##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138732_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 13379032 Sequences flagged as poor quality 0 Sequence length 19-101 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.799214322829933 33.0 31.0 34.0 30.0 34.0 2 31.473461233966702 33.0 31.0 34.0 29.0 34.0 3 31.794902725398966 33.0 31.0 34.0 30.0 34.0 4 32.959743275896194 37.0 35.0 37.0 26.0 37.0 5 34.4174550894265 37.0 35.0 37.0 28.0 37.0 6 35.091468351372505 37.0 35.0 37.0 32.0 37.0 7 35.245325670795914 37.0 35.0 37.0 32.0 37.0 8 35.387861020139574 37.0 35.0 37.0 32.0 37.0 9 37.15524665760572 39.0 37.0 39.0 33.0 39.0 10-11 37.02360708906295 39.0 37.0 39.0 33.0 39.0 12-13 36.9170333474051 39.0 37.0 39.0 32.0 39.0 14-15 38.266726957525776 40.0 38.0 41.0 32.0 41.0 16-17 38.25635707426367 40.0 38.0 41.0 32.5 41.0 18-19 38.187646946356054 40.0 38.0 41.0 32.0 41.0 20-21 38.25126544268437 40.0 38.0 41.0 32.0 41.0 22-23 38.29147738832718 40.0 38.0 41.0 32.0 41.0 24-25 38.172607207653996 40.0 38.0 41.0 32.0 41.0 26-27 38.07753901216298 40.0 38.0 41.0 32.0 41.0 28-29 38.08101043586089 40.0 38.0 41.0 32.0 41.0 30-31 38.03487182306719 40.0 37.0 41.0 32.0 41.0 32-33 37.931697018186476 40.0 37.0 41.0 31.5 41.0 34-35 37.81787588277709 40.0 37.0 41.0 31.0 41.0 36-37 37.77199639905034 40.0 37.0 41.0 31.0 41.0 38-39 37.69655771492013 40.0 37.0 41.0 31.0 41.0 40-41 37.610415392945384 40.0 37.0 41.0 31.0 41.0 42-43 37.58631907197141 40.0 37.0 41.0 31.0 41.0 44-45 37.51957004984472 40.0 36.0 41.0 30.5 41.0 46-47 37.38349747648154 40.0 36.0 41.0 30.0 41.0 48-49 37.55906038668935 40.0 36.0 41.0 31.0 41.0 50-51 37.5031367937862 40.0 36.0 41.0 30.0 41.0 52-53 37.440644178281794 40.0 36.0 41.0 30.0 41.0 54-55 37.30940081581693 39.0 36.0 41.0 30.0 41.0 56-57 37.162518993903916 39.0 35.0 41.0 30.0 41.0 58-59 37.05083308012068 39.0 35.0 41.0 30.5 41.0 60-61 36.83229424820628 39.0 35.0 41.0 30.0 41.0 62-63 36.64529056969691 38.5 35.0 40.5 30.0 41.0 64-65 36.38889261319841 38.0 35.0 40.0 30.0 41.0 66-67 36.16414481340489 37.0 34.5 40.0 30.0 41.0 68-69 35.90966365512705 37.0 34.0 40.0 30.0 41.0 70-71 35.6585270017607 36.5 34.0 39.0 30.0 41.0 72-73 35.35408893133873 36.0 34.0 39.0 30.0 41.0 74-75 35.17989476854633 36.0 34.0 39.0 30.0 40.0 76-77 34.98781801700404 35.0 34.0 37.5 30.0 39.5 78-79 34.73553000869719 35.0 34.0 37.0 30.0 39.0 80-81 34.48755823432869 35.0 34.0 37.0 30.0 39.0 82-83 34.245637439052835 35.0 34.0 36.0 30.0 38.5 84-85 34.03911625492923 35.0 34.0 36.0 29.0 37.0 86-87 33.860381262777835 35.0 34.0 36.0 29.0 37.0 88-89 33.728190272261514 35.0 34.0 35.0 29.0 36.5 90-91 33.60195004758694 35.0 34.0 35.0 29.0 36.0 92-93 33.56382008146079 35.0 34.0 35.0 29.0 36.0 94-95 33.54533639697132 35.0 34.0 35.0 29.0 36.0 96-97 33.55262670264425 35.0 34.0 35.0 29.5 36.0 98-99 33.588254769556 35.0 34.0 35.0 30.0 35.0 100-101 33.19963825358974 34.5 33.0 35.0 29.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 1.0 15 0.0 16 10.0 17 101.0 18 704.0 19 2395.0 20 6792.0 21 14804.0 22 26883.0 23 43695.0 24 69120.0 25 106918.0 26 160171.0 27 226866.0 28 250698.0 29 210075.0 30 249975.0 31 305677.0 32 382053.0 33 498182.0 34 680269.0 35 963612.0 36 1477256.0 37 2552541.0 38 3327271.0 39 1738521.0 40 84442.