##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2138670_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 8531745 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.645827201820964 33.0 33.0 33.0 33.0 33.0 2 32.65201878396506 33.0 33.0 33.0 33.0 33.0 3 32.6517462723042 33.0 33.0 33.0 33.0 33.0 4 36.564930972503284 37.0 37.0 37.0 37.0 37.0 5 36.58694417144441 37.0 37.0 37.0 37.0 37.0 6 36.57103171742709 37.0 37.0 37.0 37.0 37.0 7 36.53402510271931 37.0 37.0 37.0 37.0 37.0 8 36.5354820145234 37.0 37.0 37.0 37.0 37.0 9 36.574322837825086 37.0 37.0 37.0 37.0 37.0 10-11 36.49979265671911 37.0 37.0 37.0 37.0 37.0 12-13 36.49961420553474 37.0 37.0 37.0 37.0 37.0 14-15 38.60896522340975 40.0 37.0 40.0 37.0 40.0 16-17 38.552022358849214 40.0 37.0 40.0 37.0 40.0 18-19 38.567646184924655 40.0 37.0 40.0 37.0 40.0 20-21 38.55027631453076 40.0 37.0 40.0 37.0 40.0 22-23 38.55993169435658 40.0 37.0 40.0 37.0 40.0 24-25 38.54710842917747 40.0 37.0 40.0 37.0 40.0 26-27 38.451641790224194 40.0 37.0 40.0 37.0 40.0 28-29 38.39213002628354 40.0 37.0 40.0 37.0 40.0 30-31 38.34077180145398 40.0 37.0 40.0 37.0 40.0 32-33 38.278260180754685 40.0 37.0 40.0 37.0 40.0 34-35 38.24365293094465 40.0 37.0 40.0 37.0 40.0 36-37 38.19246268713841 40.0 37.0 40.0 37.0 40.0 38-39 38.1445083915358 40.0 37.0 40.0 37.0 40.0 40-41 38.11181409175829 40.0 37.0 40.0 37.0 40.0 42-43 38.0579519461719 40.0 37.0 40.0 33.0 40.0 44-45 37.992613095721815 40.0 37.0 40.0 33.0 40.0 46-47 37.95568408487405 40.0 37.0 40.0 33.0 40.0 48-49 37.93434494269752 40.0 37.0 40.0 33.0 40.0 50-51 37.85998359035571 40.0 37.0 40.0 33.0 40.0 52-53 37.755265760516785 40.0 37.0 40.0 33.0 40.0 54-55 37.56197275692341 40.0 37.0 40.0 33.0 40.0 56-57 37.486851658315345 40.0 37.0 40.0 33.0 40.0 58-59 37.37206397936461 40.0 37.0 40.0 33.0 40.0 60-61 37.23824243670508 37.0 37.0 40.0 33.0 40.0 62-63 37.076673619540216 37.0 37.0 40.0 33.0 40.0 64-65 36.892745351758904 37.0 37.0 40.0 33.0 40.0 66-67 36.691507515926645 37.0 37.0 40.0 33.0 40.0 68-69 36.4906064256091 37.0 37.0 40.0 33.0 40.0 70-71 36.224586800682125 37.0 37.0 40.0 33.0 40.0 72-73 36.003501025976696 37.0 37.0 37.0 33.0 40.0 74-75 35.808999452076854 37.0 37.0 37.0 33.0 40.0 76-77 34.17643098938423 35.0 33.0 37.0 30.0 37.0 78-79 35.26046837883456 37.0 33.0 37.0 33.0 37.0 80-81 35.304596728663384 37.0 33.0 37.0 33.0 37.0 82-83 35.180049806579916 37.0 33.0 37.0 33.0 37.0 84-85 35.01386806995119 37.0 33.0 37.0 33.0 37.0 86-87 34.93115503403966 37.0 33.0 37.0 33.0 37.0 88-89 34.83001464929204 37.0 33.0 37.0 33.0 37.0 90-91 34.71878898292378 37.0 33.0 37.0 33.0 37.0 92-93 34.68875781870032 37.0 33.0 37.0 33.0 37.0 94-95 34.71643821896255 37.0 33.0 37.0 33.0 37.0 96-97 34.70651988263351 37.0 33.0 37.0 33.0 37.0 98-99 34.69723539244575 37.0 33.0 37.0 33.0 37.0 100 34.70938199999609 37.0 33.0 37.0 33.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 4.0 19 5.0 20 55.0 21 312.0 22 1155.0 23 3295.0 24 7540.0 25 14982.0 26 26453.0 27 41245.0 28 61323.0 29 85661.0 30 116077.0 31 154370.0 32 204357.0 33 274309.0 34 377570.0 35 553355.0 36 977238.0 37 2441647.0 38 3125739.0 39 65052.