##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138681_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6862002 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.808781897761033 33.0 32.0 34.0 28.0 34.0 2 32.18071183890649 33.0 33.0 34.0 29.0 34.0 3 32.00084129966736 33.0 31.0 33.0 29.0 34.0 4 32.56946413014744 33.0 33.0 34.0 31.0 34.0 5 32.86909622002442 33.0 33.0 34.0 31.0 34.0 6 36.60384549581886 38.0 37.0 38.0 34.0 38.0 7 37.06488048240149 38.0 38.0 38.0 36.0 38.0 8 37.01816743859882 38.0 38.0 38.0 36.0 38.0 9 37.124299584873334 38.0 38.0 38.0 36.0 38.0 10-11 37.22741118408301 38.0 38.0 38.0 36.0 38.0 12-13 37.30477679837459 38.0 38.0 38.0 37.0 38.0 14-15 37.264313679885255 38.0 38.0 38.0 37.0 38.0 16-17 37.331159040758074 38.0 38.0 38.0 37.0 38.0 18-19 37.34973780246639 38.0 38.0 38.0 37.0 38.0 20-21 37.36215162598303 38.0 38.0 38.0 37.0 38.0 22-23 37.37264927625692 38.0 38.0 38.0 37.0 38.0 24-25 37.38615478518237 38.0 38.0 38.0 37.0 38.0 26-27 37.35459309041012 38.0 38.0 38.0 37.0 38.0 28-29 37.33567400569506 38.0 38.0 38.0 37.0 38.0 30-31 37.332424165503774 38.0 38.0 38.0 37.0 38.0 32-33 37.317622180564484 38.0 38.0 38.0 37.0 38.0 34-35 37.297575188620776 38.0 38.0 38.0 37.0 38.0 36-37 37.27672565592289 38.0 38.0 38.0 37.0 38.0 38-39 37.278154378924036 38.0 38.0 38.0 37.0 38.0 40-41 37.26769255574454 38.0 38.0 38.0 37.0 38.0 42-43 37.22671703680987 38.0 38.0 38.0 37.0 38.0 44-45 37.14668319481578 38.0 38.0 38.0 36.0 38.0 46-47 37.17777371027407 38.0 38.0 38.0 37.0 38.0 48-49 37.139320445370245 38.0 38.0 38.0 36.0 38.0 50-51 37.09925671110376 38.0 38.0 38.0 36.0 38.0 52-53 37.07664049108445 38.0 38.0 38.0 36.0 38.0 54-55 37.04592988028406 38.0 38.0 38.0 36.0 38.0 56-57 36.999174568600296 38.0 38.0 38.0 36.0 38.0 58-59 36.981699860008845 38.0 38.0 38.0 36.0 38.0 60-61 36.987752864408 38.0 38.0 38.0 36.0 38.0 62-63 36.98778345712813 38.0 38.0 38.0 36.0 38.0 64-65 36.94889975785668 38.0 38.0 38.0 36.0 38.0 66-67 36.968805763131556 38.0 38.0 38.0 36.0 38.0 68-69 36.95233943963917 38.0 38.0 38.0 36.0 38.0 70-71 36.95092361562706 38.0 38.0 38.0 36.0 38.0 72-73 36.93037470997137 38.0 38.0 38.0 36.0 38.0 74-75 36.91872775031803 38.0 38.0 38.0 35.5 38.0 76-77 36.90107638929301 38.0 38.0 38.0 35.0 38.0 78-79 36.87681117891023 38.0 38.0 38.0 35.0 38.0 80-81 36.8392571226629 38.0 38.0 38.0 35.0 38.0 82-83 36.798591891446804 38.0 38.0 38.0 35.0 38.0 84-85 36.77507611867158 38.0 38.0 38.0 35.0 38.0 86-87 36.76066931665276 38.0 38.0 38.0 35.0 38.0 88-89 36.74128538157128 38.0 38.0 38.0 35.0 38.0 90-91 36.712821967028205 38.0 38.0 38.0 34.5 38.0 92-93 36.685056410536404 38.0 38.0 38.0 34.0 38.0 94-95 36.65244217286126 38.0 38.0 38.0 34.0 38.0 96-97 36.65405814853715 38.0 38.0 38.0 34.0 38.0 98-99 36.660963749195076 38.0 38.0 38.0 34.0 38.0 100 35.20723886848341 38.0 35.0 38.0 29.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 0.0 19 2.0 20 13.0 21 96.0 22 406.0 23 1305.0 24 3228.0 25 6767.0 26 12202.0 27 19981.0 28 30481.0 29 43892.0 30 58746.0 31 77009.0 32 100949.0 33 136646.0 34 200984.0 35 344011.0 36 889784.0 37 4935499.