##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138733_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 12921414 Sequences flagged as poor quality 0 Sequence length 19-101 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.766642799309736 33.0 31.0 34.0 30.0 34.0 2 31.463295735280983 33.0 31.0 34.0 28.0 34.0 3 31.788237726923693 33.0 31.0 34.0 30.0 34.0 4 32.96134618084368 37.0 35.0 37.0 26.0 37.0 5 34.414062114254676 37.0 35.0 37.0 28.0 37.0 6 35.094884275049154 37.0 35.0 37.0 32.0 37.0 7 35.23785709520645 37.0 35.0 37.0 32.0 37.0 8 35.38635469771342 37.0 35.0 37.0 32.0 37.0 9 37.135203391826934 39.0 37.0 39.0 33.0 39.0 10-11 37.01397281288255 39.0 37.0 39.0 33.0 39.0 12-13 36.90234946423046 39.0 37.0 39.0 32.0 39.0 14-15 38.247365884260034 40.0 38.0 41.0 32.0 41.0 16-17 38.239786760179655 40.0 38.0 41.0 32.0 41.0 18-19 38.17195765107441 40.0 38.0 41.0 32.0 41.0 20-21 38.23505093250873 40.0 38.0 41.0 32.0 41.0 22-23 38.280508804290434 40.0 38.0 41.0 32.0 41.0 24-25 38.16342264501954 40.0 38.0 41.0 32.0 41.0 26-27 38.07293977158054 40.0 38.0 41.0 32.0 41.0 28-29 38.082218240751565 40.0 38.0 41.0 32.0 41.0 30-31 38.032936999308895 40.0 37.0 41.0 32.0 41.0 32-33 37.926330800416295 40.0 37.0 41.0 31.5 41.0 34-35 37.81273122314683 40.0 37.0 41.0 31.0 41.0 36-37 37.76482332861833 40.0 37.0 41.0 31.0 41.0 38-39 37.69223137413909 40.0 37.0 41.0 31.0 41.0 40-41 37.61563316232944 40.0 37.0 41.0 31.0 41.0 42-43 37.589717552617515 40.0 37.0 41.0 31.0 41.0 44-45 37.5241516056201 40.0 36.0 41.0 30.5 41.0 46-47 37.38784255170682 40.0 36.0 41.0 30.0 41.0 48-49 37.56072853755043 40.0 36.0 41.0 31.0 41.0 50-51 37.506546229231645 40.0 36.0 41.0 30.0 41.0 52-53 37.44498186951926 40.0 36.0 41.0 30.0 41.0 54-55 37.315748026265965 39.0 36.0 41.0 30.0 41.0 56-57 37.179416323572525 39.0 35.0 41.0 30.0 41.0 58-59 37.07164748600532 39.0 35.0 41.0 30.5 41.0 60-61 36.859356384549955 39.0 35.0 41.0 30.0 41.0 62-63 36.6748176769468 38.5 35.0 40.5 30.0 41.0 64-65 36.41523962206118 38.0 35.0 40.0 30.0 41.0 66-67 36.19712723741114 37.5 34.5 40.0 30.0 41.0 68-69 35.942712098225996 37.0 34.0 40.0 30.0 41.0 70-71 35.69529147914438 36.5 34.0 39.0 30.0 41.0 72-73 35.39217532301248 36.0 34.0 39.0 30.0 41.0 74-75 35.21316888853282 36.0 34.0 39.0 30.0 40.0 76-77 35.02337432686669 35.0 34.0 37.5 30.0 40.0 78-79 34.77087668944452 35.0 34.0 37.0 30.0 39.0 80-81 34.5241391320385 35.0 34.0 37.0 30.0 39.0 82-83 34.28040645152892 35.0 34.0 36.0 30.0 38.5 84-85 34.07363861506444 35.0 34.0 36.0 30.0 37.0 86-87 33.8913287731583 35.0 34.0 36.0 29.0 37.0 88-89 33.75731355792569 35.0 34.0 35.0 29.0 36.5 90-91 33.62877396724032 35.0 34.0 35.0 29.0 36.0 92-93 33.58838649670744 35.0 34.0 35.0 29.0 36.0 94-95 33.5669578945304 35.0 34.0 35.0 29.0 36.0 96-97 33.57499524700847 35.0 34.0 35.0 30.0 36.0 98-99 33.6081292565147 35.0 34.0 35.0 30.0 35.0 100-101 33.22098319204905 34.5 33.0 35.0 29.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 12.0 17 122.0 18 689.0 19 2823.0 20 7405.0 21 16234.0 22 28532.0 23 45027.0 24 69809.0 25 104747.0 26 154843.0 27 216489.0 28 240444.0 29 203547.0 30 239396.0 31 294921.0 32 367509.0 33 479044.0 34 651853.0 35 921530.0 36 1409278.0 37 2440695.0 38 3217153.0 39 1723792.0 40 85520.