##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138731_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 9512069 Sequences flagged as poor quality 0 Sequence length 19-101 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.85740526062206 33.0 31.0 34.0 30.0 34.0 2 31.51680291637918 33.0 31.0 34.0 30.0 34.0 3 31.833271814996294 33.0 31.0 34.0 30.0 34.0 4 32.96330714169546 37.0 35.0 37.0 26.0 37.0 5 34.435915256712285 37.0 35.0 37.0 28.0 37.0 6 35.182366107731134 37.0 35.0 37.0 32.0 37.0 7 35.31386935902168 37.0 35.0 37.0 32.0 37.0 8 35.44682402955656 37.0 35.0 37.0 32.0 37.0 9 37.199774833424776 39.0 37.0 39.0 33.0 39.0 10-11 37.07012722468687 39.0 37.0 39.0 33.0 39.0 12-13 36.969423108684346 39.0 37.0 39.0 32.5 39.0 14-15 38.33001647696206 40.0 38.0 41.0 33.0 41.0 16-17 38.324004588276225 40.0 38.0 41.0 33.0 41.0 18-19 38.251069667387824 40.0 38.0 41.0 33.0 41.0 20-21 38.31588505869626 40.0 38.0 41.0 32.5 41.0 22-23 38.3621631096837 40.0 38.0 41.0 33.0 41.0 24-25 38.24209278692619 40.0 38.0 41.0 32.0 41.0 26-27 38.14343097804942 40.0 38.0 41.0 32.0 41.0 28-29 38.15530789114956 40.0 38.0 41.0 32.0 41.0 30-31 38.11054726051047 40.0 37.5 41.0 32.0 41.0 32-33 38.01071770733433 40.0 37.0 41.0 32.0 41.0 34-35 37.90096856445052 40.0 37.0 41.0 31.0 41.0 36-37 37.85816150731384 40.0 37.0 41.0 31.0 41.0 38-39 37.789260283266735 40.0 37.0 41.0 31.0 41.0 40-41 37.700612340251524 40.0 37.0 41.0 31.0 41.0 42-43 37.67445634170313 40.0 37.0 41.0 31.0 41.0 44-45 37.60771193224635 40.0 37.0 41.0 31.0 41.0 46-47 37.47404984275535 40.0 36.0 41.0 30.0 41.0 48-49 37.650357487770805 40.0 37.0 41.0 31.0 41.0 50-51 37.60385931547604 40.0 36.5 41.0 31.0 41.0 52-53 37.54486737680459 40.0 36.0 41.0 31.0 41.0 54-55 37.41307705296663 39.5 36.0 41.0 30.0 41.0 56-57 37.27562911959484 39.0 35.5 41.0 30.0 41.0 58-59 37.16901788348533 39.0 35.0 41.0 30.5 41.0 60-61 36.9479245169559 39.0 35.0 41.0 30.5 41.0 62-63 36.76342749938178 38.5 35.0 41.0 30.0 41.0 64-65 36.502981610207435 38.0 35.0 40.0 30.0 41.0 66-67 36.280464173226946 37.5 35.0 40.0 30.0 41.0 68-69 36.024905278295556 37.0 34.0 40.0 30.0 41.0 70-71 35.774276598843684 36.5 34.0 39.0 30.0 41.0 72-73 35.46655330402261 36.0 34.0 39.0 30.0 41.0 74-75 35.2855109619486 36.0 34.0 39.0 30.0 40.5 76-77 35.08550162246752 35.0 34.0 37.5 30.0 40.0 78-79 34.826129846617214 35.0 34.0 37.0 30.0 39.0 80-81 34.57006827439638 35.0 34.0 37.0 30.0 39.0 82-83 34.32172848439504 35.0 34.0 36.0 30.0 38.5 84-85 34.11045519197028 35.0 34.0 36.0 30.0 37.0 86-87 33.92344147194448 35.0 34.0 36.0 29.5 37.0 88-89 33.78795977916161 35.0 34.0 35.0 29.0 36.5 90-91 33.6561994984403 35.0 34.0 35.0 29.0 36.0 92-93 33.615465066674986 35.0 34.0 35.0 29.0 36.0 94-95 33.59295036523063 35.0 34.0 35.0 29.5 36.0 96-97 33.59711176751224 35.0 34.0 35.0 30.0 36.0 98-99 33.628330733275305 35.0 34.0 35.0 30.0 35.0 100-101 33.24302732392626 34.5 33.0 35.0 29.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 15 2.0 16 6.0 17 67.0 18 366.0 19 1410.0 20 3859.0 21 8782.0 22 16221.0 23 27272.0 24 43974.0 25 70142.0 26 108210.0 27 156953.0 28 179511.0 29 144922.0 30 169427.0 31 210891.0 32 263275.0 33 347333.0 34 475975.0 35 675269.0 36 1035531.0 37 1797859.0 38 2425146.0 39 1287512.0 40 62154.