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.88847511265663 19.071562497358645 13.246075999394929 25.793886390589805 2 14.24902070827286 20.290018124857635 43.17576594173551 22.28519522513399 3 18.36189113230246 25.858901762871778 29.952964339609856 25.826242765215905 4 12.2490946882695 17.302008554064624 39.919944634225494 30.528952123440376 5 13.411873094761559 37.05469628251347 35.902787553836326 13.630643068888643 6 29.71952502831914 37.96168066678257 19.129485758238125 13.189308546660165 7 26.213749281915106 32.34386990851941 24.028672681820844 17.41370812774464 8 23.73932563703712 37.46578622390375 21.66080686073831 17.134081278320817 9 25.740374310587494 16.611085219736164 21.617379301259312 36.03116116841703 10-11 24.274253238960473 26.51544352733263 29.30230555198112 19.907997681725785 12-13 24.940928318003987 24.12025674139996 29.497841883462 21.440973057134055 14-15 22.13048028840563 25.368595054329624 26.86123524883846 25.639689408426285 16-17 21.800751442509053 28.32556737814999 27.641867489983245 22.23181368935771 18-19 21.847224760354194 27.760287741099464 29.16449893194435 21.22798856660199 20-21 22.56516472206283 26.966028180816277 28.93827727227186 21.530529824849033 22-23 22.328251547696766 26.87644228418539 28.80397410069489 21.991332067422952 24-25 22.108215943350825 26.917561611340563 28.92514965783542 22.049072787473197 26-27 22.062561875631875 27.123901106269248 28.79000999338827 22.023527024710607 28-29 22.04705369483697 27.216362724457483 28.822447497798436 21.914136082907117 30-31 22.26468014839788 27.06546019453291 28.721963808754445 21.947895848314765 32-33 22.029464251646516 27.162807438266746 28.77557414035554 22.0321541697312 34-35 22.158212631260138 27.138022539552132 28.779707003551845 21.92405782563588 36-37 22.181568078325697 27.09138419665641 28.68719003379819 22.039857691219705 38-39 22.04301734899545 27.278876620578586 28.757964772810425 21.920141257615548 40-41 22.292478513912105 27.108787512297393 28.604769093855214 21.99396487993529 42-43 22.16281254924237 27.17853494205094 28.523636413699233 22.135016095007458 44-45 22.21960652455139 27.299232790921867 28.380775214921556 22.10038546960519 46-47 22.213042951917554 27.25349587202616 28.205043637082404 22.32841753897388 48-49 22.230692791680777 27.350998762137134 28.128538796881287 22.289769649300798 50-51 22.192667590372338 27.442991569962206 28.057915263785453 22.30642557588 52-53 22.289150153355962 27.40796111711973 27.96863892009995 22.334249809424364 54-55 22.279124760327374 27.31664970444462 27.989431768046245 22.414793767181752 56-57 22.277062943362267 27.38677785138482 27.994773433801274 22.341385771451634 58-59 22.25726675489837 27.492387958472786 28.001537465046994 22.248807821581845 60-61 22.382966652617803 27.388442486020303 28.005112389566666 22.22347847179523 62-63 22.341391840152173 27.436695741239014 27.985335360153474 