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.26825547111175 20.403850538338915 14.628399028155897 24.699494962393434 2 14.249557329406958 20.760183235764853 41.77745184041767 23.212807594410524 3 17.599217123231266 25.99771279121821 30.723315845948378 25.679754239602147 4 12.129767120433858 18.366883741011023 38.48248012895855 31.020869009596574 5 13.220399505563341 37.51166671774484 35.55406500176607 13.713868774925759 6 29.668995084485694 38.10324407834958 18.68734206273159 13.54041877443313 7 26.057967025055866 32.73689961706656 23.0145488076796 18.19058455019797 8 23.997120112483707 37.09986535450122 21.15982880410682 17.74318572890826 9 25.129804267006193 16.979543513083513 21.219710467412995 36.67094175249729 10-11 24.00041806672317 26.805012391805054 28.9704326850867 20.224136856385076 12-13 24.893175630271934 24.298994427945235 28.928765950099926 21.879063991682905 14-15 22.015605576080066 25.644382225557944 26.536525782370298 25.803486415991696 16-17 21.68118593063838 28.877486268608816 27.151937486013995 22.289390314738814 18-19 21.7368286471665 27.82561293873855 28.979931448352257 21.457626965742683 20-21 22.434573141356136 26.994026462090243 28.893821900113565 21.67757849644006 22-23 22.12786094167283 27.150816452960164 28.72451656038151 21.9968060449855 24-25 21.995033211167193 27.28980047930028 28.852191075087237 21.86297523444529 26-27 21.997026178891304 27.446362074398916 28.81879192339303 21.737819823316755 28-29 21.850403553036088 27.25092629231895 28.959208867098546 21.93946128754642 30-31 22.132186137920872 27.410879569789298 28.66832221894621 21.78861207334362 32-33 22.255825853298873 27.249244346201824 28.66945569975475 21.825474100744554 34-35 22.11062286283018 27.241519528375203 28.769800016024995 21.878057592769622 36-37 21.95020266230862 27.42775942995934 28.693561791542482 21.928476116189557 38-39 21.871107250870256 27.233664544676046 28.897796894711064 21.99743130974263 40-41 22.110800940900994 27.12421187815004 28.78117237683676 21.983814804112207 42-43 22.16319957226147 27.137869191859536 28.605791872569135 22.09313936330986 44-45 22.053957951600182 27.39724265434413 28.405838146724925 22.142961247330764 46-47 22.33208370032453 27.185893840848706 28.04112449037941 22.440897968447352 48-49 22.20282155107936 27.338882113596476 27.9933221407959 22.464974194528263 50-51 22.05889054908823 27.480450918873274 28.051653793562824 22.409004738475673 52-53 22.213131401460657 27.456349985219035 28.103005623088883 22.227512990231418 54-55 22.21264189738063 27.384453357817666 27.981208736037516 22.42169600876418 56-57 22.374405352465427 27.56127693406027 27.751601365778072 22.312716347696234 58-59 22.09875308255578 27.830636087246752 27.979402770474344 22.091208059723122 60-61 22.347020857151115 27.93569951510696 27.63464719541451 22.082632432327415 62-63 22.17950345777617 28.199012585748672 27.55831083807589 22.063173118399266 64-65 22.165629752110252 28.07301665715659 27.580676953477457 22.1806766372557 66-67 22.23095091866422 28.007305643652785 27.504393318080755 22.257350119602233 68-69 22.19204424456 27.855271397230837 27.638150738279855 22.31453361992931 70-71 22.25548560686424 27.51307567305639 27.741685513368058 22.48975320671131 72-73 22.325373391940136 27.516303639676092 27.67577712090613 22.482545847477635 74-75 22.17914314727292 27.63278519531974 