.800774 6 ACGCAGA 29290 0.0 25.450737 7 CGCAGAG 30250 0.0 24.651941 8 GTGGTAT 4875 0.0 23.828344 1 GCAGAGT 34730 0.0 21.17448 9 TGGTATC 5000 0.0 21.171677 2 GTACATG 22560 0.0 20.118773 1 GAGTACT 21335 0.0 19.861574 12-13 TACATGG 22980 0.0 19.506474 2 AGAGTAC 31395 0.0 19.366941 10-11 CAGAGTA 33715 0.0 19.180912 10-11 ACATGGG 23445 0.0 18.473413 3 GTACTTT 23900 0.0 17.710155 14-15 AGTACTT 23530 0.0 17.52502 12-13 >>END_MODULE