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.25321935742897 20.372875764463018 14.672601723137205 24.701303154970805 2 14.09325498375688 20.745288210944242 42.02415802401455 23.13729878128433 3 17.590686708969223 25.94415885978652 30.790659121259967 25.67449530998429 4 12.000355233321715 18.39295394015263 38.6044859379899 31.002204888535758 5 13.069461357225586 37.556266864815605 35.695046182011275 13.679225595947534 6 29.645682893891294 38.264208518272405 18.67620936162405 13.413899226212244 7 26.069781256496704 32.82805610438512 22.995908043119652 18.106254595998518 8 24.01818879118319 37.306765382549976 21.102580610705708 17.572465215561124 9 25.08517882638721 17.041263568188842 21.19185281569782 36.68170478972612 10-11 23.86161820731815 26.890475549281927 29.04011170216636 20.207794541233564 12-13 24.74730173175843 24.391975810693207 29.064947466189096 21.795774991359266 14-15 21.910012131967207 25.82313925690124 26.59052823468313 25.676320376448423 16-17 21.556904042942552 29.13847131067444 27.243192508203013 22.061432138179995 18-19 21.580513714290063 28.00392334941244 29.07349935635685 21.34206357994065 20-21 22.207448996666905 27.114284360940527 29.076390800818587 21.601875841573985 22-23 21.902995365595295 27.27356238673288 28.93924531268363 21.88419693498819 24-25 21.766134071635417 27.3723481012895 29.080076524561992 21.781441302513088 26-27 21.722634719378593 27.482304156617783 29.049471828647437 21.745589295356186 28-29 21.49493733294947 27.295280368999634 29.095271902613817 22.11451039543708 30-31 21.773689015778192 27.152243143647542 29.143496686383365 21.9305711541909 32-33 21.624189189624563 27.377724384392028 29.07920018299664 21.918886242986773 34-35 21.7630131491682 27.558813834624686 29.12585897176232 21.5523140444448 36-37 21.7967865989745 27.428852968079624 28.818950873436012 21.955409559509864 38-39 21.740473163039876 27.37773406074619 29.018456262025015 21.86333651418892 40-41 21.951036100789644 27.209416335268788 28.948213840756814 21.891333723184754 42-43 21.96340136597818 27.280904846913174 28.82453055680746 21.931163230301188 44-45 21.88500877163226 27.489172197386036 28.635122694768267 21.990696336213432 46-47 22.156277753291285 27.375187365614195 28.219464183780236 22.249070697314284 48-49 22.008855224338628 27.527478005962568 28.211976987273868 22.251689782424933 50-51 21.908351620327828 27.685173544266288 28.229239078661507 22.17723575674438 52-53 22.025585392397034 27.670878642181364 28.27845102134755 22.025084944074056 54-55 21.943467576159385 27.651399356503394 28.123176807754398 22.28195625958282 56-57 22.1389389132941 27.8264340754451 27.92067936985918 22.113947641401623 58-59 21.893329033912106 28.045135403851557 28.12315355179144 21.938382010444897 60-61 22.141767869798617 28.13114464185923 27.81525503990987 21.911832448432282 62-63 21.939596907790936 28.382783757366088 27.741880183934096 21.935739150908883 64-65 21.913548809787674 28.27947211099672 27.748020209092434 22.05895887012317 66-67 21.97993243991609 28.19879964949708 27.692003332791902 22.129264577794928 68-69 21.99193326500192 28.051381594661684 27.794001953189955 22.16268318714644 70-71 22.03899728126927 27.72732863528476 27.879653642108952 22.354020441337013 72-73 22.102367104759445 27.71063263252823 27.857490798272277 22.329509464440044 74-75 21.99884034609961 27.80741511024666 27.843402433277014 