##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138710_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 9601958 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.447699208848864 31.0 31.0 34.0 30.0 34.0 2 31.738296397463934 31.0 31.0 34.0 30.0 34.0 3 31.61759080804144 31.0 31.0 34.0 30.0 34.0 4 35.55556575023552 37.0 35.0 37.0 33.0 37.0 5 35.29090098082079 37.0 35.0 37.0 33.0 37.0 6 35.398139733583506 37.0 35.0 37.0 33.0 37.0 7 35.306265034693965 37.0 35.0 37.0 32.0 37.0 8 35.28909114161924 37.0 35.0 37.0 32.0 37.0 9 36.97401175885168 39.0 37.0 39.0 33.0 39.0 10-11 36.822296608670854 39.0 37.0 39.0 32.5 39.0 12-13 36.77584342693439 39.0 37.0 39.0 32.0 39.0 14-15 37.86263655808534 40.0 37.0 41.0 32.5 41.0 16-17 37.79753577343288 40.0 37.0 41.0 32.0 41.0 18-19 37.789973722026275 40.0 37.0 41.0 32.0 41.0 20-21 37.786567441242056 40.0 37.0 41.0 32.0 41.0 22-23 37.70708282123387 39.5 37.0 41.0 32.0 41.0 24-25 37.61107147859336 39.0 36.5 41.0 32.0 41.0 26-27 37.405727239951084 39.0 36.0 41.0 32.0 41.0 28-29 37.22515828798914 39.0 36.0 40.0 31.0 41.0 30-31 37.04195954484197 39.0 36.0 40.0 31.0 41.0 32-33 36.85451258731644 39.0 35.5 40.0 30.0 41.0 34-35 36.7042439174562 38.0 35.0 40.0 30.0 41.0 36-37 36.81259034459595 39.0 35.0 40.0 30.0 41.0 38-39 36.78036723326912 39.0 35.0 40.0 30.0 41.0 40-41 36.73861205119971 39.0 35.0 40.0 30.0 41.0 42-43 36.82287106930364 39.0 35.0 40.0 30.0 41.0 44-45 36.8659476024561 39.0 35.0 40.0 30.0 41.0 46-47 36.733803529324575 39.0 35.0 40.0 30.0 41.0 48-49 36.66514217883117 39.0 35.0 40.0 30.0 41.0 50-51 36.56248102938987 39.0 35.0 40.0 30.0 41.0 52-53 36.39732547881286 38.0 35.0 40.0 30.0 41.0 54-55 36.214133511537526 38.0 34.5 40.0 29.0 41.0 56-57 36.07220667831065 38.0 34.0 40.0 29.0 41.0 58-59 35.80006193587725 38.0 34.0 40.0 28.0 41.0 60-61 35.649732786490496 38.0 34.0 40.0 28.0 41.0 62-63 35.39219853506178 37.0 34.0 40.0 28.0 41.0 64-65 35.079753773909474 37.0 33.0 39.5 28.0 41.0 66-67 34.74449089472597 36.0 33.0 39.0 27.5 40.5 68-69 34.52618167235917 36.0 33.0 39.0 27.0 40.0 70-71 34.19983589016832 35.0 32.0 38.5 26.5 40.0 72-73 33.9102116446863 35.0 32.0 38.0 26.0 40.0 74-75 33.63302787308243 35.0 32.0 37.0 26.0 39.5 76-77 32.35422847236231 34.0 30.5 36.0 25.5 38.5 78-79 33.1691941240059 34.5 31.5 36.0 26.0 39.0 80-81 33.232577109389965 35.0 32.0 36.0 27.0 38.5 82-83 32.99051076957489 35.0 32.0 36.0 26.0 37.0 84-85 32.77891687231531 34.0 32.0 35.0 26.0 37.0 86-87 32.5972728540747 34.0 31.5 35.0 26.0 36.5 88-89 32.47292318355073 34.0 31.0 35.0 26.0 36.0 90-91 32.32513850449284 34.0 31.0 35.0 26.0 36.0 92-93 32.32643085228919 34.0 31.0 35.0 26.0 35.5 94-95 32.26833689115916 34.0 31.0 35.0 26.0 35.0 96-97 32.408278267588784 34.0 31.0 35.0 27.0 35.0 98-99 32.5873993505069 34.0 31.5 35.0 28.0 35.0 100 31.373763512765752 33.0 30.0 34.0 25.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 2.0 18 3.0 19 16.0 20 127.0 21 731.0 22 3353.0 23 10618.0 24 27440.0 25 56208.0 26 98931.0 27 150810.0 28 208950.0 29 268177.0 30 330457.0 31 396486.0 32 476242.0 33 577146.0 34 723197.0 35 935973.0 36 1292166.0 37 1756336.0 38 1621637.0 39 654712.0 40 12239.