27.703308587990318 22.484763069417024 76-77 22.324170184904663 27.593059413899525 27.60992933657998 22.472841064615835 78-79 22.234634595754457 27.65174987151583 27.598281509410725 22.51533402331899 80-81 22.294718948222883 27.616410337759483 27.616621079414926 22.472249634602708 82-83 22.312368676562947 27.62574587643863 27.69501011259785 22.366875334400575 84-85 22.381417542477035 27.613913938757552 27.634996940125014 22.369671578640403 86-87 22.239356573057663 27.652563352240744 27.69214782811624 22.415932246585342 88-89 22.284752348101343 27.587949233267462 27.662268614511166 22.465029804120032 90-91 22.2765609737343 27.662534759986606 27.674203156722026 22.38670110955707 92-93 22.36835344568945 27.63056605894577 27.66464401014177 22.336436485223008 94-95 22.196024248925454 27.699972131856782 27.703779425778936 22.400224193438824 96-97 22.21297232758634 27.722943015068118 27.69703133839303 22.36705331895251 98-99 22.494823022281356 28.279366177538094 27.729041187264492 21.49676961291606 100-101 23.12980702917558 30.848183682140164 24.894697194770625 21.127312093913634 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 3979.0 1 3243.0 2 3537.5 3 4675.5 4 5735.5 5 8795.5 6 11676.0 7 14429.0 8 16766.5 9 16733.5 10 14467.0 11 12057.5 12 12752.0 13 17199.0 14 28370.5 15 44083.0 16 57291.0 17 65135.5 18 67058.5 19 63837.5 20 58377.0 21 53528.5 22 52380.0 23 58157.0 24 70212.0 25 88806.5 26 112075.0 27 136258.5 28 162806.0 29 191824.0 30 217720.0 31 243416.5 32 271546.5 33 300132.5 34 328987.5 35 355133.5 36 383080.0 37 410200.0 38 432296.0 39 450802.0 40 468416.5 41 485482.5 42 498535.0 43 512775.5 44 534581.5 45 555348.0 46 558370.0 47 552786.5 48 544576.5 49 532380.0 50 520659.5 51 505958.5 52 484795.0 53 460354.0 54 435539.5 55 407346.0 56 375904.5 57 340522.5 58 304192.0 59 265375.0 60 222993.0 61 182000.0 62 143871.5 63 111084.0 64 84452.5 65 63753.0 66 48796.0 67 37377.5 68 28479.0 69 21524.5 70 15854.0 71 11547.0 72 8341.5 73 5846.5 74 4049.0 75 2781.0 76 1922.5 77 1308.5 78 956.0 79 704.0 80 482.0 81 328.5 82 246.5 83 183.5 84 135.5 85 101.0 86 76.5 87 57.0 88 37.5 89 24.5 90 16.0 91 12.0 92 10.0 93 5.5 94 2.0 95 1.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content warn #Base N-Count 1 0.0 2 1.7732734203857257 3 0.006671096522408461 4 8.651769845003031 5 3.250418259178136E-4 6 0.07462031632141808 7 0.0250901333244179 8 5.88170923089377E-4 9 2.78607279358126E-4 10-11 0.2964304061459528 12-13 0.3094862528203183 14-15 5.417363765296894E-5 16-17 1.3543409413242235E-4 18-19 0.48592205156494483 20-21 2.631712162519682E-4 22-23 1.1613523762605173E-4 24-25 0.17047305003127075 26-27 0.14816854703003116 28-29 1.4344120887598694E-4 30-31 1.3585353808609303E-4 32-33 8.947013877713225E-5 34-35 3.93991742947304E-4 36-37 2.858747895834276E-4 38-39 0.0014686339168915423 40-41 0.0018421821927696687 42-43 0.0012601028546992145 44-45 0.0010048593389858412 46-47 0.0014727441312769227 48-49 0.0024644262930214322 50-51 3.880327080200004E-4 52-53 0.0015766665334057573 54-55 5.995819949132805E-4 56-57 0.00896599001214088 58-59 2.0057429969803326E-4 60-61 0.002778469643043759 62-63 0.0015784116421903433 64-65 0.0015327736206234208 66-67 0.004754826748497635 68-69 0.0022050655250265504 70-71 0.0026311297825896097 72-73 