22.35034211037672 76-77 22.10729535864447 27.759336700816085 27.778740255698537 22.35462768484091 78-79 22.059484857906718 27.783882895814727 27.800689477272027 22.355942769006525 80-81 22.04973554595566 27.847408880618485 27.76007157386241 22.342783999563444 82-83 22.091352407265536 27.81578936583513 27.83810864682512 22.25474958007421 84-85 22.18495860722989 27.78952041536829 27.77791548812001 22.247605489281813 86-87 22.020339615736358 27.807651094957752 27.85821997155567 22.313789317750214 88-89 22.078899800081356 27.80637167658529 27.82583314056736 22.28889538276599 90-91 22.08692864795535 27.820352422410018 27.860740718770177 22.231978210864458 92-93 22.086763818162332 27.760650035031514 27.892490031240452 22.260096115565702 94-95 21.987636396924714 27.830812692208827 27.910305756294207 22.27124515457225 96-97 22.019000324220933 27.840065929409374 27.890976478787827 22.249957267581866 98-99 22.267278495778157 28.411134562752466 27.96900308194 21.352583859529382 100-101 22.937804228376848 30.989855275292733 25.12563055872813 20.946709937602293 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 2993.0 1 2379.0 2 2437.0 3 3218.5 4 4019.0 5 6195.5 6 8211.5 7 10093.0 8 11670.5 9 11752.5 10 10353.0 11 8723.5 12 9211.0 13 12372.5 14 20526.5 15 31711.0 16 40921.5 17 46704.0 18 48455.0 19 46205.5 20 42125.0 21 38617.5 22 37870.0 23 41984.5 24 50580.0 25 63560.5 26 80258.0 27 98373.0 28 118357.5 29 140252.0 30 161431.5 31 183393.0 32 206290.0 33 228205.5 34 248787.0 35 268063.5 36 290465.0 37 311569.0 38 327621.5 39 341717.0 40 355123.5 41 368578.5 42 378310.0 43 386696.0 44 400597.0 45 416513.0 46 418015.0 47 411821.5 48 403402.0 49 389483.5 50 378710.0 51 366153.0 52 347397.0 53 326976.5 54 307075.0 55 283986.5 56 259141.5 57 232582.0 58 205451.0 59 178952.5 60 150220.5 61 122180.0 62 97001.0 63 74951.0 64 56542.0 65 41888.5 66 30955.5 67 23555.5 68 17903.5 69 12991.0 70 9381.5 71 6782.5 72 4798.5 73 3235.5 74 2201.0 75 1524.0 76 1068.0 77 732.0 78 488.5 79 335.0 80 239.5 81 187.0 82 147.0 83 109.0 84 82.5 85 60.0 86 47.0 87 35.0 88 19.0 89 7.5 90 5.5 91 5.0 92 3.5 93 1.5 94 1.0 95 1.0 96 1.0 97 1.0 98 1.0 99 1.0 100 0.5 >>END_MODULE >>Per base N content warn #Base N-Count 1 0.0 2 1.8158930512383795 3 0.0061711074635812675 4 8.730498065142294 5 3.364147169243621E-4 6 0.07503099483403664 7 0.025630596245674837 8 5.9923871452152E-4 9 2.312851178854989E-4 10-11 0.2972854801620972 12-13 0.30872883701747744 14-15 9.461663913497684E-5 16-17 1.261555188466358E-4 18-19 0.4961801685837224 20-21 2.838862535073752E-4 22-23 1.8404024066153528E-4 24-25 0.17699711791884634 26-27 0.16648695785510453 28-29 1.2636380772061806E-4 30-31 1.2123390817532955E-4 32-33 1.3203965457158782E-4 34-35 4.236097854919473E-4 36-37 3.0823181966355324E-4 38-39 0.0013993717141470286 40-41 0.0018960449576430002 42-43 0.00114034686649435 44-45 0.0010073159451362374 46-47 0.0013897051194045075 48-49 0.002409564475375497 50-51 3.517075204725877E-4 52-53 0.0017206129430578326 54-55 4.870317048578808E-4 56-57 0.010485187945424284 58-59 1.1512182104761893E-4 60-61 0.002550383434754162 62-63 0.0013073989930213622 64-65 0.0015032602103771237 66-67 0.00481404020506974 68-69 0.0020317600375295104 70-71 0.0025014803993414687 72-73 0.003496942029227268 74-75 7.236088168241046E-4 76-77 