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.20617485629753 20.34093348457497 14.631200523326351 24.821691135801156 2 14.243902372209453 20.701466133556707 41.69585155549928 23.35877993873456 3 17.618950730689498 25.872894875284285 30.727626301503058 25.78052809252316 4 12.15620912999995 18.2576346592332 38.31178152688274 31.274374683884105 5 13.228217720285615 37.42708246209745 35.55192498562858 13.79277483198835 6 29.858954276154424 38.033755409343314 18.572446491502205 13.534843823000047 7 26.138040363574817 32.67929032694101 22.981387634700255 18.20128167478392 8 24.17406242808197 37.09117765396634 20.99465675437686 17.74010316357483 9 25.167611593006562 16.886385429341228 21.11689687948955 36.82910609816267 10-11 24.02294419519995 26.798039619535814 28.851843820998997 20.32717236426524 12-13 24.821955997004245 24.291059993040292 28.877430325991003 22.00955368396446 14-15 21.99840870258061 25.704853569244985 26.420302084906073 25.87643564326834 16-17 21.73552599085015 28.951325717825586 27.06937117049565 22.243777120828618 18-19 21.76178054232617 27.90061173493519 28.77479986704614 21.562807855692494 20-21 22.462375582478998 27.048446531428667 28.74736081214716 21.741817073945178 22-23 22.17540530757255 27.228749546962227 28.584655047115554 22.01119009834967 24-25 22.078331564552364 27.370722541937383 28.656132457348725 21.89481343616153 26-27 22.009725459605594 27.553753825573164 28.586048222879356 21.850472491941886 28-29 21.882962333572216 27.318251326699126 28.692161210188775 22.10662512953988 30-31 22.3685845530996 27.24739097297058 28.61251936390543 21.771505110024393 32-33 22.240597436357135 27.30195100676604 28.64993372790462 21.807517828972205 34-35 22.210454522686966 27.396036818563392 28.716506025139992 21.67700263360965 36-37 22.21838774724221 27.231343463831436 28.55574424280356 21.994524546122793 38-39 21.971354694150453 27.2172390549056 28.745564458017437 22.065841792926516 40-41 22.118568608085713 27.05926733920775 28.742790327170663 22.079373725535866 42-43 22.124594724585727 27.135669272962915 28.60618706048307 22.13354894196829 44-45 22.021481969054214 27.3293942208376 28.42626242342035 22.22286138668784 46-47 22.337801728440162 27.13786197505893 27.998854001135992 22.52548229536491 48-49 22.224294212411106 27.30031017180714 28.04883206564191 22.426563550139843 50-51 22.111981583883292 27.491514439873576 28.01690088068029 22.379603095562846 52-53 22.21036381444771 27.551905365931074 28.034653850249292 22.20307696937192 54-55 22.16516545256543 27.496474556259514 27.895120189474344 22.443239801700717 56-57 22.320627376074547 27.700806004774353 27.633080176439673 22.345486442711426 58-59 22.081354083903545 27.85099365714505 27.942078656513054 22.125573602438347 60-61 22.31829891919092 27.96794064002927 27.579187320500637 22.13457312027917 62-63 22.11671454054765 28.20351647625084 27.56350941705174 22.116259566149772 64-65 22.107970690153657 28.072038059305825 27.563174384819433 22.256816865721085 66-67 22.195871640993058 28.074967581075423 27.401522032516212 22.327638745415307 68-69 22.17437830524642 27.892850915251294 27.525732935055373 22.40703784444691 70-71 22.238916377781603 27.572258892561518 27.604946004595458 22.583878725061425 72-73 22.289533314101874 