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.32012853173647 20.56229997497581 14.509763243041137 23.607808250246578 2 14.43389365247086 21.2218367989198 41.89464171749155 22.449627831117784 3 17.633110225399378 26.714734207363204 30.784194792507275 24.86796077473014 4 12.07837318157071 18.519177495342394 39.505997893748585 29.89645142933831 5 12.993637292253812 38.17719587259113 35.91700173880021 12.91216509635485 6 29.27888298465869 38.530704653777384 19.16429434759819 13.02611801396574 7 26.22234958967948 32.91450928268485 23.48117530470027 17.381965822935403 8 24.384390297647197 36.7721257491873 21.331814300591496 17.511669652574007 9 25.678932035591778 16.735544721507733 21.131316043787056 36.45420719911343 10-11 23.907353180089043 26.85935863013641 29.33970102101649 19.89358716875806 12-13 25.00010841864318 24.401959833998752 29.189645070180852 21.40828667717722 14-15 22.04090832794928 25.87814756086011 26.78357093493095 25.297373176259658 16-17 21.546787907983653 29.01597504379233 27.449050575234025 21.988186472989995 18-19 21.554312746102937 28.08677474537741 29.23190390711396 21.12700860140569 20-21 22.377351889115403 27.23599899080738 29.102747471231122 21.283901648846097 22-23 22.09237575526618 27.25507883557356 28.96270672582883 21.689838683331427 24-25 21.913029246591936 27.42530022150354 29.01338804750787 21.648282484396653 26-27 21.79189219156107 27.606991163741583 28.946569604891703 21.654547039805642 28-29 21.64926684978559 27.580401934890137 29.077572155131403 21.692759060192866 30-31 21.98711628212713 27.426818933055376 28.869558225577745 21.716506559239747 32-33 21.885129680176266 27.545750145753118 28.885509640034595 21.683610534036017 34-35 21.940481909492892 27.679686426699384 28.85366824455493 21.526163419252786 36-37 21.907385601749883 27.595266585855384 28.712676512343528 21.784671300051205 38-39 21.784587507187602 27.637153198105498 28.860736388947732 21.71752290575916 40-41 21.97352206488663 27.55764749524825 28.77261003209975 21.69622040776537 42-43 21.970619608965368 27.585247404452783 28.614282464532153 21.829850522049696 44-45 21.9927112414844 27.778195461963996 28.376060033120066 21.85303326343154 46-47 22.10435589936202 27.7036635917021 28.03068223236015 22.16129827657573 48-49 22.058318900446892 27.848963487125673 28.043234432530838 22.0494831798966 50-51 22.06870836765102 27.921120877897724 27.937798727938755 22.072372026512497 52-53 22.14641574304467 27.924708758664362 27.90070671794179 22.028168780349176 54-55 22.17762741907999 27.86860786006486 27.84679998007327 22.10696474078188 56-57 22.22405402201342 27.964459525829355 27.726681375122592 22.084805077034638 58-59 22.05586651116066 28.087391271992168 27.88233310025593 21.974409116591243 60-61 22.225133477854452 28.126028692073895 27.698484968458835 21.95035286161281 62-63 22.105844019668908 28.219450434913252 27.654241617082278 