0.0037797855598597245 74-75 7.189586473075996E-4 76-77 4.1237418721282003E-4 78-79 8.952365316755764E-4 80-81 4.1669199148166615E-4 82-83 0.0016176407697393463 84-85 2.88874474542227E-4 86-87 4.901005384323723E-4 88-89 1.1517713090962591E-4 90-91 2.2809585378508342E-4 92-93 0.0 94-95 0.0 96-97 5.281627189056215E-5 98-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 1301.0 20-21 3175.0 22-23 4191.0 24-25 5522.0 26-27 7391.0 28-29 12108.0 30-31 26571.0 32-33 33516.0 34-35 44819.0 36-37 64681.0 38-39 77539.0 40-41 80177.0 42-43 93327.0 44-45 114129.0 46-47 112358.0 48-49 104415.0 50-51 94541.0 52-53 92350.0 54-55 100200.0 56-57 105955.0 58-59 108349.0 60-61 108761.0 62-63 111985.0 64-65 120121.0 66-67 128111.0 68-69 130815.0 70-71 121396.0 72-73 107298.0 74-75 108760.0 76-77 112178.0 78-79 116745.0 80-81 116635.0 82-83 112170.0 84-85 111543.0 86-87 114228.0 88-89 119221.0 90-91 122948.0 92-93 126043.0 94-95 137276.0 96-97 213359.0 98-99 1056222.0 100-101 8238984.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 84.37751708464737 #Duplication Level Percentage of deduplicated Percentage of total 1 89.67645070207854 75.6667625120517 2 7.009401208463402 11.828717404405372 3 1.758725685611996 4.45190719754803 4 0.687191023794671 2.319338894026047 5 0.3347523702378346 1.4122786919434547 6 0.17652053136633322 0.8936618490692287 7 0.10556250043638096 0.6234971178848181 8 0.06691859843678427 0.4517140146304337 9 0.0442853253409285 0.33630172159980254 >10 0.13704269712216358 1.7510789478536453 >50 0.0025693909870569812 0.14231407500827323 >100 5.173537838130548E-4 0.07204260317241808 >500 3.130990460109185E-5 0.01845260347243726 >1k 3.13024355367749E-5 0.0319323673343007 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 7.739091093281278E-6 0.0 7.739091093281278E-6 0.0 3 0.0 7.739091093281278E-6 0.0 7.739091093281278E-6 0.0 4 0.0 2.321727327984383E-5 0.0 1.5478182186562555E-5 0.0 5 0.0 3.095636437312511E-5 0.0 1.5478182186562555E-5 0.0 6 0.0 3.095636437312511E-5 0.0 1.5478182186562555E-5 0.0 7 7.739091093281278E-6 3.8695455466406386E-5 0.0 2.321727327984383E-5 0.0 8 7.739091093281278E-6 4.643454655968766E-5 0.0 3.095636437312511E-5 0.0 9 7.739091093281278E-6 9.286909311937532E-5 0.0 3.095636437312511E-5 0.0 10-11 2.7086818826484472E-5 9.286909311937532E-5 0.0 5.4173637652968945E-5 0.0 12-13 3.8695455466406386E-5 9.286909311937532E-5 0.0 9.286909311937532E-5 0.0 14-15 3.8695455466406386E-5 1.5478182186562552E-4 0.0 1.2382545749250044E-4 0.0 16-17 3.8695455466406386E-5 1.625209129589068E-4 0.0 1.4704273077234425E-4 0.0 18-19 4.2565001013047024E-5 1.7799909514546939E-4 0.0 1.702600040521881E-4 0.0 20-21 4.643454655968766E-5 1.9734682287867258E-4 0.0 1.8186864069211E-4 0.0 22-23 5.417363765296894E-5 2.2830318725179769E-4 0.0 2.0508591397195384E-4 3.869545546640639E-6 24-25 6.578227429289085E-5 2.5539000607828217E-4 0.0 2.824768249047666E-4 7.739091093281278E-6 26-27 6.96518198395315E-5 2.631290971715634E-4 0.0 4.17910919037189E-4 7.739091093281278E-6 28-29 6.96518198395315E-5 2.708681882648447E-4 0.0 0.0012034286650052385 1.1608636639921917E-5 30-31 7.739091093281277E-5 3.250418259178136E-4 0.0 0.004314543284504312 1.5478182186562555E-5 32-33 7.739091093281277E-5 3.250418259178136E-4 0.0 0.012007199831225902 1.5478182186562555E-5 34-35 