27.565006375009084 27.571828405454983 22.573631905434063 74-75 22.197940513405822 27.636953848337807 27.57894784591955 22.586157792336824 76-77 22.37675775729423 27.614033092206324 27.47746363643388 22.531745514065562 78-79 22.256568708801904 27.657363526256106 27.473272815812805 22.612794949129185 80-81 22.293805328584636 27.646871929855894 27.470834075680532 22.58848866587894 82-83 22.391697114528583 27.624465209043546 27.58528016148584 22.398557514942027 84-85 22.447982486135224 27.644199083660435 27.518022788502222 22.38979564170212 86-87 22.29152267515734 27.690460493506492 27.540285435576944 22.477731395759225 88-89 22.338073478115753 27.609081902248878 27.528749440955764 22.52409517867961 90-91 22.378856924200786 27.684584235459692 27.533196079921286 22.403362760418236 92-93 22.43981749850702 27.65694958163539 27.5738158947752 22.329417025082392 94-95 22.282425134035744 27.729138245322616 27.588712606277028 22.399724014364615 96-97 22.26545657071973 27.71002253107516 27.656580846054528 22.36794005215058 98-99 22.533093560147847 28.259682182904257 27.703560728281428 21.503663528666475 100-101 23.223260911626177 30.856153421493353 24.83836385307146 21.08222181380901 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 3976.0 1 3220.0 2 3463.0 3 4555.5 4 5552.5 5 8555.0 6 11398.0 7 14002.0 8 15941.5 9 15762.0 10 13765.5 11 11523.0 12 12225.5 13 16536.5 14 27918.5 15 44026.0 16 57119.5 17 64810.5 18 66520.5 19 63069.0 20 57591.5 21 52779.5 22 51450.5 23 56774.5 24 68436.0 25 86068.0 26 109010.5 27 134045.5 28 161698.0 29 190655.5 30 219062.0 31 248441.0 32 279307.5 33 310227.5 34 339245.5 35 367168.5 36 397208.0 37 424189.0 38 445661.5 39 464761.0 40 482882.5 41 501376.5 42 514695.5 43 526747.0 44 541128.0 45 556708.5 46 576723.0 47 588314.5 48 587798.0 49 577151.0 50 555621.5 51 532746.5 52 504769.0 53 474362.0 54 446318.5 55 415080.0 56 381265.0 57 346166.0 58 308813.5 59 268199.5 60 224993.0 61 183891.5 62 147013.5 63 114976.5 64 88251.5 65 66891.0 66 51250.0 67 38662.5 68 28571.5 69 21717.0 70 16322.5 71 11815.5 72 8479.0 73 5942.5 74 4118.0 75 2806.5 76 1909.5 77 1280.5 78 896.0 79 693.0 80 520.0 81 372.5 82 293.0 83 209.5 84 146.5 85 104.5 86 74.0 87 52.0 88 31.5 89 17.5 90 8.5 91 5.0 92 5.5 93 5.0 94 4.0 95 4.0 96 4.0 97 3.5 98 1.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content warn #Base N-Count 1 0.0 2 1.775375079452684 3 0.006323327427574731 4 8.673362915941901 5 3.662447328027917E-4 6 0.07499795201924923 7 0.02547269488554927 8 6.353224956783122E-4 9 2.6160338057342267E-4 10-11 0.29355262772373963 12-13 0.30515286905659544 14-15 8.969258762517348E-5 16-17 1.1959011683356464E-4 18-19 0.47188765226064183 20-21 2.653804808544803E-4 22-23 1.9067367214200447E-4 24-25 0.1730912372322726 26-27 0.15261540211490643 28-29 1.2355390450930566E-4 30-31 1.3869160736600873E-4 32-33 1.164413276565056E-4 34-35 3.803711752313137E-4 36-37 2.9482951804407674E-4 38-39 0.0016375773156863038 40-41 0.001933342477864948 42-43 0.0012994788090376675 44-45 0.001053641835530848 46-47 0.0015553828047194223 48-49 0.0026014165185928558 50-51 3.4166191187172645E-4 52-53 0.0017166407876732228 54-55 5.5608919074234E-4 56-57 0.008812190971792583 58-59 1.9660362325732393E-4 60-61 0.002824435060262403 