22.02046392833556 64-65 22.11515606503087 28.12306835598043 27.70077559491881 22.06099998406989 66-67 22.195910683806826 28.04563925062238 27.60465854268083 22.15379152288996 68-69 22.15456943303624 27.995009157742757 27.719900616808413 22.130520792412593 70-71 22.15771737605453 27.83658340631712 27.739401476893207 22.266297740735144 72-73 22.193786068026984 27.887347615169656 27.682410946077784 22.236455370725576 74-75 22.119352411645544 28.01790966146876 27.630501030294386 22.232236896591314 76-77 22.17208235871774 27.968895106418106 27.612349894256266 22.246672640607883 78-79 22.17874376652847 27.950175982970254 27.56071498139217 22.310365269109102 80-81 22.1476021213787 28.017925999279047 27.582531167618146 22.251940711724107 82-83 22.18114559291922 27.97682293892207 27.662257797924887 22.17977367023382 84-85 22.30440517853804 27.965223779961505 27.5474213210652 22.18294972043525 86-87 22.151714201828163 28.0164316143651 27.622827514364335 22.2090266694424 88-89 22.20529059921613 27.89223664726964 27.659858013175377 22.242614740338855 90-91 22.23969133612038 27.972109637498754 27.564829394870205 22.22336963151066 92-93 22.234960279254818 28.0043335542415 27.575369677979772 22.185336488523912 94-95 22.104099358318418 27.993167641651535 27.671944189178998 22.230788810851045 96-97 22.180237054396322 28.114225967821895 27.721216819144622 21.984320158637164 98-99 22.33737777475534 28.82264423844599 26.846002258240496 21.993975728558173 100 20.45644015050795 28.566035460808443 27.997638973061527 22.97988541562208 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1819.0 1 1563.5 2 2036.5 3 2960.5 4 3967.0 5 6358.0 6 8366.0 7 9664.0 8 10420.0 9 10250.5 10 9483.5 11 8707.0 12 9719.5 13 13042.5 14 20594.5 15 31299.0 16 40436.0 17 45927.5 18 46991.0 19 44041.5 20 38967.0 21 33639.0 22 30310.0 23 30891.5 24 35150.0 25 43743.0 26 56257.5 27 70500.5 28 87827.0 29 107901.5 30 127800.0 31 148976.5 32 172095.0 33 195465.5 34 219710.0 35 241628.5 36 263320.5 37 282399.5 38 293866.5 39 304773.5 40 316733.0 41 325300.0 42 328944.5 43 333017.5 44 337718.5 45 341776.0 46 342560.5 47 340436.0 48 342389.0 49 339300.5 50 328756.0 51 318388.0 52 304598.0 53 283433.0 54 260800.0 55 238835.0 56 216077.0 57 191915.5 58 167755.0 59 145448.5 60 121155.5 61 97283.5 62 76552.5 63 58491.5 64 42999.0 65 31161.0 66 23032.0 67 17379.5 68 13179.0 69 9519.5 70 6858.0 71 5082.5 72 3679.5 73 2583.0 74 1819.0 75 1249.5 76 826.5 77 518.0 78 312.0 79 212.0 80 148.0 81 99.0 82 72.5 83 48.5 84 34.0 85 28.0 86 20.5 87 13.0 88 8.5 89 5.5 90 3.5 91 3.0 92 2.5 93 1.5 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 1.0548838484975816E-4 7 0.0 8 0.0 9 0.0 10-11 0.005192372720938096 12-13 2.344186329994626E-5 14-15 0.00441879123203987 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86-87 0.0 88-89 0.0 90-91 0.0 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 103.0 20-21 426.0 22-23 924.0 24-25 2219.0 26-27 2661.0 28-29 4203.0 30-31 8575.0 32-33 11017.0 34-35 15410.0 36-37 20712.0 