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 40.94796082215731 20.95684026112174 14.123202788431277 23.971996128289668 2 15.842716662580694 21.77886010332476 39.296172718106035 23.08225051598851 3 18.79661035307017 25.770062812280514 30.6133737084907 24.81995312615862 4 13.368252600146763 17.800379880853466 37.77348328330534 31.057884235694427 5 13.274552960969002 37.85625806736501 35.54673952958344 13.322449442082544 6 31.02881724748223 37.639437706351146 17.883706635667433 13.44803841049919 7 27.056919015892383 32.381687151724684 22.716460538569322 17.844933293813618 8 24.971885942429658 36.660220759141 20.6839792467328 17.68391405169654 9 25.49812236212656 16.338896712524676 21.121452520413026 37.04152840493574 10-11 24.687568931253395 26.619201000462617 28.573666954177472 20.119563114106516 12-13 25.04267879530404 24.09170088017465 28.931979290057296 21.933641034464014 14-15 22.10955307240461 25.676190210371676 26.340752584004225 25.873504133219495 16-17 21.89504473983327 28.806603819762593 27.14476568216607 22.15358575823806 18-19 21.87048978077666 28.008439245700234 28.785850286914773 21.33522068660833 20-21 22.61394207985502 27.1653395686975 28.768501689901733 21.452216661545755 22-23 22.34781494070114 27.070061454931132 28.581071793708023 22.001051810659707 24-25 22.107872172300553 27.239708742977886 28.660514350677424 21.991904734044134 26-27 22.084565509790437 27.365490795315417 28.599370940372676 21.950572754521467 28-29 22.09247134066864 27.45932163351198 28.568048669631896 21.880158356187483 30-31 22.263167985572434 27.37921282862973 28.47015344393027 21.887465741867576 32-33 22.100361301271516 27.52340723281712 28.38501413049357 21.991217335417794 34-35 22.245428254925745 27.522257768258314 28.407655641317238 21.824658335498707 36-37 22.235658727554245 27.468371058388257 28.33438198385775 21.961588230199748 38-39 22.078034804277458 27.60365224556117 28.392166246452515 21.926146703708852 40-41 22.349132685889934 27.49346958875482 28.21416737619589 21.943230349159357 42-43 22.165000571758206 27.607872755007822 28.06440553618247 22.1627211370515 44-45 22.28131171693796 27.69609753542266 27.875666141825572 22.146924605813805 46-47 22.36452624890244 27.684156496552344 27.664319186920146 22.28699806762507 48-49 22.25525669591378 27.797916889873626 27.673389178005298 22.2734372362073 50-51 22.278112998086765 27.890876326173508 27.57307016577627 22.257940509963454 52-53 22.43539884987033 27.797844690875745 27.440279796954897 22.326476662299026 54-55 22.40221927304915 27.70423705409063 27.52311418748976 22.37042948537046 56-57 22.388474146374804 27.822702698386127 27.492777228730574 22.296045926508498 58-59 22.349527603388474 27.875561012585514 27.512448321218287 22.26246306280773 60-61 22.40849448199495 27.823439724365112 27.57462072703768 22.19344506660226 62-63 22.456928859022472 27.892800742854927 27.450007222471363 22.200263175651234 64-65 22.36594399500613 27.832652585460142 27.49206393430992 22.309339485223806 66-67 22.4222182651065 27.86349041715585 27.36415682195334 22.350134495784307 68-69 22.34697344435575 27.84038559148821 27.495722985623594 22.316917978532445 70-71 22.33341902250876 27.60993876242991 27.53488044047576 22.521761774585567 72-73 22.41322436147224 27.699637676769534 27.44787703288138 22.439260928876852 74-75 22.229790767553315 27.826262188867783 27.513035375416106 