62-63 0.0015819501739122558 64-65 0.0017237318127855301 66-67 0.004966310441084183 68-69 0.002140847521473627 70-71 0.0026671972006632257 72-73 0.003809445796100404 74-75 7.827168993025814E-4 76-77 4.35748149249581E-4 78-79 7.85503224695059E-4 80-81 4.2692910901823014E-4 82-83 0.0017173914476319538 84-85 3.0501075420994616E-4 86-87 4.4128467744296496E-4 88-89 1.1519249866448696E-4 90-91 2.6235362489630956E-4 92-93 0.0 94-95 0.0 96-97 4.556844585625616E-5 98-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 1288.0 20-21 3152.0 22-23 4304.0 24-25 5612.0 26-27 7499.0 28-29 12181.0 30-31 26080.0 32-33 32605.0 34-35 43374.0 36-37 63993.0 38-39 73744.0 40-41 78586.0 42-43 91783.0 44-45 111665.0 46-47 111579.0 48-49 102595.0 50-51 92673.0 52-53 85494.0 54-55 93377.0 56-57 102360.0 58-59 115102.0 60-61 113981.0 62-63 112395.0 64-65 122048.0 66-67 130269.0 68-69 135421.0 70-71 125070.0 72-73 110303.0 74-75 111873.0 76-77 115945.0 78-79 120778.0 80-81 120427.0 82-83 117120.0 84-85 117187.0 86-87 119179.0 88-89 124337.0 90-91 128892.0 92-93 130713.0 94-95 144673.0 96-97 225557.0 98-99 1109518.0 100-101 8584300.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 84.5007034834809 #Duplication Level Percentage of deduplicated Percentage of total 1 89.53041236996229 75.65382828427956 2 7.208053225050463 12.18171136526275 3 1.7972766796160715 4.556134313460384 4 0.6661468405809313 2.251595066095476 5 0.309191369738119 1.3063444126946053 6 0.15586337339187142 0.7902338819352958 7 0.09515978427014728 0.5628748099914607 8 0.06641912770462317 0.4489970412639852 9 0.03809562656640806 0.2897196520054919 >10 0.1300925255127274 1.6976309981425672 >50 0.002613304897887194 0.14697501963717932 >100 6.457428984487427E-4 0.09110478428512539 >500 1.5015524400219332E-5 0.009275091561190834 >1k 1.5014285647662745E-5 0.013575279384964929 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 2.242314690629337E-5 0.0 7.47438230209779E-6 0.0 3 0.0 2.242314690629337E-5 0.0 7.47438230209779E-6 0.0 4 0.0 8.969258762517348E-5 0.0 1.494876460419558E-5 0.0 5 0.0 9.716696992727127E-5 0.0 2.989752920839116E-5 0.0 6 0.0 9.716696992727127E-5 0.0 5.232067611468453E-5 7.47438230209779E-6 7 0.0 9.716696992727127E-5 0.0 5.979505841678232E-5 7.47438230209779E-6 8 0.0 1.1959011683356464E-4 0.0 7.47438230209779E-5 7.47438230209779E-6 9 0.0 2.466546159692271E-4 0.0 1.0464135222936906E-4 2.242314690629337E-5 10-11 0.0 2.466546159692271E-4 0.0 1.3827607258880912E-4 2.242314690629337E-5 12-13 0.0 2.466546159692271E-4 0.0 1.5322483719300468E-4 2.242314690629337E-5 14-15 0.0 3.4008439474544943E-4 0.0 1.8685955755244475E-4 2.242314690629337E-5 16-17 0.0 3.587703505006939E-4 0.0 2.1675708676083591E-4 2.242314690629337E-5 18-19 0.0 3.774563062559384E-4 0.0 2.541289982713249E-4 2.242314690629337E-5 20-21 0.0 3.9987945316223176E-4 0.0 2.6907776287552046E-4 2.242314690629337E-5 22-23 0.0 4.409885558237696E-4 0.0 3.2139843899020495E-4 2.242314690629337E-5 24-25 0.0 4.746232761832097E-4 0.0 3.9987945316223176E-4 2.242314690629337E-5 26-27 0.0 5.045208053916009E-4 0.0 5.344183345999921E-4 2.242314690629337E-5 28-29 0.0 5.082579965426497E-4 0.0 0.0019470765896964742 2.242314690629337E-5 30-31 0.0 5.755274372615299E-4 0.0 0.006794213512606891 