38-39 26176.0 40-41 29794.0 42-43 38527.0 44-45 47160.0 46-47 46049.0 48-49 39578.0 50-51 34596.0 52-53 34547.0 54-55 39153.0 56-57 43218.0 58-59 43447.0 60-61 44989.0 62-63 45684.0 64-65 48328.0 66-67 51692.0 68-69 49329.0 70-71 50125.0 72-73 49082.0 74-75 51069.0 76-77 51442.0 78-79 56339.0 80-81 59337.0 82-83 58453.0 84-85 59862.0 86-87 64066.0 88-89 70715.0 90-91 74428.0 92-93 79730.0 94-95 100317.0 96-97 291442.0 98-99 35478.0 100-101 6651343.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 82.2127508829094 #Duplication Level Percentage of deduplicated Percentage of total 1 87.48944536805382 71.9274797692772 2 8.537914768748015 14.038509198851873 3 2.20370526973069 5.435180170791716 4 0.8432172483852087 2.77292838326662 5 0.3664471174415538 1.5063312788991354 6 0.19480120378412444 0.9609085703037054 7 0.10445235418676621 0.6011120761723021 8 0.07097535809614566 0.46680635471869686 9 0.0441267282924479 0.32650017483463645 >10 0.14202021001226925 1.7210741035877706 >50 0.0024075063821144345 0.1300022924599626 >100 4.1325566769193246E-4 0.06622614874770759 >500 4.907440175696101E-5 0.024348398372160778 >1k 2.4536817449150688E-5 0.02259307971655224 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 1.172093164997313E-5 0.0 2 0.0 1.172093164997313E-5 0.0 1.172093164997313E-5 0.0 3 0.0 1.172093164997313E-5 0.0 2.344186329994626E-5 0.0 4 0.0 4.688372659989252E-5 0.0 2.344186329994626E-5 0.0 5 0.0 4.688372659989252E-5 0.0 2.344186329994626E-5 0.0 6 8.20465215498119E-5 4.688372659989252E-5 0.0 2.344186329994626E-5 0.0 7 8.20465215498119E-5 5.860465824986565E-5 0.0 2.344186329994626E-5 0.0 8 8.20465215498119E-5 5.860465824986565E-5 0.0 2.344186329994626E-5 0.0 9 8.20465215498119E-5 1.7581397474959693E-4 0.0 2.344186329994626E-5 0.0 10-11 8.20465215498119E-5 1.7581397474959693E-4 0.0 2.344186329994626E-5 0.0 12-13 8.20465215498119E-5 1.7581397474959693E-4 0.0 2.344186329994626E-5 0.0 14-15 8.20465215498119E-5 2.4613956464943575E-4 0.0 2.9302329124932825E-5 0.0 16-17 2.344186329994626E-4 2.69581427949382E-4 0.0 3.516279494991939E-5 0.0 18-19 2.344186329994626E-4 3.0474422289930136E-4 0.0 3.516279494991939E-5 0.0 20-21 2.4613956464943575E-4 3.457674836742073E-4 0.0 3.516279494991939E-5 0.0 22-23 2.4613956464943575E-4 4.5711633434895204E-4 0.0 3.516279494991939E-5 0.0 24-25 2.4613956464943575E-4 5.567442533737237E-4 0.0 4.688372659989252E-5 0.0 26-27 2.4613956464943575E-4 5.977675141486296E-4 0.0 5.860465824986565E-5 0.0 28-29 2.4613956464943575E-4 5.977675141486296E-4 0.0 1.1134885067474474E-4 0.0 30-31 2.4613956464943575E-4 6.915349673484146E-4 0.0 2.813023595993551E-4 0.0 32-33 2.4613956464943575E-4 6.973954331734012E-4 0.0 6.563721723984953E-4 0.0 34-35 2.4613956464943575E-4 8.028838180231593E-4 0.0 0.0012189768915972054 0.0 36-37 2.4613956464943575E-4 9.02511737047931E-4 0.0 0.0021214886286451363 1.172093164997313E-5 38-39 2.4613956464943575E-4 9.259536003478773E-4 0.0 0.0037506981279914016 1.172093164997313E-5 40-41 2.4613956464943575E-4 