2.267942829697149E-4 78-79 6.111446816279977E-4 80-81 4.1828037088727433E-4 82-83 0.0015091795521002282 84-85 2.367005054147542E-4 86-87 3.256922822095709E-4 88-89 1.2772619805493168E-4 90-91 2.0408395115781248E-4 92-93 0.0 94-95 0.0 96-97 4.958587295645992E-5 98-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 762.0 20-21 1917.0 22-23 2697.0 24-25 3691.0 26-27 4818.0 28-29 8266.0 30-31 17839.0 32-33 22503.0 34-35 30736.0 36-37 44139.0 38-39 52395.0 40-41 55735.0 42-43 64711.0 44-45 79013.0 46-47 77832.0 48-49 72127.0 50-51 65500.0 52-53 61892.0 54-55 67555.0 56-57 72326.0 58-59 78548.0 60-61 79551.0 62-63 78480.0 64-65 85119.0 66-67 91365.0 68-69 94619.0 70-71 85991.0 72-73 77244.0 74-75 78085.0 76-77 81096.0 78-79 84578.0 80-81 84089.0 82-83 82079.0 84-85 81594.0 86-87 83827.0 88-89 87086.0 90-91 90476.0 92-93 91753.0 94-95 101006.0 96-97 157473.0 98-99 785097.0 100-101 6146459.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 86.25347978982212 #Duplication Level Percentage of deduplicated Percentage of total 1 90.61499015147308 78.15858221685014 2 6.624526182998518 11.427768704848203 3 1.5401099794812028 3.9851953496785586 4 0.5657012077761538 1.9517479076799376 5 0.24497581455434145 1.056500823482905 6 0.1371673910312805 0.7098698874083509 7 0.07822635359965659 0.47231066464676214 8 0.045501926373879856 0.3139759589509936 9 0.03229635394113178 0.2507105620751716 >10 0.11419733307226937 1.501228884178542 >50 0.001993983552296299 0.11171630745145048 >100 2.7471542044475093E-4 0.04004690592969247 >500 3.860672567110213E-5 0.020345826819293793 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 1.0512959903886316E-5 0.0 3 0.0 0.0 0.0 1.0512959903886316E-5 0.0 4 0.0 2.102591980777263E-5 0.0 1.0512959903886316E-5 0.0 5 0.0 2.102591980777263E-5 0.0 1.0512959903886316E-5 0.0 6 9.461663913497684E-5 2.102591980777263E-5 0.0 1.0512959903886316E-5 4.205183961554526E-5 7 9.461663913497684E-5 2.102591980777263E-5 0.0 1.0512959903886316E-5 5.256479951943158E-5 8 9.461663913497684E-5 3.153887971165895E-5 0.0 1.0512959903886316E-5 5.256479951943158E-5 9 9.461663913497684E-5 6.30777594233179E-5 0.0 3.153887971165895E-5 6.30777594233179E-5 10-11 9.461663913497684E-5 6.30777594233179E-5 0.0 6.30777594233179E-5 6.30777594233179E-5 12-13 9.461663913497684E-5 6.30777594233179E-5 0.0 6.833423937526105E-5 6.30777594233179E-5 14-15 9.461663913497684E-5 9.461663913497684E-5 0.0 8.936015918303368E-5 1.1564255894274948E-4 16-17 2.102591980777263E-4 9.461663913497684E-5 0.0 9.461663913497684E-5 1.3141199879857895E-4 18-19 2.102591980777263E-4 9.987311908692E-5 0.0 9.461663913497684E-5 1.366684787505221E-4 20-21 2.102591980777263E-4 1.1564255894274947E-4 0.0 9.461663913497684E-5 1.366684787505221E-4 22-23 2.1551567802966946E-4 1.629508785102379E-4 0.0 1.1038607899080631E-4 1.5243791860635158E-4 24-25 2.2077215798161262E-4 2.102591980777263E-4 0.0 1.629508785102379E-4 1.7872031836606736E-4 26-27 2.2077215798161262E-4 2.2077215798161262E-4 0.0 3.469276768282484E-4 1.8397679831801052E-4 28-29 2.2077215798161262E-4 2.4179807778938528E-4 0.0 0.0012457857486105283 1.8923327826995368E-4 30-31 2.2077215798161262E-4 2.8384991740493053E-4 0.0 0.0052091716323756695 1.8923327826995368E-4 32-33 2.2077215798161262E-4 2.8910639735687366E-4 0.0 0.014870581784047193 