22.430911668162796 76-77 22.378966565194762 27.721092685748154 27.436777944042532 22.463162805014548 78-79 22.286836570193255 27.726219122945732 27.4591486001713 22.52779570668971 80-81 22.331854405170137 27.72046088848139 27.45648761445438 22.491197091894087 82-83 22.332035084661875 27.716880071748314 27.552647600861313 22.3984372427285 84-85 22.40866678395383 27.722467641054173 27.476221692724994 22.392643882267002 86-87 22.304376695384544 27.721053165109943 27.563601518878656 22.410968620626857 88-89 22.322673803647078 27.633795807019073 27.609280818161107 22.434249571172742 90-91 22.34785907248221 27.695145929955284 27.576989014455144 22.380005983107367 92-93 22.3802457342789 27.627327376439048 27.60734148813329 22.385085401148757 94-95 22.157238504720414 27.676024932204196 27.763585804361746 22.403150758713643 96-97 22.184102579381175 27.836245166946018 27.82444339154635 22.15520886212646 98-99 23.29497455292499 29.829747887987086 27.94950654229089 18.92577101679703 100 22.378603894753283 30.901074742185102 21.586420087389026 25.13390127567259 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1706.0 1 1596.5 2 2326.5 3 3378.5 4 4525.5 5 7260.5 6 9839.5 7 11974.5 8 13534.5 9 13581.0 10 12250.0 11 10678.0 12 11216.0 13 14898.0 14 23493.5 15 35000.5 16 44628.5 17 50488.5 18 52685.0 19 52316.0 20 50348.0 21 47974.5 22 47043.5 23 50048.5 24 57845.0 25 70599.5 26 87537.5 27 106281.0 28 125532.0 29 147057.5 30 169365.5 31 190578.0 32 211671.5 33 232034.0 34 252820.0 35 273088.5 36 295598.0 37 315598.0 38 328970.0 39 341092.0 40 353474.0 41 364492.0 42 373749.0 43 383495.5 44 392445.0 45 400507.5 46 405212.0 47 408114.5 48 410640.5 49 409026.0 50 405154.0 51 396106.5 52 382383.0 53 366472.5 54 347726.0 55 326272.5 56 302693.0 57 278056.5 58 249558.0 59 217827.0 60 185820.0 61 154456.0 62 124826.0 63 98972.5 64 76957.0 65 59851.5 66 46738.0 67 36057.0 68 27274.0 69 20284.0 70 14864.0 71 10490.0 72 7391.5 73 5000.0 74 3384.0 75 2284.0 76 1535.0 77 1049.0 78 735.0 79 518.0 80 341.0 81 218.5 82 159.5 83 118.0 84 92.0 85 73.5 86 53.0 87 37.5 88 26.5 89 20.0 90 17.0 91 13.5 92 10.0 93 5.0 94 1.0 95 0.0 96 0.0 97 0.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 1.4580359547500626E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0015830104651572106 20-21 0.002838121122156639 22-23 0.004796826532065249 24-25 0.0010107127739246524 26-27 0.0014908133319787437 28-29 0.004168247583681482 30-31 0.007503344239482504 32-33 0.013413889327867733 34-35 1.6832030849746142E-4 36-37 9.363965598165891E-4 38-39 0.0021646038329802345 40-41 0.0025595094001208993 42-43 2.822149291371881E-4 44-45 3.2911118423474054E-5 46-47 0.003214506875213953 48-49 0.0038033861710002424 50-51 9.259603259516685E-4 52-53 0.0010160762785109856 54-55 9.401053649201772E-4 56-57 0.0013211406340699974 58-59 5.944153960245023E-4 60-61 4.3325006507777015E-4 62-63 0.001510241017415271 64-65 4.314819327111323E-4 66-67 0.0018425023955654027 68-69 0.0015958399744868252 70-71 4.817584104901545E-4 72-73 5.73231122750019E-4 74-75 0.007766824603107667 76-77 0.0028475555444184494 78-79 0.005765931990832168 80-81 1.2432982769267325E-4 82-83 0.004367171257497474 84-85 0.0025835815391537145 86-87 6.027029411540454E-4 88-89 0.002908849749768606 90-91 