0.0010548838484975816 0.0 0.0054092099564626 1.172093164997313E-5 42-43 2.520000304744223E-4 0.0010724652459725413 0.0 0.0071849311014335285 1.172093164997313E-5 44-45 2.8130235959935516E-4 0.0012013954941222458 0.0 0.009189210413578935 1.172093164997313E-5 46-47 2.9302329124932826E-4 0.0013127443447969905 0.0 0.011386885097948895 1.172093164997313E-5 48-49 2.9302329124932826E-4 0.0013244652764469636 0.0 0.014217490091417406 1.172093164997313E-5 50-51 3.2232562037426106E-4 0.0015588839094464262 0.0 0.016590978750536965 1.172093164997313E-5 52-53 3.281860861992476E-4 0.0015706048410963993 0.0 0.019128560452756148 1.172093164997313E-5 54-55 3.281860861992476E-4 0.0015764653069213859 0.0 0.021824374732249966 1.172093164997313E-5 56-57 3.281860861992476E-4 0.0015940467043963457 0.0 0.025047630935992576 1.172093164997313E-5 58-59 3.281860861992476E-4 0.0016057676360463188 0.0 0.02838809645623492 1.172093164997313E-5 60-61 3.5162794949919387E-4 0.0016233490335212785 0.0 0.031412096821927984 1.172093164997313E-5 62-63 3.9851167609908643E-4 0.001711256020896077 0.0 0.03457674836742074 1.172093164997313E-5 64-65 3.9851167609908643E-4 0.002021860709620365 0.0 0.03779414410533836 1.172093164997313E-5 66-67 4.1023260774905953E-4 0.0020511630387452977 0.0 0.04141005151935507 1.172093164997313E-5 68-69 4.1023260774905953E-4 0.00209804676534519 0.0 0.045178331044821426 1.172093164997313E-5 70-71 4.1609307357404614E-4 0.0021214886286451363 0.0 0.04889386637786291 1.172093164997313E-5 72-73 4.6297680017393864E-4 0.0021449304919450825 0.0 0.051771355097931314 1.172093164997313E-5 74-75 4.688372659989252E-4 0.002232837479319881 0.0 0.0542210298127757 1.172093164997313E-5 76-77 4.688372659989252E-4 0.0023793491249445454 0.0 0.05644800682627059 1.172093164997313E-5 78-79 4.688372659989252E-4 0.0024027909882444916 0.0 0.0578838209533923 1.172093164997313E-5 80-81 4.688372659989252E-4 0.0024145119198944647 0.0 0.058458146604240986 1.172093164997313E-5 82-83 4.688372659989252E-4 0.0024320933173694243 0.0 0.058932844336064896 1.172093164997313E-5 84-85 4.688372659989252E-4 0.002449674714844384 0.0 0.05909693737916452 1.172093164997313E-5 86-87 4.8055819764889835E-4 0.0024848375097943037 0.0 0.05913210017411444 1.172093164997313E-5 88 5.040000609488446E-4 0.0025903258946440616 0.0 0.05913210017411444 1.172093164997313E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 10640 0.0 49.792637 1 GTATCAA 19420 0.0 37.624805 1 ATCAACG 23220 0.0 30.858994 3 TCAACGC 23305 0.0 30.689793 4 CAACGCA 23780 0.0 29.987278 5 AACGCAG 24585 0.0 29.20295 6 TATCAAC 24975 0.0 28.920332 2 ACGCAGA 27915 0.0 25.65604 7 CGCAGAG 28410 0.0 25.240847 8 GTACATG 25860 0.0 22.31375 1 TACATGG 25505 0.0 22.053097 2 CTTATAC 5330 0.0 21.867655 1 GCAGAGT 33625 0.0 21.104658 9 ACATGGG 26040 0.0 20.92183 3 GAGTACT 19390 0.0 20.004965 12-13 AGAGTAC 30650 0.0 19.25582 10-11 CATGGGG 19025 0.0 18.727375 4 TATACAC 8190 0.0 18.651669 3 CAGAGTA 32945 0.0 18.631542 10-11 GTACTTT 21900 0.0 17.732372 14-15 >>END_MODULE