22.236577058455335 64-65 22.227492301630157 27.377639824680994 28.030215947903447 22.364651925785402 66-67 22.250758450696008 27.401454368463344 27.924274998256077 22.423512182584567 68-69 22.23997321639072 27.3250898184426 28.08414539535116 22.35079156981552 70-71 22.27523667131262 27.11939735742192 28.115568139930897 22.48979783133456 72-73 22.381176481830085 27.219485992216306 28.031555906229823 22.36778161972379 74-75 22.24316712415145 27.382025564304215 27.96855651742455 22.40625079411979 76-77 22.35514320509432 27.306042849036917 27.87546847483438 22.463345471034383 78-79 22.276574776147438 27.30837735116416 27.86663705179367 22.548410820894734 80-81 22.307337848936328 27.418896457576675 27.865260718984636 22.408504974502364 82-83 22.400358931907725 27.373559120548464 27.935100822321417 22.290981125222388 84-85 22.47375087766683 27.397673090076108 27.758663841653362 22.3699121906037 86-87 22.301758560652694 27.417581383521007 27.856572030021898 22.424088025804405 88-89 22.38582977774259 27.38611334629549 27.789198386508858 22.438858489453057 90-91 22.4039295902394 27.508305691524836 27.72467209036878 22.363092627866983 92-93 22.497365633025193 27.457570887880294 27.715327714301058 22.329735764793448 94-95 22.321735170294087 27.528782071616213 27.783457113115677 22.366025644974023 96-97 22.38366141185138 27.61118085952226 27.85591361479851 22.14924411382784 98-99 23.470688680870396 29.519336446477308 28.0933133794916 18.916661493160696 100 30.089477429107514 40.61574263322724 29.29477993766525 0.0 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 808.0 1 830.0 2 1376.5 3 2092.0 4 2911.5 5 4522.0 6 5811.0 7 6708.0 8 7514.0 9 7559.0 10 6969.5 11 6646.5 12 7408.0 13 9353.0 14 13317.5 15 18262.0 16 21837.5 17 23834.0 18 24021.0 19 22463.0 20 20631.5 21 19708.0 22 21034.0 23 25380.5 24 32845.5 25 43111.5 26 55744.0 27 70172.5 28 84629.0 29 100450.5 30 115966.5 31 130708.5 32 146138.0 33 161582.0 34 176382.0 35 191408.0 36 207958.5 37 222919.5 38 234315.5 39 242386.0 40 251245.0 41 260855.0 42 268312.0 43 274839.0 44 282081.0 45 288921.0 46 291490.5 47 292050.5 48 291382.5 49 287383.0 50 281888.5 51 275003.0 52 265161.5 53 252598.5 54 237849.0 55 220839.5 56 201732.0 57 181383.0 58 160699.5 59 137042.5 60 112799.0 61 91193.5 62 72287.5 63 55191.5 64 40485.0 65 29811.5 66 21738.0 67 16160.0 68 11944.0 69 8471.0 70 6061.0 71 4342.0 72 2960.5 73 1862.5 74 1169.5 75 767.0 76 492.0 77 289.5 78 174.5 79 110.5 80 70.5 81 44.0 82 26.5 83 17.5 84 12.5 85 10.0 86 9.0 87 7.0 88 5.5 89 5.0 90 4.5 91 4.0 92 3.0 93 2.0 94 1.