5.67295204540177E-4 92-93 4.646078036455916E-5 94-95 4.5368121715188805E-4 96-97 0.0 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 327.0 20-21 1084.0 22-23 2284.0 24-25 4704.0 26-27 6780.0 28-29 11939.0 30-31 24856.0 32-33 33432.0 34-35 49319.0 36-37 69167.0 38-39 79686.0 40-41 83468.0 42-43 93048.0 44-45 108236.0 46-47 108054.0 48-49 100360.0 50-51 92869.0 52-53 92005.0 54-55 99171.0 56-57 103780.0 58-59 102822.0 60-61 99698.0 62-63 98017.0 64-65 104244.0 66-67 109384.0 68-69 111377.0 70-71 109948.0 72-73 104670.0 74-75 108493.0 76-77 106787.0 78-79 114077.0 80-81 117820.0 82-83 114884.0 84-85 118738.0 86-87 126689.0 88-89 141802.0 90-91 151094.0 92-93 167978.0 94-95 198525.0 96-97 400535.0 98-99 633515.0 100-101 5096292.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 85.2154780857268 #Duplication Level Percentage of deduplicated Percentage of total 1 90.07876672811447 76.76105172108936 2 6.72085953531701 11.454425168981093 3 1.774857717508507 4.5373604679488775 4 0.6555335568749835 2.234464218013548 5 0.3098941554896313 1.3203889308010743 6 0.1479466982896408 0.7564409175573912 7 0.09529659110041024 0.5684521199393033 8 0.05595351346712942 0.3814484320542069 9 0.04641226743225833 0.35595392024542516 >10 0.11254632758691464 1.4556286965712448 >50 0.0015474238223731319 0.08871945031376252 >100 3.4597669223969114E-4 0.05768852136914985 >500 3.950830435996832E-5 0.027977435115584013 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.0829085067858035E-5 2 0.0 1.0414542533929017E-5 0.0 2.0829085067858035E-5 2.0829085067858035E-5 3 0.0 1.0414542533929017E-5 0.0 2.0829085067858035E-5 2.0829085067858035E-5 4 0.0 7.290179773750312E-5 0.0 3.1243627601787054E-5 2.0829085067858035E-5 5 0.0 7.290179773750312E-5 0.0 3.1243627601787054E-5 3.1243627601787054E-5 6 0.0 7.290179773750312E-5 0.0 3.1243627601787054E-5 3.1243627601787054E-5 7 0.0 7.290179773750312E-5 0.0 3.1243627601787054E-5 4.165817013571607E-5 8 0.0 8.331634027143214E-5 0.0 3.1243627601787054E-5 5.2072712669645085E-5 9 0.0 2.0829085067858034E-4 0.0 6.248725520357411E-5 1.0414542533929017E-4 10-11 2.0829085067858035E-5 2.0829085067858034E-4 0.0 7.810906900446762E-5 1.5101086674197076E-4 12-13 4.165817013571607E-5 2.0829085067858034E-4 0.0 8.331634027143214E-5 1.8746176561072232E-4 14-15 4.686544140268058E-5 2.8639991968304793E-4 0.0 9.373088280536116E-5 2.343272070134029E-4 16-17 6.248725520357411E-5 2.9160719095001246E-4 0.0 1.0414542533929017E-4 2.4994902081429643E-4 18-19 7.290179773750312E-5 3.020217334839415E-4 0.0 1.1455996787321919E-4 2.655708346151899E-4 20-21 7.290179773750312E-5 3.17643547284835E-4 0.0 1.1455996787321919E-4 2.9160719095001246E-4 22-23 1.4059632420804173E-4 3.593017174205511E-4 0.0 1.4059632420804173E-4 3.0722900475090606E-4 24-25 2.1870539321250935E-4 4.217889726241252E-4 0.0 1.7183995180982878E-4 3.2285081855179954E-4 26-27 2.2911993574643838E-4 4.4782532895894776E-4 0.0 2.343272070134029E-4 3.2285081855179954E-4 28-29 2.655708346151899E-4 4.4782532895894776E-4 0.0 5.155198554294863E-4 3.4367990361965756E-4 30-31 3.1243627601787054E-4 5.311416692303799E-4 0.0 0.0014996941248857786 3.5409444615358657E-4 32-33 3.1243627601787054E-4 5.311416692303799E-4 0.0 0.0035669808178706887 3.8533807375537365E-4 34-35 3.1243627601787054E-4 