1.9974623817384E-4 34-35 2.2602863793355578E-4 3.732100765879642E-4 0.0 0.028374478780589164 2.102591980777263E-4 36-37 2.3128511788549893E-4 4.5205727586711156E-4 0.0 0.04739767972667146 2.102591980777263E-4 38-39 2.3128511788549893E-4 4.6257023577099787E-4 0.0 0.07581421034687616 2.102591980777263E-4 40-41 2.3128511788549893E-4 5.309044751462589E-4 0.0 0.11184738041744652 2.2077215798161262E-4 42-43 2.3128511788549893E-4 5.414174350501452E-4 0.0 0.13492332740647697 2.2602863793355578E-4 44-45 2.365415978374421E-4 6.150081543773494E-4 0.0 0.16203099451864783 2.3128511788549893E-4 46-47 2.4179807778938525E-4 6.728294338487242E-4 0.0 0.1887233997146152 2.575675176452148E-4 48-49 2.470545577413284E-4 6.833423937526106E-4 0.0 0.21017509439849524 2.733369575010442E-4 50-51 2.9961935726076003E-4 7.779590328875873E-4 0.0 0.22753724767976347 2.785934374529874E-4 52-53 3.0487583721270316E-4 7.884719927914736E-4 0.0 0.24781674733436018 2.8910639735687366E-4 54-55 3.0487583721270316E-4 7.884719927914736E-4 0.0 0.28147924494660415 2.9436287730881685E-4 56-57 3.0487583721270316E-4 7.9898495269536E-4 0.0 0.31666086526495973 2.9961935726076003E-4 58-59 3.0487583721270316E-4 7.9898495269536E-4 0.0 0.34423635909285355 3.101323171646463E-4 60-61 3.311582369724189E-4 8.200108725031326E-4 0.0 0.35979553975060524 3.153887971165895E-4 62-63 3.6795359663602104E-4 8.357803123589621E-4 0.0 0.3690732268657849 3.469276768282484E-4 64-65 3.6795359663602104E-4 9.566793512536547E-4 0.0 0.3774362864693265 3.469276768282484E-4 66-67 3.8372303649185054E-4 9.724487911094842E-4 0.0 0.38338136529497424 3.626971166840779E-4 68-69 3.8897951644379367E-4 9.882182309653136E-4 0.0 0.38908990252278447 3.732100765879642E-4 70-71 4.0474895629962317E-4 0.001003987670821143 0.0 0.39414137975660185 3.8897951644379367E-4 72-73 4.6782671572294105E-4 0.0010092441507730864 0.0 0.3982782294787811 4.5205727586711156E-4 74-75 4.730831956748842E-4 0.0010355265505328022 0.0 0.40157929888860144 4.5205727586711156E-4 76-77 4.835961555787705E-4 0.0010723219101964041 0.0 0.4046070313409207 4.6257023577099787E-4 78-79 4.835961555787705E-4 0.0010828348701002904 0.0 0.4069724473192951 4.6257023577099787E-4 80-81 4.835961555787705E-4 0.0010828348701002904 0.0 0.40817092474833816 4.6782671572294105E-4 82-83 4.835961555787705E-4 0.0010828348701002904 0.0 0.40867554682372464 4.835961555787705E-4 84-85 4.835961555787705E-4 0.0010880913500522335 0.0 0.40892785786141794 4.835961555787705E-4 86-87 4.941091154826568E-4 0.0011038607899080631 0.0 0.4090067050606971 4.835961555787705E-4 88-89 5.151350352904294E-4 0.001172195029283324 0.0 0.4090277309805049 4.835961555787705E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 10815 0.0 54.216682 1 GTATCAA 19785 0.0 41.29604 1 ATCAACG 23920 0.0 33.292034 3 TCAACGC 23995 0.0 33.224678 4 TATCAAC 25430 0.0 31.741077 2 CAACGCA 25035 0.0 30.302773 5 AACGCAG 25925 0.0 29.395601 6 CTTATAC 11245 0.0 27.325188 1 ACGCAGA 29815 0.0 25.59754 7 CGCAGAG 30540 0.0 24.943144 8 TATACAC 15470 0.0 22.834875 3 GTACATG 23180 0.0 21.890476 1 GTGGTAT 5450 0.0 21.120998 1 GCAGAGT 35830 0.0 21.019857 9 TTATACA 15630 0.0 20.891552 2 TACATGG 23705 0.0 20.890343 2 ACATGGG 24215 0.0 19.785975 3 GAGTACT 22470 0.0 19.514206 12-13 AGAGTAC 32230 0.0 19.098955 10-11 TGGTATC 5275 0.0 19.060583 2 >>END_MODULE