2.242314690629337E-5 32-33 0.0 5.755274372615299E-4 0.0 0.01906714925265146 2.242314690629337E-5 34-35 0.0 6.951175540950945E-4 0.0 0.03492031411540088 2.242314690629337E-5 36-37 0.0 8.147076709286591E-4 0.0 0.057313563492485856 2.242314690629337E-5 38-39 0.0 8.520795824391481E-4 0.0 0.09263375706104895 2.242314690629337E-5 40-41 0.0 9.903556550279573E-4 0.0 0.14573176893515166 2.989752920839116E-5 42-43 3.737191151048895E-6 0.0010277275665384461 0.0 0.17516588644081277 3.363472035944006E-5 44-45 7.47438230209779E-6 0.0011622664479762064 0.0 0.21145774970864858 3.737191151048895E-5 46-47 7.47438230209779E-6 0.0012556962267524286 0.0 0.248788552116476 3.737191151048895E-5 48-49 7.47438230209779E-6 0.0012669078002055753 0.0 0.2790261657196126 3.737191151048895E-5 50-51 7.47438230209779E-6 0.0013416516232265534 0.0 0.3043867448706304 3.737191151048895E-5 52-53 7.47438230209779E-6 0.0013528631966797 0.0 0.33721796913259494 4.110910266153784E-5 54-55 7.47438230209779E-6 0.0013752863435859933 0.0 0.40233478774847087 4.484629381258674E-5 56-57 7.47438230209779E-6 0.0013939722993412378 0.0 0.4698097739806587 4.484629381258674E-5 58-59 7.47438230209779E-6 0.0014051838727943845 0.0 0.510724542702342 4.484629381258674E-5 60-61 7.47438230209779E-6 0.0014350814020027756 0.0 0.5298739101603165 4.484629381258674E-5 62-63 7.47438230209779E-6 0.0014874020781174603 0.0 0.5419973582543192 5.232067611468453E-5 64-65 7.47438230209779E-6 0.0016518384887636117 0.0 0.551616888277119 5.232067611468453E-5 66-67 7.47438230209779E-6 0.001666787253367807 0.0 0.5581793959383609 5.232067611468453E-5 68-69 7.47438230209779E-6 0.0017041591648782961 0.0 0.5642635431322685 5.232067611468453E-5 70-71 7.47438230209779E-6 0.0017490054586908827 0.0 0.5700599266075452 5.232067611468453E-5 72-73 7.47438230209779E-6 0.001782640179050323 0.0 0.5742530550790221 5.979505841678232E-5 74-75 7.47438230209779E-6 0.0017975889436545184 0.0 0.5771867501325956 5.979505841678232E-5 76-77 7.47438230209779E-6 0.0018723327666754965 0.0 0.580198926200341 6.726944071888011E-5 78-79 7.47438230209779E-6 0.0019059674870349364 0.0 0.5827775880945647 7.47438230209779E-5 80-81 7.47438230209779E-6 0.0019134418693370343 0.0 0.58393611735139 7.47438230209779E-5 82-83 7.47438230209779E-6 0.0019209162516391322 0.0 0.5843247852310989 9.716696992727127E-5 84-85 7.47438230209779E-6 0.0019433393985454255 0.0 0.5846611324346933 9.716696992727127E-5 86-87 7.47438230209779E-6 0.001969499736602768 0.0 0.5847956713161311 9.716696992727127E-5 88-89 7.47438230209779E-6 0.0020479807507747944 0.0 0.5848405176099437 9.716696992727127E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 14620 0.0 55.798397 1 GTATCAA 27485 0.0 41.259174 1 ATCAACG 33440 0.0 33.11559 3 TCAACGC 33520 0.0 33.07649 4 TATCAAC 34840 0.0 32.118053 2 CAACGCA 34840 0.0 30.250217 5 AACGCAG 36330 0.0 29.179636 6 ACGCAGA 41465 0.0 25.494654 7 CTTATAC 18440 0.0 24.97051 1 CGCAGAG 43025 0.0 24.55489 8 TATACAC 23690 0.0 21.823465 3 GTACATG 34130 0.0 21.261433 1 GCAGAGT 49595 0.0 21.09354 9 TACATGG 33960 0.0 20.77363 2 GAGTACT 29830 0.0 20.03586 12-13 TTATACA 24395 0.0 19.817896 2 ACATGGG 34795 0.0 19.694767 3 GTGGTAT 7585 0.0 19.30716 1 AGAGTAC 44850 0.0 18.92912 10-11 CAGAGTA 48335 0.0 18.626259 10-11 >>END_MODULE