6.248725520357411E-4 0.0 0.006352870945696701 4.322035151580542E-4 36-37 3.4367990361965756E-4 7.342252486419957E-4 0.0 0.01060200429953974 4.686544140268058E-4 38-39 3.5409444615358657E-4 7.915052325786053E-4 0.0 0.017137129739580197 4.894834990946638E-4 40-41 3.6450898868751563E-4 8.69614301583073E-4 0.0 0.023984691455638526 4.894834990946638E-4 42-43 3.801308024884092E-4 9.11272471718789E-4 0.0 0.030556267794547738 4.894834990946638E-4 44-45 3.8533807375537365E-4 0.0010258324395920082 0.0 0.038039116605175734 5.103125841625218E-4 46-47 3.8533807375537365E-4 0.0011143560511304048 0.0 0.046391579717386805 5.207271266964509E-4 48-49 3.9054534502233813E-4 0.0011195633223973693 0.0 0.05456699560652109 5.259343979634154E-4 50-51 4.0616715882323167E-4 0.0012185014764696952 0.0 0.0628101060221259 5.311416692303799E-4 52-53 4.165817013571607E-4 0.001239330561537553 0.0 0.0712458854746084 5.571780255652025E-4 54-55 4.4782532895894776E-4 0.001260159646605411 0.0 0.07927549776826769 6.04043466967883E-4 56-57 4.8427622782769926E-4 0.0012914032742071982 0.0 0.08746653547120285 6.509089083705636E-4 58-59 5.051053128955574E-4 0.0013018178167411272 0.0 0.09575651132821035 6.873598072393151E-4 60-61 5.207271266964509E-4 0.0013643050719447012 0.0 0.1035986618562589 6.977743497732442E-4 62-63 5.259343979634154E-4 0.0013747196144786302 0.0 0.11089404890127619 7.498470624428893E-4 64-65 5.415562117643089E-4 0.0014319995984152399 0.0 0.11792386511167827 7.602616049768182E-4 66-67 5.51970754298238E-4 0.0014580359547500625 0.0 0.12557334660284913 7.654688762437828E-4 68-69 5.51970754298238E-4 0.001515315938686672 0.0 0.13309785358361284 7.862979613116408E-4 70-71 5.51970754298238E-4 0.0015621813800893525 0.0 0.13937261546030508 7.915052325786053E-4 72-73 5.675925680991314E-4 0.0015725959226232816 0.0 0.14441846131799368 8.227488601803924E-4 74-75 5.832143819000249E-4 0.0016194613640259621 0.0 0.14849054744875995 8.383706739812859E-4 76-77 5.832143819000249E-4 0.001707984975564359 0.0 0.15184403014468506 8.435779452482504E-4 78-79 5.93628924433954E-4 0.0017288140606322169 0.0 0.15458826210237536 8.435779452482504E-4 80-81 5.93628924433954E-4 0.0017288140606322169 0.0 0.15556202182929774 8.539924877821795E-4 82-83 5.93628924433954E-4 0.0017288140606322169 0.0 0.15639518523201207 8.69614301583073E-4 84-85 5.93628924433954E-4 0.0017288140606322169 0.0 0.1566711706091612 8.800288441170019E-4 86-87 5.93628924433954E-4 0.0017600576882340038 0.0 0.15684821783223796 8.90443386650931E-4 88 5.93628924433954E-4 0.001832959485971507 0.0 0.1568742541885728 9.060652004518245E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 10620 0.0 47.01309 1 GTATCAA 18585 0.0 32.947178 1 TCAACGC 22170 0.0 26.954369 4 ATCAACG 22630 0.0 26.424566 3 CAACGCA 22895 0.0 26.118713 5 TATCAAC 23685 0.0 25.524223 2 AACGCAG 23525 0.0 25.471485 6 GTACATG 26065 0.0 21.276516 1 ACGCAGA 28390 0.0 21.063332 7 TACATGG 25950 0.0 20.8973 2 CGCAGAG 28975 0.0 20.666336 8 ACATGGG 26890 0.0 19.785997 3 GTGGTAT 5650 0.0 19.282919 1 TGGTATC 5460 0.0 18.60367 2 CATGGGG 20795 0.0 17.805292 4 GCAGAGT 33585 0.0 17.573498 9 GAGTACT 20030 0.0 17.044157 12-13 AGAGTAC 29940 0.0 16.600744 10-11 CAGAGTA 32805 0.0 16.51183 10-11 GAGTACA 19440 0.0 15.675314 1 >>END_MODULE