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0022588160131693344 3 0.002725152222339778 4 1.4573006536576352E-5 5 0.0 6 5.100552287801723E-4 7 0.0 8 0.0 9 0.0 10-11 1.4573006536576352E-5 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 2.7689739384901586E-4 24-25 0.0011513690287852458 26-27 0.003046316398583536 28-29 0.0017932949140552477 30-31 0.002684911613877024 32-33 0.0032965028928457485 34-35 9.450794548078389E-4 36-37 7.35126714159283E-6 38-39 5.912830976257175E-5 40-41 7.436626187127231E-6 42-43 5.985741664069104E-4 44-45 0.0 46-47 0.0 48-49 2.3756365748102518E-4 50-51 0.006351682948713947 52-53 0.0 54-55 0.002824559766860837 56-57 0.0467993441920471 58-59 0.05829190353240793 60-61 0.036862659044731905 62-63 0.008721610973395999 64-65 0.0 66-67 0.0 68-69 6.769401103562811E-4 70-71 0.002778206096279281 72-73 0.010185882980413247 74-75 0.004858161914439671 76-77 0.003775670207560945 78-79 0.003912738372594512 80-81 0.01641239895394517 82-83 0.052978777383231375 84-85 0.03432241484443534 86-87 0.009179604937342312 88-89 0.008139750513398289 90-91 0.0 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 36.0 20-21 151.0 22-23 310.0 24-25 538.0 26-27 1337.0 28-29 3682.0 30-31 11997.0 32-33 14625.0 34-35 20130.0 36-37 33790.0 38-39 41924.0 40-41 40476.0 42-43 44864.0 44-45 54335.0 46-47 55528.0 48-49 54734.0 50-51 50470.0 52-53 47727.0 54-55 52000.0 56-57 56087.0 58-59 56123.0 60-61 56285.0 62-63 53084.0 64-65 54760.0 66-67 59043.0 68-69 61436.0 70-71 61232.0 72-73 56781.0 74-75 56510.0 76-77 59819.0 78-79 62733.0 80-81 62821.0 82-83 58740.0 84-85 56661.0 86-87 58563.0 88-89 62969.0 90-91 63964.0 92-93 63950.0 94-95 71767.0 96-97 215068.0 98-99 1595509.0 100-101 3329443.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 84.59020576010448 #Duplication Level Percentage of deduplicated Percentage of total 1 89.46576564603063 75.6792752448302 2 7.305526880793607 12.35952044064611 3 1.7761226821192557 4.507277494069695 4 0.6666550448493357 2.2556994965926793 5 0.3048769771134652 1.2894803112773343 6 0.1624269033417659 0.824383510479395 7 0.09685738414041523 0.5735230237676242 8 0.05457246470507624 0.3693036814590751 9 0.038350207801709044 0.29196467720003993 >10 0.1263386963928398 1.6354711027545492 >50 0.0019827052969555903 0.11239883730354394 >100 4.399112510030281E-4 0.05705383294319775 >500 8.44961639083964E-5 0.044648346676552715 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 2.9146013073152704E-5 0.0 0.0 0.0 3 0.0 2.9146013073152704E-5 0.0 1.4573006536576352E-5 0.0 4 0.0 1.0201104575603447E-4 0.0 2.9146013073152704E-5 0.0 5 0.0 1.4573006536576353E-4 0.0 2.9146013073152704E-5 0.0 6 0.0 1.4573006536576353E-4 0.0 2.9146013073152704E-5 0.0 7 0.0 1.6030307190233986E-4 0.0 4.3719019609729055E-5 0.0 8 0.0 2.0402209151206894E-4 0.0 5.829202614630541E-5 0.0 9 0.0 2.4774111112179796E-4 0.0 8.743803921945811E-5 0.0 10-11 0.0 2.4774111112179796E-4 0.0 1.0201104575603447E-4 0.0 12-13 0.0 2.4774111112179796E-4 0.0 1.3115705882918717E-4 0.0 14-15 0.0 2.7688712419495073E-4 0.0 1.8944908497549258E-4 0.0 16-17 0.0 2.9146013073152706E-4 0.0 1.9673558824378075E-4 0.0 18-19 0.0 3.206061438046797E-4 0.0 2.2588160131693346E-4 0.0 20-21 0.0 3.934711764875615E-4 0.0 2.404546078535098E-4 0.0 22-23 0.0 4.371901960972906E-4 0.0 2.4774111112179796E-4 0.0 24-25 0.0 4.881957189753078E-4 0.0 2.623141176583743E-4 0.0 26-27 0.0 5.100552287801724E-4 0.0 