9.286909311937532E-5 4.101718279439077E-4 0.0 0.023120534641177817 1.5478182186562555E-5 36-37 1.0834727530593788E-4 4.720845566901579E-4 0.0 0.03890054138037834 1.5478182186562555E-5 38-39 1.0834727530593788E-4 4.875627388767205E-4 0.0 0.05959487096381247 1.5478182186562555E-5 40-41 1.0834727530593788E-4 5.494754676229706E-4 0.0 0.07884199051280301 1.5478182186562555E-5 42-43 1.0834727530593788E-4 5.804318319960958E-4 0.0 0.09577125227935582 1.5478182186562555E-5 44-45 1.0834727530593788E-4 6.500836518356272E-4 0.0 0.11403937680504625 1.5478182186562555E-5 46-47 1.0834727530593788E-4 7.042572894885962E-4 0.0 0.13096476902605242 1.5478182186562555E-5 48-49 1.0834727530593788E-4 7.081268350352368E-4 0.0 0.14497252390489151 1.5478182186562555E-5 50-51 1.0834727530593788E-4 8.551695658075812E-4 0.0 0.15622903190006915 1.5478182186562555E-5 52-53 1.1608636639921915E-4 8.66778202447503E-4 0.0 0.16498194392657026 1.5478182186562555E-5 54-55 1.1608636639921915E-4 8.66778202447503E-4 0.0 0.1732782495785678 1.5478182186562555E-5 56-57 1.1608636639921915E-4 8.745172935407843E-4 0.0 0.1798990420088699 1.5478182186562555E-5 58-59 1.1608636639921915E-4 8.78386839087425E-4 0.0 0.18541701395837948 1.5478182186562555E-5 60-61 1.1608636639921915E-4 9.016041123672688E-4 0.0 0.1907144218117305 1.5478182186562555E-5 62-63 1.1608636639921915E-4 9.286909311937532E-4 0.0 0.19574870056791 1.5478182186562555E-5 64-65 1.1608636639921915E-4 0.00102929911540641 0.0 0.20069784932206336 1.5478182186562555E-5 66-67 1.2382545749250044E-4 0.0010409077520463317 0.0 0.2057282585326962 1.5478182186562555E-5 68-69 1.315645485857817E-4 0.0010447772975929724 0.0 0.21065032046802307 1.5478182186562555E-5 70-71 1.315645485857817E-4 0.0010563859342328941 0.0 0.21555690422116341 1.5478182186562555E-5 72-73 1.315645485857817E-4 0.0010718641164194568 0.0 0.219383884766791 1.5478182186562555E-5 74-75 1.315645485857817E-4 0.0011182986629791444 0.0 0.2225453034783964 1.5478182186562555E-5 76-77 1.315645485857817E-4 0.0011647332095388323 0.0 0.22536620218189743 1.5478182186562555E-5 78-79 1.315645485857817E-4 0.001176341846178754 0.0 0.22785431996838734 1.5478182186562555E-5 80-81 1.315645485857817E-4 0.0011840809372720355 0.0 0.2290384009056594 1.5478182186562555E-5 82-83 1.315645485857817E-4 0.0011918200283653167 0.0 0.22954918091781595 1.5478182186562555E-5 84-85 1.315645485857817E-4 0.0012072982105518792 0.0 0.22991678774474683 1.5478182186562555E-5 86-87 1.315645485857817E-4 0.0012072982105518792 0.0 0.23004448274778597 1.5478182186562555E-5 88-89 1.315645485857817E-4 0.0013001673036712545 0.0 0.23010639547653222 1.5478182186562555E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 14875 0.0 55.876785 1 GTATCAA 27640 0.0 41.400627 1 CTTATAC 12555 0.0 34.75517 1 TCAACGC 33935 0.0 33.01473 4 ATCAACG 34025 0.0 32.901745 3 TATCAAC 35185 0.0 32.032 2 CAACGCA 35280 0.0 30.304373 5 AACGCAG 36565 0.0 29.390808 6 TATACAC 17880 0.0 27.327242 3 ACGCAGA 41660 0.0 25.695044 7 TTATACA 18200 0.0 25.334366 2 CGCAGAG 42880 0.0 25.017902 8 GCAGAGT 49545 0.0 21.479378 9 GTACATG 32410 0.0 21.224768 1 TACATGG 31930 0.0 20.944588 2 ACATCTC 19965 0.0 20.823189 8 GTGGTAT 7315 0.0 19.905117 1 GAGTACT 31640 0.0 19.726137 12-13 ACACATC 21045 0.0 19.651579 6 ACATGGG 33135 0.0 19.530478 3 >>END_MODULE