2.9146013073152706E-4 0.0 28-29 0.0 5.319147385850369E-4 0.0 5.902067647313423E-4 0.0 30-31 0.0 6.703583006825122E-4 0.0 0.0015957442157551105 0.0 32-33 0.0 6.703583006825122E-4 0.0 0.0035558135949246296 0.0 34-35 0.0 8.233748693165639E-4 0.0 0.005865635130971982 0.0 36-37 0.0 9.982509477554802E-4 0.0 0.009800346895847595 0.0 38-39 0.0 0.001034683464096921 0.0 0.015651409020283003 0.0 40-41 0.0 0.0011075484967798027 0.0 0.022566300621888483 0.0 42-43 1.4573006536576352E-5 0.0011366945098529556 0.0 0.028701536373787126 0.0 44-45 1.4573006536576352E-5 0.0012532785621455662 0.0 0.03603175866168503 0.0 46-47 1.4573006536576352E-5 0.0013261435948284481 0.0 0.04413435029602149 0.0 48-49 1.4573006536576352E-5 0.0013480031046333126 0.0 0.05205477934865073 0.0 50-51 1.4573006536576352E-5 0.0014645871569259235 0.0 0.05992420287840196 0.0 52-53 1.4573006536576352E-5 0.0014718736601942116 0.0 0.06818709758464075 0.0 54-55 1.4573006536576352E-5 0.0015083061765356525 0.0 0.07525500575488028 0.0 56-57 1.4573006536576352E-5 0.0015447386928770933 0.0 0.08141938751985207 0.0 58-59 1.4573006536576352E-5 0.0015957442157551105 0.0 0.08735060118023866 0.0 60-61 1.4573006536576352E-5 0.0016394632353648397 0.0 0.09351498294521045 0.0 62-63 1.4573006536576352E-5 0.0016758957517062805 0.0 0.09969393771671883 0.0 64-65 1.4573006536576352E-5 0.0017924798039988914 0.0 0.10611334709608071 0.0 66-67 1.4573006536576352E-5 0.0018143393138037559 0.0 0.11254004297871087 0.0 68-69 1.4573006536576352E-5 0.0018361988236086204 0.0 0.11888658732538987 0.0 70-71 1.4573006536576352E-5 0.0018507718301451967 0.0 0.12455548686811808 0.0 72-73 1.4573006536576352E-5 0.001865344836681773 0.0 0.12895653484216413 0.0 74-75 1.4573006536576352E-5 0.0019017773530232139 0.0 0.1324759159207473 0.0 76-77 1.4573006536576352E-5 0.001981928888974384 0.0 0.13566011784898924 0.0 78-79 1.4573006536576352E-5 0.0020110749020475368 0.0 0.13783149582293913 0.0 80-81 1.4573006536576352E-5 0.0020110749020475368 0.0 0.13852371363342653 0.0 82-83 1.4573006536576352E-5 0.002025647908584113 0.0 0.1389609038295238 0.0 84-85 1.4573006536576352E-5 0.0020912264379987066 0.0 0.1391503529144993 0.0 86-87 1.4573006536576352E-5 0.0021422319608767238 0.0 0.13928879647659675 0.0 88 1.4573006536576352E-5 0.0021859509804864528 0.0 0.13930336948313335 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 7400 0.0 46.73681 1 GTATCAA 13405 0.0 36.952827 1 TCAACGC 15260 0.0 31.51164 4 ATCAACG 15285 0.0 31.432465 3 CAACGCA 15475 0.0 30.991266 5 AACGCAG 16140 0.0 29.714365 6 TATCAAC 16440 0.0 29.560966 2 ACGCAGA 18760 0.0 25.58701 7 CGCAGAG 18780 0.0 25.5144 8 GTACATG 17795 0.0 22.06824 1 TACATGG 17765 0.0 21.602018 2 GCAGAGT 22645 0.0 21.234892 9 ACATGGG 17720 0.0 20.551199 3 GAGTACT 13240 0.0 19.301527 12-13 CAGAGTA 22055 0.0 18.684107 10-11 AGAGTAC 20200 0.0 18.259754 10-11 CATGGGG 13290 0.0 18.171455 4 GTACTTT 15685 0.0 16.333689 14-15 AGTACTT 15020 0.0 15.170933 12-13 CGTCGAA 350 0.003669329 15.052679 94 >>END_MODULE